File Info
- Filename
- FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.attempt1.command.log
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008/B23LG7FLT4/nfcore_rnafusion_100M__1bb6229e--20260226-142939/QC/preseq/log/FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.attempt1.command.log
- Size
- 10.6 KB
- Workflow Run
- dev_rna_exp0008_1bb6229e
- Published
- Feb 26, 2026 11:24 PM
Content
View in new tabPAIRED_END_BAM_INPUT Processed 1000000 records Processed 2000000 records Processed 3000000 records Processed 4000000 records Processed 5000000 records Processed 6000000 records Processed 7000000 records Processed 8000000 records Processed 9000000 records Processed 10000000 records Processed 11000000 records Processed 12000000 records Processed 13000000 records Processed 14000000 records Processed 15000000 records Processed 16000000 records Processed 17000000 records Processed 18000000 records Processed 19000000 records Processed 20000000 records Processed 21000000 records Processed 22000000 records Processed 23000000 records Processed 24000000 records Processed 25000000 records Processed 26000000 records Processed 27000000 records Processed 28000000 records Processed 29000000 records Processed 30000000 records Processed 31000000 records Processed 32000000 records Processed 33000000 records Processed 34000000 records Processed 35000000 records Processed 36000000 records Processed 37000000 records Processed 38000000 records Processed 39000000 records Processed 40000000 records Processed 41000000 records Processed 42000000 records Processed 43000000 records Processed 44000000 records Processed 45000000 records Processed 46000000 records Processed 47000000 records Processed 48000000 records Processed 49000000 records Processed 50000000 records Processed 51000000 records Processed 52000000 records Processed 53000000 records Processed 54000000 records Processed 55000000 records Processed 56000000 records Processed 57000000 records Processed 58000000 records Processed 59000000 records Processed 60000000 records Processed 61000000 records Processed 62000000 records Processed 63000000 records Processed 64000000 records Processed 65000000 records Processed 66000000 records Processed 67000000 records Processed 68000000 records Processed 69000000 records Processed 70000000 records Processed 71000000 records Processed 72000000 records Processed 73000000 records Processed 74000000 records Processed 75000000 records Processed 76000000 records Processed 77000000 records Processed 78000000 records Processed 79000000 records Processed 80000000 records Processed 81000000 records Processed 82000000 records Processed 83000000 records Processed 84000000 records Processed 85000000 records Processed 86000000 records Processed 87000000 records Processed 88000000 records Processed 89000000 records Processed 90000000 records Processed 91000000 records Processed 92000000 records Processed 93000000 records Processed 94000000 records Processed 95000000 records Processed 96000000 records Processed 97000000 records Processed 98000000 records Processed 99000000 records Processed 100000000 records Processed 101000000 records Processed 102000000 records Processed 103000000 records Processed 104000000 records Processed 105000000 records Processed 106000000 records Processed 107000000 records Processed 108000000 records Processed 109000000 records Processed 110000000 records Processed 111000000 records Processed 112000000 records Processed 113000000 records Processed 114000000 records Processed 115000000 records Processed 116000000 records Processed 117000000 records Processed 118000000 records Processed 119000000 records Processed 120000000 records Processed 121000000 records Processed 122000000 records Processed 123000000 records Processed 124000000 records Processed 125000000 records Processed 126000000 records Processed 127000000 records Processed 128000000 records Processed 129000000 records Processed 130000000 records Processed 131000000 records Processed 132000000 records Processed 133000000 records Processed 134000000 records Processed 135000000 records Processed 136000000 records Processed 137000000 records Processed 138000000 records Processed 139000000 records Processed 140000000 records Processed 141000000 records Processed 142000000 records Processed 143000000 records Processed 144000000 records Processed 145000000 records Processed 146000000 records Processed 147000000 records Processed 148000000 records Processed 149000000 records Processed 150000000 records Processed 151000000 records Processed 152000000 records Processed 153000000 records Processed 154000000 records Processed 155000000 records Processed 156000000 records Processed 157000000 records Processed 158000000 records Processed 159000000 records Processed 160000000 records Processed 161000000 records Processed 162000000 records Processed 163000000 records Processed 164000000 records Processed 165000000 records Processed 166000000 records Processed 167000000 records Processed 168000000 records Processed 169000000 records Processed 170000000 records Processed 171000000 records Processed 172000000 records Processed 173000000 records Processed 174000000 records Processed 175000000 records Processed 176000000 records Processed 177000000 records Processed 178000000 records Processed 179000000 records Processed 180000000 records Processed 181000000 records Processed 182000000 records Processed 183000000 records Processed 184000000 records Processed 185000000 records Processed 186000000 records Processed 187000000 records Processed 188000000 records Processed 189000000 records Processed 190000000 records Processed 191000000 records Processed 192000000 records Processed 193000000 records Processed 194000000 records Processed 195000000 records paired = 97101803 unpaired = 1598186 MERGED PAIRED END READS = 97101803 MATES PROCESSED = 195801792 TOTAL READS = 98699989 DISTINCT READS = 6.82306e+07 DISTINCT COUNTS = 763 MAX COUNT = 355165 COUNTS OF 1 = 5.27199e+07 MAX TERMS = 100 OBSERVED COUNTS (355166) 1 52719929 2 10569675 3 2770827 4 961824 5 426969 6 226857 7 135693 8 87949 9 61075 10 44099 11 32841 12 25461 13 20524 14 16267 15 13444 16 11019 17 9654 18 8083 19 6931 20 6080 21 5342 22 4629 23 4079 24 3761 25 3472 26 3045 27 2757 28 2448 29 2321 30 2065 31 1885 32 1671 33 1647 34 1540 35 1415 36 1356 37 1227 38 1164 39 1041 40 983 41 939 42 881 43 861 44 779 45 766 46 722 47 694 48 658 49 621 50 609 51 562 52 568 53 471 54 518 55 464 56 457 57 446 58 441 59 399 60 378 61 328 62 391 63 354 64 327 65 302 66 302 67 282 68 255 69 273 70 290 71 267 72 261 73 217 74 229 75 222 76 224 77 183 78 229 79 191 80 203 81 193 82 159 83 171 84 169 85 154 86 172 87 168 88 123 89 147 90 147 91 141 92 133 93 129 94 141 95 118 96 126 97 133 98 122 99 116 100 108 101 105 102 102 103 94 104 87 105 103 106 104 107 86 108 104 109 100 110 94 111 84 112 78 113 84 114 71 115 89 116 92 117 73 118 76 119 64 120 66 121 81 122 78 123 63 124 78 125 65 126 64 127 54 128 63 129 62 130 65 131 66 132 73 133 59 134 51 135 50 136 47 137 53 138 60 139 50 140 52 141 49 142 54 143 62 144 46 145 45 146 44 147 44 148 53 149 52 150 38 151 46 152 30 153 38 154 43 155 39 156 57 157 43 158 33 159 28 160 28 161 31 162 37 163 25 164 28 165 31 166 24 167 39 168 30 169 29 170 28 171 27 172 35 173 23 174 28 175 24 176 43 177 35 178 27 179 36 180 25 181 25 182 23 183 19 184 29 185 16 186 28 187 19 188 28 189 25 190 16 191 29 192 22 193 25 194 24 195 25 196 33 197 21 198 29 199 23 200 20 201 22 202 16 203 11 204 18 205 14 206 15 207 17 208 12 209 20 210 21 211 18 212 16 213 16 214 22 215 14 216 16 217 15 218 8 219 20 220 20 221 19 222 13 223 11 224 10 225 22 226 17 227 17 228 11 229 18 230 9 231 21 232 20 233 11 234 15 235 3 236 14 237 15 238 9 239 13 240 9 241 11 242 10 243 8 244 18 245 14 246 11 247 13 248 14 249 12 250 1 251 8 252 14 253 15 254 5 255 10 256 7 257 9 258 8 259 11 260 11 261 6 262 9 263 2 264 12 265 12 266 6 267 7 268 16 269 9 270 10 271 3 272 17 273 13 274 15 275 7 276 11 277 7 278 6 279 8 280 5 281 10 282 7 283 10 284 3 285 9 286 13 287 18 288 5 289 9 290 7 291 7 292 7 293 11 294 11 295 10 296 8 297 7 298 8 299 3 300 8 301 6 302 4 303 9 304 4 305 3 306 5 307 4 308 7 309 4 310 4 311 5 312 2 313 6 314 4 315 9 316 10 317 7 318 5 319 6 320 2 321 2 322 6 323 1 324 6 325 3 326 7 327 5 328 7 329 8 330 6 331 10 332 6 333 4 334 5 335 6 336 3 337 5 338 3 339 2 340 2 341 4 342 11 343 5 344 4 345 8 346 3 347 4 348 5 349 5 350 5 351 4 352 4 353 4 354 3 355 1 356 5 357 2 358 4 359 5 360 5 361 4 362 9 363 2 364 5 365 7 366 5 367 2 368 2 369 2 370 4 371 5 372 5 373 2 374 2 375 4 376 2 377 3 378 2 379 6 380 1 381 6 382 1 383 4 384 3 385 2 386 2 387 8 388 3 389 5 390 4 392 5 393 4 394 2 396 4 397 6 398 2 399 2 400 1 401 3 402 3 403 4 404 3 406 3 407 5 408 4 409 3 410 1 411 5 412 3 413 5 414 2 415 3 416 5 417 1 418 4 419 3 420 1 421 1 422 2 423 3 426 1 427 3 428 2 429 1 430 2 431 1 432 1 433 1 434 3 435 5 436 5 437 2 438 2 439 4 440 3 441 4 442 2 443 4 444 1 445 2 446 3 447 3 448 2 449 2 450 3 451 2 453 5 454 1 455 6 457 2 458 2 459 1 461 2 462 2 463 6 464 2 465 3 466 3 467 5 468 1 469 3 470 3 471 1 472 5 474 1 475 1 476 3 477 4 478 2 479 2 481 3 482 3 483 1 484 1 485 1 486 2 487 3 488 3 489 2 490 4 491 3 494 1 496 1 497 2 498 3 499 1 500 1 501 3 502 1 503 1 504 2 505 2 507 1 508 2 509 4 510 4 511 2 512 2 513 1 514 1 515 1 516 1 517 4 518 1 519 3 520 1 521 1 523 1 524 1 525 3 526 2 527 3 528 1 529 3 530 1 531 2 532 2 533 3 536 2 537 2 539 3 544 2 545 2 548 4 550 2 551 1 552 1 553 1 554 1 556 1 557 1 558 1 559 1 560 2 561 1 562 3 563 1 566 1 568 1 569 1 570 1 571 2 572 1 573 3 574 1 575 2 576 1 577 1 578 1 579 1 581 1 582 2 584 1 585 1 586 1 587 4 588 1 590 1 594 1 598 2 599 2 600 2 601 1 602 2 603 1 604 2 605 1 608 2 612 3 617 1 618 1 626 1 627 2 628 1 630 1 631 1 632 1 633 1 636 1 637 1 638 1 639 1 640 1 641 2 642 2 643 1 644 1 645 4 647 1 649 1 650 1 651 2 652 1 655 1 658 2 662 1 663 1 664 1 668 1 670 1 674 1 678 4 679 1 680 2 687 1 688 1 689 1 692 1 693 2 695 1 696 1 700 3 702 1 703 1 705 1 706 1 707 1 708 2 714 1 715 1 721 2 725 2 729 1 732 2 734 1 735 1 738 1 747 2 749 1 751 2 753 1 754 1 757 1 759 1 763 1 766 2 769 1 774 2 775 3 776 1 777 1 779 1 780 2 782 1 785 1 790 1 797 1 803 1 807 1 811 1 812 2 816 1 817 1 821 2 825 1 826 1 829 1 831 1 838 1 845 1 847 1 853 1 854 1 861 1 867 1 868 1 872 1 876 1 882 1 897 2 900 1 904 1 907 1 911 1 916 1 917 1 918 1 921 1 927 1 932 1 935 1 936 1 951 1 961 1 963 1 966 1 968 1 972 1 990 1 991 1 994 1 1011 1 1018 1 1024 1 1029 1 1031 1 1038 1 1043 1 1055 1 1065 1 1070 1 1071 1 1090 1 1100 1 1103 1 1104 1 1107 1 1112 1 1116 1 1125 1 1135 1 1138 1 1144 1 1157 1 1166 1 1169 1 1204 1 1205 1 1220 1 1231 1 1238 1 1242 1 1245 1 1261 1 1276 2 1294 1 1317 1 1324 1 1330 1 1340 1 1395 1 1402 1 1425 1 1443 1 1450 1 1473 1 1492 1 1507 1 1508 1 1522 1 1533 1 1585 1 1618 1 1663 1 1725 1 1730 1 1771 1 1789 1 1820 1 1879 1 2148 1 2287 1 2333 1 3107 1 3211 1 3291 1 3420 1 3467 1 3773 1 4375 1 6857 1 11931 1 355165 1 [ESTIMATING YIELD CURVE] [BOOTSTRAPPING HISTOGRAM] .._._._..._......._.._......_.._...................._......._..._._..... ._...._.._.._..............__..........._...... [COMPUTING CONFIDENCE INTERVALS] [WRITING OUTPUT]