FastQCFastQC Report
Wed 4 Mar 2026
NTC_0001_0001_23KKJ7LT4_1_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameNTC_0001_0001_23KKJ7LT4_1_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6189071
Total Bases934.5 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC96

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG554426489.58152200871504No Hit
AGATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTATGAGTCTGTGTGTAGA428180.6918324252541295Illumina Single End PCR Primer 1 (97% over 34bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG90380.14603160959051853No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA83700.1352383903820137No Hit
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC79120.12783824906839816No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)