File Info

Filename
tih_rna_sample_00332_23LGNLLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0005/A23LGNLLT4/nfcore_rnafusion_100M__5f1fa79--20260304-095416/starfusion/tih_rna_sample_00332_23LGNLLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
Size
937 bytes
Workflow Run
dev_rna_exp0005_5f1fa79
Published
Mar 09, 2026 6:00 PM

Content

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STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: tih_rna_sample_00332_23LGNLLT4_1.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: tih_rna_sample_00332_23LGNLLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 519
Pass (CALL=1): 0 (0.0%)
Fail (CALL=0): 519 (100.0%)

Blacklist Flagging:
  Total blacklisted: 28
  All blacklisted fusions have CALL=0

Failure Reasons:
  Excluded SpliceType: INCL_NON_REF_SPLICE: 306
  Read count too low: 1 < 5: 172
  Blacklisted: 28
  Read count too low: 2 < 5: 6
  Excluded annotation pattern: HGNC_GENEFAM: 4
  Excluded annotation pattern: GTEx_recurrent_StarF2019: 3

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 0 pass, 319 fail (total: 319)
  ONLY_REF_SPLICE: 0 pass, 200 fail (total: 200)