#FusionName JunctionReadCount SpanningFragCount est_J est_S SpliceType LeftGene LeftBreakpoint RightGene RightBreakpoint LargeAnchorSupport FFPM LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy annots FGFR3--TACC3 1275 6 1275.00 6.00 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ TACC3^ENSG00000013810.20 chr4:1739702:+ YES_LDAS 13.0232 GT 1.8892 AG 1.7819 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","Klijn_CellLines","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr4:0.05Mb]","LOCAL_REARRANGEMENT:+:[48122]"] LMNA--NTRK1 547 14 547.00 14.00 ONLY_REF_SPLICE LMNA^ENSG00000160789.23 chr1:156130773:+ NTRK1^ENSG00000198400.13 chr1:156874906:+ YES_LDAS 5.7034 GT 1.7465 AG 1.5058 ["ChimerKB","ChimerPub","Cosmic","TCGA_StarF2019","INTRACHROMOSOMAL[chr1:0.68Mb]"] TMPRSS2--ERG 541 0 541.00 0.00 ONLY_REF_SPLICE TMPRSS2^ENSG00000184012.14 chr21:41508081:- ERG^ENSG00000157554.19 chr21:38584945:- YES_LDAS 5.5001 GT 1.6895 AG 1.9219 ["ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr21:2.80Mb]"] ETV6--NTRK3 426 2 426.00 2.00 ONLY_REF_SPLICE ETV6^ENSG00000139083.11 chr12:11869969:+ NTRK3^ENSG00000140538.16 chr15:87940753:- YES_LDAS 4.3512 GT 1.7819 AG 1.9656 ["ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","chimerdb_omim","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr12--chr15]"] FGFR3--BAIAP2L1 415 2 415.00 2.00 ONLY_REF_SPLICE FGFR3^ENSG00000068078.20 chr4:1806934:+ BAIAP2L1^ENSG00000006453.14 chr7:98362432:- YES_LDAS 4.2394 GT 1.8892 AG 1.8062 ["ChimerKB","Klijn_CellLines","ChimerPub","Cosmic","CCLE_StarF2019","INTERCHROMOSOMAL[chr4--chr7]"] TPM3--NTRK1 381 2 381.00 2.00 ONLY_REF_SPLICE TPM3^ENSG00000143549.21 chr1:154170400:- NTRK1^ENSG00000198400.13 chr1:156874571:+ YES_LDAS 3.8937 GT 1.9329 AG 1.6895 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","HaasMedCancer","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr1:2.62Mb]"] KIF5B--RET 379 6 379.00 6.00 ONLY_REF_SPLICE KIF5B^ENSG00000170759.11 chr10:32017143:- RET^ENSG00000165731.20 chr10:43114480:+ YES_LDAS 3.9141 GT 1.9656 AG 1.9656 ["ChimerKB","ChimerPub","Cosmic","ChimerSeq","INTRACHROMOSOMAL[chr10:11.02Mb]"] CD74--ROS1 376 5 376.00 5.00 ONLY_REF_SPLICE CD74^ENSG00000019582.16 chr5:150404680:- ROS1^ENSG00000047936.11 chr6:117324415:- YES_LDAS 3.8734 GT 1.7819 AG 1.7465 ["ChimerKB","ChimerSeq","TCGA_StarF2019","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr5--chr6]"] SLC34A2--ROS1 357 13 357.00 13.00 ONLY_REF_SPLICE SLC34A2^ENSG00000157765.13 chr4:25664330:+ ROS1^ENSG00000047936.11 chr6:117324415:- YES_LDAS 3.7616 GT 1.8892 AG 1.7465 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","Klijn_CellLines","GUO2018CR_TCGA","chimerdb_pubmed","ChimerPub","Cosmic","INTERCHROMOSOMAL[chr4--chr6]"] NCOA4--RET 337 4 337.00 4.00 ONLY_REF_SPLICE NCOA4^ENSG00000266412.6 chr10:46012883:- RET^ENSG00000165731.20 chr10:43116584:+ YES_LDAS 3.4668 GT 1.9086 AG 1.8323 ["ChimerKB","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr10:2.87Mb]"] CCDC6--RET 324 2 324.00 2.00 ONLY_REF_SPLICE CCDC6^ENSG00000108091.11 chr10:59906122:- RET^ENSG00000165731.20 chr10:43116584:+ YES_LDAS 3.3142 GT 1.8892 AG 1.8323 ["Mitelman","ChimerKB","Larsson_TCGA","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr10:16.66Mb]"] IGH-@-ext--HSD11B1L 271 0 271.00 0.00 INCL_NON_REF_SPLICE IGH-@-ext^IGH-.g@-ext chr14:105864635:+ HSD11B1L^ENSG00000167733.14 chr19:5688337:+ NO_LDAS 2.7551 AC 1.8295 TG 1.5301 ["INTERCHROMOSOMAL[chr14--chr19]"] IGH@-ext--GPR173 224 0 223.95 0.00 INCL_NON_REF_SPLICE IGH@-ext^IGH.g@-ext chr14:106537812:- GPR173^ENSG00000184194.6 chrX:53049052:+ NO_LDAS 2.2768 GA 1.9329 GC 1.0530 ["INTERCHROMOSOMAL[chr14--chrX]"] PAX8--PPARG 173 1 173.00 1.00 ONLY_REF_SPLICE PAX8^ENSG00000125618.18 chr2:113235394:- PPARG^ENSG00000132170.23 chr3:12379704:+ YES_LDAS 1.769 GT 1.8295 AG 1.9329 ["Mitelman","ChimerKB","ChimerSeq","TCGA_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","chimerdb_pubmed","chimerdb_omim","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr2--chr3]"] SLC45A3--BRAF 160 0 160.00 0.00 ONLY_REF_SPLICE SLC45A3^ENSG00000158715.6 chr1:205680394:- BRAF^ENSG00000157764.14 chr7:140794467:- YES_LDAS 1.6266 GT 1.5628 AG 1.7465 ["ChimerKB","ChimerPub","Cosmic","ChimerSeq","INTERCHROMOSOMAL[chr1--chr7]"] EGFR--SEPTIN14 141 0 141.00 0.00 ONLY_REF_SPLICE EGFR^ENSG00000146648.19 chr7:55200413:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 1.4335 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr7:0.58Mb]"] TFG--NTRK1 129 3 129.00 3.00 ONLY_REF_SPLICE TFG^ENSG00000114354.15 chr3:100732672:+ NTRK1^ENSG00000198400.13 chr1:156874571:+ YES_LDAS 1.342 GT 1.9329 AG 1.6895 ["ChimerKB","ChimerSeq","TCGA_StarF2019","HaasMedCancer","DEEPEST2019","chimerdb_pubmed","TumorFusionsNAR2018","Cosmic","INTERCHROMOSOMAL[chr3--chr1]"] EML4--ALK 113 0 113.00 0.00 ONLY_REF_SPLICE EML4^ENSG00000143924.19 chr2:42295516:+ ALK^ENSG00000171094.18 chr2:29223528:- YES_LDAS 1.1488 GT 1.6895 AG 1.9086 ["ChimerKB","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","YOSHIHARA_TCGA","HaasMedCancer","Klijn_CellLines","chimerdb_pubmed","DEEPEST2019","GUO2018CR_TCGA","ChimerPub","TumorFusionsNAR2018","Cosmic","INTRACHROMOSOMAL[chr2:12.25Mb]"] CHST11--MME 31 0 31.00 0.00 INCL_NON_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104601991:+ MME^ENSG00000196549.13 chr3:155183570:+ NO_LDAS 0.3152 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr3]"] LEPROT--LEPR 26 0 26.00 0.00 ONLY_REF_SPLICE LEPROT^ENSG00000213625.9 chr1:65425378:+ LEPR^ENSG00000116678.20 chr1:65565546:+ YES_LDAS 0.2643 GT 1.8256 AG 1.9219 ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr1:0.09Mb]","NEIGHBORS[89682]"] LILRB1--LILRA5 22 0 22.00 0.00 ONLY_REF_SPLICE LILRB1^ENSG00000104972.15 chr19:54631107:+ LILRA5^ENSG00000187116.14 chr19:54312370:- YES_LDAS 0.2237 GT 1.7819 AG 1.7465 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:0.30Mb]"] CHCHD10--AC005064.1 16 0 16.00 0.00 INCL_NON_REF_SPLICE CHCHD10^ENSG00000250479.9 chr22:23767834:- AC005064.1^ENSG00000234715.2 chr7:103446122:+ NO_LDAS 0.1627 GT 1.6402 AG 1.1589 ["INTERCHROMOSOMAL[chr22--chr7]"] AL139002.1--TMEM200A 16 0 16.00 0.00 ONLY_REF_SPLICE AL139002.1^ENSG00000233379.2 chr13:77975347:- TMEM200A^ENSG00000164484.12 chr6:130440407:+ YES_LDAS 0.1627 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr13--chr6]"] AGAP5--AC022400.4 16 0 16.00 0.00 INCL_NON_REF_SPLICE AGAP5^ENSG00000172650.14 chr10:73692043:- AC022400.4^ENSG00000272140.2 chr10:73713332:- YES_LDAS 0.1627 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr10:0.01Mb]","LOCAL_REARRANGEMENT:-:[5854]"] NPM1--MT-RNR2 14 0 7.00 0.00 INCL_NON_REF_SPLICE NPM1^ENSG00000181163.14 chr5:171391799:+ MT-RNR2^ENSG00000210082.2 chrM:1959:+ YES_LDAS 0.0712 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chrM]"] GNS--HLA-A 13 0 6.50 0.00 INCL_NON_REF_SPLICE GNS^ENSG00000135677.11 chr12:64715124:- HLA-A^ENSG00000206503.13 chr6:29890264:+ NO_LDAS 0.0661 GT 1.6402 AG 1.2729 ["INTERCHROMOSOMAL[chr12--chr6]"] IGL@-ext--MT-RNR2 11 0 5.50 0.00 INCL_NON_REF_SPLICE IGL@-ext^IGL.g@-ext chr22:22919854:+ MT-RNR2^ENSG00000210082.2 chrM:2444:+ YES_LDAS 0.0559 TT 1.9219 TC 1.4566 ["INTERCHROMOSOMAL[chr22--chrM]"] IGL@-ext--MT-RNR2 11 0 5.50 0.00 INCL_NON_REF_SPLICE IGL@-ext^IGL.g@-ext chr22:22906654:+ MT-RNR2^ENSG00000210082.2 chrM:2441:+ YES_LDAS 0.0559 TT 1.9329 TG 1.8892 ["INTERCHROMOSOMAL[chr22--chrM]"] CCDC32--CBX3 11 0 11.00 0.00 INCL_NON_REF_SPLICE CCDC32^ENSG00000128891.16 chr15:40562772:- CBX3^ENSG00000122565.19 chr7:26201769:+ YES_LDAS 0.1118 GT 1.8892 AG 1.3383 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr15--chr7]"] BPTF--DCXR 10 0 5.00 0.00 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ DCXR^ENSG00000169738.8 chr17:82037080:- NO_LDAS 0.0508 GT 1.5628 AG 1.6049 ["INTRACHROMOSOMAL[chr17:14.05Mb]"] BPTF--BSND 10 0 5.00 0.00 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ BSND^ENSG00000162399.9 chr1:55006997:+ NO_LDAS 0.0508 GT 1.5628 AG 1.4256 ["INTERCHROMOSOMAL[chr17--chr1]"] AC008740.1--CRYM-AS1 10 0 9.75 0.00 INCL_NON_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21338921:+ YES_LDAS 0.0991 GT 1.7232 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8102]"] UMAD1--GLCCI1 9 1 9.00 0.90 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7801743:+ GLCCI1^ENSG00000106415.13 chr7:8003908:+ YES_LDAS 0.1006 GT 1.9656 AG 1.7465 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[776]"] IGL-@-ext--ANKRD22 8 0 8.00 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22904990:- ANKRD22^ENSG00000152766.6 chr10:88851799:- NO_LDAS 0.0813 AA 1.5546 GG 1.8892 ["INTERCHROMOSOMAL[chr22--chr10]"] SAMD5--SASH1 7 0 7.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ SASH1^ENSG00000111961.18 chr6:148390134:+ YES_LDAS 0.0712 GT 1.8295 AG 1.9219 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.70Mb]"] FUS--CTNNA1 7 0 7.00 0.00 INCL_NON_REF_SPLICE FUS^ENSG00000089280.19 chr16:31184352:+ CTNNA1^ENSG00000044115.21 chr5:138934073:+ NO_LDAS 0.0712 GT 1.8062 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr5]"] FAM193B--STAT5B 7 0 7.00 0.00 INCL_NON_REF_SPLICE FAM193B^ENSG00000146067.16 chr5:177554489:- STAT5B^ENSG00000173757.10 chr17:42201805:- NO_LDAS 0.0712 GT 1.2310 AG 1.5546 ["INTERCHROMOSOMAL[chr5--chr17]"] ANXA6--FBN3 7 0 7.00 0.00 INCL_NON_REF_SPLICE ANXA6^ENSG00000197043.14 chr5:151124286:- FBN3^ENSG00000142449.13 chr19:8138312:- NO_LDAS 0.0712 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr19]"] VTI1A--AL158212.1 6 0 6.00 0.00 ONLY_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112668998:+ AL158212.1^ENSG00000225292.2 chr10:112888735:+ YES_LDAS 0.061 GT 1.7465 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr10:0.07Mb]","NEIGHBORS[69991]"] AC026191.1--SRGAP3 6 0 6.00 0.00 ONLY_REF_SPLICE AC026191.1^ENSG00000254485.5 chr3:9326010:- SRGAP3^ENSG00000196220.16 chr3:9124917:- YES_LDAS 0.061 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS[42903]"] AC009533.1--MIR4307HG 6 0 4.50 0.00 INCL_NON_REF_SPLICE AC009533.1^ENSG00000111788.10 chr12:9310083:+ MIR4307HG^ENSG00000257612.2 chr14:26881418:+ NO_LDAS 0.0457 GT 1.5656 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr14]"] BX571818.1--TMEM200A 5 0 5.00 0.00 ONLY_REF_SPLICE BX571818.1^ENSG00000285417.1 chr1:206053265:+ TMEM200A^ENSG00000164484.12 chr6:130440407:+ NO_LDAS 0.0508 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr6]"] YAF2--RYBP 4 0 4.00 0.00 INCL_NON_REF_SPLICE YAF2^ENSG00000015153.15 chr12:42238155:- RYBP^ENSG00000163602.11 chr3:72446621:- YES_LDAS 0.0407 GT 1.5656 AG 1.4566 ["INTERCHROMOSOMAL[chr12--chr3]"] SAMD5--AL033504.1 4 0 4.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147947472:+ YES_LDAS 0.0407 GT 1.8295 AG 1.5058 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] RPL17--RPL17P12 4 0 4.00 0.00 INCL_NON_REF_SPLICE RPL17^ENSG00000265681.7 chr18:49491405:- RPL17P12^ENSG00000230559.1 chr2:146194373:+ NO_LDAS 0.0407 GT 1.9219 AG 1.8892 ["TCGA_StarF2019","CCLE_StarF2019","INTERCHROMOSOMAL[chr18--chr2]"] IGL-@-ext--AC022748.1 4 0 2.00 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22899626:- AC022748.1^ENSG00000238166.2 chr15:78753341:+ NO_LDAS 0.0203 AT 1.7465 TC 1.8892 ["INTERCHROMOSOMAL[chr22--chr15]"] HLA-B--ZFYVE28 4 0 4.00 0.00 INCL_NON_REF_SPLICE HLA-B^ENSG00000234745.13 chr6:31354629:- ZFYVE28^ENSG00000159733.14 chr4:2304531:- NO_LDAS 0.0407 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr4]"] EWSR1--DOC2GP 4 0 4.00 0.00 INCL_NON_REF_SPLICE EWSR1^ENSG00000182944.18 chr22:29299721:+ DOC2GP^ENSG00000231793.5 chr11:67613605:- NO_LDAS 0.0407 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr22--chr11]"] CTSC--RAB38 4 0 4.00 0.00 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88300530:- RAB38^ENSG00000123892.12 chr11:88149955:- YES_LDAS 0.0407 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[89626]"] ACTB--HEYL 4 0 2.00 0.00 INCL_NON_REF_SPLICE ACTB^ENSG00000075624.17 chr7:5528004:- HEYL^ENSG00000163909.8 chr1:39624057:- NO_LDAS 0.0203 GT 1.7232 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr1]"] TPTE2--MRPS31P2 3 0 3.00 0.00 ONLY_REF_SPLICE TPTE2^ENSG00000132958.17 chr13:19475573:- MRPS31P2^ENSG00000232894.1 chr13:19570288:- YES_LDAS 0.0305 GT 1.8295 AG 1.9656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","LOCAL_REARRANGEMENT:-:[15809]"] SAMD12-AS1--COLEC10 3 0 3.00 0.00 ONLY_REF_SPLICE SAMD12-AS1^ENSG00000281641.3 chr8:118764384:+ COLEC10^ENSG00000184374.3 chr8:119089680:+ YES_LDAS 0.0305 GT 1.9656 AG 1.5219 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr8:0.09Mb]","NEIGHBORS[89297]"] RPL23AP53--SEPTIN14 3 0 3.00 0.00 ONLY_REF_SPLICE RPL23AP53^ENSG00000223508.5 chr8:232129:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0305 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] MRPS18A--PDC-AS1 3 0 3.00 0.00 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- PDC-AS1^ENSG00000229739.4 chr1:186459293:+ YES_LDAS 0.0305 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] HLA-S--HLA-A 3 0 3.00 0.00 ONLY_REF_SPLICE HLA-S^ENSG00000225851.1 chr6:31382241:- HLA-A^ENSG00000206503.13 chr6:29945451:+ YES_LDAS 0.0305 GT 1.9656 AG 1.9656 ["GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:1.44Mb]"] FBXO25--SEPTIN14 3 0 3.00 0.00 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0305 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] ANXA6--UHRF1 3 0 3.00 0.00 INCL_NON_REF_SPLICE ANXA6^ENSG00000197043.14 chr5:151134460:- UHRF1^ENSG00000276043.5 chr19:4947105:+ NO_LDAS 0.0305 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr19]"] AC008740.1--CRYM-AS1 3 0 3.00 0.00 ONLY_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21315884:+ YES_LDAS 0.0305 GT 1.7232 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8102]"] ZBTB8OS--NUP88 2 0 2.00 0.00 ONLY_REF_SPLICE ZBTB8OS^ENSG00000176261.15 chr1:32650429:- NUP88^ENSG00000108559.12 chr17:5408909:- YES_LDAS 0.0203 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr17]"] YY1--NADK 2 0 2.00 0.00 INCL_NON_REF_SPLICE YY1^ENSG00000100811.14 chr14:100239325:+ NADK^ENSG00000008130.15 chr1:1752933:- NO_LDAS 0.0203 GT 1.9329 AG 0.9183 ["INTERCHROMOSOMAL[chr14--chr1]"] VPS13A--MFF 2 0 2.00 0.00 ONLY_REF_SPLICE VPS13A^ENSG00000197969.14 chr9:77228264:+ MFF^ENSG00000168958.20 chr2:227355677:+ YES_LDAS 0.0203 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr2]"] TOMM5--FAM214A 2 0 2.00 0.00 ONLY_REF_SPLICE TOMM5^ENSG00000175768.13 chr9:37588813:- FAM214A^ENSG00000047346.12 chr15:52678122:- NO_LDAS 0.0203 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr15]"] TNFAIP8--HSD17B4 2 0 2.00 0.00 INCL_NON_REF_SPLICE TNFAIP8^ENSG00000145779.8 chr5:119268907:+ HSD17B4^ENSG00000133835.17 chr5:119412972:+ YES_LDAS 0.0203 GT 1.7232 AG 1.9656 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr5:0.05Mb]","NEIGHBORS[52785]"] TMED3--MINAR1 2 0 2.00 0.00 ONLY_REF_SPLICE TMED3^ENSG00000166557.14 chr15:79314005:+ MINAR1^ENSG00000169330.9 chr15:79456098:+ YES_LDAS 0.0203 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr15:0.00Mb]","NEIGHBORS[4904]"] THAP9--MCM10 2 0 2.00 0.00 INCL_NON_REF_SPLICE THAP9^ENSG00000168152.13 chr4:82919446:+ MCM10^ENSG00000065328.17 chr10:13172628:+ NO_LDAS 0.0203 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr10]"] SS18L1--TAF4 2 0 2.00 0.00 ONLY_REF_SPLICE SS18L1^ENSG00000184402.15 chr20:62143889:+ TAF4^ENSG00000130699.18 chr20:62014707:- YES_LDAS 0.0203 GT 1.6895 AG 1.9329 ["Klijn_CellLines","INTRACHROMOSOMAL[chr20:0.08Mb]","LOCAL_INVERSION:+:-:[77959]"] SLC7A5--SMG1P1 2 0 1.00 0.00 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868885:- SMG1P1^ENSG00000237296.9 chr16:22454702:+ YES_LDAS 0.0102 GT 1.5301 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:65.34Mb]"] SLC7A5--SMG1P1 2 0 1.00 0.00 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868885:- SMG1P1^ENSG00000237296.9 chr16:22451620:+ YES_LDAS 0.0102 GT 1.5301 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:65.34Mb]"] SCLY--ANXA6 2 0 1.00 0.00 INCL_NON_REF_SPLICE SCLY^ENSG00000132330.18 chr2:238083051:+ ANXA6^ENSG00000197043.14 chr5:151129430:- NO_LDAS 0.0102 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr5]"] RPL38--AATF 2 0 2.00 0.00 INCL_NON_REF_SPLICE RPL38^ENSG00000172809.13 chr17:74209313:+ AATF^ENSG00000275700.6 chr17:36950307:+ YES_LDAS 0.0203 GT 1.6402 AG 1.7968 ["INTRACHROMOSOMAL[chr17:37.15Mb]"] RBBP4--C1QBP 2 0 0.50 0.00 ONLY_REF_SPLICE RBBP4^ENSG00000162521.19 chr1:32662337:+ C1QBP^ENSG00000108561.8 chr17:5434966:- NO_LDAS 0.0051 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr17]"] RABL6--IFFO1 2 0 2.00 0.00 INCL_NON_REF_SPLICE RABL6^ENSG00000196642.19 chr9:136831947:+ IFFO1^ENSG00000010295.20 chr12:6548825:- NO_LDAS 0.0203 GT 1.3710 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr12]"] RAB3GAP1--SMARCAL1 2 0 2.00 0.00 INCL_NON_REF_SPLICE RAB3GAP1^ENSG00000115839.18 chr2:135113241:+ SMARCAL1^ENSG00000138375.13 chr2:216450979:+ NO_LDAS 0.0203 GT 1.6402 AG 1.9329 ["INTRACHROMOSOMAL[chr2:81.24Mb]"] RAB11FIP3--CYTH1 2 0 2.00 0.00 ONLY_REF_SPLICE RAB11FIP3^ENSG00000090565.17 chr16:489000:+ CYTH1^ENSG00000108669.16 chr17:78709732:- YES_LDAS 0.0203 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr17]"] PCED1B--C1orf122 2 0 2.00 0.00 ONLY_REF_SPLICE PCED1B^ENSG00000179715.13 chr12:47216689:+ C1orf122^ENSG00000197982.14 chr1:37808531:+ YES_LDAS 0.0203 GT 1.8323 AG 1.6402 ["INTERCHROMOSOMAL[chr12--chr1]"] MRPS18A--AC074117.1 2 0 2.00 0.00 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- AC074117.1^ENSG00000234072.1 chr2:27358885:+ YES_LDAS 0.0203 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr2]"] MOSPD2--FANCB 2 0 2.00 0.00 ONLY_REF_SPLICE MOSPD2^ENSG00000130150.12 chrX:14873758:+ FANCB^ENSG00000181544.15 chrX:14859334:- YES_LDAS 0.0203 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chrX:0.00Mb]","LOCAL_INVERSION:+:-:[352]"] MIR4435-2HG--AC083899.1 2 0 2.00 0.00 ONLY_REF_SPLICE MIR4435-2HG^ENSG00000172965.17 chr2:111344061:- AC083899.1^ENSG00000204745.4 chr2:87125198:+ YES_LDAS 0.0203 GT 1.8295 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr2:23.81Mb]"] LINC02728--GAB2 2 0 2.00 0.00 ONLY_REF_SPLICE LINC02728^ENSG00000251323.3 chr11:78425337:- GAB2^ENSG00000033327.13 chr11:78280901:- YES_LDAS 0.0203 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[5634]"] IGL-@-ext--ITGAM 2 0 2.00 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22880920:- ITGAM^ENSG00000169896.18 chr16:31265811:+ NO_LDAS 0.0203 AG 1.7232 AG 1.7056 ["INTERCHROMOSOMAL[chr22--chr16]"] IGL-@-ext--FUS 2 0 2.00 0.00 INCL_NON_REF_SPLICE IGL-@-ext^IGL-.g@-ext chr22:22901142:- FUS^ENSG00000089280.19 chr16:31189916:+ YES_LDAS 0.0203 GT 1.2729 AG 1.7232 ["INTERCHROMOSOMAL[chr22--chr16]"] HOXB-AS1--CCDC106 2 0 2.00 0.00 INCL_NON_REF_SPLICE HOXB-AS1^ENSG00000230148.8 chr17:48550402:+ CCDC106^ENSG00000173581.8 chr19:55651285:+ YES_LDAS 0.0203 GT 1.3383 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr19]"] HMBOX1--C1QBP 2 0 0.50 0.00 ONLY_REF_SPLICE HMBOX1^ENSG00000147421.18 chr8:28924755:+ C1QBP^ENSG00000108561.8 chr17:5434966:- NO_LDAS 0.0051 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr17]"] HLA-B--CACNA1C 2 0 2.00 0.00 INCL_NON_REF_SPLICE HLA-B^ENSG00000234745.13 chr6:31354629:- CACNA1C^ENSG00000151067.22 chr12:2610541:+ NO_LDAS 0.0203 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr12]"] H4C12--RANBP2 2 0 0.67 0.00 INCL_NON_REF_SPLICE H4C12^ENSG00000273542.2 chr6:27831068:- RANBP2^ENSG00000153201.16 chr2:108751528:+ NO_LDAS 0.0068 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr6--chr2]"] FLI1--NPAS1 2 0 2.00 0.00 INCL_NON_REF_SPLICE FLI1^ENSG00000151702.17 chr11:128694505:+ NPAS1^ENSG00000130751.10 chr19:47045272:+ NO_LDAS 0.0203 GT 1.5329 AG 1.7056 ["INTERCHROMOSOMAL[chr11--chr19]"] FKBP4--UBE2I 2 0 2.00 0.00 ONLY_REF_SPLICE FKBP4^ENSG00000004478.8 chr12:2795244:+ UBE2I^ENSG00000103275.21 chr16:1314020:+ YES_LDAS 0.0203 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr16]"] FGFR1--FGFR3 2 0 2.00 0.00 ONLY_REF_SPLICE FGFR1^ENSG00000077782.21 chr8:38414779:- FGFR3^ENSG00000068078.20 chr4:1806257:+ NO_LDAS 0.0203 GT 1.1589 AG 1.4295 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr8--chr4]"] ESRRB--AC016526.2 2 0 2.00 0.00 ONLY_REF_SPLICE ESRRB^ENSG00000119715.15 chr14:76310916:+ AC016526.2^ENSG00000258454.1 chr14:76252051:+ YES_LDAS 0.0203 GT 1.7465 AG 1.6895 ["INTRACHROMOSOMAL[chr14:0.05Mb]","LOCAL_REARRANGEMENT:+:[47238]"] EPB41L2--MCL1 2 0 2.00 0.00 ONLY_REF_SPLICE EPB41L2^ENSG00000079819.19 chr6:130885096:- MCL1^ENSG00000143384.14 chr1:150577491:- YES_LDAS 0.0203 GT 1.8892 AG 1.3996 ["INTERCHROMOSOMAL[chr6--chr1]"] EGR3--PWWP3A 2 0 2.00 0.00 INCL_NON_REF_SPLICE EGR3^ENSG00000179388.9 chr8:22693357:- PWWP3A^ENSG00000160953.17 chr19:1356324:+ YES_LDAS 0.0203 GT 1.2419 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr19]"] DTX2--DTX1 2 0 2.00 0.00 ONLY_REF_SPLICE DTX2^ENSG00000091073.19 chr7:76503587:+ DTX1^ENSG00000135144.7 chr12:113095325:+ NO_LDAS 0.0203 GT 1.9219 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr12]"] CRYZ--CRYZP1 2 0 2.00 0.00 INCL_NON_REF_SPLICE CRYZ^ENSG00000116791.14 chr1:74714579:- CRYZP1^ENSG00000233025.1 chr7:103089197:- NO_LDAS 0.0203 GT 1.4716 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr7]"] CPAMD8--IGL-@-ext 2 0 2.00 0.00 INCL_NON_REF_SPLICE CPAMD8^ENSG00000160111.14 chr19:17000412:- IGL-@-ext^IGL-.g@-ext chr22:22759207:- NO_LDAS 0.0203 GA 1.7465 GA 1.7819 ["INTERCHROMOSOMAL[chr19--chr22]"] CFAP221--IGL-@-ext 2 0 2.00 0.00 INCL_NON_REF_SPLICE CFAP221^ENSG00000163075.13 chr2:119573022:+ IGL-@-ext^IGL-.g@-ext chr22:22759207:- NO_LDAS 0.0203 CA 1.7819 GA 1.7819 ["INTERCHROMOSOMAL[chr2--chr22]"] BCKDHB--AL359715.1 2 0 2.00 0.00 ONLY_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ AL359715.1^ENSG00000233967.7 chr6:80462872:+ YES_LDAS 0.0203 GT 1.9899 AG 1.8256 ["INTRACHROMOSOMAL[chr6:0.10Mb]","NEIGHBORS[95025]"] ASPG--IGL-@-ext 2 0 1.00 0.00 INCL_NON_REF_SPLICE ASPG^ENSG00000166183.16 chr14:104098905:+ IGL-@-ext^IGL-.g@-ext chr22:22759207:- NO_LDAS 0.0102 AG 1.8256 GA 1.7819 ["INTERCHROMOSOMAL[chr14--chr22]"] ASPG--IGL-@-ext 2 0 1.00 0.00 INCL_NON_REF_SPLICE ASPG^ENSG00000166183.16 chr14:104098905:+ IGL-@-ext^IGL-.g@-ext chr22:22735085:- NO_LDAS 0.0102 AG 1.8256 AA 1.7819 ["INTERCHROMOSOMAL[chr14--chr22]"] AL391056.1--C1QBP 2 0 0.50 0.00 ONLY_REF_SPLICE AL391056.1^ENSG00000227619.3 chr9:129582768:+ C1QBP^ENSG00000108561.8 chr17:5434966:- NO_LDAS 0.0051 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr17]"] AL050309.1--KLF8 2 0 2.00 0.00 ONLY_REF_SPLICE AL050309.1^ENSG00000227486.2 chrX:56014961:+ KLF8^ENSG00000102349.18 chrX:56250231:+ YES_LDAS 0.0203 GT 1.9329 AG 1.7968 ["INTRACHROMOSOMAL[chrX:0.02Mb]","NEIGHBORS[23085]"] AGAP10P--PARG 2 0 0.14 0.00 ONLY_REF_SPLICE AGAP10P^ENSG00000230869.1 chr10:45684520:+ PARG^ENSG00000227345.9 chr10:49934163:- NO_LDAS 0.0014 GT 1.7465 AG 1.5656 ["INTRACHROMOSOMAL[chr10:4.12Mb]"] AFTPH--RPS8 2 0 2.00 0.00 ONLY_REF_SPLICE AFTPH^ENSG00000119844.15 chr2:64524612:+ RPS8^ENSG00000142937.12 chr1:44776034:+ YES_LDAS 0.0203 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr1]"] ADCY7--ADCY5 2 0 2.00 0.00 INCL_NON_REF_SPLICE ADCY7^ENSG00000121281.13 chr16:50314327:+ ADCY5^ENSG00000173175.15 chr3:123289927:- YES_LDAS 0.0203 GT 1.9656 AG 1.8323 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr16--chr3]"] AC104123.1--CAST 2 0 2.00 0.00 ONLY_REF_SPLICE AC104123.1^ENSG00000251314.2 chr5:96379652:+ CAST^ENSG00000153113.24 chr5:96675539:+ YES_LDAS 0.0203 GT 1.7819 AG 1.8295 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.11Mb]"] AC018697.1--MARCKSL1 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC018697.1^ENSG00000266573.6 chr18:24985428:+ MARCKSL1^ENSG00000175130.7 chr1:32334917:- NO_LDAS 0.0203 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr18--chr1]"] AC015712.1--C1QBP 2 0 0.50 0.00 ONLY_REF_SPLICE AC015712.1^ENSG00000232386.9 chr15:100855348:+ C1QBP^ENSG00000108561.8 chr17:5434966:- NO_LDAS 0.0051 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr17]"] AC009533.1--Z97205.2 2 0 1.00 0.00 INCL_NON_REF_SPLICE AC009533.1^ENSG00000111788.10 chr12:9298867:+ Z97205.2^ENSG00000260422.1 chr6:164084989:- NO_LDAS 0.0102 GT 1.5219 AG 1.2310 ["INTERCHROMOSOMAL[chr12--chr6]"] AC005062.1--MACC1 2 0 2.00 0.00 ONLY_REF_SPLICE AC005062.1^ENSG00000243004.6 chr7:20129120:- MACC1^ENSG00000183742.13 chr7:20161870:- YES_LDAS 0.0203 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr7:0.01Mb]","NEIGHBORS_OVERLAP:-:-:[5798]"] FOXO1--LINC00598 2 1 2.00 0.33 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40350302:- YES_LDAS 0.0237 GT 1.7232 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] ZZEF1--HP1BP3 1 0 1.00 0.00 ONLY_REF_SPLICE ZZEF1^ENSG00000074755.15 chr17:4034015:- HP1BP3^ENSG00000127483.19 chr1:20773610:- YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr1]"] ZYX--PANK4 1 0 1.00 0.00 ONLY_REF_SPLICE ZYX^ENSG00000159840.16 chr7:143388945:+ PANK4^ENSG00000157881.16 chr1:2509930:- YES_LDAS 0.0102 GT 1.5329 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr1]"] ZYG11B--CHFR 1 0 1.00 0.00 ONLY_REF_SPLICE ZYG11B^ENSG00000162378.13 chr1:52802139:+ CHFR^ENSG00000072609.18 chr12:132822311:- YES_LDAS 0.0102 GT 1.7968 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr12]"] ZWILCH--SMG1P2 1 0 0.50 0.00 ONLY_REF_SPLICE ZWILCH^ENSG00000174442.12 chr15:66546705:+ SMG1P2^ENSG00000205534.6 chr16:29560215:- YES_LDAS 0.0051 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr15--chr16]"] ZSWIM4--ATP1A1 1 0 1.00 0.00 ONLY_REF_SPLICE ZSWIM4^ENSG00000132003.9 chr19:13799921:+ ATP1A1^ENSG00000163399.16 chr1:116389439:+ YES_LDAS 0.0102 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNFX1--STAU1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNFX1^ENSG00000124201.15 chr20:49269942:- STAU1^ENSG00000124214.21 chr20:49115867:- YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr20:0.05Mb]","NEIGHBORS[49579]"] ZNF93--PPP1CA 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF93^ENSG00000184635.16 chr19:19901091:+ PPP1CA^ENSG00000172531.16 chr11:67399665:- YES_LDAS 0.0102 GT 1.8323 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr11]"] ZNF839--STAT5B 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF839^ENSG00000022976.16 chr14:102326887:+ STAT5B^ENSG00000173757.10 chr17:42217464:- YES_LDAS 0.0102 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr17]"] ZNF823--TRPC4AP 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF823^ENSG00000197933.13 chr19:11738817:- TRPC4AP^ENSG00000100991.12 chr20:35016139:- YES_LDAS 0.0102 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr20]"] ZNF804A--TBC1D15 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF804A^ENSG00000170396.9 chr2:184599070:+ TBC1D15^ENSG00000121749.16 chr12:71872070:+ NO_LDAS 0.0102 GT 1.8892 AG 1.5329 ["INTERCHROMOSOMAL[chr2--chr12]"] ZNF804A--KIAA1549 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF804A^ENSG00000170396.9 chr2:184599070:+ KIAA1549^ENSG00000122778.10 chr7:138919438:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr7]"] ZNF800--CEP170 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF800^ENSG00000048405.10 chr7:127373342:- CEP170^ENSG00000143702.16 chr1:243221813:- YES_LDAS 0.0102 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr1]"] ZNF799--ZNF267 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF799^ENSG00000196466.10 chr19:12391041:- ZNF267^ENSG00000185947.15 chr16:31915904:+ NO_LDAS 0.0102 GT 1.7465 AG 1.9656 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr16]"] ZNF783--EFHD2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF783^ENSG00000204946.10 chr7:149262357:+ EFHD2^ENSG00000142634.13 chr1:15425871:+ YES_LDAS 0.0102 GT 1.2867 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr1]"] ZNF771--EIF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF771^ENSG00000179965.12 chr16:30429889:+ EIF1^ENSG00000173812.11 chr17:41689218:+ NO_LDAS 0.0102 GC 1.9086 AG 1.2729 ["INTERCHROMOSOMAL[chr16--chr17]"] ZNF761--MTA3 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF761^ENSG00000160336.16 chr19:53449638:+ MTA3^ENSG00000057935.14 chr2:42718988:+ YES_LDAS 0.0102 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr2]"] ZNF738--SDF2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF738^ENSG00000172687.13 chr19:21375964:+ SDF2^ENSG00000132581.10 chr17:28655483:- YES_LDAS 0.0102 GT 1.6402 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr17]"] ZNF731P--FAM126A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF731P^ENSG00000227671.4 chr1:247199360:- FAM126A^ENSG00000122591.13 chr7:22978448:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr7]"] ZNF710--DHCR24 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF710^ENSG00000140548.10 chr15:90067129:+ DHCR24^ENSG00000116133.13 chr1:54852247:- NO_LDAS 0.0102 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr1]"] ZNF708--NBAS 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF708^ENSG00000182141.10 chr19:21309246:- NBAS^ENSG00000151779.13 chr2:15489022:- NO_LDAS 0.0102 GT 1.3996 AG 1.5656 ["INTERCHROMOSOMAL[chr19--chr2]"] ZNF699--ZNF254 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF699^ENSG00000196110.8 chr19:9302378:- ZNF254^ENSG00000213096.11 chr19:24126254:+ YES_LDAS 0.0102 GT 1.9219 AG 1.8295 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:14.72Mb]"] ZNF696--ZNF543 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF696^ENSG00000185730.8 chr8:143293065:+ ZNF543^ENSG00000178229.8 chr19:57323682:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7465 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr8--chr19]"] ZNF671--PSEN2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF671^ENSG00000083814.13 chr19:57727391:- PSEN2^ENSG00000143801.18 chr1:226897720:+ NO_LDAS 0.0102 GT 1.7056 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF665--FAM76A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF665^ENSG00000197497.11 chr19:53191719:- FAM76A^ENSG00000009780.16 chr1:27732603:+ NO_LDAS 0.0102 GC 1.9329 AG 1.3710 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF66--RNGTT 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF66^ENSG00000160229.13 chr19:20793878:+ RNGTT^ENSG00000111880.16 chr6:88853764:- YES_LDAS 0.0102 GT 1.7968 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr6]"] ZNF641--TANGO6 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF641^ENSG00000167528.13 chr12:48342945:- TANGO6^ENSG00000103047.8 chr16:68863006:+ NO_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr16]"] ZNF641--SEMA4B 1 0 0.50 0.00 INCL_NON_REF_SPLICE ZNF641^ENSG00000167528.13 chr12:48347876:- SEMA4B^ENSG00000185033.14 chr15:90185028:+ NO_LDAS 0.0051 GT 1.8892 AG 1.5219 ["INTERCHROMOSOMAL[chr12--chr15]"] ZNF641--H1-7 1 0 0.50 0.00 INCL_NON_REF_SPLICE ZNF641^ENSG00000167528.13 chr12:48347876:- H1-7^ENSG00000187166.1 chr12:48329567:+ NO_LDAS 0.0051 GT 1.8892 AG 1.5656 ["INTRACHROMOSOMAL[chr12:0.01Mb]","LOCAL_INVERSION:-:+:[6901]"] ZNF638--XPO1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF638^ENSG00000075292.19 chr2:71331865:+ XPO1^ENSG00000082898.19 chr2:61526521:- NO_LDAS 0.0102 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr2:9.74Mb]"] ZNF638--OGDH 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF638^ENSG00000075292.19 chr2:71406262:+ OGDH^ENSG00000105953.15 chr7:44693825:+ YES_LDAS 0.0102 GT 1.5546 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr7]"] ZNF627--UBE2D2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF627^ENSG00000198551.10 chr19:11564492:+ UBE2D2^ENSG00000131508.16 chr5:139600372:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr5]"] ZNF622--TCTN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF622^ENSG00000173545.5 chr5:16453013:- TCTN3^ENSG00000119977.22 chr10:95682678:- YES_LDAS 0.0102 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr5--chr10]"] ZNF614--CBX4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF614^ENSG00000142556.19 chr19:52018415:- CBX4^ENSG00000141582.15 chr17:79834159:- YES_LDAS 0.0102 GT 1.9656 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr17]"] ZNF606--ZNF765 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF606^ENSG00000166704.11 chr19:58001289:- ZNF765^ENSG00000196417.13 chr19:53425330:+ YES_LDAS 0.0102 GT 1.5058 AG 1.9656 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:4.55Mb]"] ZNF606--CENPB 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF606^ENSG00000166704.11 chr19:57999808:- CENPB^ENSG00000125817.8 chr20:3784075:- YES_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr20]"] ZNF605--TRAM1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF605^ENSG00000196458.11 chr12:132933035:- TRAM1^ENSG00000067167.8 chr8:70575005:- YES_LDAS 0.0102 GT 1.6402 AG 1.5656 ["INTERCHROMOSOMAL[chr12--chr8]"] ZNF589--SMARCC1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF589^ENSG00000164048.14 chr3:48257022:+ SMARCC1^ENSG00000173473.11 chr3:47745993:- YES_LDAS 0.0102 GT 1.9219 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.46Mb]"] ZNF589--HADHB 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF589^ENSG00000164048.14 chr3:48241214:+ HADHB^ENSG00000138029.14 chr2:26254247:+ NO_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr2]"] ZNF587--ZNF302 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF587^ENSG00000198466.12 chr19:57850071:+ ZNF302^ENSG00000089335.21 chr19:34678737:+ NO_LDAS 0.0102 GT 1.8062 AG 1.8295 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:23.16Mb]"] ZNF585B--LUC7L 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF585B^ENSG00000245680.11 chr19:37210441:- LUC7L^ENSG00000007392.17 chr16:208188:- YES_LDAS 0.0102 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr19--chr16]"] ZNF578--GRAMD4 1 0 0.50 0.00 ONLY_REF_SPLICE ZNF578^ENSG00000258405.11 chr19:52491425:+ GRAMD4^ENSG00000075240.17 chr22:46626751:+ YES_LDAS 0.0051 GT 1.9219 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr22]"] ZNF57--HMSD 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF57^ENSG00000171970.13 chr19:2901048:+ HMSD^ENSG00000221887.6 chr18:63960158:+ YES_LDAS 0.0102 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr19--chr18]"] ZNF564--DPP9 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF564^ENSG00000249709.8 chr19:12551330:- DPP9^ENSG00000142002.18 chr19:4705970:- YES_LDAS 0.0102 GT 1.7056 AG 1.9656 ["INTRACHROMOSOMAL[chr19:7.80Mb]"] ZNF563--ARHGAP45 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF563^ENSG00000188868.14 chr19:12319695:- ARHGAP45^ENSG00000180448.11 chr19:1081550:+ NO_LDAS 0.0102 GT 1.7819 AG 1.5656 ["INTRACHROMOSOMAL[chr19:11.23Mb]"] ZNF524--WWC1 1 0 0.14 0.00 INCL_NON_REF_SPLICE ZNF524^ENSG00000171443.7 chr19:55602862:+ WWC1^ENSG00000113645.15 chr5:168454003:+ NO_LDAS 0.0014 GC 1.5219 AG 1.3996 ["INTERCHROMOSOMAL[chr19--chr5]"] ZNF519--WDR7 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF519^ENSG00000175322.12 chr18:14124350:- WDR7^ENSG00000091157.14 chr18:56731383:+ NO_LDAS 0.0102 GT 1.7465 AG 1.8323 ["INTRACHROMOSOMAL[chr18:42.52Mb]"] ZNF519--ATP9B 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF519^ENSG00000175322.12 chr18:14124350:- ATP9B^ENSG00000166377.20 chr18:79277054:+ YES_LDAS 0.0102 GT 1.7465 AG 1.7968 ["INTRACHROMOSOMAL[chr18:64.94Mb]"] ZNF512--FIP1L1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF512^ENSG00000243943.10 chr2:27583716:+ FIP1L1^ENSG00000145216.16 chr4:53399730:+ YES_LDAS 0.0102 GT 1.8323 AG 1.7056 ["INTERCHROMOSOMAL[chr2--chr4]"] ZNF461--ZNF320 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF461^ENSG00000197808.12 chr19:36656448:- ZNF320^ENSG00000182986.14 chr19:52890328:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:16.19Mb]"] ZNF439--MYL12A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF439^ENSG00000171291.8 chr19:11848930:+ MYL12A^ENSG00000101608.13 chr18:3253233:+ YES_LDAS 0.0102 GT 1.7056 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr18]"] ZNF433-AS1--KIFAP3 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF433-AS1^ENSG00000219665.8 chr19:12001822:+ KIFAP3^ENSG00000075945.13 chr1:169961235:- NO_LDAS 0.0102 GT 1.8295 AG 1.4566 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF385A--STRADA 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF385A^ENSG00000161642.18 chr12:54384428:- STRADA^ENSG00000266173.7 chr17:63728413:- YES_LDAS 0.0102 GT 1.7056 AG 1.4566 ["INTERCHROMOSOMAL[chr12--chr17]"] ZNF37BP--ZFP1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF37BP^ENSG00000234420.7 chr10:42525540:- ZFP1^ENSG00000184517.12 chr16:75166770:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr10--chr16]"] ZNF37A--AGAP10P 1 0 0.11 0.00 ONLY_REF_SPLICE ZNF37A^ENSG00000075407.18 chr10:38096632:+ AGAP10P^ENSG00000230869.1 chr10:45694748:+ YES_LDAS 0.0011 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr10:7.53Mb]"] ZNF347--ABCA9 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF347^ENSG00000197937.13 chr19:53148681:- ABCA9^ENSG00000154258.17 chr17:68975165:- NO_LDAS 0.0102 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr17]"] ZNF346--NSD1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF346^ENSG00000113761.12 chr5:177022913:+ NSD1^ENSG00000165671.21 chr5:177204120:+ YES_LDAS 0.0102 GT 1.3996 AG 1.9656 ["INTRACHROMOSOMAL[chr5:0.05Mb]","NEIGHBORS[51836]"] ZNF33A--UNC79 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF33A^ENSG00000189180.16 chr10:38054515:+ UNC79^ENSG00000133958.13 chr14:93572037:+ NO_LDAS 0.0102 GT 1.5656 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr14]"] ZNF33A--EEF1AKNMT 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF33A^ENSG00000189180.16 chr10:38017386:+ EEF1AKNMT^ENSG00000010165.20 chr1:171783740:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr10--chr1]"] ZNF326--MYO18A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF326^ENSG00000162664.17 chr1:90027485:+ MYO18A^ENSG00000196535.17 chr17:29095059:- NO_LDAS 0.0102 GT 1.2729 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr17]"] ZNF318--PLA1A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF318^ENSG00000171467.16 chr6:43331698:- PLA1A^ENSG00000144837.9 chr3:119616012:+ YES_LDAS 0.0102 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr3]"] ZNF274--KCTD21 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF274^ENSG00000171606.18 chr19:58183998:+ KCTD21^ENSG00000188997.8 chr11:78174583:- YES_LDAS 0.0102 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr11]"] ZNF251--SHARPIN 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF251^ENSG00000198169.9 chr8:144753683:- SHARPIN^ENSG00000179526.17 chr8:144103225:- YES_LDAS 0.0102 GT 1.7465 AG 1.5219 ["INTRACHROMOSOMAL[chr8:0.61Mb]"] ZNF251--PDS5A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF251^ENSG00000198169.9 chr8:144753683:- PDS5A^ENSG00000121892.15 chr4:39849652:- YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr4]"] ZNF236-DT--PHF12 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF236-DT^ENSG00000264278.1 chr18:76822020:- PHF12^ENSG00000109118.14 chr17:28927063:- YES_LDAS 0.0102 GC 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr17]"] ZNF217--AC004069.1 1 0 0.25 0.00 INCL_NON_REF_SPLICE ZNF217^ENSG00000171940.14 chr20:53582680:- AC004069.1^ENSG00000251259.1 chr4:105137523:- YES_LDAS 0.0025 GC 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr20--chr4]"] ZNF197-AS1--KIF15 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF197-AS1^ENSG00000233509.2 chr3:44624722:- KIF15^ENSG00000163808.17 chr3:44774395:+ NO_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.14Mb]"] ZNF184--ZNF317 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF184^ENSG00000096654.15 chr6:27472288:- ZNF317^ENSG00000130803.15 chr19:9157268:+ NO_LDAS 0.0102 GT 1.9656 AG 1.9656 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr6--chr19]"] ZNF169--EIF3D 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF169^ENSG00000175787.17 chr9:94293069:+ EIF3D^ENSG00000100353.18 chr22:36517431:- YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr22]"] ZNF148--TTC32 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF148^ENSG00000163848.20 chr3:125232326:- TTC32^ENSG00000183891.6 chr2:19896809:- NO_LDAS 0.0102 GT 0.6998 AG 1.6402 ["INTERCHROMOSOMAL[chr3--chr2]"] ZNF148--TRA2B 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF148^ENSG00000163848.20 chr3:125313308:- TRA2B^ENSG00000136527.18 chr3:185926734:- YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr3:60.54Mb]"] ZNF146--ZNF19 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF146^ENSG00000167635.12 chr19:36237085:+ ZNF19^ENSG00000157429.16 chr16:71475465:- NO_LDAS 0.0102 GT 1.9329 AG 1.9329 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr16]"] ZNF141--PIGG 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF141^ENSG00000131127.14 chr4:337986:+ PIGG^ENSG00000174227.16 chr4:505718:+ YES_LDAS 0.0102 GT 1.4295 AG 1.8295 ["INTRACHROMOSOMAL[chr4:0.11Mb]"] ZNF134--MRPS6 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF134^ENSG00000213762.12 chr19:57621493:+ MRPS6^ENSG00000243927.6 chr21:34102835:+ YES_LDAS 0.0102 GT 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr21]"] ZNF124--SCFD1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF124^ENSG00000196418.12 chr1:247171848:- SCFD1^ENSG00000092108.22 chr14:30700188:+ NO_LDAS 0.0102 GT 1.6895 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr14]"] ZNF124--KDM2A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF124^ENSG00000196418.12 chr1:247171848:- KDM2A^ENSG00000173120.15 chr11:67180079:+ YES_LDAS 0.0102 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr11]"] ZNF124--AHCYL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF124^ENSG00000196418.12 chr1:247157093:- AHCYL1^ENSG00000168710.18 chr1:109985131:+ YES_LDAS 0.0102 GC 1.6729 AG 1.9329 ["INTRACHROMOSOMAL[chr1:137.10Mb]"] ZMYND8--HOMER3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZMYND8^ENSG00000101040.19 chr20:47282102:- HOMER3^ENSG00000051128.19 chr19:18940265:- NO_LDAS 0.0102 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr20--chr19]"] ZMYM2--PSPC1 1 0 1.00 0.00 ONLY_REF_SPLICE ZMYM2^ENSG00000121741.17 chr13:19960026:+ PSPC1^ENSG00000121390.19 chr13:19782791:- YES_LDAS 0.0102 GT 1.7056 AG 1.8256 ["INTRACHROMOSOMAL[chr13:0.18Mb]"] ZKSCAN1--POLR2E 1 0 1.00 0.00 ONLY_REF_SPLICE ZKSCAN1^ENSG00000106261.17 chr7:100024307:+ POLR2E^ENSG00000099817.12 chr19:1091907:- YES_LDAS 0.0102 GT 1.9899 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr19]"] ZKSCAN1--FAN1 1 0 1.00 0.00 ONLY_REF_SPLICE ZKSCAN1^ENSG00000106261.17 chr7:100030375:+ FAN1^ENSG00000198690.10 chr15:30904512:+ NO_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr15]"] ZHX2--PVT1 1 0 1.00 0.00 ONLY_REF_SPLICE ZHX2^ENSG00000178764.8 chr8:122954028:+ PVT1^ENSG00000249859.12 chr8:128009590:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr8:4.82Mb]"] ZFP14--RBM4 1 0 1.00 0.00 ONLY_REF_SPLICE ZFP14^ENSG00000142065.14 chr19:36360435:- RBM4^ENSG00000173933.21 chr11:66665856:+ NO_LDAS 0.0102 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr11]"] ZFAT--TEP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZFAT^ENSG00000066827.16 chr8:134594811:- TEP1^ENSG00000129566.13 chr14:20406325:- NO_LDAS 0.0102 GT 1.8892 AG 1.1589 ["INTERCHROMOSOMAL[chr8--chr14]"] ZFAT--MTERF3 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAT^ENSG00000066827.16 chr8:134565333:- MTERF3^ENSG00000156469.9 chr8:96258700:- YES_LDAS 0.0102 GT 1.9086 AG 1.7232 ["INTRACHROMOSOMAL[chr8:38.22Mb]"] ZFAS1--TBC1D5 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAS1^ENSG00000177410.13 chr20:49280570:+ TBC1D5^ENSG00000131374.14 chr3:17508605:- YES_LDAS 0.0102 GT 1.5329 AG 1.6402 ["INTERCHROMOSOMAL[chr20--chr3]"] ZFAND6--MORF4L1 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND6^ENSG00000086666.19 chr15:80059809:+ MORF4L1^ENSG00000185787.15 chr15:78878213:+ YES_LDAS 0.0102 GT 1.5058 AG 1.7968 ["INTRACHROMOSOMAL[chr15:1.16Mb]"] ZFAND5--DCTD 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND5^ENSG00000107372.13 chr9:72364696:- DCTD^ENSG00000129187.15 chr4:182915575:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr4]"] ZFAND4--ATP6V1E1 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND4^ENSG00000172671.20 chr10:45663542:- ATP6V1E1^ENSG00000131100.13 chr22:17619127:- YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr22]"] ZFAND3--MAPK14 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND3^ENSG00000156639.12 chr6:37820016:+ MAPK14^ENSG00000112062.11 chr6:36052699:+ NO_LDAS 0.0102 GT 1.5301 AG 1.8892 ["INTRACHROMOSOMAL[chr6:1.71Mb]"] ZFAND3--GLO1 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND3^ENSG00000156639.12 chr6:37820016:+ GLO1^ENSG00000124767.7 chr6:38686974:- YES_LDAS 0.0102 GT 1.5301 AG 1.8295 ["INTRACHROMOSOMAL[chr6:0.52Mb]"] ZFAND1--ATP6V1H 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND1^ENSG00000104231.11 chr8:81713918:- ATP6V1H^ENSG00000047249.18 chr8:53801896:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr8:27.86Mb]"] ZFAND1--ATAD2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZFAND1^ENSG00000104231.11 chr8:81702329:- ATAD2B^ENSG00000119778.15 chr2:23823481:- YES_LDAS 0.0102 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr2]"] ZDHHC8--TMEM214 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZDHHC8^ENSG00000099904.16 chr22:20139892:+ TMEM214^ENSG00000119777.20 chr2:27037829:+ NO_LDAS 0.0102 GT 1.5329 AG 1.3710 ["INTERCHROMOSOMAL[chr22--chr2]"] ZDHHC14--PSMB1 1 0 1.00 0.00 ONLY_REF_SPLICE ZDHHC14^ENSG00000175048.17 chr6:157382266:+ PSMB1^ENSG00000008018.9 chr6:170549113:- YES_LDAS 0.0102 GT 1.7056 AG 1.9086 ["INTRACHROMOSOMAL[chr6:12.86Mb]"] ZCCHC7--SIPA1L1 1 0 1.00 0.00 ONLY_REF_SPLICE ZCCHC7^ENSG00000147905.18 chr9:37126942:+ SIPA1L1^ENSG00000197555.9 chr14:71587571:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr14]"] ZCCHC7--RBM39 1 0 1.00 0.00 ONLY_REF_SPLICE ZCCHC7^ENSG00000147905.18 chr9:37305714:+ RBM39^ENSG00000131051.24 chr20:35713096:- NO_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr20]"] ZCCHC7--ANKFY1 1 0 1.00 0.00 ONLY_REF_SPLICE ZCCHC7^ENSG00000147905.18 chr9:37126942:+ ANKFY1^ENSG00000185722.18 chr17:4235890:- YES_LDAS 0.0102 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr9--chr17]"] ZC3H12D--GPHN 1 0 1.00 0.00 ONLY_REF_SPLICE ZC3H12D^ENSG00000178199.14 chr6:149484813:- GPHN^ENSG00000171723.16 chr14:67058649:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr14]"] ZBTB8OS--ZCCHC7 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB8OS^ENSG00000176261.15 chr1:32650402:- ZCCHC7^ENSG00000147905.18 chr9:37126312:+ YES_LDAS 0.0102 GT 1.3996 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr9]"] ZBTB8OS--KMT2E 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB8OS^ENSG00000176261.15 chr1:32650433:- KMT2E^ENSG00000005483.21 chr7:105040839:+ NO_LDAS 0.0102 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr7]"] ZBTB47--DRG2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBTB47^ENSG00000114853.15 chr3:42658426:+ DRG2^ENSG00000108591.10 chr17:18107162:+ NO_LDAS 0.0102 GC 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr17]"] ZBTB37--DARS2 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB37^ENSG00000185278.15 chr1:173873566:+ DARS2^ENSG00000117593.12 chr1:173853349:+ YES_LDAS 0.0102 GT 1.6402 AG 1.7968 ["INTRACHROMOSOMAL[chr1:0.01Mb]","LOCAL_REARRANGEMENT:+:[9274]"] ZBTB20--GNG7 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB20^ENSG00000181722.17 chr3:114900304:- GNG7^ENSG00000176533.13 chr19:2520725:- NO_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr19]"] ZBTB17--UBA52 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB17^ENSG00000116809.12 chr1:15973039:- UBA52^ENSG00000221983.8 chr19:18573293:+ NO_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr19]"] ZBTB14--TMEM132D-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBTB14^ENSG00000198081.11 chr18:5290626:- TMEM132D-AS1^ENSG00000249196.6 chr12:129110600:+ NO_LDAS 0.0102 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr18--chr12]"] ZBED5--YEATS2 1 0 1.00 0.00 ONLY_REF_SPLICE ZBED5^ENSG00000236287.8 chr11:10856144:- YEATS2^ENSG00000163872.16 chr3:183806866:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr3]"] ZADH2--ZNF407 1 0 1.00 0.00 ONLY_REF_SPLICE ZADH2^ENSG00000180011.7 chr18:75208850:- ZNF407^ENSG00000215421.9 chr18:74781428:+ YES_LDAS 0.0102 GT 1.7968 AG 1.6402 ["INTRACHROMOSOMAL[chr18:0.13Mb]"] Z95118.1--RPL37A 1 0 1.00 0.00 INCL_NON_REF_SPLICE Z95118.1^ENSG00000231559.1 chr6:108817819:+ RPL37A^ENSG00000197756.10 chr2:216499963:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8295 ["INTERCHROMOSOMAL[chr6--chr2]"] Z80897.1--S100A6 1 0 1.00 0.00 INCL_NON_REF_SPLICE Z80897.1^ENSG00000286485.1 chr22:36767831:+ S100A6^ENSG00000197956.10 chr1:153536015:- YES_LDAS 0.0102 GC 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr22--chr1]"] Y_RNA--IMPDH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE Y_RNA^ENSG00000199200.2 chr10:34202036:- IMPDH2^ENSG00000178035.13 chr3:49025219:- YES_LDAS 0.0102 GT 1.7056 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr3]"] YWHAQP7--AC009133.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE YWHAQP7^ENSG00000271142.1 chr12:76619750:+ AC009133.1^ENSG00000238045.9 chr16:29808728:- NO_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr16]"] YWHAQ--UGP2 1 0 1.00 0.00 ONLY_REF_SPLICE YWHAQ^ENSG00000134308.14 chr2:9630159:- UGP2^ENSG00000169764.16 chr2:63882466:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTRACHROMOSOMAL[chr2:54.21Mb]"] YWHAG--RAB43 1 0 1.00 0.00 INCL_NON_REF_SPLICE YWHAG^ENSG00000170027.7 chr7:76327661:- RAB43^ENSG00000172780.17 chr3:129121536:- YES_LDAS 0.0102 GT 1.2366 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr3]"] YTHDF3--CHMP2B 1 0 1.00 0.00 ONLY_REF_SPLICE YTHDF3^ENSG00000185728.17 chr8:63187745:+ CHMP2B^ENSG00000083937.10 chr3:87245714:+ YES_LDAS 0.0102 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr8--chr3]"] YTHDF1--DLGAP4 1 0 1.00 0.00 ONLY_REF_SPLICE YTHDF1^ENSG00000149658.18 chr20:63213864:- DLGAP4^ENSG00000080845.18 chr20:36496705:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr20:26.67Mb]"] YTHDF1--DFFB 1 0 1.00 0.00 ONLY_REF_SPLICE YTHDF1^ENSG00000149658.18 chr20:63213864:- DFFB^ENSG00000169598.17 chr1:3865812:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr1]"] YBX1P9--MECP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE YBX1P9^ENSG00000236994.1 chr1:226318524:- MECP2^ENSG00000169057.24 chrX:154092307:- NO_LDAS 0.0102 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chrX]"] YBEY--PCNT 1 0 1.00 0.00 ONLY_REF_SPLICE YBEY^ENSG00000182362.14 chr21:46287123:+ PCNT^ENSG00000160299.17 chr21:46431529:+ YES_LDAS 0.0102 GT 1.8295 AG 1.7465 ["INTRACHROMOSOMAL[chr21:0.03Mb]","NEIGHBORS[26390]"] YAF2--CEPT1 1 0 1.00 0.00 ONLY_REF_SPLICE YAF2^ENSG00000015153.15 chr12:42237599:- CEPT1^ENSG00000134255.14 chr1:111147642:+ YES_LDAS 0.0102 GT 1.6402 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr1]"] XRN1--ATR 1 0 1.00 0.00 ONLY_REF_SPLICE XRN1^ENSG00000114127.11 chr3:142332375:- ATR^ENSG00000175054.16 chr3:142558776:- NO_LDAS 0.0102 GT 1.2419 AG 1.8323 ["DEEPEST2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:-:[945]"] XRCC3--STAT2 1 0 1.00 0.00 ONLY_REF_SPLICE XRCC3^ENSG00000126215.14 chr14:103707003:- STAT2^ENSG00000170581.14 chr12:56354863:- NO_LDAS 0.0102 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr12]"] XRCC3--CDC42BPB 1 0 0.50 0.00 ONLY_REF_SPLICE XRCC3^ENSG00000126215.14 chr14:103703173:- CDC42BPB^ENSG00000198752.11 chr14:102986580:- NO_LDAS 0.0051 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr14:0.64Mb]"] XRCC3--CDC42BPA 1 0 0.50 0.00 ONLY_REF_SPLICE XRCC3^ENSG00000126215.14 chr14:103703173:- CDC42BPA^ENSG00000143776.18 chr1:227160636:- NO_LDAS 0.0051 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chr1]"] XPR1--RPRD1A 1 0 1.00 0.00 ONLY_REF_SPLICE XPR1^ENSG00000143324.14 chr1:180682411:+ RPRD1A^ENSG00000141425.18 chr18:36033837:- YES_LDAS 0.0102 GT 1.9899 AG 1.3996 ["INTERCHROMOSOMAL[chr1--chr18]"] XPO7--DCUN1D4 1 0 1.00 0.00 ONLY_REF_SPLICE XPO7^ENSG00000130227.17 chr8:21919788:+ DCUN1D4^ENSG00000109184.15 chr4:51911070:+ YES_LDAS 0.0102 GT 1.9219 AG 1.5656 ["INTERCHROMOSOMAL[chr8--chr4]"] XPO5--GTPBP2 1 0 1.00 0.00 ONLY_REF_SPLICE XPO5^ENSG00000124571.18 chr6:43549489:- GTPBP2^ENSG00000172432.19 chr6:43626410:- YES_LDAS 0.0102 GT 1.8062 AG 1.8256 ["INTRACHROMOSOMAL[chr6:0.03Mb]","LOCAL_REARRANGEMENT:-:[29278]"] XPO1--CCT4 1 0 1.00 0.00 ONLY_REF_SPLICE XPO1^ENSG00000082898.19 chr2:61493894:- CCT4^ENSG00000115484.15 chr2:61880394:- NO_LDAS 0.0102 GT 1.9329 AG 1.7819 ["Klijn_CellLines","DEEPEST2019","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr2:0.33Mb]"] XIAP--SGMS1 1 0 1.00 0.00 ONLY_REF_SPLICE XIAP^ENSG00000101966.13 chrX:123860293:+ SGMS1^ENSG00000198964.14 chr10:50340464:- YES_LDAS 0.0102 GT 1.5058 AG 1.9086 ["INTERCHROMOSOMAL[chrX--chr10]"] XAF1--AC007066.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE XAF1^ENSG00000132530.17 chr17:6760601:+ AC007066.1^ENSG00000213216.2 chr9:123029471:- YES_LDAS 0.0051 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr9]"] WWP2--NPLOC4 1 0 1.00 0.00 ONLY_REF_SPLICE WWP2^ENSG00000198373.13 chr16:69799295:+ NPLOC4^ENSG00000182446.14 chr17:81559416:- YES_LDAS 0.0102 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr16--chr17]"] WWP1--UGP2 1 0 0.50 0.00 INCL_NON_REF_SPLICE WWP1^ENSG00000123124.14 chr8:86431672:+ UGP2^ENSG00000169764.16 chr2:63887994:+ NO_LDAS 0.0051 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr8--chr2]"] WWOX--BANP 1 0 1.00 0.00 ONLY_REF_SPLICE WWOX^ENSG00000186153.17 chr16:78432752:+ BANP^ENSG00000172530.20 chr16:88072069:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr16:8.74Mb]"] WDSUB1--TRAPPC9 1 0 1.00 0.00 ONLY_REF_SPLICE WDSUB1^ENSG00000196151.11 chr2:159279761:- TRAPPC9^ENSG00000167632.18 chr8:140360193:- NO_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr8]"] WDR82--SHISA5 1 0 1.00 0.00 INCL_NON_REF_SPLICE WDR82^ENSG00000164091.12 chr3:52278371:- SHISA5^ENSG00000164054.15 chr3:48469421:- YES_LDAS 0.0102 GC 1.5546 AG 1.4566 ["INTRACHROMOSOMAL[chr3:3.75Mb]"] WDR82--FLVCR1 1 0 1.00 0.00 ONLY_REF_SPLICE WDR82^ENSG00000164091.12 chr3:52284528:- FLVCR1^ENSG00000162769.13 chr1:212872678:+ YES_LDAS 0.0102 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr3--chr1]"] WDR77--AC016596.2 1 0 0.20 0.00 INCL_NON_REF_SPLICE WDR77^ENSG00000116455.14 chr1:111449081:- AC016596.2^ENSG00000264281.3 chr5:55944698:+ NO_LDAS 0.002 GT 1.9329 AG 1.3383 ["INTERCHROMOSOMAL[chr1--chr5]"] WDR75--INTS13 1 0 1.00 0.00 ONLY_REF_SPLICE WDR75^ENSG00000115368.10 chr2:189470245:+ INTS13^ENSG00000064102.15 chr12:26917441:- YES_LDAS 0.0102 GT 1.6402 AG 1.7056 ["INTERCHROMOSOMAL[chr2--chr12]"] WDR70--YTHDF2 1 0 1.00 0.00 ONLY_REF_SPLICE WDR70^ENSG00000082068.9 chr5:37605238:+ YTHDF2^ENSG00000198492.16 chr1:28768929:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr1]"] WDR70--OR2M3 1 0 1.00 0.00 INCL_NON_REF_SPLICE WDR70^ENSG00000082068.9 chr5:37516590:+ OR2M3^ENSG00000228198.3 chr1:248210228:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr1]"] WDR62--CRTC3 1 0 1.00 0.00 ONLY_REF_SPLICE WDR62^ENSG00000075702.19 chr19:36068010:+ CRTC3^ENSG00000140577.16 chr15:90600308:+ YES_LDAS 0.0102 GT 1.9656 AG 1.3753 ["INTERCHROMOSOMAL[chr19--chr15]"] WDR6--GNAI3 1 0 0.50 0.00 INCL_NON_REF_SPLICE WDR6^ENSG00000178252.18 chr3:49012245:+ GNAI3^ENSG00000065135.12 chr1:109573737:+ NO_LDAS 0.0051 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr1]"] WDR59--PARD3 1 0 1.00 0.00 ONLY_REF_SPLICE WDR59^ENSG00000103091.15 chr16:74903947:- PARD3^ENSG00000148498.16 chr10:34348115:- YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr10]"] WDR5--NACA 1 0 1.00 0.00 ONLY_REF_SPLICE WDR5^ENSG00000196363.10 chr9:134136200:+ NACA^ENSG00000196531.14 chr12:56714687:- YES_LDAS 0.0102 GT 1.2867 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr12]"] WDR45B--FAM111A 1 0 1.00 0.00 ONLY_REF_SPLICE WDR45B^ENSG00000141580.16 chr17:82627204:- FAM111A^ENSG00000166801.16 chr11:59148836:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr11]"] WDR33--AC108749.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE WDR33^ENSG00000136709.12 chr2:127770778:- AC108749.1^ENSG00000239572.3 chr3:87711858:- NO_LDAS 0.0102 GT 1.5656 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr3]"] WDR27--PHF10 1 0 1.00 0.00 ONLY_REF_SPLICE WDR27^ENSG00000184465.16 chr6:169632947:- PHF10^ENSG00000130024.15 chr6:169718918:- YES_LDAS 0.0102 GT 1.6729 AG 1.6729 ["DEEPEST2019","INTRACHROMOSOMAL[chr6:0.00Mb]","LOCAL_REARRANGEMENT:-:[1835]"] WDR24--FAM193B 1 0 1.00 0.00 INCL_NON_REF_SPLICE WDR24^ENSG00000127580.17 chr16:687323:- FAM193B^ENSG00000146067.16 chr5:177524219:- NO_LDAS 0.0102 GC 1.9899 AG 1.5656 ["INTERCHROMOSOMAL[chr16--chr5]"] WDR12--XIAP 1 0 1.00 0.00 ONLY_REF_SPLICE WDR12^ENSG00000138442.10 chr2:202907865:- XIAP^ENSG00000101966.13 chrX:123885631:+ YES_LDAS 0.0102 GT 1.5546 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chrX]"] WDFY3--NEPRO 1 0 1.00 0.00 ONLY_REF_SPLICE WDFY3^ENSG00000163625.16 chr4:84713159:- NEPRO^ENSG00000163608.15 chr3:113006004:- YES_LDAS 0.0102 GT 1.5546 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr3]"] WBP1L--FAM156A 1 0 0.50 0.00 ONLY_REF_SPLICE WBP1L^ENSG00000166272.18 chr10:102744143:+ FAM156A^ENSG00000268350.7 chrX:52956346:- YES_LDAS 0.0051 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chrX]"] WASL--POT1 1 0 1.00 0.00 ONLY_REF_SPLICE WASL^ENSG00000106299.8 chr7:123748618:- POT1^ENSG00000128513.16 chr7:124859112:- YES_LDAS 0.0102 GT 1.7819 AG 1.9219 ["INTRACHROMOSOMAL[chr7:1.07Mb]"] WASHC3--CABLES1 1 0 1.00 0.00 ONLY_REF_SPLICE WASHC3^ENSG00000120860.11 chr12:102050189:- CABLES1^ENSG00000134508.12 chr18:23257227:+ NO_LDAS 0.0102 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr12--chr18]"] WASHC2C--TP73-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE WASHC2C^ENSG00000172661.19 chr10:45727464:+ TP73-AS1^ENSG00000227372.12 chr1:3741548:- NO_LDAS 0.0102 GT 1.5628 AG 1.6402 ["INTERCHROMOSOMAL[chr10--chr1]"] WASH3P--WDR1 1 0 0.17 0.00 ONLY_REF_SPLICE WASH3P^ENSG00000185596.16 chr15:101966223:+ WDR1^ENSG00000071127.17 chr4:10087940:- NO_LDAS 0.0017 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr4]"] WASH2P--RPS6KB1 1 0 0.14 0.00 ONLY_REF_SPLICE WASH2P^ENSG00000146556.14 chr2:113588703:+ RPS6KB1^ENSG00000108443.14 chr17:59945406:+ YES_LDAS 0.0014 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr17]"] WAPL--RSL1D1 1 0 1.00 0.00 INCL_NON_REF_SPLICE WAPL^ENSG00000062650.20 chr10:86473899:- RSL1D1^ENSG00000171490.13 chr16:11837986:- YES_LDAS 0.0102 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr10--chr16]"] WAC--PIP4K2A 1 0 1.00 0.00 ONLY_REF_SPLICE WAC^ENSG00000095787.24 chr10:28535757:+ PIP4K2A^ENSG00000150867.14 chr10:22550772:- YES_LDAS 0.0102 GT 1.3383 AG 1.7819 ["INTRACHROMOSOMAL[chr10:5.82Mb]"] VTI1A--AEBP2 1 0 1.00 0.00 ONLY_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112538330:+ AEBP2^ENSG00000139154.16 chr12:19462510:+ NO_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr12]"] VRK3--ARHGAP23 1 0 1.00 0.00 ONLY_REF_SPLICE VRK3^ENSG00000105053.11 chr19:49988372:- ARHGAP23^ENSG00000275832.5 chr17:38471863:+ YES_LDAS 0.0102 GT 1.2419 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr17]"] VRK2--CCR10 1 0 1.00 0.00 INCL_NON_REF_SPLICE VRK2^ENSG00000028116.18 chr2:58046821:+ CCR10^ENSG00000184451.5 chr17:42682894:- NO_LDAS 0.0102 GT 1.8323 AG 1.7232 ["INTERCHROMOSOMAL[chr2--chr17]"] VRK1--CDYL 1 0 1.00 0.00 ONLY_REF_SPLICE VRK1^ENSG00000100749.9 chr14:96860735:+ CDYL^ENSG00000153046.18 chr6:4891713:+ YES_LDAS 0.0102 GT 1.2366 AG 1.5656 ["INTERCHROMOSOMAL[chr14--chr6]"] VPS53--CMPK1 1 0 1.00 0.00 ONLY_REF_SPLICE VPS53^ENSG00000141252.21 chr17:623533:- CMPK1^ENSG00000162368.13 chr1:47368469:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr1]"] VPS4B--DDI2 1 0 1.00 0.00 ONLY_REF_SPLICE VPS4B^ENSG00000119541.10 chr18:63399242:- DDI2^ENSG00000197312.12 chr1:15659837:+ YES_LDAS 0.0102 GT 1.9656 AG 1.3996 ["INTERCHROMOSOMAL[chr18--chr1]"] VPS45--PRPF3 1 0 1.00 0.00 ONLY_REF_SPLICE VPS45^ENSG00000136631.15 chr1:150110627:+ PRPF3^ENSG00000117360.13 chr1:150332684:+ YES_LDAS 0.0102 GT 1.4566 AG 1.8295 ["INTRACHROMOSOMAL[chr1:0.18Mb]"] VPS37A--TMEM135 1 0 1.00 0.00 ONLY_REF_SPLICE VPS37A^ENSG00000155975.10 chr8:17248417:+ TMEM135^ENSG00000166575.17 chr11:87067694:+ NO_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr11]"] VPS33A--OSGIN2 1 0 1.00 0.00 ONLY_REF_SPLICE VPS33A^ENSG00000139719.11 chr12:122261261:- OSGIN2^ENSG00000164823.11 chr8:89909567:+ NO_LDAS 0.0102 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr8]"] VPS26A--TMEM258 1 0 1.00 0.00 ONLY_REF_SPLICE VPS26A^ENSG00000122958.15 chr10:69133047:+ TMEM258^ENSG00000134825.16 chr11:61790602:- YES_LDAS 0.0102 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr11]"] VPS26A--SRGN 1 0 1.00 0.00 ONLY_REF_SPLICE VPS26A^ENSG00000122958.15 chr10:69124280:+ SRGN^ENSG00000122862.5 chr10:69097084:+ NO_LDAS 0.0102 GT 1.9219 AG 1.9899 ["INTRACHROMOSOMAL[chr10:0.02Mb]","LOCAL_REARRANGEMENT:+:[18707]"] VPS13A--POLE2 1 0 1.00 0.00 ONLY_REF_SPLICE VPS13A^ENSG00000197969.14 chr9:77228264:+ POLE2^ENSG00000100479.13 chr14:49674427:- YES_LDAS 0.0102 GT 1.5546 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr14]"] VKORC1L1--PISD 1 0 1.00 0.00 ONLY_REF_SPLICE VKORC1L1^ENSG00000196715.7 chr7:65873565:+ PISD^ENSG00000241878.11 chr22:31626016:- YES_LDAS 0.0102 GT 1.6729 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr22]"] VEZT--METTL25 1 0 1.00 0.00 ONLY_REF_SPLICE VEZT^ENSG00000028203.18 chr12:95218345:+ METTL25^ENSG00000127720.8 chr12:82386803:+ NO_LDAS 0.0102 GT 1.7056 AG 1.8295 ["INTRACHROMOSOMAL[chr12:12.74Mb]"] VEGFB--CTDSP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE VEGFB^ENSG00000173511.10 chr11:64235829:+ CTDSP2^ENSG00000175215.11 chr12:57846524:- NO_LDAS 0.0102 GT 1.8256 AG 1.2310 ["INTERCHROMOSOMAL[chr11--chr12]"] VCL--WASHC2A 1 0 0.50 0.00 ONLY_REF_SPLICE VCL^ENSG00000035403.18 chr10:73998375:+ WASHC2A^ENSG00000099290.17 chr10:50127583:+ YES_LDAS 0.0051 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr10:23.86Mb]"] VAV1--RTN2 1 0 1.00 0.00 ONLY_REF_SPLICE VAV1^ENSG00000141968.8 chr19:6829918:+ RTN2^ENSG00000125744.12 chr19:45486113:- YES_LDAS 0.0102 GT 1.4566 AG 1.9086 ["INTRACHROMOSOMAL[chr19:38.63Mb]"] VAPB--TM9SF4 1 0 1.00 0.00 ONLY_REF_SPLICE VAPB^ENSG00000124164.16 chr20:58389517:+ TM9SF4^ENSG00000101337.16 chr20:32133013:+ NO_LDAS 0.0102 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr20:26.22Mb]"] VAMP1--MSL3 1 0 1.00 0.00 ONLY_REF_SPLICE VAMP1^ENSG00000139190.17 chr12:6464890:- MSL3^ENSG00000005302.19 chrX:11759793:+ YES_LDAS 0.0102 GT 1.5301 AG 1.3710 ["INTERCHROMOSOMAL[chr12--chrX]"] VAC14--TTC37 1 0 1.00 0.00 ONLY_REF_SPLICE VAC14^ENSG00000103043.15 chr16:70800797:- TTC37^ENSG00000198677.12 chr5:95516586:- YES_LDAS 0.0102 GT 1.8323 AG 1.5656 ["INTERCHROMOSOMAL[chr16--chr5]"] UVSSA--NELFA 1 0 1.00 0.00 ONLY_REF_SPLICE UVSSA^ENSG00000163945.19 chr4:1348189:+ NELFA^ENSG00000185049.16 chr4:1991715:- YES_LDAS 0.0102 GT 1.6729 AG 1.9329 ["INTRACHROMOSOMAL[chr4:0.59Mb]"] USP9Y--UTY 1 0 1.00 0.00 ONLY_REF_SPLICE USP9Y^ENSG00000114374.13 chrY:12726793:+ UTY^ENSG00000183878.15 chrY:13336335:- YES_LDAS 0.0102 GT 1.7056 AG 1.9329 ["INTRACHROMOSOMAL[chrY:0.39Mb]"] USP9X--CASK 1 0 1.00 0.00 ONLY_REF_SPLICE USP9X^ENSG00000124486.13 chrX:41086109:+ CASK^ENSG00000147044.23 chrX:41853227:- YES_LDAS 0.0102 GT 1.5656 AG 1.8256 ["INTRACHROMOSOMAL[chrX:0.28Mb]"] USP7--ZC3H7A 1 0 1.00 0.00 ONLY_REF_SPLICE USP7^ENSG00000187555.16 chr16:8963207:- ZC3H7A^ENSG00000122299.12 chr16:11782388:- YES_LDAS 0.0102 GT 1.7056 AG 1.8323 ["INTRACHROMOSOMAL[chr16:2.78Mb]"] USP6NL--MINDY3 1 0 1.00 0.00 ONLY_REF_SPLICE USP6NL^ENSG00000148429.14 chr10:11527500:- MINDY3^ENSG00000148481.14 chr10:15847943:- YES_LDAS 0.0102 GT 1.8295 AG 1.2729 ["INTRACHROMOSOMAL[chr10:4.17Mb]"] USP6NL--MIA2 1 0 1.00 0.00 ONLY_REF_SPLICE USP6NL^ENSG00000148429.14 chr10:11611443:- MIA2^ENSG00000150527.17 chr14:39276934:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr14]"] USP47--BTBD10 1 0 1.00 0.00 ONLY_REF_SPLICE USP47^ENSG00000170242.19 chr11:11842224:+ BTBD10^ENSG00000148925.11 chr11:13421838:- YES_LDAS 0.0102 GT 1.9329 AG 1.8323 ["INTRACHROMOSOMAL[chr11:1.43Mb]"] USP42--COX6B1 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP42^ENSG00000106346.11 chr7:6157300:+ COX6B1^ENSG00000126267.11 chr19:35654571:+ NO_LDAS 0.0102 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr19]"] USP4--DAPK3 1 0 1.00 0.00 ONLY_REF_SPLICE USP4^ENSG00000114316.13 chr3:49324702:- DAPK3^ENSG00000167657.14 chr19:3961161:- YES_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr19]"] USP36--SPG7 1 0 1.00 0.00 ONLY_REF_SPLICE USP36^ENSG00000055483.19 chr17:78803385:- SPG7^ENSG00000197912.16 chr16:89544648:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr16]"] USP3--USP6NL 1 0 1.00 0.00 ONLY_REF_SPLICE USP3^ENSG00000140455.17 chr15:63504830:+ USP6NL^ENSG00000148429.14 chr10:11597717:- YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr10]"] USP3--SOS2 1 0 1.00 0.00 ONLY_REF_SPLICE USP3^ENSG00000140455.17 chr15:63504830:+ SOS2^ENSG00000100485.12 chr14:50204409:- YES_LDAS 0.0102 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr14]"] USP24--MIR9-1HG 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP24^ENSG00000162402.14 chr1:55154671:- MIR9-1HG^ENSG00000125462.19 chr1:156430565:- NO_LDAS 0.0102 GT 1.9656 AG 1.5628 ["INTRACHROMOSOMAL[chr1:101.19Mb]"] USP24--AP000944.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP24^ENSG00000162402.14 chr1:55147649:- AP000944.4^ENSG00000278144.1 chr11:65423380:+ NO_LDAS 0.0102 GT 1.9899 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chr11]"] USP12--LINC02340 1 0 1.00 0.00 ONLY_REF_SPLICE USP12^ENSG00000152484.14 chr13:27116516:- LINC02340^ENSG00000275294.4 chr13:27220855:- YES_LDAS 0.0102 GT 1.7465 AG 1.9329 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr13:0.01Mb]","LOCAL_REARRANGEMENT:-:[6452]"] USP12--ECPAS 1 0 1.00 0.00 ONLY_REF_SPLICE USP12^ENSG00000152484.14 chr13:27171592:- ECPAS^ENSG00000136813.14 chr9:111473000:- NO_LDAS 0.0102 GT 1.9086 AG 1.3996 ["INTERCHROMOSOMAL[chr13--chr9]"] USP12--AC011979.1 1 0 0.14 0.00 INCL_NON_REF_SPLICE USP12^ENSG00000152484.14 chr13:27171592:- AC011979.1^ENSG00000239470.3 chr11:9660426:+ YES_LDAS 0.0014 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr11]"] USP1--XPO6 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP1^ENSG00000162607.13 chr1:62450487:+ XPO6^ENSG00000169180.12 chr16:28181031:- NO_LDAS 0.0102 GT 1.5301 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr16]"] USO1--PLAC8 1 0 1.00 0.00 ONLY_REF_SPLICE USO1^ENSG00000138768.15 chr4:75724885:+ PLAC8^ENSG00000145287.11 chr4:83094791:- YES_LDAS 0.0102 GT 1.5656 AG 1.7465 ["INTRACHROMOSOMAL[chr4:7.28Mb]"] USO1--G3BP2 1 0 1.00 0.00 ONLY_REF_SPLICE USO1^ENSG00000138768.15 chr4:75724885:+ G3BP2^ENSG00000138757.15 chr4:75662049:- YES_LDAS 0.0102 GT 1.5656 AG 1.9219 ["INTRACHROMOSOMAL[chr4:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[12]"] UQCRH--SALL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46303820:+ SALL2^ENSG00000165821.12 chr14:21523432:- NO_LDAS 0.0102 GT 1.7968 AG 1.2729 ["INTERCHROMOSOMAL[chr1--chr14]"] UQCRC2--GCNA 1 0 1.00 0.00 ONLY_REF_SPLICE UQCRC2^ENSG00000140740.11 chr16:21976243:+ GCNA^ENSG00000147174.11 chrX:71594331:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr16--chrX]"] UQCC2--PPP2R2A 1 0 1.00 0.00 ONLY_REF_SPLICE UQCC2^ENSG00000137288.10 chr6:33700444:- PPP2R2A^ENSG00000221914.11 chr8:26293666:+ YES_LDAS 0.0102 GT 1.9656 AG 1.4716 ["INTERCHROMOSOMAL[chr6--chr8]"] UPF3A--NAXD 1 0 1.00 0.00 ONLY_REF_SPLICE UPF3A^ENSG00000169062.15 chr13:114282943:+ NAXD^ENSG00000213995.12 chr13:110622216:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr13:3.64Mb]"] UNKL--SQSTM1 1 0 1.00 0.00 ONLY_REF_SPLICE UNKL^ENSG00000059145.19 chr16:1390632:- SQSTM1^ENSG00000161011.20 chr5:179822958:+ YES_LDAS 0.0102 GT 1.5301 AG 1.7968 ["INTERCHROMOSOMAL[chr16--chr5]"] UNK--TXNL4A 1 0 1.00 0.00 ONLY_REF_SPLICE UNK^ENSG00000132478.10 chr17:75784984:+ TXNL4A^ENSG00000141759.15 chr18:79973856:- NO_LDAS 0.0102 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr17--chr18]"] UNC5C--PRKAR1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE UNC5C^ENSG00000182168.15 chr4:95169042:- PRKAR1B^ENSG00000188191.15 chr7:551470:- NO_LDAS 0.0102 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr4--chr7]"] UMAD1--GLCCI1 1 0 1.00 0.00 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7801743:+ GLCCI1^ENSG00000106415.13 chr7:8022483:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9899 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[776]"] UHRF2--KDM4C 1 0 1.00 0.00 ONLY_REF_SPLICE UHRF2^ENSG00000147854.17 chr9:6482099:+ KDM4C^ENSG00000107077.19 chr9:6880012:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9086 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr9:0.21Mb]"] UHRF2--KDM4C 1 0 1.00 0.00 ONLY_REF_SPLICE UHRF2^ENSG00000147854.17 chr9:6413643:+ KDM4C^ENSG00000107077.19 chr9:6849507:+ YES_LDAS 0.0102 GT 1.8062 AG 1.4566 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr9:0.21Mb]"] UHRF1BP1--SEC11A 1 0 1.00 0.00 ONLY_REF_SPLICE UHRF1BP1^ENSG00000065060.17 chr6:34835464:+ SEC11A^ENSG00000140612.14 chr15:84691644:- YES_LDAS 0.0102 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr15]"] UGGT2--DGKH 1 0 1.00 0.00 ONLY_REF_SPLICE UGGT2^ENSG00000102595.20 chr13:96023040:- DGKH^ENSG00000102780.17 chr13:42155291:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5656 ["INTRACHROMOSOMAL[chr13:53.55Mb]"] UGCG--ECPAS 1 0 1.00 0.00 ONLY_REF_SPLICE UGCG^ENSG00000148154.10 chr9:111897313:+ ECPAS^ENSG00000136813.14 chr9:111397153:- YES_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr9:0.41Mb]"] UBXN7--SYNRG 1 0 1.00 0.00 ONLY_REF_SPLICE UBXN7^ENSG00000163960.12 chr3:196432327:- SYNRG^ENSG00000275066.5 chr17:37600403:- YES_LDAS 0.0102 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr3--chr17]"] UBTF--SLC9A9 1 0 1.00 0.00 ONLY_REF_SPLICE UBTF^ENSG00000108312.15 chr17:44211873:- SLC9A9^ENSG00000181804.15 chr3:143266929:- NO_LDAS 0.0102 GT 1.4716 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr3]"] UBTD2--TRERF1 1 0 1.00 0.00 ONLY_REF_SPLICE UBTD2^ENSG00000168246.6 chr5:172283596:- TRERF1^ENSG00000124496.12 chr6:42363079:- YES_LDAS 0.0102 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr6]"] UBQLN4--KMT5A 1 0 0.50 0.00 INCL_NON_REF_SPLICE UBQLN4^ENSG00000160803.8 chr1:156053624:- KMT5A^ENSG00000183955.13 chr12:123388742:+ NO_LDAS 0.0051 GT 1.6895 AG 1.2310 ["INTERCHROMOSOMAL[chr1--chr12]"] UBQLN4--CDC42SE2 1 0 1.00 0.00 ONLY_REF_SPLICE UBQLN4^ENSG00000160803.8 chr1:156053594:- CDC42SE2^ENSG00000158985.14 chr5:131390993:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr5]"] UBL5--CATSPER2 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBL5^ENSG00000198258.11 chr19:9828389:+ CATSPER2^ENSG00000166762.19 chr15:43647170:- NO_LDAS 0.0102 GC 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr15]"] UBE3D--MARS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBE3D^ENSG00000118420.17 chr6:83063376:- MARS1^ENSG00000166986.15 chr12:57511524:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr12]"] UBE2V2--TNFRSF10B 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2V2^ENSG00000169139.12 chr8:48049978:+ TNFRSF10B^ENSG00000120889.13 chr8:23030872:- YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr8:24.94Mb]"] UBE2H--CUL1 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2H^ENSG00000186591.13 chr7:129952503:- CUL1^ENSG00000055130.17 chr7:148753976:+ YES_LDAS 0.0102 GT 1.9219 AG 1.6895 ["INTRACHROMOSOMAL[chr7:18.74Mb]"] UBE2E2--CLASP2 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2E2^ENSG00000182247.10 chr3:23208875:+ CLASP2^ENSG00000163539.17 chr3:33644903:- YES_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr3:9.90Mb]"] UBE2D2--PWWP2B 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2D2^ENSG00000131508.16 chr5:139526612:+ PWWP2B^ENSG00000171813.14 chr10:132404626:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5850 ["INTERCHROMOSOMAL[chr5--chr10]"] UBC--CENPJ 1 0 1.00 0.00 ONLY_REF_SPLICE UBC^ENSG00000150991.15 chr12:124914587:- CENPJ^ENSG00000151849.16 chr13:24913091:- YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr12--chr13]"] UBAP1--PLEKHH3 1 0 1.00 0.00 ONLY_REF_SPLICE UBAP1^ENSG00000165006.14 chr9:34179240:+ PLEKHH3^ENSG00000068137.15 chr17:42668303:- YES_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr17]"] UBA6-AS1--CHMP1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBA6-AS1^ENSG00000248049.7 chr4:67798709:+ CHMP1A^ENSG00000131165.16 chr16:89647331:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr16]"] UBA6--RCHY1 1 0 1.00 0.00 ONLY_REF_SPLICE UBA6^ENSG00000033178.13 chr4:67696645:- RCHY1^ENSG00000163743.13 chr4:75494179:- YES_LDAS 0.0102 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr4:7.78Mb]"] UBA2--ZNF430 1 0 1.00 0.00 ONLY_REF_SPLICE UBA2^ENSG00000126261.13 chr19:34428570:+ ZNF430^ENSG00000118620.13 chr19:21056631:+ YES_LDAS 0.0102 GT 1.8295 AG 1.4566 ["INTRACHROMOSOMAL[chr19:13.37Mb]"] UBA2--SAMHD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBA2^ENSG00000126261.13 chr19:34467014:+ SAMHD1^ENSG00000101347.10 chr20:36892955:- NO_LDAS 0.0102 GT 1.5546 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr20]"] UBA2--MARCHF7 1 0 1.00 0.00 ONLY_REF_SPLICE UBA2^ENSG00000126261.13 chr19:34428570:+ MARCHF7^ENSG00000136536.15 chr2:159747805:+ NO_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr2]"] UBA2--FAM86B3P 1 0 1.00 0.00 ONLY_REF_SPLICE UBA2^ENSG00000126261.13 chr19:34434968:+ FAM86B3P^ENSG00000173295.8 chr8:8244099:+ YES_LDAS 0.0102 GT 1.6729 AG 1.3383 ["INTERCHROMOSOMAL[chr19--chr8]"] U2SURP--NAA50 1 0 1.00 0.00 ONLY_REF_SPLICE U2SURP^ENSG00000163714.18 chr3:143038960:+ NAA50^ENSG00000121579.13 chr3:113724095:- YES_LDAS 0.0102 GT 1.2366 AG 1.9656 ["INTRACHROMOSOMAL[chr3:29.22Mb]"] TYSND1--SAR1A 1 0 1.00 0.00 ONLY_REF_SPLICE TYSND1^ENSG00000156521.14 chr10:70142668:- SAR1A^ENSG00000079332.15 chr10:70161069:- YES_LDAS 0.0102 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr10:0.00Mb]","LOCAL_REARRANGEMENT:-:[589]"] TXNDC15--NR3C1 1 0 1.00 0.00 ONLY_REF_SPLICE TXNDC15^ENSG00000113621.15 chr5:134874530:+ NR3C1^ENSG00000113580.15 chr5:143400852:- NO_LDAS 0.0102 GT 1.6402 AG 1.7968 ["INTRACHROMOSOMAL[chr5:8.38Mb]"] TXNDC15--CATSPER3 1 0 1.00 0.00 ONLY_REF_SPLICE TXNDC15^ENSG00000113621.15 chr5:134874530:+ CATSPER3^ENSG00000152705.8 chr5:135009371:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8892 ["INTRACHROMOSOMAL[chr5:0.07Mb]","NEIGHBORS[66272]"] TXNDC11--RSL1D1 1 0 1.00 0.00 ONLY_REF_SPLICE TXNDC11^ENSG00000153066.13 chr16:11687857:- RSL1D1^ENSG00000171490.13 chr16:11847806:- YES_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.09Mb]","LOCAL_REARRANGEMENT:-:[90993]"] TXN--IARS1 1 0 1.00 0.00 ONLY_REF_SPLICE TXN^ENSG00000136810.13 chr9:110256412:- IARS1^ENSG00000196305.18 chr9:92280893:- NO_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr9:17.95Mb]"] TWSG1--FUT8 1 0 1.00 0.00 ONLY_REF_SPLICE TWSG1^ENSG00000128791.12 chr18:9360071:+ FUT8^ENSG00000033170.17 chr14:65721775:+ NO_LDAS 0.0102 GT 1.7056 AG 1.7056 ["INTERCHROMOSOMAL[chr18--chr14]"] TWSG1--ANKRD12 1 0 1.00 0.00 ONLY_REF_SPLICE TWSG1^ENSG00000128791.12 chr18:9360071:+ ANKRD12^ENSG00000101745.17 chr18:9263790:+ YES_LDAS 0.0102 GT 1.7056 AG 1.5058 ["INTRACHROMOSOMAL[chr18:0.05Mb]","LOCAL_REARRANGEMENT:+:[48782]"] TVP23C--TEKT3 1 0 1.00 0.00 ONLY_REF_SPLICE TVP23C^ENSG00000175106.17 chr17:15540433:- TEKT3^ENSG00000125409.13 chr17:15331614:- YES_LDAS 0.0102 GT 1.8323 AG 1.7465 ["INTRACHROMOSOMAL[chr17:0.16Mb]"] TVP23B--CLEC16A 1 0 0.50 0.00 ONLY_REF_SPLICE TVP23B^ENSG00000171928.14 chr17:18804266:+ CLEC16A^ENSG00000038532.16 chr16:11020193:+ NO_LDAS 0.0051 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr16]"] TVP23B--AL049634.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TVP23B^ENSG00000171928.14 chr17:18791034:+ AL049634.3^ENSG00000271523.1 chr20:1591633:+ NO_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr20]"] TUT7--ODR4 1 0 1.00 0.00 ONLY_REF_SPLICE TUT7^ENSG00000083223.18 chr9:86303086:- ODR4^ENSG00000157181.16 chr1:186406083:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr1]"] TUT1--INTU 1 0 1.00 0.00 INCL_NON_REF_SPLICE TUT1^ENSG00000149016.16 chr11:62581102:- INTU^ENSG00000164066.13 chr4:127687777:+ NO_LDAS 0.0102 GT 1.8256 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr4]"] TUG1--C3orf38 1 0 1.00 0.00 ONLY_REF_SPLICE TUG1^ENSG00000253352.10 chr22:30973587:+ C3orf38^ENSG00000179021.10 chr3:88156021:+ YES_LDAS 0.0102 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr22--chr3]"] TUBGCP2--MUTYH 1 0 1.00 0.00 ONLY_REF_SPLICE TUBGCP2^ENSG00000130640.14 chr10:133308823:- MUTYH^ENSG00000132781.19 chr1:45334511:- YES_LDAS 0.0102 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr1]"] TTYH3--ADAP1 1 0 1.00 0.00 ONLY_REF_SPLICE TTYH3^ENSG00000136295.15 chr7:2632278:+ ADAP1^ENSG00000105963.15 chr7:926644:- YES_LDAS 0.0102 GT 1.7819 AG 1.7968 ["INTRACHROMOSOMAL[chr7:1.68Mb]"] TTLL3--ARPC4 1 0 1.00 0.00 ONLY_REF_SPLICE TTLL3^ENSG00000214021.16 chr3:9813345:+ ARPC4^ENSG00000241553.13 chr3:9803843:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:+:[985]"] TTLL12--HSD17B10 1 0 1.00 0.00 ONLY_REF_SPLICE TTLL12^ENSG00000100304.13 chr22:43173715:- HSD17B10^ENSG00000072506.13 chrX:53432411:- YES_LDAS 0.0102 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chrX]"] TTF1--UGP2 1 0 0.50 0.00 INCL_NON_REF_SPLICE TTF1^ENSG00000125482.13 chr9:132401526:- UGP2^ENSG00000169764.16 chr2:63887994:+ NO_LDAS 0.0051 GT 1.5219 AG 1.8062 ["INTERCHROMOSOMAL[chr9--chr2]"] TTC37--KHDRBS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TTC37^ENSG00000198677.12 chr5:95517046:- KHDRBS1^ENSG00000121774.18 chr1:32014122:+ NO_LDAS 0.0102 AT 1.7056 AC 1.5329 ["INTERCHROMOSOMAL[chr5--chr1]"] TTC33--PHF14 1 0 1.00 0.00 ONLY_REF_SPLICE TTC33^ENSG00000113638.14 chr5:40746798:- PHF14^ENSG00000106443.17 chr7:11111350:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr5--chr7]"] TSPYL2--TFPT 1 0 1.00 0.00 INCL_NON_REF_SPLICE TSPYL2^ENSG00000184205.14 chrX:53086142:+ TFPT^ENSG00000105619.14 chr19:54107135:- NO_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chrX--chr19]"] TSPAN5--CHCHD3 1 0 0.50 0.00 ONLY_REF_SPLICE TSPAN5^ENSG00000168785.8 chr4:98658146:- CHCHD3^ENSG00000106554.13 chr7:133024627:- YES_LDAS 0.0051 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr7]"] TSPAN12--SLC25A40 1 0 1.00 0.00 ONLY_REF_SPLICE TSPAN12^ENSG00000106025.9 chr7:120856698:- SLC25A40^ENSG00000075303.13 chr7:87860640:- YES_LDAS 0.0102 GT 1.8295 AG 1.7968 ["INTRACHROMOSOMAL[chr7:32.91Mb]"] TSPAN12--PRELID3B 1 0 1.00 0.00 INCL_NON_REF_SPLICE TSPAN12^ENSG00000106025.9 chr7:120787989:- PRELID3B^ENSG00000101166.16 chr20:59037280:- NO_LDAS 0.0102 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr20]"] TSG101--CSDE1 1 0 1.00 0.00 ONLY_REF_SPLICE TSG101^ENSG00000074319.13 chr11:18502486:- CSDE1^ENSG00000009307.16 chr1:114738072:- YES_LDAS 0.0102 GT 1.9329 AG 1.5301 ["INTERCHROMOSOMAL[chr11--chr1]"] TSEN15--RGL1 1 0 1.00 0.00 ONLY_REF_SPLICE TSEN15^ENSG00000198860.14 chr1:184054863:+ RGL1^ENSG00000143344.16 chr1:183880616:+ NO_LDAS 0.0102 GT 1.8323 AG 1.9086 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr1:0.12Mb]"] TSC22D4--CLIP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TSC22D4^ENSG00000166925.9 chr7:100474302:- CLIP1^ENSG00000130779.22 chr12:122309866:- NO_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr12]"] TSC1--DENND5B 1 0 1.00 0.00 ONLY_REF_SPLICE TSC1^ENSG00000165699.15 chr9:132944543:- DENND5B^ENSG00000170456.16 chr12:31433248:- YES_LDAS 0.0102 GT 1.3753 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr12]"] TRUB1--NHLRC2 1 0 1.00 0.00 ONLY_REF_SPLICE TRUB1^ENSG00000165832.6 chr10:114942743:+ NHLRC2^ENSG00000196865.4 chr10:113876521:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7232 ["INTRACHROMOSOMAL[chr10:1.02Mb]"] TRRAP--STAT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRRAP^ENSG00000196367.14 chr7:98930733:+ STAT2^ENSG00000170581.14 chr12:56344135:- NO_LDAS 0.0102 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr12]"] TRRAP--LEMD2 1 0 1.00 0.00 ONLY_REF_SPLICE TRRAP^ENSG00000196367.14 chr7:98955304:+ LEMD2^ENSG00000161904.12 chr6:33786774:- YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr6]"] TRPV2--RPL10 1 0 0.50 0.00 INCL_NON_REF_SPLICE TRPV2^ENSG00000187688.15 chr17:16428915:+ RPL10^ENSG00000147403.18 chrX:154399487:+ YES_LDAS 0.0051 GC 1.4566 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chrX]"] TRPV2--ADAD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRPV2^ENSG00000187688.15 chr17:16423629:+ ADAD2^ENSG00000140955.11 chr16:84194901:+ NO_LDAS 0.0102 AT 1.8892 AC 1.2419 ["INTERCHROMOSOMAL[chr17--chr16]"] TROAP--IL2RG 1 0 1.00 0.00 ONLY_REF_SPLICE TROAP^ENSG00000135451.13 chr12:49329454:+ IL2RG^ENSG00000147168.13 chrX:71109390:- YES_LDAS 0.0102 GT 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chrX]"] TRNAU1AP--TRIM26 1 0 1.00 0.00 ONLY_REF_SPLICE TRNAU1AP^ENSG00000180098.9 chr1:28564834:+ TRIM26^ENSG00000234127.9 chr6:30186558:- YES_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr6]"] TRMU--TBC1D22A 1 0 1.00 0.00 ONLY_REF_SPLICE TRMU^ENSG00000100416.15 chr22:46337944:+ TBC1D22A^ENSG00000054611.14 chr22:46997634:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8256 ["INTRACHROMOSOMAL[chr22:0.41Mb]"] TRMT61B--MTIF2 1 0 1.00 0.00 ONLY_REF_SPLICE TRMT61B^ENSG00000171103.11 chr2:28869579:- MTIF2^ENSG00000085760.15 chr2:55262427:- YES_LDAS 0.0102 GT 1.7465 AG 1.7056 ["INTRACHROMOSOMAL[chr2:26.37Mb]"] TRMT1L--DPP10 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRMT1L^ENSG00000121486.12 chr1:185137606:- DPP10^ENSG00000175497.17 chr2:115746096:+ NO_LDAS 0.0102 GT 1.5656 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr2]"] TRIM52--SRP9 1 0 0.50 0.00 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- SRP9^ENSG00000143742.14 chr1:225777935:+ NO_LDAS 0.0051 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr1]"] TRIM52--PPIP5K2 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- PPIP5K2^ENSG00000145725.20 chr5:103190842:+ YES_LDAS 0.0102 GT 1.8892 AG 1.6729 ["INTRACHROMOSOMAL[chr5:78.04Mb]"] TRIM5--INTS4 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM5^ENSG00000132256.19 chr11:5678204:- INTS4^ENSG00000149262.17 chr11:77981576:- YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr11:71.94Mb]"] TRIM25--RILPL2 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM25^ENSG00000121060.18 chr17:56913392:- RILPL2^ENSG00000150977.11 chr12:123415921:- YES_LDAS 0.0102 GT 1.7819 AG 1.5546 ["INTERCHROMOSOMAL[chr17--chr12]"] TRIM24--DNAJB6 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM24^ENSG00000122779.18 chr7:138460912:+ DNAJB6^ENSG00000105993.15 chr7:157409795:+ YES_LDAS 0.0102 GT 1.8295 AG 1.7968 ["INTRACHROMOSOMAL[chr7:18.75Mb]"] TRERF1--CARMIL1 1 0 1.00 0.00 ONLY_REF_SPLICE TRERF1^ENSG00000124496.12 chr6:42451177:- CARMIL1^ENSG00000079691.18 chr6:25450339:+ YES_LDAS 0.0102 GT 1.5301 AG 1.8892 ["INTRACHROMOSOMAL[chr6:16.60Mb]"] TRAPPC9--UBC 1 0 1.00 0.00 ONLY_REF_SPLICE TRAPPC9^ENSG00000167632.18 chr8:139885879:- UBC^ENSG00000150991.15 chr12:124913774:- YES_LDAS 0.0102 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr12]"] TRAPPC6A--PANX2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRAPPC6A^ENSG00000007255.10 chr19:45164164:- PANX2^ENSG00000073150.14 chr22:50177142:+ NO_LDAS 0.0102 GT 1.5656 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr22]"] TRAPPC4--DDX6 1 0 0.50 0.00 ONLY_REF_SPLICE TRAPPC4^ENSG00000196655.12 chr11:119019317:+ DDX6^ENSG00000110367.13 chr11:118755503:- NO_LDAS 0.0051 GT 1.6895 AG 1.9656 ["INTRACHROMOSOMAL[chr11:0.23Mb]"] TRAPPC4--AP001042.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TRAPPC4^ENSG00000196655.12 chr11:119019317:+ AP001042.1^ENSG00000205622.11 chr21:38880054:- NO_LDAS 0.0051 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr21]"] TRAPPC10--STAB1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TRAPPC10^ENSG00000160218.13 chr21:44059137:+ STAB1^ENSG00000010327.10 chr3:52516692:+ NO_LDAS 0.0051 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr21--chr3]"] TRAFD1--DAGLB 1 0 1.00 0.00 ONLY_REF_SPLICE TRAFD1^ENSG00000135148.12 chr12:112148304:+ DAGLB^ENSG00000164535.15 chr7:6412883:- NO_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr7]"] TRAF7--NAXD 1 0 1.00 0.00 ONLY_REF_SPLICE TRAF7^ENSG00000131653.13 chr16:2168168:+ NAXD^ENSG00000213995.12 chr13:110638378:+ NO_LDAS 0.0102 GT 1.6895 AG 1.6402 ["INTERCHROMOSOMAL[chr16--chr13]"] TRAF7--KIF3B 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRAF7^ENSG00000131653.13 chr16:2155779:+ KIF3B^ENSG00000101350.8 chr20:32309713:+ NO_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr20]"] TRAF1--TYMSOS 1 0 1.00 0.00 ONLY_REF_SPLICE TRAF1^ENSG00000056558.11 chr9:120923705:- TYMSOS^ENSG00000176912.5 chr18:649964:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr18]"] TRAF1--ADK 1 0 1.00 0.00 ONLY_REF_SPLICE TRAF1^ENSG00000056558.11 chr9:120925936:- ADK^ENSG00000156110.15 chr10:74670183:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr10]"] TRABD--UGP2 1 0 0.50 0.00 INCL_NON_REF_SPLICE TRABD^ENSG00000170638.10 chr22:50197284:+ UGP2^ENSG00000169764.16 chr2:63887994:+ NO_LDAS 0.0051 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr22--chr2]"] TRA2B--PTPN4 1 0 1.00 0.00 ONLY_REF_SPLICE TRA2B^ENSG00000136527.18 chr3:185937825:- PTPN4^ENSG00000088179.9 chr2:119862536:+ YES_LDAS 0.0102 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr2]"] TRA2B--ADAP1 1 0 1.00 0.00 ONLY_REF_SPLICE TRA2B^ENSG00000136527.18 chr3:185937825:- ADAP1^ENSG00000105963.15 chr7:926644:- YES_LDAS 0.0102 GT 1.8062 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr7]"] TPTEP2--TCF4 1 0 1.00 0.00 ONLY_REF_SPLICE TPTEP2^ENSG00000244627.5 chr22:38380370:- TCF4^ENSG00000196628.20 chr18:55229076:- NO_LDAS 0.0102 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr22--chr18]"] TPTEP2--SYNRG 1 0 1.00 0.00 ONLY_REF_SPLICE TPTEP2^ENSG00000244627.5 chr22:38361399:- SYNRG^ENSG00000275066.5 chr17:37554059:- YES_LDAS 0.0102 GT 1.5850 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr17]"] TPTE2--MRPS31P2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TPTE2^ENSG00000132958.17 chr13:19482488:- MRPS31P2^ENSG00000232894.1 chr13:19559129:- YES_LDAS 0.0102 GT 1.8295 AG 1.8892 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","LOCAL_REARRANGEMENT:-:[15809]"] TPTE--UBE2D2 1 0 0.33 0.00 ONLY_REF_SPLICE TPTE^ENSG00000274391.5 chr21:10561191:+ UBE2D2^ENSG00000131508.16 chr5:139600372:+ YES_LDAS 0.0034 GT 1.5656 AG 1.8256 ["INTERCHROMOSOMAL[chr21--chr5]"] TPT1P9--TLE5 1 0 1.00 0.00 INCL_NON_REF_SPLICE TPT1P9^ENSG00000234782.3 chr9:118083262:- TLE5^ENSG00000104964.15 chr19:3062183:- NO_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr19]"] TPRA1--RNF41 1 0 1.00 0.00 INCL_NON_REF_SPLICE TPRA1^ENSG00000163870.16 chr3:127588030:- RNF41^ENSG00000181852.18 chr12:56208261:- YES_LDAS 0.0102 AT 1.9329 AC 1.9899 ["INTERCHROMOSOMAL[chr3--chr12]"] TPP2--UBAC2 1 0 1.00 0.00 ONLY_REF_SPLICE TPP2^ENSG00000134900.12 chr13:102597203:+ UBAC2^ENSG00000134882.16 chr13:99367787:+ YES_LDAS 0.0102 GT 1.8323 AG 1.7819 ["INTRACHROMOSOMAL[chr13:3.21Mb]"] TPM4--ZMYM2 1 0 1.00 0.00 ONLY_REF_SPLICE TPM4^ENSG00000167460.17 chr19:16076697:+ ZMYM2^ENSG00000121741.17 chr13:19959958:+ YES_LDAS 0.0102 GT 1.5058 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr13]"] TPM4--RAC2 1 0 1.00 0.00 ONLY_REF_SPLICE TPM4^ENSG00000167460.17 chr19:16076697:+ RAC2^ENSG00000128340.15 chr22:37226803:- NO_LDAS 0.0102 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr22]"] TPGS2--TVP23C 1 0 1.00 0.00 ONLY_REF_SPLICE TPGS2^ENSG00000134779.15 chr18:36798449:- TVP23C^ENSG00000175106.17 chr17:15503232:- YES_LDAS 0.0102 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr17]"] TPD52L2--SYNPO 1 0 1.00 0.00 INCL_NON_REF_SPLICE TPD52L2^ENSG00000101150.18 chr20:63887342:+ SYNPO^ENSG00000171992.13 chr5:150650010:+ NO_LDAS 0.0102 GT 1.0530 AG 1.9086 ["INTERCHROMOSOMAL[chr20--chr5]"] TPD52--SOX7 1 0 1.00 0.00 ONLY_REF_SPLICE TPD52^ENSG00000076554.15 chr8:80171425:- SOX7^ENSG00000171056.8 chr8:10726666:- YES_LDAS 0.0102 GT 1.5656 AG 1.6895 ["INTRACHROMOSOMAL[chr8:69.30Mb]"] TPD52--GTF2E1 1 0 1.00 0.00 ONLY_REF_SPLICE TPD52^ENSG00000076554.15 chr8:80171425:- GTF2E1^ENSG00000153767.10 chr3:120750523:+ YES_LDAS 0.0102 GT 1.5656 AG 1.5058 ["INTERCHROMOSOMAL[chr8--chr3]"] TP73--SKI 1 0 1.00 0.00 ONLY_REF_SPLICE TP73^ENSG00000078900.15 chr1:3707791:+ SKI^ENSG00000157933.10 chr1:2302978:+ NO_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr1:1.34Mb]"] TP73--GDI2 1 0 1.00 0.00 ONLY_REF_SPLICE TP73^ENSG00000078900.15 chr1:3707791:+ GDI2^ENSG00000057608.17 chr10:5800705:- YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr10]"] TP73--DPP9-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TP73^ENSG00000078900.15 chr1:3707746:+ DPP9-AS1^ENSG00000205790.1 chr19:4684820:+ NO_LDAS 0.0102 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr19]"] TP53--HEG1 1 0 1.00 0.00 ONLY_REF_SPLICE TP53^ENSG00000141510.18 chr17:7687377:- HEG1^ENSG00000173706.14 chr3:125021130:- YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr3]"] TOPORS--ZADH2 1 0 1.00 0.00 ONLY_REF_SPLICE TOPORS^ENSG00000197579.8 chr9:32552434:- ZADH2^ENSG00000180011.7 chr18:75202340:- YES_LDAS 0.0102 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr9--chr18]"] TOP2B--PRPF31 1 0 1.00 0.00 INCL_NON_REF_SPLICE TOP2B^ENSG00000077097.15 chr3:25618418:- PRPF31^ENSG00000105618.14 chr19:54118318:+ NO_LDAS 0.0102 GT 1.3383 AG 1.4295 ["INTERCHROMOSOMAL[chr3--chr19]"] TOP2A--U73166.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TOP2A^ENSG00000131747.15 chr17:40413191:- U73166.1^ENSG00000230454.1 chr3:50261819:+ NO_LDAS 0.0102 GT 1.9219 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr3]"] TOP2A--CNBP 1 0 1.00 0.00 ONLY_REF_SPLICE TOP2A^ENSG00000131747.15 chr17:40399872:- CNBP^ENSG00000169714.17 chr3:129171771:- NO_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr3]"] TOP1--LARP4B 1 0 1.00 0.00 ONLY_REF_SPLICE TOP1^ENSG00000198900.7 chr20:41029455:+ LARP4B^ENSG00000107929.15 chr10:885760:- YES_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr20--chr10]"] TOMM70--LRRFIP2 1 0 1.00 0.00 ONLY_REF_SPLICE TOMM70^ENSG00000154174.8 chr3:100377705:- LRRFIP2^ENSG00000093167.18 chr3:37075116:- NO_LDAS 0.0102 GT 1.7819 AG 1.7056 ["INTRACHROMOSOMAL[chr3:63.18Mb]"] TOMM20--TMCO3 1 0 1.00 0.00 ONLY_REF_SPLICE TOMM20^ENSG00000173726.11 chr1:235113768:- TMCO3^ENSG00000150403.18 chr13:113495502:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr13]"] TOM1L2--AHCYL2 1 0 1.00 0.00 ONLY_REF_SPLICE TOM1L2^ENSG00000175662.18 chr17:17866296:- AHCYL2^ENSG00000158467.16 chr7:129400290:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5546 ["INTERCHROMOSOMAL[chr17--chr7]"] TNRC6B--KMT2E 1 0 1.00 0.00 INCL_NON_REF_SPLICE TNRC6B^ENSG00000100354.21 chr22:40266526:+ KMT2E^ENSG00000005483.21 chr7:105112852:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr7]"] TNRC6A--NOTCH2 1 0 0.33 0.00 ONLY_REF_SPLICE TNRC6A^ENSG00000090905.19 chr16:24729846:+ NOTCH2^ENSG00000134250.20 chr1:120029987:- YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr1]"] TNRC6A--NBPF10 1 0 0.33 0.00 ONLY_REF_SPLICE TNRC6A^ENSG00000090905.19 chr16:24729846:+ NBPF10^ENSG00000271425.9 chr1:146189381:- YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr1]"] TNPO3--DOCK7 1 0 1.00 0.00 ONLY_REF_SPLICE TNPO3^ENSG00000064419.13 chr7:129054651:- DOCK7^ENSG00000116641.18 chr1:62663130:- YES_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr7--chr1]"] TNPO2--INTS4 1 0 0.33 0.00 ONLY_REF_SPLICE TNPO2^ENSG00000105576.15 chr19:12711296:- INTS4^ENSG00000149262.17 chr11:77922471:- YES_LDAS 0.0034 GT 1.9899 AG 1.7968 ["INTERCHROMOSOMAL[chr19--chr11]"] TNPO1--MCTP1 1 0 1.00 0.00 ONLY_REF_SPLICE TNPO1^ENSG00000083312.18 chr5:72872720:+ MCTP1^ENSG00000175471.19 chr5:95017484:- YES_LDAS 0.0102 GT 1.6729 AG 1.2419 ["INTRACHROMOSOMAL[chr5:21.79Mb]"] TNFRSF8--MRPL23 1 0 1.00 0.00 ONLY_REF_SPLICE TNFRSF8^ENSG00000120949.15 chr1:12126236:+ MRPL23^ENSG00000214026.11 chr11:1972559:+ YES_LDAS 0.0102 GT 1.8892 AG 1.3753 ["INTERCHROMOSOMAL[chr1--chr11]"] TNFRSF17--NUP205 1 0 1.00 0.00 ONLY_REF_SPLICE TNFRSF17^ENSG00000048462.11 chr16:11965454:+ NUP205^ENSG00000155561.15 chr7:135591450:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr7]"] TNFRSF13C--RBM39 1 0 1.00 0.00 ONLY_REF_SPLICE TNFRSF13C^ENSG00000159958.7 chr22:41926101:- RBM39^ENSG00000131051.24 chr20:35725155:- YES_LDAS 0.0102 GT 1.5219 AG 1.7968 ["INTERCHROMOSOMAL[chr22--chr20]"] TNFRSF13B--CCDC144A 1 0 0.33 0.00 ONLY_REF_SPLICE TNFRSF13B^ENSG00000240505.9 chr17:16948738:- CCDC144A^ENSG00000170160.17 chr17:16761425:+ YES_LDAS 0.0034 GT 1.8062 AG 1.8892 ["INTRACHROMOSOMAL[chr17:0.15Mb]"] TNFRSF10C--ADPGK 1 0 1.00 0.00 ONLY_REF_SPLICE TNFRSF10C^ENSG00000173535.15 chr8:23111825:+ ADPGK^ENSG00000159322.17 chr15:72752892:- NO_LDAS 0.0102 GT 1.8892 AG 1.5850 ["INTERCHROMOSOMAL[chr8--chr15]"] TNFRSF10B--SHC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TNFRSF10B^ENSG00000120889.13 chr8:23021133:- SHC2^ENSG00000129946.10 chr19:419576:- NO_LDAS 0.0102 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr8--chr19]"] TNFAIP8L1--CHD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TNFAIP8L1^ENSG00000185361.9 chr19:4639625:+ CHD1^ENSG00000153922.11 chr5:98926534:- YES_LDAS 0.0102 GT 1.9899 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr5]"] TNFAIP8--MAN2A1 1 0 1.00 0.00 ONLY_REF_SPLICE TNFAIP8^ENSG00000145779.8 chr5:119268907:+ MAN2A1^ENSG00000112893.10 chr5:109767535:+ YES_LDAS 0.0102 GT 1.7232 AG 1.9656 ["INTRACHROMOSOMAL[chr5:9.40Mb]"] TMTC1--MCM8 1 0 1.00 0.00 ONLY_REF_SPLICE TMTC1^ENSG00000133687.16 chr12:29659880:- MCM8^ENSG00000125885.13 chr20:5954608:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr20]"] TMTC1--ADAM10 1 0 1.00 0.00 ONLY_REF_SPLICE TMTC1^ENSG00000133687.16 chr12:29751666:- ADAM10^ENSG00000137845.15 chr15:58717727:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr15]"] TMSB4XP6--DDX1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TMSB4XP6^ENSG00000230043.1 chr20:50840607:- DDX1^ENSG00000079785.16 chr2:15617260:+ YES_LDAS 0.0051 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr2]"] TMSB15B--PRPS1 1 0 0.50 0.00 ONLY_REF_SPLICE TMSB15B^ENSG00000269226.7 chrX:104076140:- PRPS1^ENSG00000147224.13 chrX:107645177:+ YES_LDAS 0.0051 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chrX:3.66Mb]"] TMSB15B--PRPS1 1 0 0.50 0.00 ONLY_REF_SPLICE TMSB15B^ENSG00000158427.15 chrX:103962723:+ PRPS1^ENSG00000147224.13 chrX:107645177:+ YES_LDAS 0.0051 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chrX:3.66Mb]"] TMSB15B--OS9 1 0 0.50 0.00 ONLY_REF_SPLICE TMSB15B^ENSG00000269226.7 chrX:104076140:- OS9^ENSG00000135506.16 chr12:57696275:+ YES_LDAS 0.0051 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr12]"] TMSB15B--OS9 1 0 0.50 0.00 ONLY_REF_SPLICE TMSB15B^ENSG00000158427.15 chrX:103962723:+ OS9^ENSG00000135506.16 chr12:57696275:+ YES_LDAS 0.0051 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr12]"] TMOD4--VPS72 1 0 1.00 0.00 ONLY_REF_SPLICE TMOD4^ENSG00000163157.15 chr1:151173499:- VPS72^ENSG00000163159.14 chr1:151178145:- YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:-:[20]"] TMOD4--VPS72 1 0 1.00 0.00 ONLY_REF_SPLICE TMOD4^ENSG00000163157.15 chr1:151173499:- VPS72^ENSG00000163159.14 chr1:151177031:- YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:-:[20]"] TMEM87B--KANTR 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM87B^ENSG00000153214.11 chr2:112107840:+ KANTR^ENSG00000232593.7 chrX:53166921:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chrX]"] TMEM87A--MBNL1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM87A^ENSG00000103978.16 chr15:42233213:- MBNL1^ENSG00000152601.17 chr3:152414941:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr3]"] TMEM41A--CRTC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM41A^ENSG00000163900.11 chr3:185491374:- CRTC2^ENSG00000160741.17 chr1:153955307:- YES_LDAS 0.0102 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr1]"] TMEM39A--NOS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM39A^ENSG00000176142.13 chr3:119437951:- NOS1^ENSG00000089250.19 chr12:117210392:- NO_LDAS 0.0102 GT 1.6895 AG 1.3996 ["INTERCHROMOSOMAL[chr3--chr12]"] TMEM38A--MED26 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM38A^ENSG00000072954.7 chr19:16661341:+ MED26^ENSG00000105085.11 chr19:16578409:- YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr19:0.03Mb]","LOCAL_INVERSION:+:-:[32077]"] TMEM242--NDUFB2 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM242^ENSG00000215712.11 chr6:157318782:- NDUFB2^ENSG00000090266.13 chr7:140706563:+ NO_LDAS 0.0102 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr7]"] TMEM234--HP1BP3 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM234^ENSG00000160055.20 chr1:32221131:- HP1BP3^ENSG00000127483.19 chr1:20773610:- NO_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr1:11.43Mb]"] TMEM216--ORAI1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM216^ENSG00000187049.10 chr11:61393976:+ ORAI1^ENSG00000276045.3 chr12:121641041:+ YES_LDAS 0.0102 GT 1.3710 AG 1.6729 ["INTERCHROMOSOMAL[chr11--chr12]"] TMEM200A--AC034236.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM200A^ENSG00000164484.12 chr6:130366078:+ AC034236.1^ENSG00000185641.6 chr5:116052272:- NO_LDAS 0.0102 GC 1.6729 AG 1.4295 ["INTERCHROMOSOMAL[chr6--chr5]"] TMEM18--SLC7A6 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM18^ENSG00000151353.15 chr2:677289:- SLC7A6^ENSG00000103064.15 chr16:68266593:+ YES_LDAS 0.0102 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr16]"] TMEM168--BMT2 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM168^ENSG00000146802.13 chr7:112790160:- BMT2^ENSG00000164603.12 chr7:112832675:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr7:0.03Mb]","LOCAL_REARRANGEMENT:-:[28724]"] TMEM161B-AS1--TMEM161B 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM161B-AS1^ENSG00000247828.8 chr5:88270585:+ TMEM161B^ENSG00000164180.14 chr5:88240916:- NO_LDAS 0.0102 GT 1.9086 AG 1.5656 ["INTRACHROMOSOMAL[chr5:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[585]"] TMEM161B--XRCC4 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM161B^ENSG00000164180.14 chr5:88196376:- XRCC4^ENSG00000152422.16 chr5:83203552:+ YES_LDAS 0.0102 GT 1.2729 AG 1.5219 ["INTRACHROMOSOMAL[chr5:4.84Mb]"] TMEM159--TMEM18 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM159^ENSG00000011638.11 chr16:21161278:+ TMEM18^ENSG00000151353.15 chr2:664303:- YES_LDAS 0.0102 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr2]"] TMEM138--TOP2B 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM138^ENSG00000149483.12 chr11:61367998:+ TOP2B^ENSG00000077097.15 chr3:25645455:- YES_LDAS 0.0102 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr11--chr3]"] TMEM138--EIF2S2 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM138^ENSG00000149483.12 chr11:61366216:+ EIF2S2^ENSG00000125977.7 chr20:34098633:- YES_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr20]"] TMEM138--DDB1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM138^ENSG00000149483.12 chr11:61366216:+ DDB1^ENSG00000167986.15 chr11:61314486:- NO_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr11:0.02Mb]","LOCAL_INVERSION:+:-:[19748]"] TMEM135--TRERF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM135^ENSG00000166575.17 chr11:87157406:+ TRERF1^ENSG00000124496.12 chr6:42226761:- YES_LDAS 0.0102 GT 1.4566 AG 1.7056 ["INTERCHROMOSOMAL[chr11--chr6]"] TMEM135--TM9SF3 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM135^ENSG00000166575.17 chr11:87038186:+ TM9SF3^ENSG00000077147.16 chr10:96544206:- YES_LDAS 0.0102 GT 1.7819 AG 1.4295 ["INTERCHROMOSOMAL[chr11--chr10]"] TMEM131--SS18 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM131^ENSG00000075568.17 chr2:97888052:- SS18^ENSG00000141380.14 chr18:26078160:- NO_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr18]"] TMEM129--TROAP 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM129^ENSG00000168936.11 chr4:1716705:- TROAP^ENSG00000135451.13 chr12:49323337:+ NO_LDAS 0.0102 GT 1.7232 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chr12]"] TMEM120B--TRIT1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM120B^ENSG00000188735.13 chr12:121712964:+ TRIT1^ENSG00000043514.17 chr1:39848097:- YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr1]"] TMEM120B--RNF34 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM120B^ENSG00000188735.13 chr12:121752223:+ RNF34^ENSG00000170633.16 chr12:121416159:+ YES_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTRACHROMOSOMAL[chr12:0.28Mb]"] TMEM120B--FOXN3 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM120B^ENSG00000188735.13 chr12:121752223:+ FOXN3^ENSG00000053254.16 chr14:89412490:- YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr14]"] TMEM117--ZMYM2 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM117^ENSG00000139173.10 chr12:44143624:+ ZMYM2^ENSG00000121741.17 chr13:20026612:+ YES_LDAS 0.0102 GT 1.9656 AG 1.6729 ["INTERCHROMOSOMAL[chr12--chr13]"] TMEM108--MRPS27 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM108^ENSG00000144868.14 chr3:133229351:+ MRPS27^ENSG00000113048.17 chr5:72297702:- YES_LDAS 0.0102 GT 1.9086 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr5]"] TMEM106C--PRKAR1B-AS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM106C^ENSG00000134291.12 chr12:47965349:+ PRKAR1B-AS2^ENSG00000229380.1 chr7:565325:+ NO_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr7]"] TMEM102--TOP3B 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM102^ENSG00000181284.3 chr17:7437075:+ TOP3B^ENSG00000100038.20 chr22:21958160:- NO_LDAS 0.0102 GT 1.7465 AG 1.6049 ["INTERCHROMOSOMAL[chr17--chr22]"] TMED9--RARG 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMED9^ENSG00000184840.12 chr5:177595325:+ RARG^ENSG00000172819.17 chr12:53211098:- YES_LDAS 0.0102 GT 1.3383 AG 1.8323 ["INTERCHROMOSOMAL[chr5--chr12]"] TMED9--HNRNPAB 1 0 1.00 0.00 ONLY_REF_SPLICE TMED9^ENSG00000184840.12 chr5:177593775:+ HNRNPAB^ENSG00000197451.12 chr5:178210132:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9329 ["INTRACHROMOSOMAL[chr5:0.61Mb]"] TMED5--ITGB3BP 1 0 1.00 0.00 ONLY_REF_SPLICE TMED5^ENSG00000117500.13 chr1:93180054:- ITGB3BP^ENSG00000142856.17 chr1:63454968:- YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr1:29.56Mb]"] TMED4--EIF2AK2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMED4^ENSG00000158604.15 chr7:44581089:- EIF2AK2^ENSG00000055332.19 chr2:37122660:- YES_LDAS 0.0102 GT 1.8295 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr2]"] TMCC3--AC092468.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMCC3^ENSG00000057704.13 chr12:94650353:- AC092468.1^ENSG00000241596.1 chr3:115658639:+ NO_LDAS 0.0102 GT 1.7819 AG 1.5219 ["INTERCHROMOSOMAL[chr12--chr3]"] TMBIM6--HMCES 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMBIM6^ENSG00000139644.13 chr12:49764140:+ HMCES^ENSG00000183624.14 chr3:129279710:+ YES_LDAS 0.0102 GT 1.7232 AG 1.5546 ["INTERCHROMOSOMAL[chr12--chr3]"] TM9SF4--ERGIC3 1 0 1.00 0.00 ONLY_REF_SPLICE TM9SF4^ENSG00000101337.16 chr20:32136173:+ ERGIC3^ENSG00000125991.20 chr20:35547412:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr20:3.37Mb]"] TLK2--BRCC3 1 0 1.00 0.00 ONLY_REF_SPLICE TLK2^ENSG00000146872.18 chr17:62586226:+ BRCC3^ENSG00000185515.15 chrX:155073377:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chrX]"] TLK2--ARMH3 1 0 1.00 0.00 ONLY_REF_SPLICE TLK2^ENSG00000146872.18 chr17:62536337:+ ARMH3^ENSG00000120029.13 chr10:102029745:- YES_LDAS 0.0102 GT 1.5546 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr10]"] TLK1--ENC1 1 0 1.00 0.00 ONLY_REF_SPLICE TLK1^ENSG00000198586.14 chr2:171117739:- ENC1^ENSG00000171617.15 chr5:74637701:- YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr5]"] TLK1--ANKAR 1 0 1.00 0.00 ONLY_REF_SPLICE TLK1^ENSG00000198586.14 chr2:171006147:- ANKAR^ENSG00000151687.14 chr2:189706938:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr2:18.44Mb]"] TJAP1--SFTPB 1 0 1.00 0.00 INCL_NON_REF_SPLICE TJAP1^ENSG00000137221.14 chr6:43505546:+ SFTPB^ENSG00000168878.19 chr2:85667806:- NO_LDAS 0.0102 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr6--chr2]"] TINAGL1--MTRNR2L12 1 0 1.00 0.00 INCL_NON_REF_SPLICE TINAGL1^ENSG00000142910.16 chr1:31577458:+ MTRNR2L12^ENSG00000269028.3 chr3:96617992:- NO_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr3]"] TINAG--ARGLU1 1 0 1.00 0.00 ONLY_REF_SPLICE TINAG^ENSG00000137251.16 chr6:54354636:+ ARGLU1^ENSG00000134884.15 chr13:106544160:- YES_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr13]"] TIMM23--NCOA4 1 0 0.50 0.00 ONLY_REF_SPLICE TIMM23^ENSG00000265354.4 chr10:45988847:+ NCOA4^ENSG00000266412.6 chr10:46016694:- YES_LDAS 0.0051 GT 1.7819 AG 1.5628 ["INTRACHROMOSOMAL[chr10:0.00Mb]","LOCAL_INVERSION:+:-:[1346]"] TIMM13--ATP6V0C 1 0 1.00 0.00 INCL_NON_REF_SPLICE TIMM13^ENSG00000099800.8 chr19:2426881:- ATP6V0C^ENSG00000185883.12 chr16:2519218:+ YES_LDAS 0.0102 GT 1.7968 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr16]"] TIGD7--ZDHHC20 1 0 1.00 0.00 INCL_NON_REF_SPLICE TIGD7^ENSG00000140993.11 chr16:3299273:- ZDHHC20^ENSG00000180776.16 chr13:21421164:- NO_LDAS 0.0102 GT 1.2729 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr13]"] TIAL1--CCDC14 1 0 1.00 0.00 ONLY_REF_SPLICE TIAL1^ENSG00000151923.18 chr10:119588152:- CCDC14^ENSG00000175455.16 chr3:123949132:- YES_LDAS 0.0102 GT 1.5546 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr3]"] THRAP3--ZADH2 1 0 1.00 0.00 ONLY_REF_SPLICE THRAP3^ENSG00000054118.15 chr1:36287270:+ ZADH2^ENSG00000180011.7 chr18:75202340:- YES_LDAS 0.0102 GC 1.8295 AG 1.4566 ["INTERCHROMOSOMAL[chr1--chr18]"] TGOLN2--NFATC2 1 0 1.00 0.00 ONLY_REF_SPLICE TGOLN2^ENSG00000152291.14 chr2:85324915:- NFATC2^ENSG00000101096.20 chr20:51391451:- YES_LDAS 0.0102 GT 1.9656 AG 1.5628 ["INTERCHROMOSOMAL[chr2--chr20]"] TGIF2--SNRPN 1 0 1.00 0.00 ONLY_REF_SPLICE TGIF2^ENSG00000118707.11 chr20:36573745:+ SNRPN^ENSG00000128739.23 chr15:24962114:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr15]"] TGIF2--PSMG3 1 0 1.00 0.00 ONLY_REF_SPLICE TGIF2^ENSG00000118707.11 chr20:36578966:+ PSMG3^ENSG00000157778.9 chr7:1569360:- YES_LDAS 0.0102 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr7]"] TGFBRAP1--PIP4K2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE TGFBRAP1^ENSG00000135966.13 chr2:105269596:- PIP4K2A^ENSG00000150867.14 chr10:22541936:- YES_LDAS 0.0102 GC 1.9899 AG 1.6729 ["INTERCHROMOSOMAL[chr2--chr10]"] TFDP1--KLF16 1 0 1.00 0.00 ONLY_REF_SPLICE TFDP1^ENSG00000198176.13 chr13:113585849:+ KLF16^ENSG00000129911.9 chr19:1854760:- NO_LDAS 0.0102 GT 1.7232 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chr19]"] TFDP1--CUL4A 1 0 1.00 0.00 ONLY_REF_SPLICE TFDP1^ENSG00000198176.13 chr13:113611062:+ CUL4A^ENSG00000139842.15 chr13:113218945:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9899 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.32Mb]"] TEX9--ZNF573 1 0 1.00 0.00 ONLY_REF_SPLICE TEX9^ENSG00000151575.14 chr15:56365670:+ ZNF573^ENSG00000189144.15 chr19:37740194:- YES_LDAS 0.0102 GT 1.3996 AG 1.7465 ["INTERCHROMOSOMAL[chr15--chr19]"] TEX28--PWWP2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE TEX28^ENSG00000278057.4 chrX:154295060:- PWWP2A^ENSG00000170234.13 chr5:160119109:- YES_LDAS 0.0102 GT 1.8295 AG 1.9899 ["INTERCHROMOSOMAL[chrX--chr5]"] TET3--FHIT 1 0 1.00 0.00 INCL_NON_REF_SPLICE TET3^ENSG00000187605.16 chr2:74101651:+ FHIT^ENSG00000189283.10 chr3:61042059:- NO_LDAS 0.0102 GT 1.5656 AG 1.2310 ["INTERCHROMOSOMAL[chr2--chr3]"] TET2--SRP9P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TET2^ENSG00000168769.14 chr4:105146979:+ SRP9P1^ENSG00000180581.7 chr10:91807445:- YES_LDAS 0.0102 GT 1.4295 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr10]"] TESK1--CDK11B 1 0 1.00 0.00 INCL_NON_REF_SPLICE TESK1^ENSG00000107140.16 chr9:35607609:+ CDK11B^ENSG00000248333.9 chr1:1637004:- NO_LDAS 0.0102 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chr9--chr1]"] TEPP--UBTF 1 0 1.00 0.00 INCL_NON_REF_SPLICE TEPP^ENSG00000159648.12 chr16:57986157:+ UBTF^ENSG00000108312.15 chr17:44209733:- NO_LDAS 0.0102 GT 1.4256 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr17]"] TENT5C--CDKN1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE TENT5C^ENSG00000183508.5 chr1:117626402:+ CDKN1A^ENSG00000124762.14 chr6:36685751:+ YES_LDAS 0.0102 GT 1.9086 AG 1.5656 ["INTERCHROMOSOMAL[chr1--chr6]"] TDG--MTRNR2L4 1 0 0.50 0.00 INCL_NON_REF_SPLICE TDG^ENSG00000139372.15 chr12:103983335:+ MTRNR2L4^ENSG00000232196.4 chr16:3371942:- NO_LDAS 0.0051 GT 1.5656 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr16]"] TCL6--SPCS2 1 0 0.50 0.00 ONLY_REF_SPLICE TCL6^ENSG00000187621.15 chr14:95665076:+ SPCS2^ENSG00000118363.12 chr11:74969640:+ NO_LDAS 0.0051 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr11]"] TCF7L1--TCF7 1 0 1.00 0.00 ONLY_REF_SPLICE TCF7L1^ENSG00000152284.5 chr2:85306559:+ TCF7^ENSG00000081059.20 chr5:134143592:+ YES_LDAS 0.0102 GT 1.9329 AG 0.9968 ["INTERCHROMOSOMAL[chr2--chr5]"] TCF25--XPO5 1 0 1.00 0.00 ONLY_REF_SPLICE TCF25^ENSG00000141002.20 chr16:89896083:+ XPO5^ENSG00000124571.18 chr6:43534007:- YES_LDAS 0.0102 GT 1.5656 AG 1.5058 ["INTERCHROMOSOMAL[chr16--chr6]"] TCF25--VPS45 1 0 1.00 0.00 ONLY_REF_SPLICE TCF25^ENSG00000141002.20 chr16:89887717:+ VPS45^ENSG00000136631.15 chr1:150144709:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr1]"] TCF12--VRK1 1 0 1.00 0.00 ONLY_REF_SPLICE TCF12^ENSG00000140262.18 chr15:56921098:+ VRK1^ENSG00000100749.9 chr14:96833467:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr15--chr14]"] TCF12--UBE2E3 1 0 1.00 0.00 ONLY_REF_SPLICE TCF12^ENSG00000140262.18 chr15:56921098:+ UBE2E3^ENSG00000170035.16 chr2:181057693:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr2]"] TCF12--MINDY2 1 0 1.00 0.00 ONLY_REF_SPLICE TCF12^ENSG00000140262.18 chr15:57063823:+ MINDY2^ENSG00000128923.11 chr15:58787906:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr15:1.47Mb]"] TBP--AHCTF1 1 0 0.50 0.00 ONLY_REF_SPLICE TBP^ENSG00000112592.14 chr6:170567009:+ AHCTF1^ENSG00000153207.16 chr1:246888517:- YES_LDAS 0.0051 GT 1.5656 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr1]"] TBCEL--EI24 1 0 1.00 0.00 ONLY_REF_SPLICE TBCEL^ENSG00000154114.12 chr11:121047667:+ EI24^ENSG00000149547.15 chr11:125583521:+ NO_LDAS 0.0102 GT 1.8323 AG 1.7819 ["INTRACHROMOSOMAL[chr11:4.48Mb]"] TBCE--ZFR 1 0 1.00 0.00 ONLY_REF_SPLICE TBCE^ENSG00000284770.2 chr1:235380149:+ ZFR^ENSG00000056097.16 chr5:32420103:- YES_LDAS 0.0102 GT 1.7465 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr5]"] TBCCD1--UBE2D2 1 0 1.00 0.00 ONLY_REF_SPLICE TBCCD1^ENSG00000113838.13 chr3:186570107:- UBE2D2^ENSG00000131508.16 chr5:139600372:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr5]"] TBCA--WDR41 1 0 1.00 0.00 ONLY_REF_SPLICE TBCA^ENSG00000171530.15 chr5:77776205:- WDR41^ENSG00000164253.14 chr5:77464809:- YES_LDAS 0.0102 GT 1.7232 AG 1.8892 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr5:0.07Mb]","NEIGHBORS[70555]"] TBCA--ERBIN 1 0 1.00 0.00 ONLY_REF_SPLICE TBCA^ENSG00000171530.15 chr5:77776205:- ERBIN^ENSG00000112851.15 chr5:65988635:+ YES_LDAS 0.0102 GT 1.7232 AG 1.8892 ["INTRACHROMOSOMAL[chr5:11.61Mb]"] TBC1D9B--SSU72 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D9B^ENSG00000197226.13 chr5:179888103:- SSU72^ENSG00000160075.12 chr1:1564916:- YES_LDAS 0.0102 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr5--chr1]"] TBC1D9B--PSMG3 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D9B^ENSG00000197226.13 chr5:179904702:- PSMG3^ENSG00000157778.9 chr7:1569360:- YES_LDAS 0.0102 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr7]"] TBC1D5--LINC00663 1 0 1.00 0.00 INCL_NON_REF_SPLICE TBC1D5^ENSG00000131374.14 chr3:17372063:- LINC00663^ENSG00000266904.6 chr19:19757429:- YES_LDAS 0.0102 GT 1.5219 AG 0.7219 ["INTERCHROMOSOMAL[chr3--chr19]"] TBC1D32--CARD8 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D32^ENSG00000146350.14 chr6:121090853:- CARD8^ENSG00000105483.18 chr19:48241063:- YES_LDAS 0.0102 GT 1.7819 AG 1.5546 ["INTERCHROMOSOMAL[chr6--chr19]"] TBC1D27P--TBC1D3 1 0 0.09 0.00 ONLY_REF_SPLICE TBC1D27P^ENSG00000128438.10 chr17:16927678:- TBC1D3^ENSG00000274611.3 chr17:38185154:- NO_LDAS 0.0009 GT 1.8323 AG 1.9086 ["INTRACHROMOSOMAL[chr17:21.25Mb]"] TBC1D24--PRPF19 1 0 1.00 0.00 INCL_NON_REF_SPLICE TBC1D24^ENSG00000162065.14 chr16:2485297:+ PRPF19^ENSG00000110107.9 chr11:60901336:- NO_LDAS 0.0102 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chr16--chr11]"] TATDN2--COBL 1 0 1.00 0.00 INCL_NON_REF_SPLICE TATDN2^ENSG00000157014.11 chr3:10249474:+ COBL^ENSG00000106078.19 chr7:51033983:- NO_LDAS 0.0102 GT 1.8062 AG 1.6729 ["INTERCHROMOSOMAL[chr3--chr7]"] TASOR2--FBH1 1 0 1.00 0.00 ONLY_REF_SPLICE TASOR2^ENSG00000108021.20 chr10:5731203:+ FBH1^ENSG00000134452.20 chr10:5903020:+ YES_LDAS 0.0102 GT 0.8366 AG 1.9329 ["INTRACHROMOSOMAL[chr10:0.13Mb]"] TASOR2--DDHD2 1 0 1.00 0.00 ONLY_REF_SPLICE TASOR2^ENSG00000108021.20 chr10:5685175:+ DDHD2^ENSG00000085788.14 chr8:38232987:+ YES_LDAS 0.0102 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr8]"] TARS2--RNF34 1 0 1.00 0.00 ONLY_REF_SPLICE TARS2^ENSG00000143374.17 chr1:150491662:+ RNF34^ENSG00000170633.16 chr12:121416159:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr12]"] TANGO6--NFIB 1 0 1.00 0.00 ONLY_REF_SPLICE TANGO6^ENSG00000103047.8 chr16:68930295:+ NFIB^ENSG00000147862.17 chr9:14307520:- YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr9]"] TAF8--RBL1 1 0 1.00 0.00 ONLY_REF_SPLICE TAF8^ENSG00000137413.16 chr6:42051513:+ RBL1^ENSG00000080839.12 chr20:37007559:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr20]"] TAF4B--SS18 1 0 1.00 0.00 ONLY_REF_SPLICE TAF4B^ENSG00000141384.13 chr18:26227276:+ SS18^ENSG00000141380.14 chr18:26057742:- YES_LDAS 0.0102 GT 1.8892 AG 1.5628 ["INTRACHROMOSOMAL[chr18:0.14Mb]"] TAF3--POLR1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE TAF3^ENSG00000165632.8 chr10:8009330:+ POLR1B^ENSG00000125630.16 chr2:112542222:+ NO_LDAS 0.0102 GT 1.9656 AG 1.5546 ["INTERCHROMOSOMAL[chr10--chr2]"] TAF1D--PSMA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TAF1D^ENSG00000166012.17 chr11:93737064:- PSMA1^ENSG00000129084.18 chr11:14513643:- NO_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr11:79.09Mb]"] TAF1D--CEP295 1 0 1.00 0.00 ONLY_REF_SPLICE TAF1D^ENSG00000166012.17 chr11:93736141:- CEP295^ENSG00000166004.15 chr11:93666682:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTRACHROMOSOMAL[chr11:0.00Mb]","NEIGHBORS_OVERLAP:-:+:[410]"] SYMPK--DDB2 1 0 1.00 0.00 ONLY_REF_SPLICE SYMPK^ENSG00000125755.19 chr19:45842250:- DDB2^ENSG00000134574.12 chr11:47237837:+ YES_LDAS 0.0102 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr11]"] SWI5--CEP170 1 0 1.00 0.00 ONLY_REF_SPLICE SWI5^ENSG00000175854.14 chr9:128276755:+ CEP170^ENSG00000143702.16 chr1:243225321:- NO_LDAS 0.0102 GT 1.6402 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr1]"] SWAP70--ANAPC5 1 0 1.00 0.00 ONLY_REF_SPLICE SWAP70^ENSG00000133789.15 chr11:9694286:+ ANAPC5^ENSG00000089053.13 chr12:121309863:- YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr12]"] SVIL-AS1--TAF3 1 0 1.00 0.00 ONLY_REF_SPLICE SVIL-AS1^ENSG00000224597.10 chr10:29415412:+ TAF3^ENSG00000165632.8 chr10:7963920:+ YES_LDAS 0.0102 GT 1.9219 AG 1.2310 ["INTRACHROMOSOMAL[chr10:21.39Mb]"] SVIL-AS1--AC004160.1 1 0 1.00 0.00 ONLY_REF_SPLICE SVIL-AS1^ENSG00000224597.10 chr10:29415412:+ AC004160.1^ENSG00000230333.6 chr7:11188539:+ NO_LDAS 0.0102 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr7]"] SVIL--H2AZ2 1 0 0.50 0.00 ONLY_REF_SPLICE SVIL^ENSG00000197321.15 chr10:29499116:- H2AZ2^ENSG00000105968.19 chr7:44834562:- YES_LDAS 0.0051 GT 1.4295 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr7]"] SUZ12P1--CRLF3 1 0 1.00 0.00 ONLY_REF_SPLICE SUZ12P1^ENSG00000264538.6 chr17:30743369:+ CRLF3^ENSG00000176390.12 chr17:30804108:- NO_LDAS 0.0102 GT 1.9219 AG 1.7232 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr17:0.02Mb]","NEIGHBORS_OVERLAP:+:-:[21520]"] SUPV3L1--PDS5A 1 0 1.00 0.00 ONLY_REF_SPLICE SUPV3L1^ENSG00000156502.14 chr10:69191766:+ PDS5A^ENSG00000121892.15 chr4:39825488:- NO_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr4]"] SUPT5H--PSMD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUPT5H^ENSG00000196235.14 chr19:39470465:+ PSMD3^ENSG00000108344.15 chr17:39993972:+ NO_LDAS 0.0102 GC 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr17]"] SUPT4H1--MYO19 1 0 1.00 0.00 ONLY_REF_SPLICE SUPT4H1^ENSG00000213246.7 chr17:58347188:- MYO19^ENSG00000278259.5 chr17:36515990:- YES_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr17:21.80Mb]"] SUN1--PRKAR1B 1 0 1.00 0.00 ONLY_REF_SPLICE SUN1^ENSG00000164828.18 chr7:866067:+ PRKAR1B^ENSG00000188191.15 chr7:596304:- YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.09Mb]","LOCAL_INVERSION:+:-:[88965]"] SUN1--PRKAR1B 1 0 1.00 0.00 ONLY_REF_SPLICE SUN1^ENSG00000164828.18 chr7:866067:+ PRKAR1B^ENSG00000188191.15 chr7:551470:- YES_LDAS 0.0102 GT 1.9086 AG 1.7056 ["INTRACHROMOSOMAL[chr7:0.09Mb]","LOCAL_INVERSION:+:-:[88965]"] SUMF2--CCT6A 1 0 1.00 0.00 ONLY_REF_SPLICE SUMF2^ENSG00000129103.19 chr7:56073111:+ CCT6A^ENSG00000146731.11 chr7:56060269:+ YES_LDAS 0.0102 GT 1.7819 AG 1.5219 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","LOCAL_REARRANGEMENT:+:[13]"] SULT2B1--ALKBH7 1 0 0.33 0.00 INCL_NON_REF_SPLICE SULT2B1^ENSG00000088002.12 chr19:48575997:+ ALKBH7^ENSG00000125652.8 chr19:6374509:+ NO_LDAS 0.0034 GT 1.4566 AG 1.7819 ["INTRACHROMOSOMAL[chr19:42.18Mb]"] SULT1A3--SLX1A 1 0 0.25 0.00 INCL_NON_REF_SPLICE SULT1A3^ENSG00000261052.6 chr16:30203988:+ SLX1A^ENSG00000132207.18 chr16:30196974:+ YES_LDAS 0.0025 GT 1.7968 AG 1.7465 ["INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:+:[1667]"] SUB1--ZBTB18 1 0 1.00 0.00 ONLY_REF_SPLICE SUB1^ENSG00000113387.12 chr5:32585625:+ ZBTB18^ENSG00000179456.10 chr1:244053788:+ NO_LDAS 0.0102 GT 1.5656 AG 1.8062 ["INTERCHROMOSOMAL[chr5--chr1]"] SUB1--PRKRA 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUB1^ENSG00000113387.12 chr5:32597302:+ PRKRA^ENSG00000180228.14 chr2:178432254:- NO_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr2]"] STYXL1--PNKD 1 0 1.00 0.00 ONLY_REF_SPLICE STYXL1^ENSG00000127952.17 chr7:76047812:- PNKD^ENSG00000127838.14 chr2:218339783:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr2]"] STXBP5--MIR23AHG 1 0 1.00 0.00 INCL_NON_REF_SPLICE STXBP5^ENSG00000164506.14 chr6:147334222:+ MIR23AHG^ENSG00000267519.6 chr19:13834461:- NO_LDAS 0.0102 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr19]"] STX4--HOOK1 1 0 1.00 0.00 ONLY_REF_SPLICE STX4^ENSG00000103496.15 chr16:31038647:+ HOOK1^ENSG00000134709.12 chr1:59843432:+ NO_LDAS 0.0102 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr1]"] STX18-AS1--AC092437.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE STX18-AS1^ENSG00000247708.8 chr4:4649542:+ AC092437.1^ENSG00000280310.1 chr4:4820406:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9086 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr4:0.03Mb]","NEIGHBORS[33046]"] STRN4--CRACDL 1 0 1.00 0.00 INCL_NON_REF_SPLICE STRN4^ENSG00000090372.15 chr19:46733078:- CRACDL^ENSG00000196872.12 chr2:98822925:- NO_LDAS 0.0102 GT 1.7232 AG 1.5656 ["INTERCHROMOSOMAL[chr19--chr2]"] STRN--DDX31 1 0 1.00 0.00 ONLY_REF_SPLICE STRN^ENSG00000115808.12 chr2:36966230:- DDX31^ENSG00000125485.17 chr9:132662695:- NO_LDAS 0.0102 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr9]"] STRN--AL353626.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE STRN^ENSG00000115808.12 chr2:36902739:- AL353626.2^ENSG00000276868.1 chr9:40883761:+ NO_LDAS 0.0102 GT 1.9086 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr9]"] STRN--AL353626.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE STRN^ENSG00000115808.12 chr2:36899562:- AL353626.2^ENSG00000276868.1 chr9:40883761:+ YES_LDAS 0.0102 GT 1.5656 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr9]"] STRN--AL353626.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE STRN^ENSG00000115808.12 chr2:36877891:- AL353626.2^ENSG00000276868.1 chr9:40883755:+ YES_LDAS 0.0102 GT 1.7819 AG 1.4566 ["INTERCHROMOSOMAL[chr2--chr9]"] STRBP--PIP5K1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE STRBP^ENSG00000165209.19 chr9:123132924:- PIP5K1B^ENSG00000107242.20 chr9:68917580:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr9:54.10Mb]"] STRAP--AC097450.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE STRAP^ENSG00000023734.11 chr12:15882819:+ AC097450.1^ENSG00000286371.1 chr4:147158366:+ NO_LDAS 0.0102 GT 1.9899 AG 1.4295 ["INTERCHROMOSOMAL[chr12--chr4]"] STK3--SLC25A32 1 0 1.00 0.00 ONLY_REF_SPLICE STK3^ENSG00000104375.17 chr8:98579664:- SLC25A32^ENSG00000164933.12 chr8:103407784:- YES_LDAS 0.0102 GT 1.6402 AG 1.5058 ["INTRACHROMOSOMAL[chr8:4.46Mb]"] STK24--KLF12 1 0 1.00 0.00 INCL_NON_REF_SPLICE STK24^ENSG00000102572.15 chr13:98576745:- KLF12^ENSG00000118922.17 chr13:73995053:- NO_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr13:24.45Mb]"] STIM2--LARP4B 1 0 1.00 0.00 ONLY_REF_SPLICE STIM2^ENSG00000109689.19 chr4:26861369:+ LARP4B^ENSG00000107929.15 chr10:885760:- YES_LDAS 0.0102 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr10]"] STAT5B--TFDP1 1 0 1.00 0.00 ONLY_REF_SPLICE STAT5B^ENSG00000173757.10 chr17:42276248:- TFDP1^ENSG00000198176.13 chr13:113610996:+ YES_LDAS 0.0102 GT 1.3710 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chr13]"] STARD4-AS1--TPD52 1 0 1.00 0.00 INCL_NON_REF_SPLICE STARD4-AS1^ENSG00000246859.3 chr5:111734546:+ TPD52^ENSG00000076554.15 chr8:80064593:- NO_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr8]"] STARD13--PSMB1 1 0 1.00 0.00 ONLY_REF_SPLICE STARD13^ENSG00000133121.21 chr13:33165337:- PSMB1^ENSG00000008018.9 chr6:170549113:- YES_LDAS 0.0102 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr13--chr6]"] STAM2--CACNB4 1 0 1.00 0.00 ONLY_REF_SPLICE STAM2^ENSG00000115145.10 chr2:152175603:- CACNB4^ENSG00000182389.20 chr2:151883370:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr2:0.02Mb]","NEIGHBORS[17634]"] STAM--ZHX1 1 0 1.00 0.00 ONLY_REF_SPLICE STAM^ENSG00000136738.15 chr10:17660548:+ ZHX1^ENSG00000165156.15 chr8:123256171:- YES_LDAS 0.0102 GT 1.9329 AG 1.4295 ["INTERCHROMOSOMAL[chr10--chr8]"] STAM--USP6NL 1 0 1.00 0.00 ONLY_REF_SPLICE STAM^ENSG00000136738.15 chr10:17660548:+ USP6NL^ENSG00000148429.14 chr10:11597717:- YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr10:6.03Mb]"] STAM--SNX5 1 0 1.00 0.00 ONLY_REF_SPLICE STAM^ENSG00000136738.15 chr10:17644379:+ SNX5^ENSG00000089006.17 chr20:17943195:- YES_LDAS 0.0102 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr10--chr20]"] STAG3L5P--MYO3B 1 0 1.00 0.00 INCL_NON_REF_SPLICE STAG3L5P^ENSG00000242294.6 chr7:100336191:+ MYO3B^ENSG00000071909.19 chr2:170402851:+ YES_LDAS 0.0102 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr2]"] STAG3L5P--ADAMTS7P3 1 0 1.00 0.00 INCL_NON_REF_SPLICE STAG3L5P^ENSG00000242294.6 chr7:100338894:+ ADAMTS7P3^ENSG00000261143.1 chr15:77990099:+ NO_LDAS 0.0102 GC 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr15]"] STAG3L1--GTF2I 1 0 0.20 0.00 ONLY_REF_SPLICE STAG3L1^ENSG00000205583.13 chr7:75359409:+ GTF2I^ENSG00000263001.7 chr7:74689124:+ YES_LDAS 0.002 GT 1.9899 AG 1.9329 ["INTRACHROMOSOMAL[chr7:0.60Mb]"] STAG3L1--AP4B1 1 0 0.33 0.00 ONLY_REF_SPLICE STAG3L1^ENSG00000205583.13 chr7:75366438:+ AP4B1^ENSG00000134262.13 chr1:113904793:- YES_LDAS 0.0034 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr1]"] STAG1--PARD3 1 0 1.00 0.00 ONLY_REF_SPLICE STAG1^ENSG00000118007.13 chr3:136591445:- PARD3^ENSG00000148498.16 chr10:34269899:- NO_LDAS 0.0102 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr10]"] STAG1--ADAM17 1 0 1.00 0.00 ONLY_REF_SPLICE STAG1^ENSG00000118007.13 chr3:136349158:- ADAM17^ENSG00000151694.14 chr2:9490518:- YES_LDAS 0.0102 GT 1.4716 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr2]"] ST7L--ATP5PB 1 0 1.00 0.00 ONLY_REF_SPLICE ST7L^ENSG00000007341.19 chr1:112581992:- ATP5PB^ENSG00000116459.11 chr1:111456086:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr1:1.06Mb]"] ST7--LUC7L2 1 0 1.00 0.00 ONLY_REF_SPLICE ST7^ENSG00000004866.22 chr7:116953691:+ LUC7L2^ENSG00000146963.18 chr7:139376062:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr7:22.11Mb]"] ST6GAL1--LPP 1 0 1.00 0.00 ONLY_REF_SPLICE ST6GAL1^ENSG00000073849.16 chr3:186996673:+ LPP^ENSG00000145012.13 chr3:188484592:+ YES_LDAS 0.0102 GT 1.7819 AG 1.7968 ["DEEPEST2019","TumorFusionsNAR2018","INTRACHROMOSOMAL[chr3:1.07Mb]"] ST6GAL1--FAM185BP 1 0 1.00 0.00 ONLY_REF_SPLICE ST6GAL1^ENSG00000073849.16 chr3:186996673:+ FAM185BP^ENSG00000214439.4 chr7:77098951:- YES_LDAS 0.0102 GT 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr3--chr7]"] ST3GAL3--OLA1 1 0 1.00 0.00 ONLY_REF_SPLICE ST3GAL3^ENSG00000126091.21 chr1:43736380:+ OLA1^ENSG00000138430.16 chr2:174142000:- YES_LDAS 0.0102 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr2]"] ST3GAL3--FAM156A 1 0 0.50 0.00 ONLY_REF_SPLICE ST3GAL3^ENSG00000126091.21 chr1:43736380:+ FAM156A^ENSG00000268350.7 chrX:52956346:- YES_LDAS 0.0051 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chrX]"] ST20--ARPC4 1 0 1.00 0.00 ONLY_REF_SPLICE ST20^ENSG00000180953.11 chr15:79923452:- ARPC4^ENSG00000241553.13 chr3:9797659:+ YES_LDAS 0.0102 GT 1.5656 AG 1.7232 ["INTERCHROMOSOMAL[chr15--chr3]"] ST13--ASCC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ST13^ENSG00000100380.14 chr22:40856495:- ASCC1^ENSG00000138303.18 chr10:72161674:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr10]"] SSUH2--OXTR 1 0 1.00 0.00 ONLY_REF_SPLICE SSUH2^ENSG00000125046.15 chr3:8742459:- OXTR^ENSG00000180914.11 chr3:8753224:- NO_LDAS 0.0102 GT 1.7819 AG 1.7968 ["DEEPEST2019","INTRACHROMOSOMAL[chr3:0.01Mb]","LOCAL_REARRANGEMENT:-:[5341]"] SSRP1--ZNF785 1 0 1.00 0.00 INCL_NON_REF_SPLICE SSRP1^ENSG00000149136.9 chr11:57330855:- ZNF785^ENSG00000197162.10 chr16:30581425:- NO_LDAS 0.0102 GT 1.7056 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr16]"] SSR1--EIF4A1 1 0 1.00 0.00 ONLY_REF_SPLICE SSR1^ENSG00000124783.14 chr6:7313042:- EIF4A1^ENSG00000161960.16 chr17:7575119:+ YES_LDAS 0.0102 GT 1.5058 AG 1.5058 ["INTERCHROMOSOMAL[chr6--chr17]"] SSH2--OLA1 1 0 1.00 0.00 ONLY_REF_SPLICE SSH2^ENSG00000141298.19 chr17:29848849:- OLA1^ENSG00000138430.16 chr2:174082064:- YES_LDAS 0.0102 GT 1.7465 AG 1.3996 ["INTERCHROMOSOMAL[chr17--chr2]"] SSH2--LSM12 1 0 0.50 0.00 ONLY_REF_SPLICE SSH2^ENSG00000141298.19 chr17:29929938:- LSM12^ENSG00000161654.10 chr17:44040256:- YES_LDAS 0.0051 GT 1.6402 AG 1.9086 ["INTRACHROMOSOMAL[chr17:14.10Mb]"] SSH2--COPS3 1 0 1.00 0.00 ONLY_REF_SPLICE SSH2^ENSG00000141298.19 chr17:29793894:- COPS3^ENSG00000141030.13 chr17:17271008:- YES_LDAS 0.0102 GT 1.8256 AG 1.6402 ["INTRACHROMOSOMAL[chr17:12.34Mb]"] SSBP2--FBXO30 1 0 1.00 0.00 ONLY_REF_SPLICE SSBP2^ENSG00000145687.16 chr5:81750981:- FBXO30^ENSG00000118496.5 chr6:145806421:- YES_LDAS 0.0102 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr6]"] SSBP2--ARHGEF7 1 0 1.00 0.00 ONLY_REF_SPLICE SSBP2^ENSG00000145687.16 chr5:81750981:- ARHGEF7^ENSG00000102606.18 chr13:111205289:+ YES_LDAS 0.0102 GT 1.5656 AG 1.9086 ["INTERCHROMOSOMAL[chr5--chr13]"] SS18L1--ADRM1 1 0 1.00 0.00 ONLY_REF_SPLICE SS18L1^ENSG00000184402.15 chr20:62143889:+ ADRM1^ENSG00000130706.13 chr20:62306197:+ YES_LDAS 0.0102 GT 1.6895 AG 1.5058 ["INTRACHROMOSOMAL[chr20:0.12Mb]"] SS18--TAF4B 1 0 1.00 0.00 ONLY_REF_SPLICE SS18^ENSG00000141380.14 chr18:26078076:- TAF4B^ENSG00000141384.13 chr18:26292246:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9899 ["ChimerSeq","INTRACHROMOSOMAL[chr18:0.14Mb]"] SS18--SETBP1 1 0 1.00 0.00 ONLY_REF_SPLICE SS18^ENSG00000141380.14 chr18:26090501:- SETBP1^ENSG00000152217.20 chr18:44701175:+ NO_LDAS 0.0102 GT 1.9656 AG 1.9219 ["INTRACHROMOSOMAL[chr18:18.59Mb]"] SS18--SAMD10 1 0 1.00 0.00 ONLY_REF_SPLICE SS18^ENSG00000141380.14 chr18:26090501:- SAMD10^ENSG00000130590.14 chr20:63977406:- YES_LDAS 0.0102 GT 1.9656 AG 1.6729 ["INTERCHROMOSOMAL[chr18--chr20]"] SS18--MSH3 1 0 1.00 0.00 ONLY_REF_SPLICE SS18^ENSG00000141380.14 chr18:26087501:- MSH3^ENSG00000113318.11 chr5:80725453:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr5]"] SS18--CEP192 1 0 1.00 0.00 ONLY_REF_SPLICE SS18^ENSG00000141380.14 chr18:26032399:- CEP192^ENSG00000101639.18 chr18:13067831:+ YES_LDAS 0.0102 GT 1.9329 AG 1.4716 ["INTRACHROMOSOMAL[chr18:12.89Mb]"] SRSF5--ZFAS1 1 0 1.00 0.00 ONLY_REF_SPLICE SRSF5^ENSG00000100650.16 chr14:69769251:+ ZFAS1^ENSG00000177410.13 chr20:49280903:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chr20]"] SRSF4--ZNF684 1 0 1.00 0.00 INCL_NON_REF_SPLICE SRSF4^ENSG00000116350.17 chr1:29149099:- ZNF684^ENSG00000117010.17 chr1:40541654:+ NO_LDAS 0.0102 GC 1.7819 AG 1.5058 ["INTRACHROMOSOMAL[chr1:11.35Mb]"] SRSF4--NUCB1 1 0 1.00 0.00 ONLY_REF_SPLICE SRSF4^ENSG00000116350.17 chr1:29181646:- NUCB1^ENSG00000104805.16 chr19:48921154:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr19]"] SRSF10--PIM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SRSF10^ENSG00000188529.15 chr1:23980254:- PIM2^ENSG00000102096.9 chrX:48918645:- NO_LDAS 0.0102 GT 1.6729 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chrX]"] SRSF1--TNPO1 1 0 1.00 0.00 ONLY_REF_SPLICE SRSF1^ENSG00000136450.13 chr17:58004923:- TNPO1^ENSG00000083312.18 chr5:72896458:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr5]"] SRPK3--RPS3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SRPK3^ENSG00000184343.11 chrX:153781557:+ RPS3^ENSG00000149273.15 chr11:75400778:+ NO_LDAS 0.0102 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chrX--chr11]"] SRPK2--TRIM24 1 0 1.00 0.00 ONLY_REF_SPLICE SRPK2^ENSG00000135250.17 chr7:105268806:- TRIM24^ENSG00000122779.18 chr7:138504290:+ YES_LDAS 0.0102 GT 1.9899 AG 1.7968 ["INTRACHROMOSOMAL[chr7:33.06Mb]"] SRPK1--CYB5D2 1 0 1.00 0.00 ONLY_REF_SPLICE SRPK1^ENSG00000096063.16 chr6:35920468:- CYB5D2^ENSG00000167740.10 chr17:4149891:+ YES_LDAS 0.0102 GT 1.4566 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr17]"] SRPK1--CRYZL1 1 0 1.00 0.00 ONLY_REF_SPLICE SRPK1^ENSG00000096063.16 chr6:35886724:- CRYZL1^ENSG00000205758.12 chr21:33591211:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr21]"] SRM--PSME3 1 0 1.00 0.00 ONLY_REF_SPLICE SRM^ENSG00000116649.10 chr1:11058710:- PSME3^ENSG00000131467.11 chr17:42838731:+ YES_LDAS 0.0102 GT 1.5656 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr17]"] SRI--SLC66A1 1 0 1.00 0.00 ONLY_REF_SPLICE SRI^ENSG00000075142.14 chr7:88210882:- SLC66A1^ENSG00000040487.13 chr1:19328572:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr1]"] SRF--AC092299.1 1 0 0.17 0.00 INCL_NON_REF_SPLICE SRF^ENSG00000112658.8 chr6:43172023:+ AC092299.1^ENSG00000282416.1 chr19:197643:- YES_LDAS 0.0017 GC 1.4295 AG 1.5546 ["INTERCHROMOSOMAL[chr6--chr19]"] SREK1--VMP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SREK1^ENSG00000153914.16 chr5:66153596:+ VMP1^ENSG00000062716.13 chr17:59842082:+ NO_LDAS 0.0102 GT 1.9656 AG 1.5219 ["INTERCHROMOSOMAL[chr5--chr17]"] SREK1--PIP5K1B 1 0 1.00 0.00 ONLY_REF_SPLICE SREK1^ENSG00000153914.16 chr5:66144537:+ PIP5K1B^ENSG00000107242.20 chr9:68876677:+ NO_LDAS 0.0102 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr5--chr9]"] SRC--TM9SF4 1 0 1.00 0.00 ONLY_REF_SPLICE SRC^ENSG00000197122.12 chr20:37365277:+ TM9SF4^ENSG00000101337.16 chr20:32133013:+ NO_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr20:5.18Mb]"] SRC--DCTD 1 0 1.00 0.00 ONLY_REF_SPLICE SRC^ENSG00000197122.12 chr20:37346255:+ DCTD^ENSG00000129187.15 chr4:182915575:- YES_LDAS 0.0102 GT 1.2310 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr4]"] SQSTM1--ZBTB38 1 0 1.00 0.00 INCL_NON_REF_SPLICE SQSTM1^ENSG00000161011.20 chr5:179836786:+ ZBTB38^ENSG00000177311.11 chr3:141369921:+ YES_LDAS 0.0102 GT 1.5628 AG 1.8062 ["INTERCHROMOSOMAL[chr5--chr3]"] SQSTM1--NSD1 1 0 1.00 0.00 ONLY_REF_SPLICE SQSTM1^ENSG00000161011.20 chr5:179821141:+ NSD1^ENSG00000165671.21 chr5:177135087:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9086 ["INTRACHROMOSOMAL[chr5:2.51Mb]"] SPPL3--TMX2 1 0 0.50 0.00 ONLY_REF_SPLICE SPPL3^ENSG00000157837.16 chr12:120903845:- TMX2^ENSG00000213593.10 chr11:57737608:+ YES_LDAS 0.0051 GT 1.9656 AG 1.7056 ["INTERCHROMOSOMAL[chr12--chr11]"] SPPL3--GNPTAB 1 0 1.00 0.00 ONLY_REF_SPLICE SPPL3^ENSG00000157837.16 chr12:120903845:- GNPTAB^ENSG00000111670.16 chr12:101796762:- YES_LDAS 0.0102 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr12:18.93Mb]"] SPIN3--AMMECR1 1 0 1.00 0.00 ONLY_REF_SPLICE SPIN3^ENSG00000204271.13 chrX:56994723:- AMMECR1^ENSG00000101935.11 chrX:110202536:- YES_LDAS 0.0102 GT 1.9899 AG 1.7968 ["INTRACHROMOSOMAL[chrX:53.20Mb]"] SPIDR--UMPS 1 0 1.00 0.00 ONLY_REF_SPLICE SPIDR^ENSG00000164808.17 chr8:47294030:+ UMPS^ENSG00000114491.14 chr3:124735093:+ NO_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr3]"] SPIDR--UBE2V2 1 0 1.00 0.00 ONLY_REF_SPLICE SPIDR^ENSG00000164808.17 chr8:47294030:+ UBE2V2^ENSG00000169139.12 chr8:48043033:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr8:0.27Mb]"] SPG7--RAB3GAP2 1 0 1.00 0.00 ONLY_REF_SPLICE SPG7^ENSG00000197912.16 chr16:89513037:+ RAB3GAP2^ENSG00000118873.16 chr1:220196398:- NO_LDAS 0.0102 GT 1.7056 AG 1.8295 ["INTERCHROMOSOMAL[chr16--chr1]"] SPATS2--SP1 1 0 1.00 0.00 ONLY_REF_SPLICE SPATS2^ENSG00000123352.18 chr12:49489573:+ SP1^ENSG00000185591.10 chr12:53382110:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr12:3.85Mb]"] SPATS2--PAK1 1 0 1.00 0.00 ONLY_REF_SPLICE SPATS2^ENSG00000123352.18 chr12:49490731:+ PAK1^ENSG00000149269.10 chr11:77359017:- YES_LDAS 0.0102 GT 1.3383 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr11]"] SPATS2--LRRK2 1 0 1.00 0.00 ONLY_REF_SPLICE SPATS2^ENSG00000123352.18 chr12:49461037:+ LRRK2^ENSG00000188906.17 chr12:40346753:+ NO_LDAS 0.0102 GT 1.4566 AG 1.8256 ["INTRACHROMOSOMAL[chr12:9.00Mb]"] SPAG9--LRRC37A9P 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPAG9^ENSG00000008294.21 chr17:50998474:- LRRC37A9P^ENSG00000271013.1 chr17:35916523:- NO_LDAS 0.0102 GT 1.9656 AG 1.7968 ["INTRACHROMOSOMAL[chr17:15.04Mb]"] SPAG7--CAMTA2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPAG7^ENSG00000091640.8 chr17:4967720:- CAMTA2^ENSG00000108509.21 chr17:4968232:- YES_LDAS 0.0102 GT 1.5058 AG 1.8062 ["YOSHIHARA_TCGA","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","CCLE_StarF2019","INTRACHROMOSOMAL[chr17:0.00Mb]","LOCAL_REARRANGEMENT:-:[175]"] SPAG5--CHFR 1 0 1.00 0.00 ONLY_REF_SPLICE SPAG5^ENSG00000076382.17 chr17:28583853:- CHFR^ENSG00000072609.18 chr12:132841596:- YES_LDAS 0.0102 GT 1.9219 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr12]"] SP140--NIT1 1 0 1.00 0.00 ONLY_REF_SPLICE SP140^ENSG00000079263.19 chr2:230310039:+ NIT1^ENSG00000158793.14 chr1:161119134:+ YES_LDAS 0.0102 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr1]"] SP1--CYRIB 1 0 1.00 0.00 ONLY_REF_SPLICE SP1^ENSG00000185591.10 chr12:53383622:+ CYRIB^ENSG00000153310.19 chr8:129862334:- YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr8]"] SOX5--PRH1 1 0 1.00 0.00 ONLY_REF_SPLICE SOX5^ENSG00000134532.19 chr12:24213343:- PRH1^ENSG00000231887.7 chr12:10973721:- YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr12:12.36Mb]"] SOX5--IKBKG 1 0 0.50 0.00 INCL_NON_REF_SPLICE SOX5^ENSG00000134532.19 chr12:23575733:- IKBKG^ENSG00000269335.6 chrX:154563990:+ YES_LDAS 0.0051 GT 1.8295 AG 1.5546 ["INTERCHROMOSOMAL[chr12--chrX]"] SOX5--AMN1 1 0 1.00 0.00 ONLY_REF_SPLICE SOX5^ENSG00000134532.19 chr12:24213343:- AMN1^ENSG00000151743.11 chr12:31689118:- NO_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr12:7.11Mb]"] SNX5--AP1G1 1 0 1.00 0.00 ONLY_REF_SPLICE SNX5^ENSG00000089006.17 chr20:17955365:- AP1G1^ENSG00000166747.13 chr16:71789482:- YES_LDAS 0.0102 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr20--chr16]"] SNX2--PCGF5 1 0 1.00 0.00 ONLY_REF_SPLICE SNX2^ENSG00000205302.7 chr5:122775211:+ PCGF5^ENSG00000180628.15 chr10:91222689:+ YES_LDAS 0.0102 GT 1.9219 AG 1.7056 ["INTERCHROMOSOMAL[chr5--chr10]"] SNX12--ZNF286A 1 0 0.50 0.00 ONLY_REF_SPLICE SNX12^ENSG00000147164.12 chrX:71061028:- ZNF286A^ENSG00000187607.16 chr17:15716059:+ YES_LDAS 0.0051 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr17]"] SNX1--SHARPIN 1 0 1.00 0.00 ONLY_REF_SPLICE SNX1^ENSG00000028528.15 chr15:64138097:+ SHARPIN^ENSG00000179526.17 chr8:144103225:- YES_LDAS 0.0102 GT 1.9329 AG 1.5219 ["INTERCHROMOSOMAL[chr15--chr8]"] SNURFL--TUBG1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SNURFL^ENSG00000173954.8 chrX:139362091:+ TUBG1^ENSG00000131462.9 chr17:42614260:+ NO_LDAS 0.0051 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chrX--chr17]"] SNU13--SSBP1 1 0 1.00 0.00 ONLY_REF_SPLICE SNU13^ENSG00000100138.15 chr22:41680244:- SSBP1^ENSG00000106028.11 chr7:141743561:+ YES_LDAS 0.0102 GT 1.7056 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr7]"] SNRPF--UBE2N 1 0 1.00 0.00 ONLY_REF_SPLICE SNRPF^ENSG00000139343.10 chr12:95859076:+ UBE2N^ENSG00000177889.10 chr12:93411299:- YES_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr12:2.42Mb]"] SNRPCP9--SNRPCP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNRPCP9^ENSG00000231812.1 chr7:97885942:+ SNRPCP2^ENSG00000251235.3 chr5:76377021:+ NO_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr5]"] SNRPA1--RALGAPA1 1 0 0.50 0.00 ONLY_REF_SPLICE SNRPA1^ENSG00000131876.17 chr15:101286908:- RALGAPA1^ENSG00000174373.17 chr14:35770999:- NO_LDAS 0.0051 GT 1.4256 AG 1.4295 ["INTERCHROMOSOMAL[chr15--chr14]"] SNRPA1--FAN1 1 0 1.00 0.00 ONLY_REF_SPLICE SNRPA1^ENSG00000131876.17 chr15:101291962:- FAN1^ENSG00000198690.10 chr15:30922235:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTRACHROMOSOMAL[chr15:70.34Mb]"] SNRNP70--CLTB 1 0 0.50 0.00 INCL_NON_REF_SPLICE SNRNP70^ENSG00000104852.15 chr19:49107712:+ CLTB^ENSG00000175416.16 chr5:176416386:- NO_LDAS 0.0051 GT 1.9329 AG 1.5329 ["INTERCHROMOSOMAL[chr19--chr5]"] SNORD13--INTS11 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNORD13^ENSG00000239039.1 chr8:33513636:+ INTS11^ENSG00000127054.21 chr1:1315618:- YES_LDAS 0.0102 GT 1.8323 AG 1.8062 ["INTERCHROMOSOMAL[chr8--chr1]"] SNHG8--WASHC2A 1 0 0.50 0.00 ONLY_REF_SPLICE SNHG8^ENSG00000269893.8 chr4:118279137:+ WASHC2A^ENSG00000099290.17 chr10:50110101:+ YES_LDAS 0.0051 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr10]"] SNHG8--NSD1 1 0 1.00 0.00 ONLY_REF_SPLICE SNHG8^ENSG00000269893.8 chr4:118279137:+ NSD1^ENSG00000165671.21 chr5:177135087:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr5]"] SNHG5--TBCE 1 0 1.00 0.00 ONLY_REF_SPLICE SNHG5^ENSG00000203875.13 chr6:85677954:- TBCE^ENSG00000284770.2 chr1:235380019:+ YES_LDAS 0.0102 GT 1.9086 AG 1.7968 ["INTERCHROMOSOMAL[chr6--chr1]"] SNHG29--XRCC1 1 0 1.00 0.00 ONLY_REF_SPLICE SNHG29^ENSG00000175061.18 chr17:16441130:+ XRCC1^ENSG00000073050.12 chr19:43546977:- YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr19]"] SNHG29--MAPK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNHG29^ENSG00000175061.18 chr17:16439414:+ MAPK1^ENSG00000100030.15 chr22:21805945:- YES_LDAS 0.0102 GT 1.8256 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chr22]"] SNHG29--KATNAL1 1 0 1.00 0.00 ONLY_REF_SPLICE SNHG29^ENSG00000175061.18 chr17:16439703:+ KATNAL1^ENSG00000102781.14 chr13:30227546:- YES_LDAS 0.0102 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr13]"] SNHG29--JMJD1C 1 0 1.00 0.00 ONLY_REF_SPLICE SNHG29^ENSG00000175061.18 chr17:16439414:+ JMJD1C^ENSG00000171988.19 chr10:63380482:- YES_LDAS 0.0102 GT 1.8256 AG 1.5058 ["INTERCHROMOSOMAL[chr17--chr10]"] SNHG19--NPIPB11 1 0 0.17 0.00 INCL_NON_REF_SPLICE SNHG19^ENSG00000260260.1 chr16:2154860:- NPIPB11^ENSG00000254206.5 chr16:29495607:- NO_LDAS 0.0017 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr16:27.23Mb]"] SNHG19--NPIPB11 1 0 0.17 0.00 INCL_NON_REF_SPLICE SNHG19^ENSG00000260260.1 chr16:2154860:- NPIPB11^ENSG00000254206.5 chr16:29394076:- NO_LDAS 0.0017 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr16:27.23Mb]"] SNAPC5--ZWILCH 1 0 1.00 0.00 ONLY_REF_SPLICE SNAPC5^ENSG00000174446.13 chr15:66497642:- ZWILCH^ENSG00000174442.12 chr15:66532247:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr15:0.01Mb]","LOCAL_INVERSION:-:+:[7179]"] SNAP23--MFAP1 1 0 1.00 0.00 ONLY_REF_SPLICE SNAP23^ENSG00000092531.10 chr15:42495713:+ MFAP1^ENSG00000140259.7 chr15:43817448:- YES_LDAS 0.0102 GT 1.5058 AG 1.8256 ["INTRACHROMOSOMAL[chr15:1.26Mb]"] SMS--MOSPD2 1 0 1.00 0.00 ONLY_REF_SPLICE SMS^ENSG00000102172.16 chrX:21940873:+ MOSPD2^ENSG00000130150.12 chrX:14892723:+ YES_LDAS 0.0102 GT 1.9086 AG 1.6402 ["INTRACHROMOSOMAL[chrX:7.02Mb]"] SMIM14--N4BP2L2 1 0 1.00 0.00 ONLY_REF_SPLICE SMIM14^ENSG00000163683.12 chr4:39572415:- N4BP2L2^ENSG00000244754.9 chr13:32521449:- YES_LDAS 0.0102 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr4--chr13]"] SMG6--ZNF18 1 0 1.00 0.00 ONLY_REF_SPLICE SMG6^ENSG00000070366.14 chr17:2172658:- ZNF18^ENSG00000154957.14 chr17:11984197:- YES_LDAS 0.0102 GT 1.8295 AG 1.6895 ["INTRACHROMOSOMAL[chr17:9.67Mb]"] SMG1P6--NPIPB12 1 0 0.33 0.00 INCL_NON_REF_SPLICE SMG1P6^ENSG00000254634.4 chr16:29425840:- NPIPB12^ENSG00000169203.16 chr16:29505872:- YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr16:0.04Mb]","LOCAL_REARRANGEMENT:-:[36616]"] SMDT1--CDPF1 1 0 1.00 0.00 ONLY_REF_SPLICE SMDT1^ENSG00000183172.9 chr22:42079954:+ CDPF1^ENSG00000205643.11 chr22:46248284:- YES_LDAS 0.0102 GT 1.7819 AG 1.9899 ["INTRACHROMOSOMAL[chr22:4.16Mb]"] SMC1A--HSD17B10 1 0 1.00 0.00 ONLY_REF_SPLICE SMC1A^ENSG00000072501.19 chrX:53405012:- HSD17B10^ENSG00000072506.13 chrX:53432411:- YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.01Mb]","LOCAL_REARRANGEMENT:-:[8530]"] SMAD5--CNOT6 1 0 1.00 0.00 ONLY_REF_SPLICE SMAD5^ENSG00000113658.18 chr5:136132962:+ CNOT6^ENSG00000113300.13 chr5:180529275:+ YES_LDAS 0.0102 GT 1.8323 AG 1.7465 ["INTRACHROMOSOMAL[chr5:44.31Mb]"] SLX4IP--NIPA2 1 0 1.00 0.00 ONLY_REF_SPLICE SLX4IP^ENSG00000149346.15 chr20:10458231:+ NIPA2^ENSG00000140157.16 chr15:22851639:+ NO_LDAS 0.0102 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr15]"] SLTM--PLCL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLTM^ENSG00000137776.17 chr15:58912559:- PLCL1^ENSG00000115896.16 chr2:198146823:+ NO_LDAS 0.0102 GT 1.7968 AG 1.5546 ["INTERCHROMOSOMAL[chr15--chr2]"] SLTM--LINC02334 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLTM^ENSG00000137776.17 chr15:58901260:- LINC02334^ENSG00000274317.2 chr13:38047085:+ NO_LDAS 0.0102 GT 1.1589 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr13]"] SLIRP--SMIM14 1 0 1.00 0.00 ONLY_REF_SPLICE SLIRP^ENSG00000119705.10 chr14:77715879:+ SMIM14^ENSG00000163683.12 chr4:39572463:- YES_LDAS 0.0102 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr4]"] SLFN13--HP1BP3 1 0 1.00 0.00 ONLY_REF_SPLICE SLFN13^ENSG00000154760.14 chr17:35448273:- HP1BP3^ENSG00000127483.19 chr1:20773610:- NO_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr1]"] SLCO3A1--PPP1CC 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLCO3A1^ENSG00000176463.14 chr15:92165572:+ PPP1CC^ENSG00000186298.12 chr12:110724764:- NO_LDAS 0.0102 GT 1.5656 AG 1.5546 ["INTERCHROMOSOMAL[chr15--chr12]"] SLC7A6OS--PSME3IP1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC7A6OS^ENSG00000103061.13 chr16:68310335:- PSME3IP1^ENSG00000172775.17 chr16:57173869:- YES_LDAS 0.0102 GT 1.9329 AG 1.5546 ["INTRACHROMOSOMAL[chr16:11.10Mb]"] SLC7A6--LINC01226 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC7A6^ENSG00000103064.15 chr16:68275225:+ LINC01226^ENSG00000284543.1 chr1:31526387:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr1]"] SLC7A5--CEP131 1 0 0.33 0.00 INCL_NON_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868982:- CEP131^ENSG00000141577.14 chr17:81220030:- YES_LDAS 0.0034 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr16--chr17]"] SLC7A5--ASPSCR1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87851724:- ASPSCR1^ENSG00000169696.16 chr17:82009037:+ YES_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr17]"] SLC7A14-AS1--PDPK1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SLC7A14-AS1^ENSG00000285051.2 chr3:170860047:+ PDPK1^ENSG00000140992.19 chr16:2557703:+ YES_LDAS 0.0051 GC 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr16]"] SLC7A1--SAXO1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC7A1^ENSG00000139514.13 chr13:29517573:- SAXO1^ENSG00000155875.15 chr9:18862419:- NO_LDAS 0.0102 GT 1.8323 AG 1.5628 ["INTERCHROMOSOMAL[chr13--chr9]"] SLC6A6--DPP10 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC6A6^ENSG00000131389.17 chr3:14485054:+ DPP10^ENSG00000175497.17 chr2:115746101:+ NO_LDAS 0.0102 AT 1.8892 AC 1.3710 ["INTERCHROMOSOMAL[chr3--chr2]"] SLC6A4--NCOR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC6A4^ENSG00000108576.10 chr17:30198195:- NCOR1^ENSG00000141027.21 chr17:16101263:- NO_LDAS 0.0102 GT 1.4566 AG 1.5058 ["INTRACHROMOSOMAL[chr17:13.98Mb]"] SLC50A1--PHRF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC50A1^ENSG00000169241.19 chr1:155138371:+ PHRF1^ENSG00000070047.13 chr11:601578:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr11]"] SLC4A2--KIAA0895L 1 0 1.00 0.00 ONLY_REF_SPLICE SLC4A2^ENSG00000164889.15 chr7:151064966:+ KIAA0895L^ENSG00000196123.13 chr16:67178504:- YES_LDAS 0.0102 GT 1.6402 AG 1.7232 ["INTERCHROMOSOMAL[chr7--chr16]"] SLC44A2--ATG4D 1 0 1.00 0.00 ONLY_REF_SPLICE SLC44A2^ENSG00000129353.15 chr19:10637929:+ ATG4D^ENSG00000130734.10 chr19:10552045:+ YES_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr19:0.05Mb]","LOCAL_REARRANGEMENT:+:[49039]"] SLC44A1--UBE2J1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC44A1^ENSG00000070214.16 chr9:105244904:+ UBE2J1^ENSG00000198833.7 chr6:89343756:- YES_LDAS 0.0102 GT 1.6402 AG 1.8323 ["INTERCHROMOSOMAL[chr9--chr6]"] SLC44A1--RAD23B 1 0 1.00 0.00 ONLY_REF_SPLICE SLC44A1^ENSG00000070214.16 chr9:105299309:+ RAD23B^ENSG00000119318.13 chr9:107318752:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr9:1.84Mb]"] SLC43A2--AHSA2P 1 0 1.00 0.00 ONLY_REF_SPLICE SLC43A2^ENSG00000167703.15 chr17:1613195:- AHSA2P^ENSG00000173209.23 chr2:61178981:+ YES_LDAS 0.0102 GT 1.5850 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr2]"] SLC38A1--AC122697.1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC38A1^ENSG00000111371.16 chr12:46229153:- AC122697.1^ENSG00000286953.1 chr5:97803936:- NO_LDAS 0.0102 GT 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr5]"] SLC37A4--AP001117.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC37A4^ENSG00000137700.18 chr11:119027727:- AP001117.1^ENSG00000234730.1 chr21:21615331:+ NO_LDAS 0.0102 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr11--chr21]"] SLC37A1--PIAS1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC37A1^ENSG00000160190.14 chr21:42525857:+ PIAS1^ENSG00000033800.14 chr15:68086306:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr15]"] SLC35E2B--FIRRE 1 0 1.00 0.00 ONLY_REF_SPLICE SLC35E2B^ENSG00000189339.12 chr1:1668327:- FIRRE^ENSG00000213468.7 chrX:131794466:- YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chrX]"] SLC35E2A--TROAP 1 0 0.50 0.00 ONLY_REF_SPLICE SLC35E2A^ENSG00000215790.8 chr1:1734690:- TROAP^ENSG00000135451.13 chr12:49326668:+ YES_LDAS 0.0051 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr12]"] SLC35E2A--KHSRP 1 0 0.50 0.00 ONLY_REF_SPLICE SLC35E2A^ENSG00000215790.8 chr1:1738321:- KHSRP^ENSG00000088247.18 chr19:6418876:- YES_LDAS 0.0051 GT 1.7968 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr19]"] SLC30A9--RAD54L 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC30A9^ENSG00000014824.14 chr4:42049471:+ RAD54L^ENSG00000085999.13 chr1:46259964:+ YES_LDAS 0.0102 GT 1.7465 AG 1.5656 ["INTERCHROMOSOMAL[chr4--chr1]"] SLC2A1--CENPV 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC2A1^ENSG00000117394.24 chr1:42929593:- CENPV^ENSG00000166582.10 chr17:16344633:- NO_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr17]"] SLC27A2--BMP2K 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC27A2^ENSG00000140284.11 chr15:50202526:+ BMP2K^ENSG00000138756.19 chr4:78870783:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr4]"] SLC25A45--XPOT 1 0 1.00 0.00 ONLY_REF_SPLICE SLC25A45^ENSG00000162241.12 chr11:65381915:- XPOT^ENSG00000184575.12 chr12:64433414:+ NO_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr12]"] SLC25A42--PRKACA 1 0 1.00 0.00 ONLY_REF_SPLICE SLC25A42^ENSG00000181035.14 chr19:19096205:+ PRKACA^ENSG00000072062.15 chr19:14107409:- YES_LDAS 0.0102 GC 1.9329 AG 1.7819 ["INTRACHROMOSOMAL[chr19:4.95Mb]"] SLC25A33--RABL6 1 0 1.00 0.00 ONLY_REF_SPLICE SLC25A33^ENSG00000171612.7 chr1:9539747:+ RABL6^ENSG00000196642.19 chr9:136823525:+ YES_LDAS 0.0102 GT 1.5058 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr9]"] SLC25A32--CEP152 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC25A32^ENSG00000164933.12 chr8:103402681:- CEP152^ENSG00000103995.14 chr15:48741625:- NO_LDAS 0.0102 GT 1.5546 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr15]"] SLC25A25-AS1--RCN1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC25A25-AS1^ENSG00000234771.3 chr9:128115074:- RCN1^ENSG00000049449.10 chr11:32097144:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr9--chr11]"] SLC25A10--DENND4C 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC25A10^ENSG00000183048.12 chr17:81717879:+ DENND4C^ENSG00000137145.21 chr9:19290755:+ NO_LDAS 0.0102 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr9]"] SLC20A2--KAT6A 1 0 1.00 0.00 ONLY_REF_SPLICE SLC20A2^ENSG00000168575.10 chr8:42541538:- KAT6A^ENSG00000083168.11 chr8:41987563:- YES_LDAS 0.0102 GT 1.5219 AG 1.9656 ["INTRACHROMOSOMAL[chr8:0.36Mb]"] SLC19A2--XPR1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC19A2^ENSG00000117479.15 chr1:169485563:- XPR1^ENSG00000143324.14 chr1:180682360:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr1:11.15Mb]"] SLC12A2--ERGIC2 1 0 1.00 0.00 ONLY_REF_SPLICE SLC12A2^ENSG00000064651.14 chr5:128084710:+ ERGIC2^ENSG00000087502.18 chr12:29341218:- NO_LDAS 0.0102 GT 1.7056 AG 1.7968 ["INTERCHROMOSOMAL[chr5--chr12]"] SKP1--U2AF1 1 0 0.50 0.00 ONLY_REF_SPLICE SKP1^ENSG00000113558.19 chr5:134173926:- U2AF1^ENSG00000160201.12 chr21:43094788:- YES_LDAS 0.0051 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr21]"] SIRT3--MPHOSPH8 1 0 1.00 0.00 ONLY_REF_SPLICE SIRT3^ENSG00000142082.15 chr11:236194:- MPHOSPH8^ENSG00000196199.14 chr13:19671206:+ YES_LDAS 0.0102 GT 1.6729 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr13]"] SIRT2--DDX27 1 0 1.00 0.00 ONLY_REF_SPLICE SIRT2^ENSG00000068903.20 chr19:38883627:- DDX27^ENSG00000124228.15 chr20:49233306:+ NO_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr20]"] SIRT1--ABI1 1 0 1.00 0.00 ONLY_REF_SPLICE SIRT1^ENSG00000096717.12 chr10:67891554:+ ABI1^ENSG00000136754.18 chr10:26823305:- YES_LDAS 0.0102 GT 1.9086 AG 1.7465 ["INTRACHROMOSOMAL[chr10:41.02Mb]"] SIPA1L1--UHRF2 1 0 1.00 0.00 ONLY_REF_SPLICE SIPA1L1^ENSG00000197555.9 chr14:71321181:+ UHRF2^ENSG00000147854.17 chr9:6420912:+ YES_LDAS 0.0102 GT 1.3996 AG 1.5656 ["INTERCHROMOSOMAL[chr14--chr9]"] SIPA1--TMEM30B 1 0 1.00 0.00 INCL_NON_REF_SPLICE SIPA1^ENSG00000213445.10 chr11:65642277:+ TMEM30B^ENSG00000182107.7 chr14:61281548:- NO_LDAS 0.0102 GT 1.9219 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr14]"] SINHCAF--DDB2 1 0 1.00 0.00 ONLY_REF_SPLICE SINHCAF^ENSG00000139146.14 chr12:31326024:- DDB2^ENSG00000134574.12 chr11:47237837:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr11]"] SINHCAF--ARNTL2 1 0 1.00 0.00 ONLY_REF_SPLICE SINHCAF^ENSG00000139146.14 chr12:31326024:- ARNTL2^ENSG00000029153.14 chr12:27368262:+ YES_LDAS 0.0102 GT 1.8323 AG 1.5656 ["INTRACHROMOSOMAL[chr12:3.86Mb]"] SIK3--PAFAH1B2 1 0 1.00 0.00 ONLY_REF_SPLICE SIK3^ENSG00000160584.16 chr11:117098143:- PAFAH1B2^ENSG00000168092.14 chr11:117159934:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9086 ["INTRACHROMOSOMAL[chr11:0.05Mb]","LOCAL_INVERSION:-:+:[45847]"] SIK3--LPXN 1 0 1.00 0.00 ONLY_REF_SPLICE SIK3^ENSG00000160584.16 chr11:116896253:- LPXN^ENSG00000110031.13 chr11:58528191:- YES_LDAS 0.0102 GT 1.8295 AG 1.9329 ["INTRACHROMOSOMAL[chr11:58.27Mb]"] SIK2--PSMB8 1 0 1.00 0.00 ONLY_REF_SPLICE SIK2^ENSG00000170145.5 chr11:111616359:+ PSMB8^ENSG00000204264.12 chr6:32843089:- YES_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr6]"] SIDT1--LARP1B 1 0 1.00 0.00 ONLY_REF_SPLICE SIDT1^ENSG00000072858.11 chr3:113533243:+ LARP1B^ENSG00000138709.19 chr4:128121826:+ YES_LDAS 0.0102 GT 1.5301 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr4]"] SHTN1--PARG 1 0 1.00 0.00 ONLY_REF_SPLICE SHTN1^ENSG00000187164.20 chr10:116968652:- PARG^ENSG00000227345.9 chr10:49935142:- YES_LDAS 0.0102 GT 1.5546 AG 1.6402 ["INTRACHROMOSOMAL[chr10:66.91Mb]"] SHISA5--ATRIP 1 0 1.00 0.00 ONLY_REF_SPLICE SHISA5^ENSG00000164054.15 chr3:48501137:- ATRIP^ENSG00000164053.21 chr3:48450037:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_INVERSION:-:+:[153]"] SHANK2--PPP1R3G 1 0 1.00 0.00 INCL_NON_REF_SPLICE SHANK2^ENSG00000162105.20 chr11:70807002:- PPP1R3G^ENSG00000219607.4 chr6:5085532:+ NO_LDAS 0.0102 GT 1.8323 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr6]"] SH2B1--SLC3A2 1 0 1.00 0.00 ONLY_REF_SPLICE SH2B1^ENSG00000178188.14 chr16:28846827:+ SLC3A2^ENSG00000168003.18 chr11:62882908:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr11]"] SGPP2--TRIP12 1 0 1.00 0.00 ONLY_REF_SPLICE SGPP2^ENSG00000163082.10 chr2:222474726:+ TRIP12^ENSG00000153827.14 chr2:229880128:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr2:7.20Mb]"] SGPP2--FLI1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SGPP2^ENSG00000163082.10 chr2:222559858:+ FLI1^ENSG00000151702.17 chr11:128694198:+ YES_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr11]"] SGK1--SNX22 1 0 1.00 0.00 INCL_NON_REF_SPLICE SGK1^ENSG00000118515.11 chr6:134169534:- SNX22^ENSG00000157734.14 chr15:64156737:+ NO_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr15]"] SFT2D2--MSLN 1 0 1.00 0.00 ONLY_REF_SPLICE SFT2D2^ENSG00000213064.10 chr1:168236770:+ MSLN^ENSG00000102854.16 chr16:766059:+ NO_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr16]"] SFSWAP--DUSP22 1 0 1.00 0.00 ONLY_REF_SPLICE SFSWAP^ENSG00000061936.10 chr12:131711447:+ DUSP22^ENSG00000112679.14 chr6:304628:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr6]"] SFMBT1--SCML2 1 0 1.00 0.00 ONLY_REF_SPLICE SFMBT1^ENSG00000163935.14 chr3:52906113:- SCML2^ENSG00000102098.19 chrX:18241379:- NO_LDAS 0.0102 GT 1.9329 AG 1.5219 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chrX]"] SF3B3--MAPKAPK5 1 0 1.00 0.00 INCL_NON_REF_SPLICE SF3B3^ENSG00000189091.13 chr16:70556270:+ MAPKAPK5^ENSG00000089022.14 chr12:111883603:+ YES_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr12]"] SF3B3--ATP5PB 1 0 1.00 0.00 ONLY_REF_SPLICE SF3B3^ENSG00000189091.13 chr16:70535420:+ ATP5PB^ENSG00000116459.11 chr1:111460917:+ YES_LDAS 0.0102 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr16--chr1]"] SF3B2--RGMA 1 0 1.00 0.00 INCL_NON_REF_SPLICE SF3B2^ENSG00000087365.16 chr11:66056894:+ RGMA^ENSG00000182175.14 chr15:93065923:- NO_LDAS 0.0102 GT 1.8256 AG 1.4256 ["INTERCHROMOSOMAL[chr11--chr15]"] SF3B2--LINC00667 1 0 1.00 0.00 INCL_NON_REF_SPLICE SF3B2^ENSG00000087365.16 chr11:66068279:+ LINC00667^ENSG00000263753.8 chr18:5246626:+ NO_LDAS 0.0102 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr18]"] SETDB1--SMG5 1 0 1.00 0.00 INCL_NON_REF_SPLICE SETDB1^ENSG00000143379.12 chr1:150946902:+ SMG5^ENSG00000198952.8 chr1:156277953:- NO_LDAS 0.0102 GT 1.7465 AG 1.8062 ["INTRACHROMOSOMAL[chr1:5.28Mb]"] SETD5--TMOD3 1 0 1.00 0.00 ONLY_REF_SPLICE SETD5^ENSG00000168137.18 chr3:9443417:+ TMOD3^ENSG00000138594.14 chr15:51908776:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr15]"] SETD3--RALGAPA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SETD3^ENSG00000183576.13 chr14:99405027:- RALGAPA1^ENSG00000174373.17 chr14:35725153:- YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr14:63.59Mb]"] SETD2--AL356056.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SETD2^ENSG00000181555.21 chr3:47046532:- AL356056.2^ENSG00000231187.3 chr10:46582250:- NO_LDAS 0.0102 GT 1.5301 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr10]"] SESTD1--ZNF638 1 0 1.00 0.00 ONLY_REF_SPLICE SESTD1^ENSG00000187231.14 chr2:179176448:- ZNF638^ENSG00000075292.19 chr2:71422814:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr2:107.67Mb]"] SERPINB9--TMEM258 1 0 1.00 0.00 ONLY_REF_SPLICE SERPINB9^ENSG00000170542.6 chr6:2900444:- TMEM258^ENSG00000134825.16 chr11:61790602:- YES_LDAS 0.0102 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr11]"] SERPINB9--RPUSD4 1 0 1.00 0.00 ONLY_REF_SPLICE SERPINB9^ENSG00000170542.6 chr6:2903201:- RPUSD4^ENSG00000165526.9 chr11:126205781:- YES_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr11]"] SERPINB1--SCAI 1 0 1.00 0.00 ONLY_REF_SPLICE SERPINB1^ENSG00000021355.13 chr6:2835856:- SCAI^ENSG00000173611.18 chr9:125029739:- YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr9]"] SERINC5--MSH3 1 0 1.00 0.00 ONLY_REF_SPLICE SERINC5^ENSG00000164300.17 chr5:80255896:- MSH3^ENSG00000113318.11 chr5:80725453:+ NO_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr5:0.40Mb]"] SERBP1--ZFYVE27 1 0 1.00 0.00 INCL_NON_REF_SPLICE SERBP1^ENSG00000142864.15 chr1:67424196:- ZFYVE27^ENSG00000155256.17 chr10:97760837:+ NO_LDAS 0.0102 GT 1.5546 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr10]"] SEPTIN7--ELMO1 1 0 1.00 0.00 ONLY_REF_SPLICE SEPTIN7^ENSG00000122545.20 chr7:35873775:+ ELMO1^ENSG00000155849.16 chr7:37342763:- YES_LDAS 0.0102 GT 1.9899 AG 1.9329 ["INTRACHROMOSOMAL[chr7:0.95Mb]"] SEPTIN7--CYTH1 1 0 1.00 0.00 ONLY_REF_SPLICE SEPTIN7^ENSG00000122545.20 chr7:35801270:+ CYTH1^ENSG00000108669.16 chr17:78709732:- NO_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr17]"] SEPTIN2--KLHL3 1 0 1.00 0.00 ONLY_REF_SPLICE SEPTIN2^ENSG00000168385.18 chr2:241315982:+ KLHL3^ENSG00000146021.15 chr5:137709856:- YES_LDAS 0.0102 GT 1.4566 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr5]"] SEPTIN14--AP006222.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AP006222.1^ENSG00000228463.10 chr1:297502:- YES_LDAS 0.0051 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr1]"] SEPTIN14--AP006222.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AP006222.1^ENSG00000228463.10 chr1:289370:- NO_LDAS 0.0102 GT 1.5546 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr1]"] SEPTIN14--AL031259.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AL031259.1^ENSG00000287411.1 chr6:170614324:+ YES_LDAS 0.0051 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr6]"] SEPTIN14--AC138035.1 1 0 0.20 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AC138035.1^ENSG00000238035.8 chr5:181316290:+ YES_LDAS 0.002 GT 1.5546 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr5]"] SENP6--RREB1 1 0 1.00 0.00 ONLY_REF_SPLICE SENP6^ENSG00000112701.18 chr6:75670720:+ RREB1^ENSG00000124782.20 chr6:7210804:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8295 ["INTRACHROMOSOMAL[chr6:68.35Mb]"] SENP6--ATG5 1 0 1.00 0.00 ONLY_REF_SPLICE SENP6^ENSG00000112701.18 chr6:75602576:+ ATG5^ENSG00000057663.16 chr6:106293106:- YES_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTRACHROMOSOMAL[chr6:30.33Mb]"] SEMA4C--DCP1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEMA4C^ENSG00000168758.11 chr2:96866410:- DCP1A^ENSG00000272886.6 chr3:53286905:- NO_LDAS 0.0102 GT 1.8892 AG 1.3996 ["INTERCHROMOSOMAL[chr2--chr3]"] SEM1--SLC25A13 1 0 1.00 0.00 ONLY_REF_SPLICE SEM1^ENSG00000127922.9 chr7:96694798:- SLC25A13^ENSG00000004864.14 chr7:96277338:- YES_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chr7:0.16Mb]"] SEM1--ELF1 1 0 1.00 0.00 ONLY_REF_SPLICE SEM1^ENSG00000127922.9 chr7:96709688:- ELF1^ENSG00000120690.16 chr13:40959016:- YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr13]"] SELENOI--DBNL 1 0 1.00 0.00 ONLY_REF_SPLICE SELENOI^ENSG00000138018.18 chr2:26383347:+ DBNL^ENSG00000136279.21 chr7:44050225:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr7]"] SELENOI--ATP13A1 1 0 1.00 0.00 ONLY_REF_SPLICE SELENOI^ENSG00000138018.18 chr2:26346289:+ ATP13A1^ENSG00000105726.17 chr19:19659987:- YES_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr19]"] SEH1L--SS18 1 0 1.00 0.00 ONLY_REF_SPLICE SEH1L^ENSG00000085415.16 chr18:12955609:+ SS18^ENSG00000141380.14 chr18:26018380:- YES_LDAS 0.0102 GT 1.8062 AG 1.7819 ["INTRACHROMOSOMAL[chr18:13.03Mb]"] SEC61A1--ADRM1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEC61A1^ENSG00000058262.10 chr3:128070171:+ ADRM1^ENSG00000130706.13 chr20:62306224:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr20]"] SEC24C--PPP3CB 1 0 1.00 0.00 ONLY_REF_SPLICE SEC24C^ENSG00000176986.16 chr10:73751243:+ PPP3CB^ENSG00000107758.16 chr10:73479517:- YES_LDAS 0.0102 GT 1.9329 AG 1.2310 ["INTRACHROMOSOMAL[chr10:0.25Mb]"] SEC24A--RARS1 1 0 1.00 0.00 ONLY_REF_SPLICE SEC24A^ENSG00000113615.13 chr5:134649173:+ RARS1^ENSG00000113643.9 chr5:168493894:+ NO_LDAS 0.0102 GT 1.6402 AG 1.7968 ["INTRACHROMOSOMAL[chr5:33.76Mb]"] SEC23IP--STOX1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEC23IP^ENSG00000107651.14 chr10:119940792:+ STOX1^ENSG00000165730.16 chr10:68881958:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr10:51.00Mb]"] SEC23A--XPO6 1 0 1.00 0.00 ONLY_REF_SPLICE SEC23A^ENSG00000100934.15 chr14:39064913:- XPO6^ENSG00000169180.12 chr16:28169909:- YES_LDAS 0.0102 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chr14--chr16]"] SEC14L1--SACM1L 1 0 1.00 0.00 ONLY_REF_SPLICE SEC14L1^ENSG00000129657.16 chr17:77143659:+ SACM1L^ENSG00000211456.13 chr3:45737583:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8256 ["INTERCHROMOSOMAL[chr17--chr3]"] SDHB--EIF1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE SDHB^ENSG00000117118.10 chr1:17022608:- EIF1B^ENSG00000114784.4 chr3:40309871:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr3]"] SDCCAG8--CDC14A 1 0 1.00 0.00 ONLY_REF_SPLICE SDCCAG8^ENSG00000054282.16 chr1:243426558:+ CDC14A^ENSG00000079335.20 chr1:100390732:+ NO_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr1:142.74Mb]"] SDC1--PWWP2B 1 0 1.00 0.00 ONLY_REF_SPLICE SDC1^ENSG00000115884.11 chr2:20224802:- PWWP2B^ENSG00000171813.14 chr10:132404626:+ NO_LDAS 0.0102 GT 1.5329 AG 1.5850 ["INTERCHROMOSOMAL[chr2--chr10]"] SCN2B--TMEM140 1 0 1.00 0.00 INCL_NON_REF_SPLICE SCN2B^ENSG00000149575.9 chr11:118167019:- TMEM140^ENSG00000146859.6 chr7:135164497:+ NO_LDAS 0.0102 GT 1.5656 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr7]"] SCMH1--TRIM69 1 0 1.00 0.00 ONLY_REF_SPLICE SCMH1^ENSG00000010803.16 chr1:41186121:- TRIM69^ENSG00000185880.13 chr15:44756368:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr15]"] SCMH1--SYNE3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SCMH1^ENSG00000010803.16 chr1:41186121:- SYNE3^ENSG00000176438.12 chr14:95475835:- YES_LDAS 0.0102 GT 1.9899 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr14]"] SCMH1--SMAP2 1 0 1.00 0.00 ONLY_REF_SPLICE SCMH1^ENSG00000010803.16 chr1:41242059:- SMAP2^ENSG00000084070.12 chr1:40406736:+ YES_LDAS 0.0102 GT 1.4716 AG 1.6895 ["INTRACHROMOSOMAL[chr1:0.60Mb]"] SCD--NDUFB8 1 0 0.50 0.00 ONLY_REF_SPLICE SCD^ENSG00000099194.6 chr10:100356764:+ NDUFB8^ENSG00000166136.16 chr10:100523929:- NO_LDAS 0.0051 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr10:0.16Mb]"] SCARF1--PSEN2 1 0 1.00 0.00 ONLY_REF_SPLICE SCARF1^ENSG00000074660.16 chr17:1645560:- PSEN2^ENSG00000143801.18 chr1:226897720:+ NO_LDAS 0.0102 GT 1.7968 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr1]"] SCAPER--LRCH3 1 0 1.00 0.00 ONLY_REF_SPLICE SCAPER^ENSG00000140386.13 chr15:76665653:- LRCH3^ENSG00000186001.14 chr3:197814908:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr3]"] SCAMP1--MTREX 1 0 1.00 0.00 ONLY_REF_SPLICE SCAMP1^ENSG00000085365.18 chr5:78421960:+ MTREX^ENSG00000039123.16 chr5:55340010:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9219 ["INTRACHROMOSOMAL[chr5:22.94Mb]"] SCAMP1--ARSB 1 0 1.00 0.00 ONLY_REF_SPLICE SCAMP1^ENSG00000085365.18 chr5:78360728:+ ARSB^ENSG00000113273.17 chr5:78969192:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr5:0.30Mb]"] SCAMP1--AP3B1 1 0 1.00 0.00 ONLY_REF_SPLICE SCAMP1^ENSG00000085365.18 chr5:78360728:+ AP3B1^ENSG00000132842.14 chr5:78089499:- YES_LDAS 0.0102 GT 1.7819 AG 1.8256 ["INTRACHROMOSOMAL[chr5:0.07Mb]","LOCAL_INVERSION:+:-:[65913]"] SCAI--NTMT1 1 0 1.00 0.00 ONLY_REF_SPLICE SCAI^ENSG00000173611.18 chr9:125142633:- NTMT1^ENSG00000148335.15 chr9:129632650:+ YES_LDAS 0.0102 GT 1.3996 AG 1.8295 ["INTRACHROMOSOMAL[chr9:4.47Mb]"] SCAI--CPNE1 1 0 1.00 0.00 ONLY_REF_SPLICE SCAI^ENSG00000173611.18 chr9:125142633:- CPNE1^ENSG00000214078.13 chr20:35632923:- NO_LDAS 0.0102 GT 1.3996 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr20]"] SCAF8--TES 1 0 1.00 0.00 ONLY_REF_SPLICE SCAF8^ENSG00000213079.10 chr6:154733930:+ TES^ENSG00000135269.18 chr7:116234534:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr7]"] SCAF8--STX7 1 0 1.00 0.00 ONLY_REF_SPLICE SCAF8^ENSG00000213079.10 chr6:154733930:+ STX7^ENSG00000079950.14 chr6:132503588:- YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr6:22.22Mb]"] SART3--DDX23 1 0 1.00 0.00 INCL_NON_REF_SPLICE SART3^ENSG00000075856.12 chr12:108536708:- DDX23^ENSG00000174243.10 chr12:48840066:- NO_LDAS 0.0102 GT 1.5329 AG 1.8892 ["INTRACHROMOSOMAL[chr12:59.67Mb]"] SARS2--AC127502.1 1 0 0.50 0.00 ONLY_REF_SPLICE SARS2^ENSG00000104835.15 chr19:38926205:- AC127502.1^ENSG00000215302.8 chr15:30474356:+ YES_LDAS 0.0051 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr15]"] SARS1--AHCYL1 1 0 1.00 0.00 ONLY_REF_SPLICE SARS1^ENSG00000031698.13 chr1:109236106:+ AHCYL1^ENSG00000168710.18 chr1:110020731:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.75Mb]"] SAR1A--NARF 1 0 1.00 0.00 ONLY_REF_SPLICE SAR1A^ENSG00000079332.15 chr10:70170413:- NARF^ENSG00000141562.18 chr17:82459992:+ YES_LDAS 0.0102 GT 1.6895 AG 1.4566 ["INTERCHROMOSOMAL[chr10--chr17]"] SAP30L--BTK 1 0 1.00 0.00 INCL_NON_REF_SPLICE SAP30L^ENSG00000164576.12 chr5:154446084:+ BTK^ENSG00000010671.16 chrX:101356108:- YES_LDAS 0.0102 GT 1.6049 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chrX]"] SAMD5--AL033504.1 1 0 1.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147733729:+ YES_LDAS 0.0102 GT 1.8295 AG 1.5219 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] SAMD5--AL033504.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147692400:+ YES_LDAS 0.0102 GT 1.8295 AG 1.6895 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] S1PR2--MIA2 1 0 1.00 0.00 ONLY_REF_SPLICE S1PR2^ENSG00000267534.4 chr19:10231204:- MIA2^ENSG00000150527.17 chr14:39276934:+ YES_LDAS 0.0102 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr14]"] RUBCN--SENP5 1 0 1.00 0.00 ONLY_REF_SPLICE RUBCN^ENSG00000145016.16 chr3:197736655:- SENP5^ENSG00000119231.11 chr3:196885151:+ YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr3:0.73Mb]"] RTTN--IQCB1 1 0 1.00 0.00 ONLY_REF_SPLICE RTTN^ENSG00000176225.15 chr18:70139599:- IQCB1^ENSG00000173226.17 chr3:121770574:- YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr18--chr3]"] RTTN--ACTR3 1 0 1.00 0.00 ONLY_REF_SPLICE RTTN^ENSG00000176225.15 chr18:70176675:- ACTR3^ENSG00000115091.12 chr2:113942186:+ NO_LDAS 0.0102 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr18--chr2]"] RTP4--ATP11B 1 0 1.00 0.00 ONLY_REF_SPLICE RTP4^ENSG00000136514.3 chr3:187368596:+ ATP11B^ENSG00000058063.16 chr3:182848476:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr3:4.45Mb]"] RTF1--NPIPB12 1 0 0.20 0.00 ONLY_REF_SPLICE RTF1^ENSG00000137815.14 chr15:41417313:+ NPIPB12^ENSG00000169203.16 chr16:29495607:- YES_LDAS 0.002 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr16]"] RTCA--AL392046.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RTCA^ENSG00000137996.13 chr1:100275723:+ AL392046.1^ENSG00000230534.6 chr10:35118296:- NO_LDAS 0.0102 GT 1.5301 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr10]"] RSRP1--VPS52 1 0 1.00 0.00 ONLY_REF_SPLICE RSRP1^ENSG00000117616.18 chr1:25245150:- VPS52^ENSG00000223501.9 chr6:33250987:- YES_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr6]"] RSRP1--BDP1 1 0 1.00 0.00 ONLY_REF_SPLICE RSRP1^ENSG00000117616.18 chr1:25245150:- BDP1^ENSG00000145734.19 chr5:71509465:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr5]"] RSL24D1--HBE1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RSL24D1^ENSG00000137876.11 chr15:55183355:- HBE1^ENSG00000213931.7 chr11:5269588:- NO_LDAS 0.0102 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr11]"] RRM2B--NCALD 1 0 1.00 0.00 ONLY_REF_SPLICE RRM2B^ENSG00000048392.12 chr8:102238827:- NCALD^ENSG00000104490.18 chr8:102020289:- YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr8:0.08Mb]","NEIGHBORS[79595]"] RRM2--ZNF607 1 0 1.00 0.00 ONLY_REF_SPLICE RRM2^ENSG00000171848.16 chr2:10123057:+ ZNF607^ENSG00000198182.13 chr19:37699895:- YES_LDAS 0.0102 GT 1.5219 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr19]"] RRAS2--RAC1 1 0 1.00 0.00 ONLY_REF_SPLICE RRAS2^ENSG00000133818.14 chr11:14358763:- RAC1^ENSG00000136238.18 chr7:6400126:+ YES_LDAS 0.0102 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr11--chr7]"] RRAGC--GBP2 1 0 1.00 0.00 ONLY_REF_SPLICE RRAGC^ENSG00000116954.8 chr1:38859410:- GBP2^ENSG00000162645.13 chr1:89110266:- NO_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr1:50.25Mb]"] RPUSD3--RABGGTB 1 0 1.00 0.00 ONLY_REF_SPLICE RPUSD3^ENSG00000156990.14 chr3:9843465:- RABGGTB^ENSG00000137955.16 chr1:75791285:+ YES_LDAS 0.0102 GT 1.7968 AG 1.7232 ["INTERCHROMOSOMAL[chr3--chr1]"] RPS8--ZCCHC8 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPS8^ENSG00000142937.12 chr1:44776798:+ ZCCHC8^ENSG00000033030.15 chr12:122480202:- NO_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr12]"] RPS8--PIK3R6 1 0 1.00 0.00 ONLY_REF_SPLICE RPS8^ENSG00000142937.12 chr1:44776140:+ PIK3R6^ENSG00000276231.5 chr17:8849885:- NO_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr17]"] RPS6KL1--CNOT10 1 0 1.00 0.00 ONLY_REF_SPLICE RPS6KL1^ENSG00000198208.12 chr14:74921978:- CNOT10^ENSG00000182973.19 chr3:32708670:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr3]"] RPS6KA5--CDC42BPA 1 0 1.00 0.00 ONLY_REF_SPLICE RPS6KA5^ENSG00000100784.12 chr14:90873632:- CDC42BPA^ENSG00000143776.18 chr1:227254155:- YES_LDAS 0.0102 GT 1.7056 AG 1.5656 ["INTERCHROMOSOMAL[chr14--chr1]"] RPS6KA4--FBXO31 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPS6KA4^ENSG00000162302.13 chr11:64371324:+ FBXO31^ENSG00000103264.18 chr16:87331468:- NO_LDAS 0.0102 GT 1.9656 AG 1.5546 ["INTERCHROMOSOMAL[chr11--chr16]"] RPS6KA2--RNASET2 1 0 1.00 0.00 ONLY_REF_SPLICE RPS6KA2^ENSG00000071242.12 chr6:166858200:- RNASET2^ENSG00000026297.16 chr6:166952548:- YES_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.02Mb]","LOCAL_REARRANGEMENT:-:[15662]"] RPS5--BRWD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPS5^ENSG00000083845.9 chr19:58394595:+ BRWD1^ENSG00000185658.14 chr21:39184409:- NO_LDAS 0.0102 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr21]"] RPS29P16--RPL11 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPS29P16^ENSG00000235354.1 chr7:103348724:+ RPL11^ENSG00000142676.14 chr1:23695834:+ YES_LDAS 0.0102 GT 1.9899 AG 1.5656 ["INTERCHROMOSOMAL[chr7--chr1]"] RPS25--RPS25P3 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPS25^ENSG00000118181.11 chr11:119017958:- RPS25P3^ENSG00000233416.1 chr2:20606630:- NO_LDAS 0.0102 GT 1.3383 AG 1.6895 ["INTERCHROMOSOMAL[chr11--chr2]"] RPS23--LSM6 1 0 1.00 0.00 ONLY_REF_SPLICE RPS23^ENSG00000186468.13 chr5:82277693:- LSM6^ENSG00000164167.12 chr4:146189622:+ NO_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr4]"] RPS21--RPS27 1 0 0.50 0.00 INCL_NON_REF_SPLICE RPS21^ENSG00000171858.18 chr20:62388495:+ RPS27^ENSG00000177954.14 chr1:153992111:+ YES_LDAS 0.0051 GT 1.5656 AG 1.8323 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr20--chr1]"] RPS19--ALX4 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPS19^ENSG00000105372.8 chr19:41861212:+ ALX4^ENSG00000052850.8 chr11:44309631:- NO_LDAS 0.0102 GT 1.9656 AG 1.4295 ["INTERCHROMOSOMAL[chr19--chr11]"] RPS14--NUDT13 1 0 0.50 0.00 INCL_NON_REF_SPLICE RPS14^ENSG00000164587.13 chr5:150447581:- NUDT13^ENSG00000166321.14 chr10:73126690:+ NO_LDAS 0.0051 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr10]"] RPS14--HSD17B14 1 0 0.50 0.00 INCL_NON_REF_SPLICE RPS14^ENSG00000164587.13 chr5:150447581:- HSD17B14^ENSG00000087076.9 chr19:48832717:- NO_LDAS 0.0051 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr19]"] RPS13--ASH2L 1 0 0.50 0.00 ONLY_REF_SPLICE RPS13^ENSG00000110700.7 chr11:17077168:- ASH2L^ENSG00000129691.16 chr8:38138816:+ YES_LDAS 0.0051 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr11--chr8]"] RPS12--TLK1 1 0 1.00 0.00 ONLY_REF_SPLICE RPS12^ENSG00000112306.8 chr6:132817061:+ TLK1^ENSG00000198586.14 chr2:171117857:- YES_LDAS 0.0102 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr2]"] RPS12--NOL7 1 0 1.00 0.00 ONLY_REF_SPLICE RPS12^ENSG00000112306.8 chr6:132815088:+ NOL7^ENSG00000225921.7 chr6:13620208:+ YES_LDAS 0.0102 GT 1.7968 AG 1.7232 ["INTRACHROMOSOMAL[chr6:119.18Mb]"] RPS12--HS2ST1 1 0 1.00 0.00 ONLY_REF_SPLICE RPS12^ENSG00000112306.8 chr6:132815088:+ HS2ST1^ENSG00000153936.17 chr1:87072934:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr1]"] RPN2--PRKX 1 0 1.00 0.00 ONLY_REF_SPLICE RPN2^ENSG00000118705.17 chr20:37184373:+ PRKX^ENSG00000183943.6 chrX:3655412:- YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chrX]"] RPLP0P7--AC020658.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPLP0P7^ENSG00000238069.1 chr2:156777937:- AC020658.1^ENSG00000244705.1 chr15:40313094:- NO_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr15]"] RPL7A--RNF126 1 0 1.00 0.00 ONLY_REF_SPLICE RPL7A^ENSG00000148303.17 chr9:133349042:+ RNF126^ENSG00000070423.18 chr19:650296:- YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr19]"] RPL7A--OSBPL3 1 0 1.00 0.00 ONLY_REF_SPLICE RPL7A^ENSG00000148303.17 chr9:133349042:+ OSBPL3^ENSG00000070882.13 chr7:24834736:- YES_LDAS 0.0102 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr7]"] RPL4P4--AGAP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPL4P4^ENSG00000229638.1 chr3:185418732:- AGAP2^ENSG00000135439.11 chr12:57727050:- YES_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr12]"] RPL35A--SEPTIN7 1 0 1.00 0.00 ONLY_REF_SPLICE RPL35A^ENSG00000182899.17 chr3:197954147:+ SEPTIN7^ENSG00000122545.20 chr7:35832798:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr7]"] RPL35A--NUP107 1 0 1.00 0.00 ONLY_REF_SPLICE RPL35A^ENSG00000182899.17 chr3:197954147:+ NUP107^ENSG00000111581.10 chr12:68715627:+ NO_LDAS 0.0102 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr12]"] RPL3--UBAP2L 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPL3^ENSG00000100316.16 chr22:39317389:- UBAP2L^ENSG00000143569.19 chr1:154251556:+ YES_LDAS 0.0102 GT 1.9219 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr1]"] RPL23AP53--SEPTIN14 1 0 1.00 0.00 ONLY_REF_SPLICE RPL23AP53^ENSG00000223508.5 chr8:219290:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0102 GT 1.8323 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] RPL21--TTC3 1 0 1.00 0.00 ONLY_REF_SPLICE RPL21^ENSG00000122026.10 chr13:27255354:+ TTC3^ENSG00000182670.13 chr21:37108392:+ YES_LDAS 0.0102 GT 1.4256 AG 1.9656 ["INTERCHROMOSOMAL[chr13--chr21]"] RPL18--GPAT2 1 0 1.00 0.00 ONLY_REF_SPLICE RPL18^ENSG00000063177.13 chr19:48616726:- GPAT2^ENSG00000186281.12 chr2:96023023:- NO_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr2]"] RPL18--AL513480.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPL18^ENSG00000063177.13 chr19:48616741:- AL513480.1^ENSG00000228664.1 chr1:182328489:+ YES_LDAS 0.0102 GT 1.7232 AG 1.7968 ["INTERCHROMOSOMAL[chr19--chr1]"] RPL12--RARS1 1 0 1.00 0.00 ONLY_REF_SPLICE RPL12^ENSG00000197958.13 chr9:127449281:- RARS1^ENSG00000113643.9 chr5:168488602:+ YES_LDAS 0.0102 GT 1.1033 AG 1.3383 ["INTERCHROMOSOMAL[chr9--chr5]"] RPL12--HPS1 1 0 1.00 0.00 ONLY_REF_SPLICE RPL12^ENSG00000197958.13 chr9:127449281:- HPS1^ENSG00000107521.20 chr10:98434091:- YES_LDAS 0.0102 GT 1.1033 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr10]"] RPL10A--UBE2D2 1 0 1.00 0.00 ONLY_REF_SPLICE RPL10A^ENSG00000198755.11 chr6:35468439:+ UBE2D2^ENSG00000131508.16 chr5:139600372:+ NO_LDAS 0.0102 GT 1.8323 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr5]"] RPH3AL--VPS53 1 0 1.00 0.00 ONLY_REF_SPLICE RPH3AL^ENSG00000181031.16 chr17:281768:- VPS53^ENSG00000141252.21 chr17:655953:- YES_LDAS 0.0102 GT 1.5628 AG 1.8295 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr17:0.12Mb]"] RPE--AGAP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPE^ENSG00000197713.15 chr2:210017887:+ AGAP5^ENSG00000172650.14 chr10:73697656:- YES_LDAS 0.0102 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr2--chr10]"] RPA2--PPP1R8 1 0 1.00 0.00 ONLY_REF_SPLICE RPA2^ENSG00000117748.10 chr1:27914063:- PPP1R8^ENSG00000117751.18 chr1:27838699:+ YES_LDAS 0.0102 GT 1.6729 AG 1.7056 ["INTRACHROMOSOMAL[chr1:0.04Mb]","LOCAL_INVERSION:-:+:[39848]"] RP1L1--SNAPC4 1 0 1.00 0.00 INCL_NON_REF_SPLICE RP1L1^ENSG00000183638.6 chr8:10608297:- SNAPC4^ENSG00000165684.4 chr9:136383441:- NO_LDAS 0.0102 GT 1.5058 AG 1.5656 ["INTERCHROMOSOMAL[chr8--chr9]"] ROCK1--INO80C 1 0 1.00 0.00 ONLY_REF_SPLICE ROCK1^ENSG00000067900.8 chr18:21044102:- INO80C^ENSG00000153391.16 chr18:35480563:- YES_LDAS 0.0102 GT 1.4566 AG 1.9086 ["INTRACHROMOSOMAL[chr18:14.34Mb]"] RNVU1-27--NVL 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNVU1-27^ENSG00000274210.1 chr1:148522796:+ NVL^ENSG00000143748.18 chr1:224268133:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr1:75.70Mb]"] RNU6-13P--TM9SF4 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNU6-13P^ENSG00000206975.1 chr8:56917190:+ TM9SF4^ENSG00000101337.16 chr20:32145113:+ YES_LDAS 0.0102 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr20]"] RNU6-13P--PAFAH1B2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNU6-13P^ENSG00000206975.1 chr8:56917190:+ PAFAH1B2^ENSG00000168092.14 chr11:117152386:+ YES_LDAS 0.0102 GT 1.7232 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr11]"] RNU6-13P--AC048338.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNU6-13P^ENSG00000206975.1 chr8:56917190:+ AC048338.2^ENSG00000284934.2 chr12:122216796:- YES_LDAS 0.0102 GT 1.7232 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr12]"] RNF8--MAD1L1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF8^ENSG00000112130.17 chr6:37360574:+ MAD1L1^ENSG00000002822.16 chr7:1816228:- YES_LDAS 0.0102 GT 1.8295 AG 1.5546 ["INTERCHROMOSOMAL[chr6--chr7]"] RNF34--KDM2B 1 0 1.00 0.00 ONLY_REF_SPLICE RNF34^ENSG00000170633.16 chr12:121417911:+ KDM2B^ENSG00000089094.19 chr12:121453344:- YES_LDAS 0.0102 GT 1.7465 AG 1.8295 ["INTRACHROMOSOMAL[chr12:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[1527]"] RNF217--PTPRK 1 0 1.00 0.00 ONLY_REF_SPLICE RNF217^ENSG00000146373.16 chr6:124963426:+ PTPRK^ENSG00000152894.15 chr6:128219096:- NO_LDAS 0.0102 GT 1.8892 AG 1.5329 ["TumorFusionsNAR2018","INTRACHROMOSOMAL[chr6:2.88Mb]"] RNF207--N4BP2L2 1 0 1.00 0.00 ONLY_REF_SPLICE RNF207^ENSG00000158286.13 chr1:6206726:+ N4BP2L2^ENSG00000244754.9 chr13:32522270:- YES_LDAS 0.0102 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr13]"] RNF19A--BCOR 1 0 1.00 0.00 ONLY_REF_SPLICE RNF19A^ENSG00000034677.13 chr8:100309867:- BCOR^ENSG00000183337.18 chrX:40077969:- YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chrX]"] RNF180--UBR2 1 0 1.00 0.00 ONLY_REF_SPLICE RNF180^ENSG00000164197.12 chr5:64217396:+ UBR2^ENSG00000024048.11 chr6:42592151:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr6]"] RNF169--INTS4 1 0 1.00 0.00 ONLY_REF_SPLICE RNF169^ENSG00000166439.6 chr11:74810330:+ INTS4^ENSG00000149262.17 chr11:77961138:- YES_LDAS 0.0102 GT 1.9219 AG 1.9656 ["INTRACHROMOSOMAL[chr11:3.04Mb]"] RNF157--RABEP1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF157^ENSG00000141576.16 chr17:76173702:- RABEP1^ENSG00000029725.17 chr17:5354359:+ YES_LDAS 0.0102 GT 1.9899 AG 1.6895 ["INTRACHROMOSOMAL[chr17:70.76Mb]"] RNF157--DUSP22 1 0 1.00 0.00 ONLY_REF_SPLICE RNF157^ENSG00000141576.16 chr17:76212364:- DUSP22^ENSG00000112679.14 chr6:335114:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr6]"] RNF145--EBF1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF145^ENSG00000145860.12 chr5:159203434:- EBF1^ENSG00000164330.17 chr5:158731157:- NO_LDAS 0.0102 GT 1.7819 AG 1.6895 ["INTRACHROMOSOMAL[chr5:0.06Mb]","NEIGHBORS[57493]"] RNF144B--ZMYND11 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF144B^ENSG00000137393.10 chr6:18459661:+ ZMYND11^ENSG00000015171.20 chr10:236838:+ NO_LDAS 0.0102 GT 1.8256 AG 1.6402 ["INTERCHROMOSOMAL[chr6--chr10]"] RNF139--MYO1C 1 0 1.00 0.00 ONLY_REF_SPLICE RNF139^ENSG00000170881.5 chr8:124475290:+ MYO1C^ENSG00000197879.17 chr17:1484303:- YES_LDAS 0.0102 GT 1.5219 AG 1.8323 ["INTERCHROMOSOMAL[chr8--chr17]"] RNF13--MBNL1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF13^ENSG00000082996.20 chr3:149813353:+ MBNL1^ENSG00000152601.17 chr3:152414941:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr3:2.28Mb]"] RNF126--TUBA1A 1 0 0.33 0.00 ONLY_REF_SPLICE RNF126^ENSG00000070423.18 chr19:663047:- TUBA1A^ENSG00000167552.15 chr12:49186833:- NO_LDAS 0.0034 GT 1.3996 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr12]"] RNF115--GPR89A 1 0 0.50 0.00 ONLY_REF_SPLICE RNF115^ENSG00000265491.5 chr1:145823772:- GPR89A^ENSG00000117262.19 chr1:145663329:+ YES_LDAS 0.0051 GT 1.6895 AG 1.8256 ["INTRACHROMOSOMAL[chr1:0.07Mb]","LOCAL_INVERSION:-:+:[68218]"] RNF111--SEC31A 1 0 1.00 0.00 ONLY_REF_SPLICE RNF111^ENSG00000157450.16 chr15:59081284:+ SEC31A^ENSG00000138674.17 chr4:82881937:- NO_LDAS 0.0102 GT 1.9086 AG 1.5058 ["INTERCHROMOSOMAL[chr15--chr4]"] RNA5-8SN2--FCHSD1 1 0 0.50 0.00 INCL_NON_REF_SPLICE RNA5-8SN2^ENSG00000278233.1 chr21:8212582:+ FCHSD1^ENSG00000197948.11 chr5:141643148:- YES_LDAS 0.0051 GT 1.9899 AG 1.6402 ["INTERCHROMOSOMAL[chr21--chr5]"] RMI2--STK10 1 0 1.00 0.00 INCL_NON_REF_SPLICE RMI2^ENSG00000175643.10 chr16:11345766:+ STK10^ENSG00000072786.13 chr5:172057286:- NO_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr5]"] RMDN3--TEX13B 1 0 1.00 0.00 INCL_NON_REF_SPLICE RMDN3^ENSG00000137824.16 chr15:40745180:- TEX13B^ENSG00000170925.3 chrX:107982153:- NO_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chrX]"] RLF--SMAP2 1 0 1.00 0.00 ONLY_REF_SPLICE RLF^ENSG00000117000.9 chr1:40161636:+ SMAP2^ENSG00000084070.12 chr1:40413016:+ YES_LDAS 0.0102 GT 1.9086 AG 1.3753 ["ChimerSeq","INTRACHROMOSOMAL[chr1:0.10Mb]"] RLF--ATP5F1C 1 0 1.00 0.00 ONLY_REF_SPLICE RLF^ENSG00000117000.9 chr1:40161636:+ ATP5F1C^ENSG00000165629.20 chr10:7806974:+ YES_LDAS 0.0102 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr10]"] RITA1--YES1 1 0 1.00 0.00 ONLY_REF_SPLICE RITA1^ENSG00000139405.16 chr12:113187048:+ YES1^ENSG00000176105.14 chr18:756835:- YES_LDAS 0.0102 GT 1.5546 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr18]"] RIMS1--SYNCRIP 1 0 1.00 0.00 INCL_NON_REF_SPLICE RIMS1^ENSG00000079841.18 chr6:72260925:+ SYNCRIP^ENSG00000135316.19 chr6:85619417:- NO_LDAS 0.0102 GT 1.5219 AG 1.8062 ["INTRACHROMOSOMAL[chr6:13.20Mb]"] RIDA--CCER1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RIDA^ENSG00000132541.11 chr8:98117027:- CCER1^ENSG00000197651.4 chr12:90954220:- NO_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTERCHROMOSOMAL[chr8--chr12]"] RHPN2--HSD17B7 1 0 1.00 0.00 ONLY_REF_SPLICE RHPN2^ENSG00000131941.8 chr19:33021571:- HSD17B7^ENSG00000132196.15 chr1:162799743:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] RHOT2--NME3 1 0 1.00 0.00 INCL_NON_REF_SPLICE RHOT2^ENSG00000140983.14 chr16:669662:+ NME3^ENSG00000103024.7 chr16:1770993:- NO_LDAS 0.0102 GT 1.6895 AG 1.7232 ["INTRACHROMOSOMAL[chr16:1.10Mb]"] RHOT1P1--SUZ12 1 0 0.33 0.00 INCL_NON_REF_SPLICE RHOT1P1^ENSG00000266145.1 chr18:14222336:+ SUZ12^ENSG00000178691.11 chr17:31940286:+ YES_LDAS 0.0034 GC 1.4566 AG 1.8323 ["INTERCHROMOSOMAL[chr18--chr17]"] RHOH--PARP15 1 0 1.00 0.00 ONLY_REF_SPLICE RHOH^ENSG00000168421.13 chr4:40197300:+ PARP15^ENSG00000173200.13 chr3:122626827:+ YES_LDAS 0.0102 GT 1.9899 AG 1.6402 ["INTERCHROMOSOMAL[chr4--chr3]"] RHOF--AC084018.3 1 0 1.00 0.00 ONLY_REF_SPLICE RHOF^ENSG00000139725.8 chr12:121793152:- AC084018.3^ENSG00000286586.1 chr12:121689068:+ NO_LDAS 0.0102 GT 1.8892 AG 1.5628 ["INTRACHROMOSOMAL[chr12:0.09Mb]","LOCAL_INVERSION:-:+:[88374]"] RGS14--ZMIZ2 1 0 1.00 0.00 ONLY_REF_SPLICE RGS14^ENSG00000169220.18 chr5:177358069:+ ZMIZ2^ENSG00000122515.15 chr7:44756188:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr7]"] RGS14--OBSCN 1 0 1.00 0.00 ONLY_REF_SPLICE RGS14^ENSG00000169220.18 chr5:177371396:+ OBSCN^ENSG00000154358.23 chr1:228213441:+ YES_LDAS 0.0102 GT 1.6402 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr1]"] RGS14--METTL27 1 0 1.00 0.00 INCL_NON_REF_SPLICE RGS14^ENSG00000169220.18 chr5:177371031:+ METTL27^ENSG00000165171.11 chr7:73840034:- NO_LDAS 0.0102 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr7]"] RGP1--TXNL4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE RGP1^ENSG00000107185.10 chr9:35757197:+ TXNL4A^ENSG00000141759.15 chr18:79977701:- NO_LDAS 0.0102 GT 1.5058 AG 1.7056 ["INTERCHROMOSOMAL[chr9--chr18]"] RGL2--CMSS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RGL2^ENSG00000237441.10 chr6:33292455:- CMSS1^ENSG00000184220.12 chr3:100040745:+ YES_LDAS 0.0102 GT 1.9329 AG 1.5546 ["INTERCHROMOSOMAL[chr6--chr3]"] RFX7--BTBD1 1 0 1.00 0.00 ONLY_REF_SPLICE RFX7^ENSG00000181827.15 chr15:56243125:- BTBD1^ENSG00000064726.10 chr15:83041925:- YES_LDAS 0.0102 GT 1.9086 AG 1.9899 ["INTRACHROMOSOMAL[chr15:26.77Mb]"] RFX1--AP000721.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RFX1^ENSG00000132005.9 chr19:13993525:- AP000721.2^ENSG00000256824.1 chr11:64103581:+ NO_LDAS 0.0102 GT 1.8062 AG 0.9056 ["INTERCHROMOSOMAL[chr19--chr11]"] RFC2--RBM39 1 0 1.00 0.00 ONLY_REF_SPLICE RFC2^ENSG00000049541.11 chr7:74243146:- RBM39^ENSG00000131051.24 chr20:35713096:- YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr20]"] REXO4--TRIM24 1 0 1.00 0.00 INCL_NON_REF_SPLICE REXO4^ENSG00000148300.12 chr9:133417879:- TRIM24^ENSG00000122779.18 chr7:138460849:+ YES_LDAS 0.0102 GT 1.6402 AG 1.4256 ["INTERCHROMOSOMAL[chr9--chr7]"] REXO1--PRKCSH 1 0 1.00 0.00 INCL_NON_REF_SPLICE REXO1^ENSG00000079313.15 chr19:1826974:- PRKCSH^ENSG00000130175.10 chr19:11447589:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9219 ["INTRACHROMOSOMAL[chr19:9.59Mb]"] REV1--PCCA 1 0 1.00 0.00 ONLY_REF_SPLICE REV1^ENSG00000135945.10 chr2:99489817:- PCCA^ENSG00000175198.17 chr13:100330561:+ YES_LDAS 0.0102 GT 1.4566 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr13]"] REV1--LIMS1 1 0 0.33 0.00 ONLY_REF_SPLICE REV1^ENSG00000135945.10 chr2:99489817:- LIMS1^ENSG00000169756.16 chr2:108659605:+ YES_LDAS 0.0034 GT 1.4566 AG 1.7819 ["INTRACHROMOSOMAL[chr2:9.04Mb]"] REV1--ARL6IP6 1 0 1.00 0.00 ONLY_REF_SPLICE REV1^ENSG00000135945.10 chr2:99489817:- ARL6IP6^ENSG00000177917.11 chr2:152720533:+ YES_LDAS 0.0102 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr2:53.23Mb]"] RETREG1--NFIB 1 0 1.00 0.00 ONLY_REF_SPLICE RETREG1^ENSG00000154153.14 chr5:16616652:- NFIB^ENSG00000147862.17 chr9:14307520:- YES_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr9]"] RET--NCOA4 1 0 1.00 0.00 INCL_NON_REF_SPLICE RET^ENSG00000165731.20 chr10:43118459:+ NCOA4^ENSG00000266412.6 chr10:46012978:- YES_LDAS 0.0102 AT 1.8323 TT 1.8256 ["ChimerKB","chimerdb_pubmed","DEEPEST2019","ChimerPub","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr10:2.87Mb]"] REST--ODC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE REST^ENSG00000084093.19 chr4:56930949:+ ODC1^ENSG00000115758.13 chr2:10445233:- YES_LDAS 0.0102 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr2]"] RELCH--CACNA1E 1 0 1.00 0.00 INCL_NON_REF_SPLICE RELCH^ENSG00000134444.15 chr18:62234902:+ CACNA1E^ENSG00000198216.12 chr1:181510477:+ NO_LDAS 0.0102 AT 1.7819 AC 1.9656 ["INTERCHROMOSOMAL[chr18--chr1]"] REEP5--PRDX2 1 0 1.00 0.00 ONLY_REF_SPLICE REEP5^ENSG00000129625.13 chr5:112902380:- PRDX2^ENSG00000167815.12 chr19:12797166:- YES_LDAS 0.0102 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr19]"] REEP5--MAN2A1 1 0 1.00 0.00 ONLY_REF_SPLICE REEP5^ENSG00000129625.13 chr5:112902380:- MAN2A1^ENSG00000112893.10 chr5:109729342:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTRACHROMOSOMAL[chr5:3.01Mb]"] RECQL5--TNPO2 1 0 1.00 0.00 ONLY_REF_SPLICE RECQL5^ENSG00000108469.15 chr17:75651186:- TNPO2^ENSG00000105576.15 chr19:12720990:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr19]"] REC8--DDX24 1 0 1.00 0.00 INCL_NON_REF_SPLICE REC8^ENSG00000100918.13 chr14:24176901:+ DDX24^ENSG00000089737.17 chr14:94048626:- NO_LDAS 0.0102 GT 1.8062 AG 1.9899 ["INTRACHROMOSOMAL[chr14:69.87Mb]"] RDH11--WBP1L 1 0 1.00 0.00 ONLY_REF_SPLICE RDH11^ENSG00000072042.13 chr14:67685015:- WBP1L^ENSG00000166272.18 chr10:102797993:+ NO_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr10]"] RCSD1--MRPS14 1 0 1.00 0.00 ONLY_REF_SPLICE RCSD1^ENSG00000198771.11 chr1:167630429:+ MRPS14^ENSG00000120333.4 chr1:175018576:- NO_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr1:7.30Mb]"] RCOR1--JADE1 1 0 1.00 0.00 ONLY_REF_SPLICE RCOR1^ENSG00000089902.10 chr14:102722416:+ JADE1^ENSG00000077684.16 chr4:128871355:+ YES_LDAS 0.0102 GT 1.2867 AG 1.5058 ["INTERCHROMOSOMAL[chr14--chr4]"] RCL1--AC103719.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RCL1^ENSG00000120158.12 chr9:4834301:+ AC103719.1^ENSG00000254040.2 chr8:21023463:+ NO_LDAS 0.0102 GT 0.6998 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr8]"] RCC1L--NAXD 1 0 1.00 0.00 ONLY_REF_SPLICE RCC1L^ENSG00000274523.5 chr7:75052711:- NAXD^ENSG00000213995.12 chr13:110622216:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr13]"] RCC1L--HNRNPA3 1 0 0.50 0.00 INCL_NON_REF_SPLICE RCC1L^ENSG00000274523.5 chr7:75073679:- HNRNPA3^ENSG00000170144.21 chr2:177215563:+ YES_LDAS 0.0051 GC 1.4716 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr2]"] RCC1L--CASC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RCC1L^ENSG00000274523.5 chr7:75058588:- CASC2^ENSG00000177640.16 chr10:118206798:+ NO_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr10]"] RC3H2--WDR59 1 0 1.00 0.00 ONLY_REF_SPLICE RC3H2^ENSG00000056586.16 chr9:122892909:- WDR59^ENSG00000103091.15 chr16:74965822:- YES_LDAS 0.0102 GT 1.5219 AG 1.9899 ["INTERCHROMOSOMAL[chr9--chr16]"] RBM5--CSNK1D 1 0 1.00 0.00 ONLY_REF_SPLICE RBM5^ENSG00000003756.17 chr3:50093875:+ CSNK1D^ENSG00000141551.14 chr17:82255577:- YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr17]"] RBM41--AC061958.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RBM41^ENSG00000089682.16 chrX:107115862:- AC061958.1^ENSG00000287069.1 chr3:19484573:- NO_LDAS 0.0102 GT 1.8256 AG 1.5301 ["INTERCHROMOSOMAL[chrX--chr3]"] RBM39--CCDC136 1 0 1.00 0.00 INCL_NON_REF_SPLICE RBM39^ENSG00000131051.24 chr20:35729312:- CCDC136^ENSG00000128596.17 chr7:128815701:+ NO_LDAS 0.0102 GT 1.9329 AG 1.1589 ["INTERCHROMOSOMAL[chr20--chr7]"] RBM3--RPL10 1 0 0.25 0.00 ONLY_REF_SPLICE RBM3^ENSG00000102317.18 chrX:48575667:+ RPL10^ENSG00000147403.18 chrX:154400464:+ YES_LDAS 0.0025 GT 1.7819 AG 1.9086 ["INTRACHROMOSOMAL[chrX:105.81Mb]"] RBM3--CSF2RB 1 0 1.00 0.00 ONLY_REF_SPLICE RBM3^ENSG00000102317.18 chrX:48577109:+ CSF2RB^ENSG00000100368.14 chr22:36929402:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8295 ["INTERCHROMOSOMAL[chrX--chr22]"] RBM28--EXOC4 1 0 1.00 0.00 ONLY_REF_SPLICE RBM28^ENSG00000106344.8 chr7:128317659:- EXOC4^ENSG00000131558.15 chr7:133317284:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr7:4.91Mb]"] RBM19--NDUFAF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE RBM19^ENSG00000122965.11 chr12:113818103:- NDUFAF3^ENSG00000178057.15 chr3:49021677:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr3]"] RBM14--C11orf80 1 0 1.00 0.00 ONLY_REF_SPLICE RBM14^ENSG00000239306.5 chr11:66617057:+ C11orf80^ENSG00000173715.18 chr11:66759043:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9656 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr11:0.11Mb]"] RBL2--N4BP1 1 0 1.00 0.00 ONLY_REF_SPLICE RBL2^ENSG00000103479.17 chr16:53434796:+ N4BP1^ENSG00000102921.8 chr16:48562444:- YES_LDAS 0.0102 GT 1.9329 AG 1.4566 ["INTRACHROMOSOMAL[chr16:4.81Mb]"] RBCK1--EEF1AKMT2 1 0 1.00 0.00 ONLY_REF_SPLICE RBCK1^ENSG00000125826.21 chr20:410025:+ EEF1AKMT2^ENSG00000203791.15 chr10:124774782:- YES_LDAS 0.0102 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr10]"] RBBP4--C2orf69 1 0 0.50 0.00 ONLY_REF_SPLICE RBBP4^ENSG00000162521.19 chr1:32662337:+ C2orf69^ENSG00000178074.6 chr2:199925062:+ NO_LDAS 0.0051 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr2]"] RB1--UBAP2L 1 0 1.00 0.00 ONLY_REF_SPLICE RB1^ENSG00000139687.16 chr13:48307406:+ UBAP2L^ENSG00000143569.19 chr1:154259948:+ YES_LDAS 0.0102 GT 1.5058 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chr1]"] RAVER1--RADIL 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAVER1^ENSG00000161847.14 chr19:10321198:- RADIL^ENSG00000157927.17 chr7:4805525:- NO_LDAS 0.0102 GT 1.5546 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr7]"] RASSF1--HBD 1 0 1.00 0.00 INCL_NON_REF_SPLICE RASSF1^ENSG00000068028.17 chr3:50331559:- HBD^ENSG00000223609.11 chr11:5234378:- NO_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr11]"] RASA3--TFDP1 1 0 1.00 0.00 ONLY_REF_SPLICE RASA3^ENSG00000185989.11 chr13:113999585:- TFDP1^ENSG00000198176.13 chr13:113610996:+ YES_LDAS 0.0102 GT 1.5546 AG 1.9899 ["INTRACHROMOSOMAL[chr13:0.34Mb]"] RARA--BMI1 1 0 1.00 0.00 ONLY_REF_SPLICE RARA^ENSG00000131759.18 chr17:40331396:+ BMI1^ENSG00000168283.14 chr10:22326431:+ YES_LDAS 0.0102 GT 1.4716 AG 1.7968 ["INTERCHROMOSOMAL[chr17--chr10]"] RAP2A--OVOL2 1 0 0.50 0.00 ONLY_REF_SPLICE RAP2A^ENSG00000125249.7 chr13:97434784:+ OVOL2^ENSG00000125850.11 chr20:17957037:- NO_LDAS 0.0051 GT 1.9086 AG 1.9219 ["INTERCHROMOSOMAL[chr13--chr20]"] RAP1GDS1--DCUN1D4 1 0 1.00 0.00 ONLY_REF_SPLICE RAP1GDS1^ENSG00000138698.15 chr4:98261569:+ DCUN1D4^ENSG00000109184.15 chr4:51886568:+ YES_LDAS 0.0102 GT 1.7465 AG 1.8256 ["INTRACHROMOSOMAL[chr4:46.34Mb]"] RAP1B--NUP107 1 0 1.00 0.00 ONLY_REF_SPLICE RAP1B^ENSG00000127314.18 chr12:68611043:+ NUP107^ENSG00000111581.10 chr12:68688962:+ YES_LDAS 0.0102 GT 1.7968 AG 1.7465 ["INTRACHROMOSOMAL[chr12:0.02Mb]","NEIGHBORS[15050]"] RAP1A--BCL2L13 1 0 1.00 0.00 ONLY_REF_SPLICE RAP1A^ENSG00000116473.14 chr1:111619934:+ BCL2L13^ENSG00000099968.18 chr22:17702243:+ NO_LDAS 0.0102 GT 1.2310 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr22]"] RANBP2--AL591043.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RANBP2^ENSG00000153201.16 chr2:108772581:+ AL591043.2^ENSG00000236021.2 chr1:176417982:+ NO_LDAS 0.0102 GT 1.5546 AG 1.2729 ["INTERCHROMOSOMAL[chr2--chr1]"] RANBP10--OCIAD1 1 0 1.00 0.00 ONLY_REF_SPLICE RANBP10^ENSG00000141084.11 chr16:67772034:- OCIAD1^ENSG00000109180.15 chr4:48833401:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr4]"] RALGPS1--EAF2 1 0 1.00 0.00 ONLY_REF_SPLICE RALGPS1^ENSG00000136828.19 chr9:127174782:+ EAF2^ENSG00000145088.9 chr3:121844453:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr3]"] RAD54B--AC090825.1 1 0 1.00 0.00 ONLY_REF_SPLICE RAD54B^ENSG00000197275.14 chr8:94467405:- AC090825.1^ENSG00000259363.6 chr15:99876953:+ YES_LDAS 0.0102 GT 1.4295 AG 1.9219 ["INTERCHROMOSOMAL[chr8--chr15]"] RAD51C--TXNDC11 1 0 1.00 0.00 ONLY_REF_SPLICE RAD51C^ENSG00000108384.15 chr17:58724100:+ TXNDC11^ENSG00000153066.13 chr16:11721435:- NO_LDAS 0.0102 GT 1.5058 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr16]"] RAD51B--CEP170P1 1 0 1.00 0.00 ONLY_REF_SPLICE RAD51B^ENSG00000182185.18 chr14:67887204:+ CEP170P1^ENSG00000154608.14 chr4:118493552:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr4]"] RAD51B--CCNI 1 0 1.00 0.00 ONLY_REF_SPLICE RAD51B^ENSG00000182185.18 chr14:67887204:+ CCNI^ENSG00000118816.11 chr4:77055380:- YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr4]"] RAD50--MBTPS1 1 0 1.00 0.00 ONLY_REF_SPLICE RAD50^ENSG00000113522.14 chr5:132618294:+ MBTPS1^ENSG00000140943.17 chr16:84060813:- YES_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr16]"] RAD23B--U2AF2 1 0 1.00 0.00 ONLY_REF_SPLICE RAD23B^ENSG00000119318.13 chr9:107325004:+ U2AF2^ENSG00000063244.13 chr19:55668507:+ YES_LDAS 0.0102 GT 1.6895 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr19]"] RAC2--CCDC47 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAC2^ENSG00000128340.15 chr22:37232897:- CCDC47^ENSG00000108588.14 chr17:63756542:- NO_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr17]"] RAC2--CBLN3 1 0 1.00 0.00 ONLY_REF_SPLICE RAC2^ENSG00000128340.15 chr22:37231932:- CBLN3^ENSG00000139899.11 chr14:24428405:- YES_LDAS 0.0102 GT 1.8062 AG 1.9219 ["INTERCHROMOSOMAL[chr22--chr14]"] RABGGTB--ARHGEF18 1 0 1.00 0.00 INCL_NON_REF_SPLICE RABGGTB^ENSG00000137955.16 chr1:75794990:+ ARHGEF18^ENSG00000104880.19 chr19:7441937:+ NO_LDAS 0.0102 GT 1.5656 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr19]"] RABGGTB--ANAPC5 1 0 1.00 0.00 ONLY_REF_SPLICE RABGGTB^ENSG00000137955.16 chr1:75787604:+ ANAPC5^ENSG00000089053.13 chr12:121342069:- NO_LDAS 0.0102 GT 1.4566 AG 1.7056 ["INTERCHROMOSOMAL[chr1--chr12]"] RABEP2--NABP1 1 0 1.00 0.00 ONLY_REF_SPLICE RABEP2^ENSG00000177548.13 chr16:28919786:- NABP1^ENSG00000173559.15 chr2:191685599:+ YES_LDAS 0.0102 GT 1.5329 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr2]"] RAB8B--ADAM10 1 0 1.00 0.00 ONLY_REF_SPLICE RAB8B^ENSG00000166128.13 chr15:63189748:+ ADAM10^ENSG00000137845.15 chr15:58717727:- YES_LDAS 0.0102 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr15:4.44Mb]"] RAB5A--PPP1CB 1 0 1.00 0.00 ONLY_REF_SPLICE RAB5A^ENSG00000144566.11 chr3:19978403:+ PPP1CB^ENSG00000213639.10 chr2:28783907:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr2]"] RAB40A--UNG 1 0 0.50 0.00 INCL_NON_REF_SPLICE RAB40A^ENSG00000172476.4 chrX:103500193:- UNG^ENSG00000076248.11 chr12:109103433:+ NO_LDAS 0.0051 GT 1.4566 AG 1.6895 ["INTERCHROMOSOMAL[chrX--chr12]"] RAB3GAP2--SCOC 1 0 1.00 0.00 ONLY_REF_SPLICE RAB3GAP2^ENSG00000118873.16 chr1:220272223:- SCOC^ENSG00000153130.18 chr4:140379121:+ YES_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr4]"] RAB3GAP2--NEK7 1 0 1.00 0.00 ONLY_REF_SPLICE RAB3GAP2^ENSG00000118873.16 chr1:220272223:- NEK7^ENSG00000151414.15 chr1:198232553:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr1:21.83Mb]"] RAB3GAP1--METTL8 1 0 1.00 0.00 ONLY_REF_SPLICE RAB3GAP1^ENSG00000115839.18 chr2:135135932:+ METTL8^ENSG00000123600.20 chr2:171331867:- YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr2:36.14Mb]"] RAB33B--AC104187.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB33B^ENSG00000172007.7 chr4:139454306:+ AC104187.1^ENSG00000271937.1 chr3:44338529:- NO_LDAS 0.0102 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr3]"] RAB27A--RSL24D1 1 0 1.00 0.00 ONLY_REF_SPLICE RAB27A^ENSG00000069974.16 chr15:55270165:- RSL24D1^ENSG00000137876.11 chr15:55192833:- NO_LDAS 0.0102 GT 1.9329 AG 1.7968 ["INTRACHROMOSOMAL[chr15:0.01Mb]","NEIGHBORS[5917]"] RAB1A--CARF 1 0 1.00 0.00 ONLY_REF_SPLICE RAB1A^ENSG00000138069.18 chr2:65090983:- CARF^ENSG00000138380.18 chr2:202983506:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8295 ["INTRACHROMOSOMAL[chr2:137.78Mb]"] RAB11FIP3--PRELID1 1 0 0.33 0.00 INCL_NON_REF_SPLICE RAB11FIP3^ENSG00000090565.17 chr16:426477:+ PRELID1^ENSG00000169230.10 chr5:177306427:+ YES_LDAS 0.0034 GT 1.3383 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr5]"] RAB11FIP3--MIR193BHG 1 0 1.00 0.00 ONLY_REF_SPLICE RAB11FIP3^ENSG00000090565.17 chr16:489000:+ MIR193BHG^ENSG00000262454.4 chr16:14326013:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr16:13.78Mb]"] RAB11FIP3--MAPKAPK5 1 0 1.00 0.00 ONLY_REF_SPLICE RAB11FIP3^ENSG00000090565.17 chr16:489000:+ MAPKAPK5^ENSG00000089022.14 chr12:111892967:+ YES_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr12]"] RAB11B-AS1--RFTN1 1 0 1.00 0.00 ONLY_REF_SPLICE RAB11B-AS1^ENSG00000269386.5 chr19:8390009:- RFTN1^ENSG00000131378.14 chr3:16434037:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr3]"] RAB10--PPP1CB 1 0 1.00 0.00 ONLY_REF_SPLICE RAB10^ENSG00000084733.11 chr2:26034735:+ PPP1CB^ENSG00000213639.10 chr2:28776851:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTRACHROMOSOMAL[chr2:2.61Mb]"] RAB10--ASXL2 1 0 1.00 0.00 ONLY_REF_SPLICE RAB10^ENSG00000084733.11 chr2:26034735:+ ASXL2^ENSG00000143970.17 chr2:25771540:- YES_LDAS 0.0102 GT 1.8062 AG 1.6895 ["INTRACHROMOSOMAL[chr2:0.16Mb]"] R3HDM2--RPE 1 0 1.00 0.00 ONLY_REF_SPLICE R3HDM2^ENSG00000179912.20 chr12:57298090:- RPE^ENSG00000197713.15 chr2:210009657:+ YES_LDAS 0.0102 GT 1.3710 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr2]"] R3HDM2--PKMP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE R3HDM2^ENSG00000179912.20 chr12:57256408:- PKMP2^ENSG00000235892.1 chrX:66498901:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chrX]"] R3HDM1--RAD23B 1 0 1.00 0.00 ONLY_REF_SPLICE R3HDM1^ENSG00000048991.16 chr2:135652032:+ RAD23B^ENSG00000119318.13 chr9:107329543:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr9]"] R3HDM1--RAB3GAP1 1 0 1.00 0.00 ONLY_REF_SPLICE R3HDM1^ENSG00000048991.16 chr2:135531633:+ RAB3GAP1^ENSG00000115839.18 chr2:135113151:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["DEEPEST2019","INTRACHROMOSOMAL[chr2:0.36Mb]"] R3HDM1--ANAPC1 1 0 1.00 0.00 ONLY_REF_SPLICE R3HDM1^ENSG00000048991.16 chr2:135605016:+ ANAPC1^ENSG00000153107.13 chr2:111825855:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr2:23.65Mb]"] PXN-AS1--SEC61A2 1 0 1.00 0.00 ONLY_REF_SPLICE PXN-AS1^ENSG00000255857.6 chr12:120201426:+ SEC61A2^ENSG00000065665.21 chr10:12156907:+ YES_LDAS 0.0102 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr10]"] PUS7L--SPATS2 1 0 1.00 0.00 ONLY_REF_SPLICE PUS7L^ENSG00000129317.15 chr12:43742457:- SPATS2^ENSG00000123352.18 chr12:49441730:+ YES_LDAS 0.0102 GT 1.7465 AG 1.8295 ["INTRACHROMOSOMAL[chr12:5.61Mb]"] PUS7--EXOC4 1 0 1.00 0.00 INCL_NON_REF_SPLICE PUS7^ENSG00000091127.14 chr7:105508156:- EXOC4^ENSG00000131558.15 chr7:133288922:+ NO_LDAS 0.0102 GT 1.9899 AG 1.7968 ["INTRACHROMOSOMAL[chr7:27.73Mb]"] PUS1--WDR27 1 0 1.00 0.00 ONLY_REF_SPLICE PUS1^ENSG00000177192.14 chr12:131932312:+ WDR27^ENSG00000184465.16 chr6:169652008:- YES_LDAS 0.0102 GT 1.5850 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr6]"] PUS1--LINC01572 1 0 1.00 0.00 ONLY_REF_SPLICE PUS1^ENSG00000177192.14 chr12:131932312:+ LINC01572^ENSG00000261008.7 chr16:72349206:- YES_LDAS 0.0102 GT 1.5850 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr16]"] PTPRK--PSMG3 1 0 1.00 0.00 ONLY_REF_SPLICE PTPRK^ENSG00000152894.15 chr6:128397566:- PSMG3^ENSG00000157778.9 chr7:1569360:- NO_LDAS 0.0102 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr7]"] PTPRJ--DOCK11 1 0 1.00 0.00 ONLY_REF_SPLICE PTPRJ^ENSG00000149177.13 chr11:47981008:+ DOCK11^ENSG00000147251.16 chrX:118542725:+ YES_LDAS 0.0102 GT 1.7056 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chrX]"] PTPRE--GRHL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTPRE^ENSG00000132334.17 chr10:128076728:+ GRHL2^ENSG00000083307.12 chr8:101666979:+ NO_LDAS 0.0102 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr10--chr8]"] PTPRC--SNRNP35 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTPRC^ENSG00000081237.20 chr1:198742317:+ SNRNP35^ENSG00000184209.15 chr12:123466272:+ NO_LDAS 0.0102 GT 1.5656 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr12]"] PTPN20--VPS35 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN20^ENSG00000204179.10 chr10:46911501:+ VPS35^ENSG00000069329.18 chr16:46683606:- YES_LDAS 0.0102 GT 1.3996 AG 1.7056 ["INTERCHROMOSOMAL[chr10--chr16]"] PTPN20--BMS1P7 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTPN20^ENSG00000204179.10 chr10:46946675:+ BMS1P7^ENSG00000270025.2 chr10:48060020:- YES_LDAS 0.0102 GT 1.5628 AG 1.9899 ["INTRACHROMOSOMAL[chr10:1.05Mb]"] PTPN2--EIF4E 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN2^ENSG00000175354.20 chr18:12869025:- EIF4E^ENSG00000151247.13 chr4:98901982:- YES_LDAS 0.0102 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr18--chr4]"] PTPN18--OGDH 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN18^ENSG00000072135.13 chr2:130372483:+ OGDH^ENSG00000105953.15 chr7:44624317:+ NO_LDAS 0.0102 GT 1.4295 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr7]"] PTPN11--PRDM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTPN11^ENSG00000179295.18 chr12:112508855:+ PRDM2^ENSG00000116731.22 chr1:13781837:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr1]"] PTPN11--GTF2H3 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN11^ENSG00000179295.18 chr12:112419125:+ GTF2H3^ENSG00000111358.14 chr12:123650994:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr12:11.12Mb]"] PTMS--SLC25A25 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTMS^ENSG00000159335.18 chr12:6769674:+ SLC25A25^ENSG00000148339.12 chr9:128108664:+ NO_LDAS 0.0102 GT 1.4295 AG 0.9183 ["INTERCHROMOSOMAL[chr12--chr9]"] PTMS--AC025470.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTMS^ENSG00000159335.18 chr12:6766750:+ AC025470.2^ENSG00000250961.2 chr5:57395109:+ NO_LDAS 0.0102 GT 1.8892 AG 1.7056 ["INTERCHROMOSOMAL[chr12--chr5]"] PTGR2--TTC17 1 0 1.00 0.00 ONLY_REF_SPLICE PTGR2^ENSG00000140043.11 chr14:73874214:+ TTC17^ENSG00000052841.15 chr11:43403998:+ YES_LDAS 0.0102 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr11]"] PTGIS--ARPC4 1 0 0.14 0.00 INCL_NON_REF_SPLICE PTGIS^ENSG00000124212.6 chr20:49568114:- ARPC4^ENSG00000241553.13 chr3:9797659:+ NO_LDAS 0.0014 GC 1.6895 AG 1.7232 ["INTERCHROMOSOMAL[chr20--chr3]"] PTGES2--CXCL5 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTGES2^ENSG00000148334.16 chr9:128127439:- CXCL5^ENSG00000163735.7 chr4:73998576:- NO_LDAS 0.0102 GT 1.6895 AG 1.6729 ["INTERCHROMOSOMAL[chr9--chr4]"] PTDSS2--PHRF1 1 0 1.00 0.00 ONLY_REF_SPLICE PTDSS2^ENSG00000174915.12 chr11:450637:+ PHRF1^ENSG00000070047.13 chr11:601574:+ NO_LDAS 0.0102 GT 1.7819 AG 1.2729 ["INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[85071]"] PTCD1--POLR2J2 1 0 0.50 0.00 ONLY_REF_SPLICE PTCD1^ENSG00000106246.18 chr7:99429588:- POLR2J2^ENSG00000228049.7 chr7:102666163:- YES_LDAS 0.0051 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr7:3.23Mb]"] PTBP3--FOCAD 1 0 1.00 0.00 ONLY_REF_SPLICE PTBP3^ENSG00000119314.16 chr9:112268049:- FOCAD^ENSG00000188352.12 chr9:20764869:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8062 ["INTRACHROMOSOMAL[chr9:91.22Mb]"] PTBP3--ECPAS 1 0 1.00 0.00 ONLY_REF_SPLICE PTBP3^ENSG00000119314.16 chr9:112297841:- ECPAS^ENSG00000136813.14 chr9:111451555:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr9:0.73Mb]"] PSMG1--ZBTB21 1 0 1.00 0.00 ONLY_REF_SPLICE PSMG1^ENSG00000183527.12 chr21:39183252:- ZBTB21^ENSG00000173276.14 chr21:41994108:- YES_LDAS 0.0102 GT 1.6729 AG 1.7465 ["INTRACHROMOSOMAL[chr21:2.80Mb]"] PSME4--ZMYM4 1 0 1.00 0.00 ONLY_REF_SPLICE PSME4^ENSG00000068878.15 chr2:53904025:- ZMYM4^ENSG00000146463.12 chr1:35370029:+ NO_LDAS 0.0102 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr1]"] PSME3IP1--THAP11 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSME3IP1^ENSG00000172775.17 chr16:57178507:- THAP11^ENSG00000168286.3 chr16:67842597:+ YES_LDAS 0.0102 AT 1.5058 AC 1.8256 ["INTRACHROMOSOMAL[chr16:10.66Mb]"] PSME1--RNPEP 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSME1^ENSG00000092010.15 chr14:24137017:+ RNPEP^ENSG00000176393.11 chr1:202005917:+ NO_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr1]"] PSMD14--ELMO1 1 0 1.00 0.00 ONLY_REF_SPLICE PSMD14^ENSG00000115233.12 chr2:161318873:+ ELMO1^ENSG00000155849.16 chr7:36895017:- YES_LDAS 0.0102 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr7]"] PSMC5--GPAT2 1 0 1.00 0.00 ONLY_REF_SPLICE PSMC5^ENSG00000087191.13 chr17:63827514:+ GPAT2^ENSG00000186281.12 chr2:96024843:- YES_LDAS 0.0102 GT 1.5656 AG 1.9219 ["INTERCHROMOSOMAL[chr17--chr2]"] PSMC5--CD79B 1 0 1.00 0.00 ONLY_REF_SPLICE PSMC5^ENSG00000087191.13 chr17:63827514:+ CD79B^ENSG00000007312.13 chr17:63929888:- YES_LDAS 0.0102 GT 1.5656 AG 1.9899 ["INTRACHROMOSOMAL[chr17:0.10Mb]","LOCAL_INVERSION:+:-:[96714]"] PSMB7--CACNA1D 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSMB7^ENSG00000136930.13 chr9:124353562:- CACNA1D^ENSG00000157388.19 chr3:53803514:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr3]"] PSMB5--MRPL52 1 0 1.00 0.00 ONLY_REF_SPLICE PSMB5^ENSG00000100804.19 chr14:23033368:- MRPL52^ENSG00000172590.18 chr14:22834172:+ NO_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr14:0.18Mb]"] PSMB5--KNL1 1 0 1.00 0.00 ONLY_REF_SPLICE PSMB5^ENSG00000100804.19 chr14:23034684:- KNL1^ENSG00000137812.20 chr15:40659339:+ NO_LDAS 0.0102 GT 1.9219 AG 1.6402 ["INTERCHROMOSOMAL[chr14--chr15]"] PSMB11--U2AF2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSMB11^ENSG00000222028.5 chr14:23043080:+ U2AF2^ENSG00000063244.13 chr19:55669396:+ NO_LDAS 0.0102 GT 1.4256 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr19]"] PSMA7--CDK5RAP1 1 0 1.00 0.00 ONLY_REF_SPLICE PSMA7^ENSG00000101182.15 chr20:62143208:- CDK5RAP1^ENSG00000101391.21 chr20:33379691:- NO_LDAS 0.0102 GT 1.7819 AG 1.6895 ["INTRACHROMOSOMAL[chr20:28.74Mb]"] PSMA2--SLC25A32 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSMA2^ENSG00000106588.12 chr7:42923321:- SLC25A32^ENSG00000164933.12 chr8:103400068:- NO_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr8]"] PSKH1--TMED3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSKH1^ENSG00000159792.10 chr16:67927745:+ TMED3^ENSG00000166557.14 chr15:79426235:+ NO_LDAS 0.0102 GT 1.9219 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr15]"] PSIP1--CCDC171 1 0 1.00 0.00 ONLY_REF_SPLICE PSIP1^ENSG00000164985.15 chr9:15506561:- CCDC171^ENSG00000164989.17 chr9:15695235:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8062 ["INTRACHROMOSOMAL[chr9:0.04Mb]","LOCAL_INVERSION:-:+:[42048]"] PSEN1--ENTPD5 1 0 1.00 0.00 ONLY_REF_SPLICE PSEN1^ENSG00000080815.19 chr14:73148094:+ ENTPD5^ENSG00000187097.13 chr14:74011150:- YES_LDAS 0.0102 GT 1.9086 AG 1.5301 ["INTRACHROMOSOMAL[chr14:0.73Mb]"] PRUNE1--TRPV2 1 0 1.00 0.00 ONLY_REF_SPLICE PRUNE1^ENSG00000143363.17 chr1:151028944:+ TRPV2^ENSG00000187688.15 chr17:16433574:+ YES_LDAS 0.0102 GT 1.7056 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr17]"] PRSS55--FRMD4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRSS55^ENSG00000184647.11 chr8:10529581:+ FRMD4A^ENSG00000151474.23 chr10:13659490:- NO_LDAS 0.0102 GT 1.4256 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr10]"] PRSS53--VKORC1 1 0 1.00 0.00 ONLY_REF_SPLICE PRSS53^ENSG00000151006.7 chr16:31087537:- VKORC1^ENSG00000167397.15 chr16:31091342:- NO_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:-:[1214]"] PRSS12--WDR37 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRSS12^ENSG00000164099.3 chr4:118282045:- WDR37^ENSG00000047056.16 chr10:1080088:+ NO_LDAS 0.0102 GT 1.6729 AG 1.6895 ["INTERCHROMOSOMAL[chr4--chr10]"] PROSER1--KLC1 1 0 1.00 0.00 ONLY_REF_SPLICE PROSER1^ENSG00000120685.20 chr13:39034131:- KLC1^ENSG00000126214.21 chr14:103677415:+ NO_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr13--chr14]"] PRORP--TLR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRORP^ENSG00000100890.16 chr14:35273599:+ TLR1^ENSG00000174125.8 chr4:38805596:- YES_LDAS 0.0102 GT 1.3996 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr4]"] PRMT2--ARMC9 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRMT2^ENSG00000160310.18 chr21:46659071:+ ARMC9^ENSG00000135931.18 chr2:231226774:+ YES_LDAS 0.0102 GT 1.7819 AG 1.5329 ["INTERCHROMOSOMAL[chr21--chr2]"] PRKRIP1--EXOC1 1 0 1.00 0.00 ONLY_REF_SPLICE PRKRIP1^ENSG00000128563.13 chr7:102396537:+ EXOC1^ENSG00000090989.18 chr4:55893552:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr4]"] PRKDC--DNAJC13 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRKDC^ENSG00000253729.8 chr8:47960051:- DNAJC13^ENSG00000138246.17 chr3:132495104:+ NO_LDAS 0.0102 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr3]"] PRKD3--MAGT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRKD3^ENSG00000115825.11 chr2:37252975:- MAGT1^ENSG00000102158.20 chrX:77830895:- NO_LDAS 0.0102 GT 1.8295 AG 1.7056 ["INTERCHROMOSOMAL[chr2--chrX]"] PRKD3--GOSR1 1 0 1.00 0.00 ONLY_REF_SPLICE PRKD3^ENSG00000115825.11 chr2:37293133:- GOSR1^ENSG00000108587.16 chr17:30481143:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr17]"] PRKD2--ST6GALNAC4 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRKD2^ENSG00000105287.13 chr19:46685824:- ST6GALNAC4^ENSG00000136840.19 chr9:127912680:- NO_LDAS 0.0102 GT 1.8256 AG 1.7056 ["INTERCHROMOSOMAL[chr19--chr9]"] PRKCSH--APBB1IP 1 0 0.50 0.00 INCL_NON_REF_SPLICE PRKCSH^ENSG00000130175.10 chr19:11446350:+ APBB1IP^ENSG00000077420.16 chr10:26562033:+ NO_LDAS 0.0051 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr10]"] PRKCE--LMO4 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRKCE^ENSG00000171132.14 chr2:45976514:+ LMO4^ENSG00000143013.13 chr1:87332163:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr1]"] PRKAR1B--RNF166 1 0 1.00 0.00 ONLY_REF_SPLICE PRKAR1B^ENSG00000188191.15 chr7:596146:- RNF166^ENSG00000158717.11 chr16:88701418:- YES_LDAS 0.0102 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr16]"] PRKAR1B--PDGFA 1 0 1.00 0.00 ONLY_REF_SPLICE PRKAR1B^ENSG00000188191.15 chr7:727210:- PDGFA^ENSG00000197461.13 chr7:517490:- YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTRACHROMOSOMAL[chr7:0.03Mb]","NEIGHBORS[28901]"] PRKAR1B--HPRT1 1 0 1.00 0.00 ONLY_REF_SPLICE PRKAR1B^ENSG00000188191.15 chr7:727210:- HPRT1^ENSG00000165704.15 chrX:134473359:+ YES_LDAS 0.0102 GT 1.9086 AG 1.5656 ["INTERCHROMOSOMAL[chr7--chrX]"] PRKAA1--SERBP1 1 0 0.50 0.00 ONLY_REF_SPLICE PRKAA1^ENSG00000132356.11 chr5:40777445:- SERBP1^ENSG00000142864.15 chr1:67425223:- YES_LDAS 0.0051 GT 1.4295 AG 1.9899 ["INTERCHROMOSOMAL[chr5--chr1]"] PRIM2--LRRC1 1 0 1.00 0.00 ONLY_REF_SPLICE PRIM2^ENSG00000146143.19 chr6:57326045:+ LRRC1^ENSG00000137269.15 chr6:53842110:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8062 ["INTRACHROMOSOMAL[chr6:3.39Mb]"] PRIM2--HSF2 1 0 1.00 0.00 ONLY_REF_SPLICE PRIM2^ENSG00000146143.19 chr6:57537625:+ HSF2^ENSG00000025156.13 chr6:122412373:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr6:64.75Mb]"] PRIM1--DENND1A 1 0 1.00 0.00 ONLY_REF_SPLICE PRIM1^ENSG00000198056.15 chr12:56744065:- DENND1A^ENSG00000119522.16 chr9:123792630:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr9]"] PRH1--DSE 1 0 1.00 0.00 ONLY_REF_SPLICE PRH1^ENSG00000231887.7 chr12:11121010:- DSE^ENSG00000111817.19 chr6:116426574:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr6]"] PREP--FGFR1OP2 1 0 1.00 0.00 ONLY_REF_SPLICE PREP^ENSG00000085377.15 chr6:105397853:- FGFR1OP2^ENSG00000111790.14 chr12:26963342:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr12]"] PRDX6--MCCC2 1 0 1.00 0.00 ONLY_REF_SPLICE PRDX6^ENSG00000117592.9 chr1:173481482:+ MCCC2^ENSG00000131844.16 chr5:71641003:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr5]"] PRDX3--PRKX 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRDX3^ENSG00000165672.7 chr10:119168389:- PRKX^ENSG00000183943.6 chrX:3621283:- YES_LDAS 0.0102 GC 1.5656 AG 1.8323 ["INTERCHROMOSOMAL[chr10--chrX]"] PRDM2--TMED5 1 0 1.00 0.00 ONLY_REF_SPLICE PRDM2^ENSG00000116731.22 chr1:13742157:+ TMED5^ENSG00000117500.13 chr1:93160226:- YES_LDAS 0.0102 GT 1.5329 AG 1.8256 ["INTRACHROMOSOMAL[chr1:79.32Mb]"] PRDM10--LINC00570 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRDM10^ENSG00000170325.16 chr11:129902328:- LINC00570^ENSG00000224177.8 chr2:11402699:+ NO_LDAS 0.0102 AT 1.9086 AC 1.3996 ["INTERCHROMOSOMAL[chr11--chr2]"] PRDM10--FLI1 1 0 1.00 0.00 ONLY_REF_SPLICE PRDM10^ENSG00000170325.16 chr11:129942426:- FLI1^ENSG00000151702.17 chr11:128758115:+ YES_LDAS 0.0102 GT 1.6895 AG 1.7465 ["INTRACHROMOSOMAL[chr11:1.09Mb]"] PPWD1--OR10V1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPWD1^ENSG00000113593.12 chr5:65583219:+ OR10V1^ENSG00000172289.3 chr11:59712947:- NO_LDAS 0.0102 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr11]"] PPWD1--AATF 1 0 1.00 0.00 ONLY_REF_SPLICE PPWD1^ENSG00000113593.12 chr5:65563506:+ AATF^ENSG00000275700.6 chr17:37031614:+ YES_LDAS 0.0102 GT 1.3996 AG 1.8295 ["INTERCHROMOSOMAL[chr5--chr17]"] PPTC7--STAT5B 1 0 1.00 0.00 ONLY_REF_SPLICE PPTC7^ENSG00000196850.6 chr12:110582809:- STAT5B^ENSG00000173757.10 chr17:42232137:- NO_LDAS 0.0102 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr17]"] PPTC7--GET4 1 0 1.00 0.00 ONLY_REF_SPLICE PPTC7^ENSG00000196850.6 chr12:110582809:- GET4^ENSG00000239857.7 chr7:886056:+ YES_LDAS 0.0102 GT 1.7056 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr7]"] PPRC1--CNBP 1 0 1.00 0.00 ONLY_REF_SPLICE PPRC1^ENSG00000148840.11 chr10:102145090:+ CNBP^ENSG00000169714.17 chr3:129171771:- YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr3]"] PPP6R2--BLOC1S1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPP6R2^ENSG00000100239.16 chr22:50419462:+ BLOC1S1^ENSG00000135441.7 chr12:55719876:+ YES_LDAS 0.0102 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr22--chr12]"] PPP5C--SRP9 1 0 0.50 0.00 ONLY_REF_SPLICE PPP5C^ENSG00000011485.15 chr19:46376574:+ SRP9^ENSG00000143742.14 chr1:225783300:+ NO_LDAS 0.0051 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr1]"] PPP3R1--ZNF638 1 0 1.00 0.00 ONLY_REF_SPLICE PPP3R1^ENSG00000221823.11 chr2:68186468:- ZNF638^ENSG00000075292.19 chr2:71355719:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chr2:3.02Mb]"] PPP3CA--APBB2 1 0 1.00 0.00 ONLY_REF_SPLICE PPP3CA^ENSG00000138814.17 chr4:101346739:- APBB2^ENSG00000163697.17 chr4:40945073:- YES_LDAS 0.0102 GT 1.6895 AG 1.8256 ["INTRACHROMOSOMAL[chr4:59.81Mb]"] PPP2R5E--ZNF766 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R5E^ENSG00000154001.14 chr14:63539529:- ZNF766^ENSG00000196214.11 chr19:52282111:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9899 ["INTERCHROMOSOMAL[chr14--chr19]"] PPP2R5C--PGM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPP2R5C^ENSG00000078304.19 chr14:101917953:+ PGM2^ENSG00000169299.14 chr4:37844488:+ NO_LDAS 0.0102 GT 1.9219 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr4]"] PPP2R5C--GLCCI1 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R5C^ENSG00000078304.19 chr14:101810036:+ GLCCI1^ENSG00000106415.13 chr7:8003908:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr14--chr7]"] PPP2R5C--EAF2 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R5C^ENSG00000078304.19 chr14:101786183:+ EAF2^ENSG00000145088.9 chr3:121844453:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr3]"] PPP2R5C--AC015813.1 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R5C^ENSG00000078304.19 chr14:101810036:+ AC015813.1^ENSG00000264112.1 chr17:57989796:- YES_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr14--chr17]"] PPP2R2D--JAKMIP3 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R2D^ENSG00000175470.20 chr10:131947791:+ JAKMIP3^ENSG00000188385.12 chr10:132104672:+ YES_LDAS 0.0102 GT 1.8892 AG 1.5219 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr10:0.08Mb]","NEIGHBORS[76502]"] PPP2CA--CAMLG 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2CA^ENSG00000113575.10 chr5:134205922:- CAMLG^ENSG00000164615.6 chr5:134750759:+ YES_LDAS 0.0102 GT 1.9219 AG 1.3383 ["INTRACHROMOSOMAL[chr5:0.51Mb]"] PPP1R12C--DEDD2 1 0 1.00 0.00 ONLY_REF_SPLICE PPP1R12C^ENSG00000125503.13 chr19:55098784:- DEDD2^ENSG00000160570.14 chr19:42209840:- NO_LDAS 0.0102 GT 1.5219 AG 1.3753 ["INTRACHROMOSOMAL[chr19:12.87Mb]"] PPP1R12A--LIN7A 1 0 1.00 0.00 ONLY_REF_SPLICE PPP1R12A^ENSG00000058272.19 chr12:79872808:- LIN7A^ENSG00000111052.8 chr12:80811683:- YES_LDAS 0.0102 GT 1.8892 AG 1.4295 ["TumorFusionsNAR2018","INTRACHROMOSOMAL[chr12:0.86Mb]"] PPP1CB--MOCOS 1 0 1.00 0.00 ONLY_REF_SPLICE PPP1CB^ENSG00000213639.10 chr2:28752176:+ MOCOS^ENSG00000075643.6 chr18:36195257:+ YES_LDAS 0.0102 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr18]"] PPIL3--PUS7 1 0 1.00 0.00 ONLY_REF_SPLICE PPIL3^ENSG00000240344.9 chr2:200885698:- PUS7^ENSG00000091127.14 chr7:105457926:- YES_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr7]"] PPIL3--NOP58 1 0 1.00 0.00 ONLY_REF_SPLICE PPIL3^ENSG00000240344.9 chr2:200885698:- NOP58^ENSG00000055044.11 chr2:202292777:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr2:1.38Mb]"] PPIL2--ZNF883 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPIL2^ENSG00000100023.20 chr22:21686998:+ ZNF883^ENSG00000228623.6 chr9:112983506:- NO_LDAS 0.0102 GT 1.8892 AG 1.5628 ["INTERCHROMOSOMAL[chr22--chr9]"] PPIB--ZNF91 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPIB^ENSG00000166794.6 chr15:64162041:- ZNF91^ENSG00000167232.14 chr19:23361181:- YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr19]"] PPHLN1--PTBP3 1 0 1.00 0.00 ONLY_REF_SPLICE PPHLN1^ENSG00000134283.18 chr12:42398994:+ PTBP3^ENSG00000119314.16 chr9:112330474:- YES_LDAS 0.0102 GT 1.6402 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr9]"] PPHLN1--GXYLT1 1 0 1.00 0.00 ONLY_REF_SPLICE PPHLN1^ENSG00000134283.18 chr12:42335974:+ GXYLT1^ENSG00000151233.11 chr12:42119171:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr12:0.09Mb]","LOCAL_INVERSION:+:-:[93573]"] PPFIA1--CEPT1 1 0 1.00 0.00 ONLY_REF_SPLICE PPFIA1^ENSG00000131626.19 chr11:70362488:+ CEPT1^ENSG00000134255.14 chr1:111147642:+ YES_LDAS 0.0102 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr1]"] PPDPF--ZFP91 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPDPF^ENSG00000125534.10 chr20:63521589:+ ZFP91^ENSG00000186660.15 chr11:58579573:+ NO_LDAS 0.0102 GT 1.4256 AG 1.6895 ["INTERCHROMOSOMAL[chr20--chr11]"] PPCS--SEPTIN2 1 0 1.00 0.00 ONLY_REF_SPLICE PPCS^ENSG00000127125.9 chr1:42457350:+ SEPTIN2^ENSG00000168385.18 chr2:241342992:+ YES_LDAS 0.0102 GT 1.6895 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr2]"] PPAT--KAT6B 1 0 1.00 0.00 ONLY_REF_SPLICE PPAT^ENSG00000128059.8 chr4:56435350:- KAT6B^ENSG00000156650.14 chr10:74838683:+ YES_LDAS 0.0102 GT 1.6895 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr10]"] POTEE--VRK1 1 0 0.50 0.00 INCL_NON_REF_SPLICE POTEE^ENSG00000188219.14 chr2:131263923:+ VRK1^ENSG00000100749.9 chr14:96860710:+ YES_LDAS 0.0051 GT 1.9656 AG 1.6729 ["INTERCHROMOSOMAL[chr2--chr14]"] POP5--NPIPB5 1 0 1.00 0.00 INCL_NON_REF_SPLICE POP5^ENSG00000167272.11 chr12:120580117:- NPIPB5^ENSG00000243716.10 chr16:22507337:+ NO_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr16]"] POMK--DHTKD1 1 0 1.00 0.00 ONLY_REF_SPLICE POMK^ENSG00000185900.11 chr8:43122898:+ DHTKD1^ENSG00000181192.12 chr10:12081472:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr10]"] POM121B--POMZP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE POM121B^ENSG00000205578.6 chr7:73297129:+ POMZP3^ENSG00000146707.14 chr7:76625561:- NO_LDAS 0.0102 GC 1.2867 AG 1.7465 ["INTRACHROMOSOMAL[chr7:3.31Mb]"] POLR3D--COPE 1 0 1.00 0.00 ONLY_REF_SPLICE POLR3D^ENSG00000168495.13 chr8:22249309:+ COPE^ENSG00000105669.14 chr19:18900449:- YES_LDAS 0.0102 GT 1.5058 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr19]"] POLR3A--ZNF596 1 0 1.00 0.00 ONLY_REF_SPLICE POLR3A^ENSG00000148606.13 chr10:78017575:- ZNF596^ENSG00000172748.14 chr8:240824:+ YES_LDAS 0.0102 GT 1.9219 AG 1.6049 ["INTERCHROMOSOMAL[chr10--chr8]"] POLR2M--ZFPL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLR2M^ENSG00000255529.9 chr15:57709356:+ ZFPL1^ENSG00000162300.13 chr11:65086489:+ NO_LDAS 0.0102 GT 1.3383 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr11]"] POLR2J4--PNPLA6 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLR2J4^ENSG00000272655.2 chr7:44014606:- PNPLA6^ENSG00000032444.17 chr19:7542561:+ YES_LDAS 0.0102 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr19]"] POLR2J3--PRPF6 1 0 1.00 0.00 ONLY_REF_SPLICE POLR2J3^ENSG00000285437.1 chr7:102566997:- PRPF6^ENSG00000101161.8 chr20:64010200:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr20]"] POLR2D--TMEM140 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLR2D^ENSG00000144231.11 chr2:127847051:- TMEM140^ENSG00000146859.6 chr7:135165145:+ YES_LDAS 0.0102 GT 1.8892 AG 1.5301 ["INTERCHROMOSOMAL[chr2--chr7]"] POLR2C--AFG3L2 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLR2C^ENSG00000102978.13 chr16:57463050:+ AFG3L2^ENSG00000141385.10 chr18:12344236:- NO_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr18]"] POLR1A--ATF2 1 0 1.00 0.00 ONLY_REF_SPLICE POLR1A^ENSG00000068654.16 chr2:86098611:- ATF2^ENSG00000115966.17 chr2:175080765:- YES_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr2:88.97Mb]"] POLQ--LINC01099 1 0 1.00 0.00 ONLY_REF_SPLICE POLQ^ENSG00000051341.14 chr3:121498477:- LINC01099^ENSG00000251504.1 chr4:177903948:- NO_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr4]"] POLL--EIF5 1 0 1.00 0.00 ONLY_REF_SPLICE POLL^ENSG00000166169.17 chr10:101587246:- EIF5^ENSG00000100664.11 chr14:103340427:+ YES_LDAS 0.0102 GT 1.2729 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr14]"] POLI--ATP6V1B2 1 0 1.00 0.00 ONLY_REF_SPLICE POLI^ENSG00000101751.11 chr18:54270032:+ ATP6V1B2^ENSG00000147416.11 chr8:20214818:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr8]"] POLH--SEMA4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLH^ENSG00000170734.12 chr6:43614991:+ SEMA4A^ENSG00000196189.13 chr1:156161400:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr1]"] POLE--KANSL2 1 0 1.00 0.00 ONLY_REF_SPLICE POLE^ENSG00000177084.18 chr12:132680607:- KANSL2^ENSG00000139620.13 chr12:48661243:- YES_LDAS 0.0102 GT 1.7819 AG 1.7465 ["INTRACHROMOSOMAL[chr12:83.94Mb]"] PNP--RRBP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PNP^ENSG00000198805.12 chr14:20469583:+ RRBP1^ENSG00000125844.16 chr20:17620807:- NO_LDAS 0.0102 GT 1.6049 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr20]"] PNO1--PPP3R1 1 0 1.00 0.00 ONLY_REF_SPLICE PNO1^ENSG00000115946.8 chr2:68162663:+ PPP3R1^ENSG00000221823.11 chr2:68181010:- YES_LDAS 0.0102 GT 1.6895 AG 1.8323 ["INTRACHROMOSOMAL[chr2:0.00Mb]","LOCAL_INVERSION:+:-:[2619]"] PNKP--TRPV1 1 0 1.00 0.00 ONLY_REF_SPLICE PNKP^ENSG00000039650.12 chr19:49866399:- TRPV1^ENSG00000196689.12 chr17:3585926:- YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr17]"] PNKP--SH3D21 1 0 1.00 0.00 ONLY_REF_SPLICE PNKP^ENSG00000039650.12 chr19:49866399:- SH3D21^ENSG00000214193.11 chr1:36319071:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr1]"] PNISR--ASCC3 1 0 1.00 0.00 ONLY_REF_SPLICE PNISR^ENSG00000132424.17 chr6:99404603:- ASCC3^ENSG00000112249.14 chr6:100638821:- YES_LDAS 0.0102 GT 1.4566 AG 1.8892 ["INTRACHROMOSOMAL[chr6:1.08Mb]"] PMS1--DOCK10 1 0 1.00 0.00 ONLY_REF_SPLICE PMS1^ENSG00000064933.18 chr2:189818180:+ DOCK10^ENSG00000135905.20 chr2:224840072:- YES_LDAS 0.0102 GT 1.8323 AG 1.7819 ["INTRACHROMOSOMAL[chr2:34.89Mb]"] PMF1--PGLS 1 0 1.00 0.00 ONLY_REF_SPLICE PMF1^ENSG00000160783.19 chr1:156213176:+ PGLS^ENSG00000130313.7 chr19:17520944:+ YES_LDAS 0.0102 GT 1.5628 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr19]"] PM20D2--SERF1A 1 0 0.50 0.00 ONLY_REF_SPLICE PM20D2^ENSG00000146281.6 chr6:89153185:+ SERF1A^ENSG00000172058.16 chr5:70901825:+ YES_LDAS 0.0051 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr5]"] PLXDC2--PIP4K2A 1 0 1.00 0.00 ONLY_REF_SPLICE PLXDC2^ENSG00000120594.17 chr10:19817191:+ PIP4K2A^ENSG00000150867.14 chr10:22591781:- YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr10:2.24Mb]"] PLXDC2--BIN2P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLXDC2^ENSG00000120594.17 chr10:20047019:+ BIN2P1^ENSG00000234568.3 chr4:82275775:+ NO_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr4]"] PLPBP--TUBE1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37779571:+ TUBE1^ENSG00000074935.14 chr6:112076366:- NO_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr6]"] PLPBP--TIMM23B 1 0 0.33 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ TIMM23B^ENSG00000204152.14 chr10:49973012:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr10]"] PLPBP--SRSF1 1 0 1.00 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ SRSF1^ENSG00000136450.13 chr17:58005041:- YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr17]"] PLPBP--RPS27L 1 0 1.00 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ RPS27L^ENSG00000185088.14 chr15:63154060:- YES_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr8--chr15]"] PLPBP--PIEZO2 1 0 1.00 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ PIEZO2^ENSG00000154864.13 chr18:10718259:- YES_LDAS 0.0102 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr8--chr18]"] PLPBP--EZH2 1 0 1.00 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ EZH2^ENSG00000106462.11 chr7:148819687:- NO_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr8--chr7]"] PLPBP--AC022400.4 1 0 0.33 0.00 INCL_NON_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ AC022400.4^ENSG00000272140.2 chr10:73713332:- NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr10]"] PLOD1--VPS13D 1 0 1.00 0.00 ONLY_REF_SPLICE PLOD1^ENSG00000083444.17 chr1:11934855:+ VPS13D^ENSG00000048707.15 chr1:12268706:+ NO_LDAS 0.0102 GT 1.5656 AG 1.9899 ["INTRACHROMOSOMAL[chr1:0.25Mb]"] PLEKHA3--TJP2 1 0 0.50 0.00 INCL_NON_REF_SPLICE PLEKHA3^ENSG00000116095.11 chr2:178480880:+ TJP2^ENSG00000119139.21 chr9:69248019:+ YES_LDAS 0.0051 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr9]"] PLEK--AC243829.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLEK^ENSG00000115956.10 chr2:68388099:+ AC243829.4^ENSG00000277089.4 chr17:36089183:+ NO_LDAS 0.0102 AT 1.8892 AC 1.9656 ["INTERCHROMOSOMAL[chr2--chr17]"] PLD4--LZTS2 1 0 1.00 0.00 ONLY_REF_SPLICE PLD4^ENSG00000166428.14 chr14:104932355:+ LZTS2^ENSG00000107816.17 chr10:101002497:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr14--chr10]"] PLD4--CSNK1G2 1 0 1.00 0.00 ONLY_REF_SPLICE PLD4^ENSG00000166428.14 chr14:104932355:+ CSNK1G2^ENSG00000133275.16 chr19:1969508:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr19]"] PLBD2--AC010980.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLBD2^ENSG00000151176.8 chr12:113384946:+ AC010980.1^ENSG00000288658.1 chr2:222320015:- NO_LDAS 0.0102 GT 1.8892 AG 1.4295 ["INTERCHROMOSOMAL[chr12--chr2]"] PLAGL2--NFATC2 1 0 1.00 0.00 ONLY_REF_SPLICE PLAGL2^ENSG00000126003.7 chr20:32201919:- NFATC2^ENSG00000101096.20 chr20:51454688:- YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr20:19.18Mb]"] PKN2--SIPA1L1 1 0 1.00 0.00 ONLY_REF_SPLICE PKN2^ENSG00000065243.20 chr1:88760376:+ SIPA1L1^ENSG00000197555.9 chr14:71587571:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr14]"] PKHD1L1--SPAG9 1 0 1.00 0.00 ONLY_REF_SPLICE PKHD1L1^ENSG00000205038.12 chr8:109527020:+ SPAG9^ENSG00000008294.21 chr17:51001845:- YES_LDAS 0.0102 GT 1.5628 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr17]"] PKHD1L1--RIMS2 1 0 1.00 0.00 ONLY_REF_SPLICE PKHD1L1^ENSG00000205038.12 chr8:109527020:+ RIMS2^ENSG00000176406.23 chr8:103809280:+ YES_LDAS 0.0102 GT 1.5628 AG 1.9329 ["INTRACHROMOSOMAL[chr8:5.11Mb]"] PKD2--LHFPL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PKD2^ENSG00000118762.8 chr4:88008328:+ LHFPL2^ENSG00000145685.14 chr5:78510048:- YES_LDAS 0.0102 GT 1.7465 AG 1.0530 ["INTERCHROMOSOMAL[chr4--chr5]"] PJA2--PARP8 1 0 1.00 0.00 ONLY_REF_SPLICE PJA2^ENSG00000198961.10 chr5:109409842:- PARP8^ENSG00000151883.19 chr5:50778069:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr5:58.49Mb]"] PIP5K1A--PIP5K1C 1 0 1.00 0.00 ONLY_REF_SPLICE PIP5K1A^ENSG00000143398.20 chr1:151240039:+ PIP5K1C^ENSG00000186111.11 chr19:3653589:- NO_LDAS 0.0102 GT 1.9086 AG 1.5628 ["INTERCHROMOSOMAL[chr1--chr19]"] PIP5K1A--PI4KB 1 0 1.00 0.00 ONLY_REF_SPLICE PIP5K1A^ENSG00000143398.20 chr1:151199081:+ PI4KB^ENSG00000143393.16 chr1:151316509:- YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.04Mb]","LOCAL_INVERSION:+:-:[42261]"] PINX1--DPH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PINX1^ENSG00000254093.9 chr8:10765237:- DPH1^ENSG00000108963.19 chr17:2030198:+ NO_LDAS 0.0102 GT 1.4566 AG 1.3996 ["INTERCHROMOSOMAL[chr8--chr17]"] PIN1--AL391056.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIN1^ENSG00000127445.14 chr19:9848140:+ AL391056.1^ENSG00000227619.3 chr9:129575398:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr9]"] PIK3R6--SHANK2 1 0 1.00 0.00 ONLY_REF_SPLICE PIK3R6^ENSG00000276231.5 chr17:8838564:- SHANK2^ENSG00000162105.20 chr11:70487720:- YES_LDAS 0.0102 GT 1.5628 AG 1.5329 ["INTERCHROMOSOMAL[chr17--chr11]"] PIK3R3--ZFAT 1 0 1.00 0.00 ONLY_REF_SPLICE PIK3R3^ENSG00000117461.15 chr1:46131847:- ZFAT^ENSG00000066827.16 chr8:134565421:- YES_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr8]"] PIK3CB--METAP1 1 0 1.00 0.00 ONLY_REF_SPLICE PIK3CB^ENSG00000051382.9 chr3:138755754:- METAP1^ENSG00000164024.12 chr4:99039374:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr4]"] PIH1D1--WASF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIH1D1^ENSG00000104872.11 chr19:49447338:- WASF3^ENSG00000132970.14 chr13:26687521:+ NO_LDAS 0.0102 GT 1.7968 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr13]"] PIGX--RIF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIGX^ENSG00000163964.18 chr3:196733815:+ RIF1^ENSG00000080345.18 chr2:151445338:+ YES_LDAS 0.0102 GT 1.8256 AG 1.7232 ["INTERCHROMOSOMAL[chr3--chr2]"] PIGU--OXCT1 1 0 1.00 0.00 ONLY_REF_SPLICE PIGU^ENSG00000101464.11 chr20:34616042:- OXCT1^ENSG00000083720.13 chr5:41862750:- YES_LDAS 0.0102 GT 1.6895 AG 1.6895 ["INTERCHROMOSOMAL[chr20--chr5]"] PIGT--MCM8 1 0 1.00 0.00 ONLY_REF_SPLICE PIGT^ENSG00000124155.18 chr20:45416694:+ MCM8^ENSG00000125885.13 chr20:5958528:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr20:39.42Mb]"] PIGF--ACADM 1 0 1.00 0.00 ONLY_REF_SPLICE PIGF^ENSG00000151665.13 chr2:46616970:- ACADM^ENSG00000117054.15 chr1:75739980:+ YES_LDAS 0.0102 GT 1.3383 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr1]"] PIEZO2--ZFYVE16 1 0 1.00 0.00 ONLY_REF_SPLICE PIEZO2^ENSG00000154864.13 chr18:10979535:- ZFYVE16^ENSG00000039319.17 chr5:80434109:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7232 ["INTERCHROMOSOMAL[chr18--chr5]"] PIEZO2--PIK3R3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIEZO2^ENSG00000154864.13 chr18:10871359:- PIK3R3^ENSG00000117461.15 chr1:46077606:- YES_LDAS 0.0102 GT 1.9899 AG 1.7465 ["INTERCHROMOSOMAL[chr18--chr1]"] PIEZO2--HOOK3 1 0 1.00 0.00 ONLY_REF_SPLICE PIEZO2^ENSG00000154864.13 chr18:11066127:- HOOK3^ENSG00000168172.9 chr8:42906173:+ YES_LDAS 0.0102 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr18--chr8]"] PIDD1--ALDH5A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIDD1^ENSG00000177595.18 chr11:804104:- ALDH5A1^ENSG00000112294.14 chr6:24533978:+ NO_LDAS 0.0102 GT 1.4566 AG 1.7232 ["INTERCHROMOSOMAL[chr11--chr6]"] PICALM--KLHL5 1 0 1.00 0.00 ONLY_REF_SPLICE PICALM^ENSG00000073921.18 chr11:86068651:- KLHL5^ENSG00000109790.17 chr4:39075965:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr4]"] PIAS2--KATNAL2 1 0 1.00 0.00 ONLY_REF_SPLICE PIAS2^ENSG00000078043.16 chr18:46890580:- KATNAL2^ENSG00000167216.17 chr18:46946057:+ YES_LDAS 0.0102 GT 1.9899 AG 1.8062 ["INTRACHROMOSOMAL[chr18:0.00Mb]","NEIGHBORS_OVERLAP:-:+:[2668]"] PI4KA--TNXA 1 0 0.17 0.00 INCL_NON_REF_SPLICE PI4KA^ENSG00000241973.11 chr22:20734422:- TNXA^ENSG00000248290.1 chr6:32010311:- NO_LDAS 0.0017 GT 1.6049 AG 1.5546 ["INTERCHROMOSOMAL[chr22--chr6]"] PHRF1--KLF16 1 0 1.00 0.00 ONLY_REF_SPLICE PHRF1^ENSG00000070047.13 chr11:611082:+ KLF16^ENSG00000129911.9 chr19:1854760:- YES_LDAS 0.0102 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr19]"] PHRF1--IL4I1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHRF1^ENSG00000070047.13 chr11:608431:+ IL4I1^ENSG00000104951.16 chr19:49890347:- YES_LDAS 0.0102 GT 1.5546 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr19]"] PHOSPHO1--CREM 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHOSPHO1^ENSG00000173868.12 chr17:49223921:- CREM^ENSG00000095794.19 chr10:35206924:+ NO_LDAS 0.0102 GT 1.2729 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr10]"] PHLPP1--SYMPK 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHLPP1^ENSG00000081913.14 chr18:62941839:+ SYMPK^ENSG00000125755.19 chr19:45823472:- NO_LDAS 0.0102 GT 1.8323 AG 1.4256 ["INTERCHROMOSOMAL[chr18--chr19]"] PHLDB2--SOS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHLDB2^ENSG00000144824.21 chr3:111939594:+ SOS2^ENSG00000100485.12 chr14:50129998:- NO_LDAS 0.0102 GT 1.9656 AG 1.9329 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chr14]"] PHKB--NID1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHKB^ENSG00000102893.16 chr16:47660880:+ NID1^ENSG00000116962.15 chr1:235993756:- YES_LDAS 0.0102 AT 1.8256 AC 1.6895 ["INTERCHROMOSOMAL[chr16--chr1]"] PHIP--C16orf72 1 0 1.00 0.00 ONLY_REF_SPLICE PHIP^ENSG00000146247.14 chr6:79077448:- C16orf72^ENSG00000182831.12 chr16:9116668:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr16]"] PHIP--AFDN-DT 1 0 1.00 0.00 ONLY_REF_SPLICE PHIP^ENSG00000146247.14 chr6:79077448:- AFDN-DT^ENSG00000198221.10 chr6:167824806:- YES_LDAS 0.0102 GT 1.9086 AG 1.5656 ["INTRACHROMOSOMAL[chr6:88.74Mb]"] PHF3--CHERP 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHF3^ENSG00000118482.12 chr6:63636677:+ CHERP^ENSG00000085872.15 chr19:16529810:- NO_LDAS 0.0102 GT 1.5656 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr19]"] PHF21A--MTMR3 1 0 1.00 0.00 ONLY_REF_SPLICE PHF21A^ENSG00000135365.16 chr11:45949402:- MTMR3^ENSG00000100330.16 chr22:30022609:+ NO_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr22]"] PHF20L1--CNOT1 1 0 1.00 0.00 ONLY_REF_SPLICE PHF20L1^ENSG00000129292.21 chr8:132799172:+ CNOT1^ENSG00000125107.19 chr16:58525359:- YES_LDAS 0.0102 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr16]"] PHF19--NOP53 1 0 1.00 0.00 ONLY_REF_SPLICE PHF19^ENSG00000119403.15 chr9:120866028:- NOP53^ENSG00000105373.19 chr19:47756528:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr9--chr19]"] PHF1--SALL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHF1^ENSG00000112511.18 chr6:33414062:+ SALL1^ENSG00000103449.12 chr16:51143257:- NO_LDAS 0.0102 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr16]"] PHC3--FNDC3B 1 0 1.00 0.00 ONLY_REF_SPLICE PHC3^ENSG00000173889.16 chr3:170171373:- FNDC3B^ENSG00000075420.13 chr3:172112452:+ NO_LDAS 0.0102 GT 1.9329 AG 1.7968 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr3:1.86Mb]"] PGR--TMEM131 1 0 1.00 0.00 INCL_NON_REF_SPLICE PGR^ENSG00000082175.15 chr11:101127730:- TMEM131^ENSG00000075568.17 chr2:97792593:- NO_LDAS 0.0102 GT 1.7232 AG 1.5058 ["INTERCHROMOSOMAL[chr11--chr2]"] PGPEP1--LSM4 1 0 1.00 0.00 ONLY_REF_SPLICE PGPEP1^ENSG00000130517.14 chr19:18356011:+ LSM4^ENSG00000130520.11 chr19:18316065:- YES_LDAS 0.0102 GT 1.7819 AG 1.7056 ["INTRACHROMOSOMAL[chr19:0.02Mb]","LOCAL_INVERSION:+:-:[17486]"] PGK1--LY86 1 0 1.00 0.00 INCL_NON_REF_SPLICE PGK1^ENSG00000102144.15 chrX:78104329:+ LY86^ENSG00000112799.9 chr6:6649630:+ YES_LDAS 0.0102 GT 1.4716 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr6]"] PEX7--MAP3K5 1 0 1.00 0.00 ONLY_REF_SPLICE PEX7^ENSG00000112357.14 chr6:136826469:+ MAP3K5^ENSG00000197442.10 chr6:136583740:- YES_LDAS 0.0102 GT 1.8256 AG 1.7465 ["INTRACHROMOSOMAL[chr6:0.03Mb]","LOCAL_INVERSION:+:-:[30087]"] PEX6--PSME4 1 0 1.00 0.00 ONLY_REF_SPLICE PEX6^ENSG00000124587.14 chr6:42978269:- PSME4^ENSG00000068878.15 chr2:53885775:- NO_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr2]"] PELI1--AFTPH 1 0 1.00 0.00 ONLY_REF_SPLICE PELI1^ENSG00000197329.12 chr2:64144081:- AFTPH^ENSG00000119844.15 chr2:64551443:+ YES_LDAS 0.0102 GT 1.9656 AG 1.4295 ["INTRACHROMOSOMAL[chr2:0.38Mb]"] PEAK1--TIAL1 1 0 1.00 0.00 ONLY_REF_SPLICE PEAK1^ENSG00000173517.10 chr15:77365163:- TIAL1^ENSG00000151923.18 chr10:119588248:- YES_LDAS 0.0102 GT 1.5546 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr10]"] PDZD11--SEC61A1 1 0 1.00 0.00 ONLY_REF_SPLICE PDZD11^ENSG00000120509.11 chrX:70289255:- SEC61A1^ENSG00000058262.10 chr3:128066954:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr3]"] PDXDC1--PPIA 1 0 0.50 0.00 ONLY_REF_SPLICE PDXDC1^ENSG00000179889.19 chr16:15030056:+ PPIA^ENSG00000196262.15 chr7:44801287:+ YES_LDAS 0.0051 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr7]"] PDLIM7--GRK6 1 0 1.00 0.00 ONLY_REF_SPLICE PDLIM7^ENSG00000196923.14 chr5:177492405:- GRK6^ENSG00000198055.11 chr5:177441737:+ NO_LDAS 0.0102 GT 1.5301 AG 1.9329 ["INTRACHROMOSOMAL[chr5:0.04Mb]","LOCAL_INVERSION:-:+:[40493]"] PDK1--PCF11 1 0 1.00 0.00 ONLY_REF_SPLICE PDK1^ENSG00000152256.14 chr2:172570824:+ PCF11^ENSG00000165494.11 chr11:83161327:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr11]"] PDE8A--AKAP13 1 0 1.00 0.00 ONLY_REF_SPLICE PDE8A^ENSG00000073417.15 chr15:84982348:+ AKAP13^ENSG00000170776.22 chr15:85521428:+ YES_LDAS 0.0102 GT 1.5058 AG 1.2729 ["ChimerPub","INTRACHROMOSOMAL[chr15:0.24Mb]"] PDE7A--FGFR1 1 0 1.00 0.00 ONLY_REF_SPLICE PDE7A^ENSG00000205268.11 chr8:65841371:- FGFR1^ENSG00000077782.21 chr8:38457534:- YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr8:27.25Mb]"] PDE11A--ACAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDE11A^ENSG00000128655.18 chr2:178072161:- ACAP1^ENSG00000072818.12 chr17:7350971:+ NO_LDAS 0.0102 GT 1.6402 AG 1.6729 ["INTERCHROMOSOMAL[chr2--chr17]"] PDCD4--SRP9 1 0 0.50 0.00 INCL_NON_REF_SPLICE PDCD4^ENSG00000150593.18 chr10:110875989:+ SRP9^ENSG00000143742.14 chr1:225777935:+ YES_LDAS 0.0051 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr1]"] PCSK7--SPATA32 1 0 0.50 0.00 INCL_NON_REF_SPLICE PCSK7^ENSG00000160613.14 chr11:117218462:- SPATA32^ENSG00000184361.13 chr17:45255420:- NO_LDAS 0.0051 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr17]"] PCSK7--PHF20L1 1 0 0.50 0.00 INCL_NON_REF_SPLICE PCSK7^ENSG00000160613.14 chr11:117218462:- PHF20L1^ENSG00000129292.21 chr8:132844287:+ NO_LDAS 0.0051 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr8]"] PCNX1--DCAF5 1 0 1.00 0.00 ONLY_REF_SPLICE PCNX1^ENSG00000100731.16 chr14:71057724:+ DCAF5^ENSG00000139990.18 chr14:69062511:- YES_LDAS 0.0102 GT 1.9329 AG 1.6402 ["INTRACHROMOSOMAL[chr14:1.75Mb]"] PCMTD1--SPIDR 1 0 1.00 0.00 ONLY_REF_SPLICE PCMTD1^ENSG00000168300.14 chr8:51845661:- SPIDR^ENSG00000164808.17 chr8:47440323:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8256 ["INTRACHROMOSOMAL[chr8:4.08Mb]"] PCMTD1--HBS1L 1 0 1.00 0.00 ONLY_REF_SPLICE PCMTD1^ENSG00000168300.14 chr8:51845661:- HBS1L^ENSG00000112339.15 chr6:135002842:- YES_LDAS 0.0102 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr6]"] PCLAF--CCT8 1 0 1.00 0.00 ONLY_REF_SPLICE PCLAF^ENSG00000166803.14 chr15:64376743:- CCT8^ENSG00000156261.13 chr21:29056552:- YES_LDAS 0.0102 GT 1.0530 AG 1.8295 ["INTERCHROMOSOMAL[chr15--chr21]"] PCIF1--ARFGAP1 1 0 1.00 0.00 ONLY_REF_SPLICE PCIF1^ENSG00000100982.12 chr20:45939339:+ ARFGAP1^ENSG00000101199.13 chr20:63284866:+ YES_LDAS 0.0102 GT 1.9899 AG 1.6895 ["INTRACHROMOSOMAL[chr20:17.32Mb]"] PCGF3--VDAC1P2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCGF3^ENSG00000185619.18 chr4:705970:+ VDAC1P2^ENSG00000213856.3 chrX:49633355:- YES_LDAS 0.0102 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chrX]"] PBX3--MAPKAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PBX3^ENSG00000167081.18 chr9:125748623:+ MAPKAP1^ENSG00000119487.17 chr9:125672459:- YES_LDAS 0.0102 GT 1.5546 AG 1.9329 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr9:0.04Mb]","LOCAL_INVERSION:+:-:[40111]"] PAXIP1-DT--KLC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PAXIP1-DT^ENSG00000273344.1 chr7:155004043:+ KLC2^ENSG00000174996.12 chr11:66261796:+ YES_LDAS 0.0102 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr11]"] PARVB--PTGES2 1 0 1.00 0.00 ONLY_REF_SPLICE PARVB^ENSG00000188677.15 chr22:44024451:+ PTGES2^ENSG00000148334.16 chr9:128125441:- YES_LDAS 0.0102 GT 1.2419 AG 1.6402 ["INTERCHROMOSOMAL[chr22--chr9]"] PARVB--KCNN3 1 0 1.00 0.00 ONLY_REF_SPLICE PARVB^ENSG00000188677.15 chr22:44026376:+ KCNN3^ENSG00000143603.19 chr1:154822184:- YES_LDAS 0.0102 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr1]"] PARP14--SUZ12P1 1 0 1.00 0.00 ONLY_REF_SPLICE PARP14^ENSG00000173193.15 chr3:122720388:+ SUZ12P1^ENSG00000264538.6 chr17:30759491:+ YES_LDAS 0.0102 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr17]"] PARP10--CTSS 1 0 1.00 0.00 INCL_NON_REF_SPLICE PARP10^ENSG00000178685.14 chr8:143985559:- CTSS^ENSG00000163131.12 chr1:150765733:- YES_LDAS 0.0102 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr1]"] PARP1--RN7SL49P 1 0 1.00 0.00 INCL_NON_REF_SPLICE PARP1^ENSG00000143799.14 chr1:226372598:- RN7SL49P^ENSG00000265802.2 chr13:45002205:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr13]"] PARN--MRTFB 1 0 1.00 0.00 ONLY_REF_SPLICE PARN^ENSG00000140694.17 chr16:14552021:- MRTFB^ENSG00000186260.17 chr16:14079290:+ YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.17Mb]"] PARD3--CREM 1 0 1.00 0.00 ONLY_REF_SPLICE PARD3^ENSG00000148498.16 chr10:34814876:- CREM^ENSG00000095794.19 chr10:35206895:+ NO_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr10:0.31Mb]"] PANX1--SOX5 1 0 1.00 0.00 ONLY_REF_SPLICE PANX1^ENSG00000110218.9 chr11:94129493:+ SOX5^ENSG00000134532.19 chr12:23896024:- YES_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr11--chr12]"] PAM16--PTOV1-AS2 1 0 1.00 0.00 ONLY_REF_SPLICE PAM16^ENSG00000217930.8 chr16:4351232:- PTOV1-AS2^ENSG00000269352.1 chr19:49858427:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr19]"] PALM2AKAP2--UBE2E1 1 0 1.00 0.00 ONLY_REF_SPLICE PALM2AKAP2^ENSG00000157654.19 chr9:110048855:+ UBE2E1^ENSG00000170142.12 chr3:23811460:+ YES_LDAS 0.0102 GT 1.5058 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr3]"] PAK2--PIGX 1 0 1.00 0.00 ONLY_REF_SPLICE PAK2^ENSG00000180370.10 chr3:196802027:+ PIGX^ENSG00000163964.18 chr3:196733759:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5656 ["DEEPEST2019","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:+:[3850]"] PAICS--TRIP12 1 0 1.00 0.00 ONLY_REF_SPLICE PAICS^ENSG00000128050.9 chr4:56450702:+ TRIP12^ENSG00000153827.14 chr2:229771632:- NO_LDAS 0.0102 GT 1.5628 AG 1.7968 ["INTERCHROMOSOMAL[chr4--chr2]"] PAICS--HSPBAP1 1 0 1.00 0.00 ONLY_REF_SPLICE PAICS^ENSG00000128050.9 chr4:56453761:+ HSPBAP1^ENSG00000169087.11 chr3:122741113:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr3]"] PACSIN2--SBNO1 1 0 1.00 0.00 ONLY_REF_SPLICE PACSIN2^ENSG00000100266.19 chr22:43015021:- SBNO1^ENSG00000139697.14 chr12:123350441:- YES_LDAS 0.0102 GT 1.7232 AG 1.7232 ["INTERCHROMOSOMAL[chr22--chr12]"] P2RY8--SUPT6H 1 0 1.00 0.00 ONLY_REF_SPLICE P2RY8^ENSG00000182162.11 chrX:1536921:- SUPT6H^ENSG00000109111.15 chr17:28673371:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chrX--chr17]"] P2RY8--PRPS1 1 0 1.00 0.00 ONLY_REF_SPLICE P2RY8^ENSG00000182162.11 chrX:1536921:- PRPS1^ENSG00000147224.13 chrX:107639295:+ YES_LDAS 0.0102 GT 1.9329 AG 1.5656 ["INTRACHROMOSOMAL[chrX:106.09Mb]"] P2RY8--NSRP1 1 0 1.00 0.00 ONLY_REF_SPLICE P2RY8^ENSG00000182162.11 chrX:1536921:- NSRP1^ENSG00000126653.18 chr17:30172542:+ NO_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chrX--chr17]"] P2RY8--DMD 1 0 1.00 0.00 ONLY_REF_SPLICE P2RY8^ENSG00000182162.11 chrX:1536921:- DMD^ENSG00000198947.17 chrX:31261016:- YES_LDAS 0.0102 GT 1.9329 AG 1.7056 ["INTRACHROMOSOMAL[chrX:29.56Mb]"] OXSR1--MARCHF8 1 0 1.00 0.00 ONLY_REF_SPLICE OXSR1^ENSG00000172939.9 chr3:38165946:+ MARCHF8^ENSG00000165406.16 chr10:45533289:- NO_LDAS 0.0102 GT 1.8295 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr10]"] OXR1--PVT1 1 0 1.00 0.00 ONLY_REF_SPLICE OXR1^ENSG00000164830.19 chr8:106658185:+ PVT1^ENSG00000249859.12 chr8:128096518:+ NO_LDAS 0.0102 GT 1.6895 AG 1.6402 ["INTRACHROMOSOMAL[chr8:21.04Mb]"] OXCT1-AS1--CACTIN 1 0 1.00 0.00 INCL_NON_REF_SPLICE OXCT1-AS1^ENSG00000248668.3 chr5:41870413:+ CACTIN^ENSG00000105298.14 chr19:3623918:- YES_LDAS 0.0102 GT 1.8062 AG 1.8062 ["INTERCHROMOSOMAL[chr5--chr19]"] OTULIN--AC025174.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE OTULIN^ENSG00000154124.5 chr5:14664977:+ AC025174.1^ENSG00000251168.1 chr5:7924233:+ YES_LDAS 0.0102 GT 1.7056 AG 1.8892 ["INTRACHROMOSOMAL[chr5:6.74Mb]"] OTUD5--JADE3 1 0 1.00 0.00 ONLY_REF_SPLICE OTUD5^ENSG00000068308.14 chrX:48944190:- JADE3^ENSG00000102221.14 chrX:46984884:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chrX:1.86Mb]"] OTUD4--TRA2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE OTUD4^ENSG00000164164.17 chr4:145134908:- TRA2B^ENSG00000136527.18 chr3:185925560:- NO_LDAS 0.0102 GT 1.5546 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr3]"] ORAI1--USP8 1 0 1.00 0.00 ONLY_REF_SPLICE ORAI1^ENSG00000276045.3 chr12:121627050:+ USP8^ENSG00000138592.14 chr15:50471633:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr15]"] OR4T1P--MED13L 1 0 1.00 0.00 INCL_NON_REF_SPLICE OR4T1P^ENSG00000258641.1 chr14:20093752:+ MED13L^ENSG00000123066.9 chr12:116111512:- NO_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr12]"] OPRD1--IFI27L2 1 0 1.00 0.00 INCL_NON_REF_SPLICE OPRD1^ENSG00000116329.11 chr1:28859153:+ IFI27L2^ENSG00000119632.4 chr14:94129291:- NO_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr14]"] OPA3--GNAI3 1 0 0.50 0.00 ONLY_REF_SPLICE OPA3^ENSG00000125741.5 chr19:45584623:- GNAI3^ENSG00000065135.12 chr1:109573737:+ YES_LDAS 0.0051 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] OGG1--NUP107 1 0 1.00 0.00 ONLY_REF_SPLICE OGG1^ENSG00000114026.22 chr3:9750423:+ NUP107^ENSG00000111581.10 chr12:68715627:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr12]"] OGG1--JMJD6 1 0 1.00 0.00 INCL_NON_REF_SPLICE OGG1^ENSG00000114026.22 chr3:9751957:+ JMJD6^ENSG00000070495.15 chr17:76718860:- YES_LDAS 0.0102 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr17]"] OGG1--FANCD2 1 0 1.00 0.00 ONLY_REF_SPLICE OGG1^ENSG00000114026.22 chr3:9750423:+ FANCD2^ENSG00000144554.12 chr3:10041623:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.24Mb]"] OGFOD2--SYNPO 1 0 1.00 0.00 INCL_NON_REF_SPLICE OGFOD2^ENSG00000111325.16 chr12:122976767:+ SYNPO^ENSG00000171992.13 chr5:150659171:+ NO_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr5]"] OBSCN--ACAP2 1 0 1.00 0.00 ONLY_REF_SPLICE OBSCN^ENSG00000154358.23 chr1:228282205:+ ACAP2^ENSG00000114331.15 chr3:195345317:- YES_LDAS 0.0102 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr3]"] OBI1--GAS7 1 0 1.00 0.00 ONLY_REF_SPLICE OBI1^ENSG00000152193.8 chr13:78659049:- GAS7^ENSG00000007237.19 chr17:10019897:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr13--chr17]"] OAS2--NSUN2 1 0 1.00 0.00 INCL_NON_REF_SPLICE OAS2^ENSG00000111335.14 chr12:113009234:+ NSUN2^ENSG00000037474.15 chr5:6632640:- YES_LDAS 0.0102 GT 1.8892 AG 1.5628 ["INTERCHROMOSOMAL[chr12--chr5]"] OAS2--GIT2 1 0 1.00 0.00 ONLY_REF_SPLICE OAS2^ENSG00000111335.14 chr12:113007943:+ GIT2^ENSG00000139436.21 chr12:109934085:- YES_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr12:2.98Mb]"] NUSAP1--SKA3 1 0 1.00 0.00 ONLY_REF_SPLICE NUSAP1^ENSG00000137804.14 chr15:41342454:+ SKA3^ENSG00000165480.16 chr13:21155811:- YES_LDAS 0.0102 GT 1.6895 AG 1.5219 ["INTERCHROMOSOMAL[chr15--chr13]"] NUP98--CCDC50 1 0 1.00 0.00 ONLY_REF_SPLICE NUP98^ENSG00000110713.17 chr11:3712564:- CCDC50^ENSG00000152492.15 chr3:191357088:+ YES_LDAS 0.0102 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr3]"] NUP98--AC063979.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NUP98^ENSG00000110713.17 chr11:3762902:- AC063979.1^ENSG00000251613.4 chr5:72687469:- NO_LDAS 0.0102 GT 1.4295 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr5]"] NUP88--PEX2 1 0 1.00 0.00 ONLY_REF_SPLICE NUP88^ENSG00000108559.12 chr17:5386708:- PEX2^ENSG00000164751.15 chr8:77000132:- YES_LDAS 0.0102 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr8]"] NUP37--ITPRIPL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NUP37^ENSG00000075188.9 chr12:102077472:- ITPRIPL1^ENSG00000198885.10 chr2:96327657:+ YES_LDAS 0.0102 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr12--chr2]"] NUP155--HMGCS1 1 0 1.00 0.00 ONLY_REF_SPLICE NUP155^ENSG00000113569.16 chr5:37292879:- HMGCS1^ENSG00000112972.15 chr5:43298975:- YES_LDAS 0.0102 GT 1.5219 AG 1.6895 ["INTRACHROMOSOMAL[chr5:5.92Mb]"] NUFIP1--LMO7 1 0 1.00 0.00 INCL_NON_REF_SPLICE NUFIP1^ENSG00000083635.8 chr13:44989025:- LMO7^ENSG00000136153.20 chr13:75621763:+ YES_LDAS 0.0102 GT 1.8295 AG 1.7819 ["INTRACHROMOSOMAL[chr13:30.63Mb]"] NUDT18--NEDD4L 1 0 1.00 0.00 ONLY_REF_SPLICE NUDT18^ENSG00000275074.2 chr8:22108133:- NEDD4L^ENSG00000049759.20 chr18:58165788:+ YES_LDAS 0.0102 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr18]"] NUBPL--PTPN1 1 0 1.00 0.00 ONLY_REF_SPLICE NUBPL^ENSG00000151413.17 chr14:31673574:+ PTPN1^ENSG00000196396.10 chr20:50561363:+ NO_LDAS 0.0102 GT 1.8256 AG 1.9219 ["INTERCHROMOSOMAL[chr14--chr20]"] NTRK1--TFG 1 0 1.00 0.00 INCL_NON_REF_SPLICE NTRK1^ENSG00000198400.13 chr1:156874978:+ TFG^ENSG00000114354.15 chr3:100719986:+ YES_LDAS 0.0102 GT 1.9086 TT 1.5628 ["ChimerKB","INTERCHROMOSOMAL[chr1--chr3]"] NTPCR--GGPS1 1 0 1.00 0.00 ONLY_REF_SPLICE NTPCR^ENSG00000135778.12 chr1:232956443:+ GGPS1^ENSG00000152904.11 chr1:235335242:+ YES_LDAS 0.0102 GT 1.9899 AG 1.7465 ["INTRACHROMOSOMAL[chr1:2.34Mb]"] NTAQ1--SMARCE1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NTAQ1^ENSG00000156795.8 chr8:123437334:+ SMARCE1^ENSG00000073584.20 chr17:40637692:- NO_LDAS 0.0102 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr8--chr17]"] NT5DC1--MAP3K5 1 0 1.00 0.00 ONLY_REF_SPLICE NT5DC1^ENSG00000178425.14 chr6:116117945:+ MAP3K5^ENSG00000197442.10 chr6:136669395:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr6:20.31Mb]"] NT5DC1--COPZ2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NT5DC1^ENSG00000178425.14 chr6:116106335:+ COPZ2^ENSG00000005243.10 chr17:48026280:- NO_LDAS 0.0102 GT 1.7056 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr17]"] NT5C3A--TTC17 1 0 1.00 0.00 ONLY_REF_SPLICE NT5C3A^ENSG00000122643.22 chr7:33017439:- TTC17^ENSG00000052841.15 chr11:43403998:+ YES_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr11]"] NSUN5--PSMB3 1 0 0.50 0.00 INCL_NON_REF_SPLICE NSUN5^ENSG00000130305.17 chr7:73304747:- PSMB3^ENSG00000277791.5 chr17:38753270:+ YES_LDAS 0.0051 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr17]"] NSUN2--MAP3K2 1 0 1.00 0.00 ONLY_REF_SPLICE NSUN2^ENSG00000037474.15 chr5:6606820:- MAP3K2^ENSG00000169967.16 chr2:127343194:- NO_LDAS 0.0102 GT 1.8062 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr2]"] NSUN2--DAPK3 1 0 1.00 0.00 INCL_NON_REF_SPLICE NSUN2^ENSG00000037474.15 chr5:6599861:- DAPK3^ENSG00000167657.14 chr19:3959376:- YES_LDAS 0.0102 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chr5--chr19]"] NSD1--PCNX4 1 0 1.00 0.00 ONLY_REF_SPLICE NSD1^ENSG00000165671.21 chr5:177136030:+ PCNX4^ENSG00000126773.13 chr14:60114700:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5301 ["INTERCHROMOSOMAL[chr5--chr14]"] NRROS--CENPF 1 0 1.00 0.00 INCL_NON_REF_SPLICE NRROS^ENSG00000174004.6 chr3:196660740:+ CENPF^ENSG00000117724.13 chr1:214642069:+ YES_LDAS 0.0102 GC 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr1]"] NRROS--ABCF2 1 0 1.00 0.00 ONLY_REF_SPLICE NRROS^ENSG00000174004.6 chr3:196654647:+ ABCF2^ENSG00000033050.9 chr7:151216029:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr7]"] NR3C1--MYO6 1 0 1.00 0.00 ONLY_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143310097:- MYO6^ENSG00000196586.16 chr6:75907605:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr6]"] NR3C1--ARHGAP26 1 0 1.00 0.00 ONLY_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143399656:- ARHGAP26^ENSG00000145819.18 chr5:143014080:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["Klijn_CellLines","INTRACHROMOSOMAL[chr5:0.05Mb]","LOCAL_INVERSION:-:+:[48920]"] NR2C2--IST1 1 0 1.00 0.00 ONLY_REF_SPLICE NR2C2^ENSG00000177463.15 chr3:15024208:+ IST1^ENSG00000182149.21 chr16:71922474:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9219 ["INTERCHROMOSOMAL[chr3--chr16]"] NR1H2--DDTL 1 0 0.50 0.00 INCL_NON_REF_SPLICE NR1H2^ENSG00000131408.15 chr19:50377524:+ DDTL^ENSG00000099974.8 chr22:23971286:+ NO_LDAS 0.0051 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr22]"] NPTN--MCM6 1 0 1.00 0.00 ONLY_REF_SPLICE NPTN^ENSG00000156642.17 chr15:73633125:- MCM6^ENSG00000076003.5 chr2:135858004:- YES_LDAS 0.0102 GT 1.7819 AG 1.2729 ["INTERCHROMOSOMAL[chr15--chr2]"] NPTN--HEXA 1 0 1.00 0.00 ONLY_REF_SPLICE NPTN^ENSG00000156642.17 chr15:73587524:- HEXA^ENSG00000213614.10 chr15:72356617:- YES_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTRACHROMOSOMAL[chr15:1.18Mb]"] NPIPB13--SMG1P3 1 0 0.17 0.00 ONLY_REF_SPLICE NPIPB13^ENSG00000198064.13 chr16:30231440:- SMG1P3^ENSG00000180747.15 chr16:21453074:- YES_LDAS 0.0017 GT 1.5058 AG 1.9899 ["INTRACHROMOSOMAL[chr16:8.70Mb]"] NPHP4--SF3B3 1 0 1.00 0.00 ONLY_REF_SPLICE NPHP4^ENSG00000131697.18 chr1:5986155:- SF3B3^ENSG00000189091.13 chr16:70538323:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr16]"] NPHP3--SMARCC1 1 0 1.00 0.00 ONLY_REF_SPLICE NPHP3^ENSG00000113971.20 chr3:132718994:- SMARCC1^ENSG00000173473.11 chr3:47693300:- YES_LDAS 0.0102 GT 1.9899 AG 1.7232 ["INTRACHROMOSOMAL[chr3:84.90Mb]"] NPHP3--DNAJC13 1 0 1.00 0.00 ONLY_REF_SPLICE NPHP3^ENSG00000113971.20 chr3:132683399:- DNAJC13^ENSG00000138246.17 chr3:132516704:+ YES_LDAS 0.0102 GT 1.9086 AG 1.7232 ["INTRACHROMOSOMAL[chr3:0.14Mb]"] NPAT--DCAF8 1 0 1.00 0.00 ONLY_REF_SPLICE NPAT^ENSG00000149308.17 chr11:108222500:- DCAF8^ENSG00000132716.19 chr1:160244034:- YES_LDAS 0.0102 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr1]"] NOTCH2--ZFP14 1 0 0.50 0.00 ONLY_REF_SPLICE NOTCH2^ENSG00000134250.20 chr1:120069334:- ZFP14^ENSG00000142065.14 chr19:36367971:- YES_LDAS 0.0051 GT 1.5329 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr19]"] NOP9--NKAP 1 0 1.00 0.00 INCL_NON_REF_SPLICE NOP9^ENSG00000196943.14 chr14:24308139:+ NKAP^ENSG00000101882.10 chrX:119932002:- YES_LDAS 0.0102 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr14--chrX]"] NOMO1--ALPI 1 0 0.33 0.00 ONLY_REF_SPLICE NOMO1^ENSG00000103512.15 chr16:14876518:+ ALPI^ENSG00000163295.5 chr2:232458632:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr16--chr2]"] NOL6--AC011487.3 1 0 0.33 0.00 INCL_NON_REF_SPLICE NOL6^ENSG00000165271.17 chr9:33463883:- AC011487.3^ENSG00000274892.1 chr19:53512487:- NO_LDAS 0.0034 GC 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr9--chr19]"] NMT2--PARD3 1 0 1.00 0.00 ONLY_REF_SPLICE NMT2^ENSG00000152465.18 chr10:15135274:- PARD3^ENSG00000148498.16 chr10:34269899:- YES_LDAS 0.0102 GT 1.8892 AG 1.7968 ["INTRACHROMOSOMAL[chr10:18.94Mb]"] NMNAT2--IGSF21 1 0 1.00 0.00 INCL_NON_REF_SPLICE NMNAT2^ENSG00000157064.11 chr1:183252424:- IGSF21^ENSG00000117154.12 chr1:18361526:+ NO_LDAS 0.0102 GT 1.2419 AG 1.5329 ["INTRACHROMOSOMAL[chr1:164.87Mb]"] NME2--NME3 1 0 1.00 0.00 ONLY_REF_SPLICE NME2^ENSG00000243678.12 chr17:51168343:+ NME3^ENSG00000103024.7 chr16:1770993:- NO_LDAS 0.0102 GT 1.8062 AG 1.7232 ["INTERCHROMOSOMAL[chr17--chr16]"] NLGN4Y--XRCC4 1 0 1.00 0.00 ONLY_REF_SPLICE NLGN4Y^ENSG00000165246.14 chrY:14524708:+ XRCC4^ENSG00000152422.16 chr5:83104910:+ NO_LDAS 0.0102 GT 1.3753 AG 1.5301 ["INTERCHROMOSOMAL[chrY--chr5]"] NKTR--PLEKHO1 1 0 1.00 0.00 ONLY_REF_SPLICE NKTR^ENSG00000114857.18 chr3:42632823:+ PLEKHO1^ENSG00000023902.14 chr1:150158819:+ YES_LDAS 0.0102 GT 1.6729 AG 1.6402 ["INTERCHROMOSOMAL[chr3--chr1]"] NKTR--CHCHD5 1 0 1.00 0.00 ONLY_REF_SPLICE NKTR^ENSG00000114857.18 chr3:42601064:+ CHCHD5^ENSG00000125611.15 chr2:112585974:+ NO_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr2]"] NKRF--SEPTIN6 1 0 1.00 0.00 ONLY_REF_SPLICE NKRF^ENSG00000186416.17 chrX:119605731:- SEPTIN6^ENSG00000125354.24 chrX:119653040:- YES_LDAS 0.0102 GT 1.8256 AG 1.9329 ["INTRACHROMOSOMAL[chrX:0.01Mb]","LOCAL_REARRANGEMENT:-:[9281]"] NKIRAS2--SMG1P2 1 0 1.00 0.00 ONLY_REF_SPLICE NKIRAS2^ENSG00000168256.18 chr17:42021671:+ SMG1P2^ENSG00000205534.6 chr16:29554488:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr16]"] NIBAN1--SMG7 1 0 1.00 0.00 ONLY_REF_SPLICE NIBAN1^ENSG00000135842.17 chr1:184974302:- SMG7^ENSG00000116698.21 chr1:183512837:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr1:1.19Mb]"] NIBAN1--FSIP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NIBAN1^ENSG00000135842.17 chr1:184823638:- FSIP1^ENSG00000150667.8 chr15:39782652:- NO_LDAS 0.0102 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr15]"] NFXL1--IFI44 1 0 1.00 0.00 ONLY_REF_SPLICE NFXL1^ENSG00000170448.12 chr4:47913969:- IFI44^ENSG00000137965.11 chr1:78663765:+ YES_LDAS 0.0102 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr4--chr1]"] NFKBIL1--NSD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE NFKBIL1^ENSG00000204498.11 chr6:31558670:+ NSD3^ENSG00000147548.17 chr8:38318940:- YES_LDAS 0.0102 GT 1.2729 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr8]"] NFKBIA--WASH2P 1 0 0.14 0.00 ONLY_REF_SPLICE NFKBIA^ENSG00000100906.11 chr14:35404418:- WASH2P^ENSG00000146556.14 chr2:113588550:+ YES_LDAS 0.0014 GT 1.7465 AG 1.9219 ["INTERCHROMOSOMAL[chr14--chr2]"] NFIC--ILF3 1 0 1.00 0.00 ONLY_REF_SPLICE NFIC^ENSG00000141905.19 chr19:3366666:+ ILF3^ENSG00000129351.17 chr19:10677163:+ YES_LDAS 0.0102 GT 1.7232 AG 1.8892 ["INTRACHROMOSOMAL[chr19:7.19Mb]"] NFIB--U2AF1L4 1 0 1.00 0.00 INCL_NON_REF_SPLICE NFIB^ENSG00000147862.17 chr9:14123180:- U2AF1L4^ENSG00000161265.15 chr19:35743205:- NO_LDAS 0.0102 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr19]"] NFATC3--TRAPPC5 1 0 1.00 0.00 INCL_NON_REF_SPLICE NFATC3^ENSG00000072736.19 chr16:68085486:+ TRAPPC5^ENSG00000181029.9 chr19:7682242:+ NO_LDAS 0.0102 GT 1.5656 AG 1.5546 ["INTERCHROMOSOMAL[chr16--chr19]"] NFAT5--ZNF511 1 0 1.00 0.00 ONLY_REF_SPLICE NFAT5^ENSG00000102908.22 chr16:69566374:+ ZNF511^ENSG00000198546.15 chr10:133312788:+ YES_LDAS 0.0102 GT 1.8295 AG 1.5656 ["INTERCHROMOSOMAL[chr16--chr10]"] NF1--SLC19A2 1 0 1.00 0.00 ONLY_REF_SPLICE NF1^ENSG00000196712.18 chr17:31265339:+ SLC19A2^ENSG00000117479.15 chr1:169477757:- YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr1]"] NEU3--SPCS2 1 0 0.50 0.00 ONLY_REF_SPLICE NEU3^ENSG00000162139.10 chr11:74989154:+ SPCS2^ENSG00000118363.12 chr11:74965034:+ NO_LDAS 0.0051 GT 1.7968 AG 1.5656 ["INTRACHROMOSOMAL[chr11:0.01Mb]","LOCAL_REARRANGEMENT:+:[9246]"] NEMF--POLE2 1 0 1.00 0.00 ONLY_REF_SPLICE NEMF^ENSG00000165525.18 chr14:49838139:- POLE2^ENSG00000100479.13 chr14:49655094:- YES_LDAS 0.0102 GT 1.5656 AG 1.9329 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr14:0.09Mb]","NEIGHBORS[93661]"] NELFB--CRCT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NELFB^ENSG00000188986.9 chr9:137267086:+ CRCT1^ENSG00000169509.6 chr1:152515664:+ NO_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr9--chr1]"] NEK4--RN7SL49P 1 0 1.00 0.00 INCL_NON_REF_SPLICE NEK4^ENSG00000114904.13 chr3:52749760:- RN7SL49P^ENSG00000265802.2 chr13:45002205:+ YES_LDAS 0.0102 GT 1.6729 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr13]"] NDUFV3--MCCC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NDUFV3^ENSG00000160194.18 chr21:42896999:+ MCCC2^ENSG00000131844.16 chr5:71643870:+ NO_LDAS 0.0102 GT 1.7056 AG 1.5546 ["INTERCHROMOSOMAL[chr21--chr5]"] NDUFS8--DCAF7 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFS8^ENSG00000110717.13 chr11:68030733:+ DCAF7^ENSG00000136485.15 chr17:63578470:+ NO_LDAS 0.0102 GT 1.8323 AG 1.6895 ["INTERCHROMOSOMAL[chr11--chr17]"] NDUFS6--SSBP2 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFS6^ENSG00000145494.12 chr5:1802374:+ SSBP2^ENSG00000145687.16 chr5:81650339:- YES_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr5:79.60Mb]"] NDUFB6--TNFAIP3 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFB6^ENSG00000165264.11 chr9:32570960:- TNFAIP3^ENSG00000118503.15 chr6:137871213:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr6]"] NDUFB4--XRCC5 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFB4^ENSG00000065518.8 chr3:120596539:+ XRCC5^ENSG00000079246.16 chr2:216127536:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr2]"] NDUFAF5--ESF1 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFAF5^ENSG00000101247.18 chr20:13785290:+ ESF1^ENSG00000089048.15 chr20:13776270:- YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr20:0.00Mb]","LOCAL_INVERSION:+:-:[88]"] NDUFA12--CHM 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFA12^ENSG00000184752.13 chr12:95002806:- CHM^ENSG00000188419.14 chrX:86027557:- NO_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chrX]"] NDUFA10--FAM13B 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFA10^ENSG00000130414.13 chr2:239990074:- FAM13B^ENSG00000031003.10 chr5:138021197:- YES_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr5]"] NDRG3--TXNDC11 1 0 1.00 0.00 ONLY_REF_SPLICE NDRG3^ENSG00000101079.21 chr20:36656360:- TXNDC11^ENSG00000153066.13 chr16:11688445:- YES_LDAS 0.0102 GT 1.8323 AG 1.6895 ["INTERCHROMOSOMAL[chr20--chr16]"] NCOR1--TRNAU1AP 1 0 1.00 0.00 ONLY_REF_SPLICE NCOR1^ENSG00000141027.21 chr17:16186554:- TRNAU1AP^ENSG00000180098.9 chr1:28567294:+ YES_LDAS 0.0102 GT 1.9656 AG 1.2729 ["INTERCHROMOSOMAL[chr17--chr1]"] NCOR1--PPP2R5C 1 0 1.00 0.00 ONLY_REF_SPLICE NCOR1^ENSG00000141027.21 chr17:16101250:- PPP2R5C^ENSG00000078304.19 chr14:101925141:+ YES_LDAS 0.0102 GT 1.5058 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr14]"] NCOA4--TIMM23 1 0 1.00 0.00 ONLY_REF_SPLICE NCOA4^ENSG00000266412.6 chr10:46014854:- TIMM23^ENSG00000265354.4 chr10:46003203:+ YES_LDAS 0.0102 GT 1.7968 AG 1.7968 ["INTRACHROMOSOMAL[chr10:0.00Mb]","LOCAL_INVERSION:-:+:[1346]"] NCOA1--AC097717.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NCOA1^ENSG00000084676.15 chr2:24665762:+ AC097717.1^ENSG00000232732.11 chr2:199909202:- NO_LDAS 0.0102 GC 1.5219 AG 1.7232 ["INTRACHROMOSOMAL[chr2:175.10Mb]"] NCF1B--SIRT6 1 0 1.00 0.00 ONLY_REF_SPLICE NCF1B^ENSG00000182487.12 chr7:73220717:+ SIRT6^ENSG00000077463.15 chr19:4179286:- NO_LDAS 0.0102 GT 1.7968 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr19]"] NCF1B--GSTK1 1 0 1.00 0.00 ONLY_REF_SPLICE NCF1B^ENSG00000182487.12 chr7:73223956:+ GSTK1^ENSG00000197448.14 chr7:143268788:+ YES_LDAS 0.0102 GT 1.9329 AG 1.3996 ["INTRACHROMOSOMAL[chr7:70.01Mb]"] NCAPD2--HNF1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE NCAPD2^ENSG00000010292.13 chr12:6528328:+ HNF1B^ENSG00000275410.5 chr17:37745031:- NO_LDAS 0.0102 GT 1.8892 AG 1.5329 ["INTERCHROMOSOMAL[chr12--chr17]"] NCAPD2--CILP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NCAPD2^ENSG00000010292.13 chr12:6528328:+ CILP2^ENSG00000160161.9 chr19:19542939:+ NO_LDAS 0.0102 GT 1.8892 AG 1.5546 ["INTERCHROMOSOMAL[chr12--chr19]"] NBR1--PSME3IP1 1 0 1.00 0.00 ONLY_REF_SPLICE NBR1^ENSG00000188554.15 chr17:43203786:+ PSME3IP1^ENSG00000172775.17 chr16:57173869:- YES_LDAS 0.0102 GT 1.8892 AG 1.5546 ["INTERCHROMOSOMAL[chr17--chr16]"] NBR1--AP4E1 1 0 1.00 0.00 ONLY_REF_SPLICE NBR1^ENSG00000188554.15 chr17:43194499:+ AP4E1^ENSG00000081014.11 chr15:50912078:+ YES_LDAS 0.0102 GT 1.8892 AG 1.2419 ["INTERCHROMOSOMAL[chr17--chr15]"] NBPF14--ZFP14 1 0 0.50 0.00 ONLY_REF_SPLICE NBPF14^ENSG00000270629.6 chr1:148679462:- ZFP14^ENSG00000142065.14 chr19:36367971:- YES_LDAS 0.0051 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr19]"] NBN--OSGIN2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NBN^ENSG00000104320.14 chr8:89935544:- OSGIN2^ENSG00000164823.11 chr8:89924503:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7056 ["INTRACHROMOSOMAL[chr8:0.01Mb]","LOCAL_INVERSION:-:+:[5443]"] NAT10--ALDH16A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NAT10^ENSG00000135372.9 chr11:34142291:+ ALDH16A1^ENSG00000161618.10 chr19:49468512:+ NO_LDAS 0.0102 AT 1.6895 AC 1.7819 ["INTERCHROMOSOMAL[chr11--chr19]"] NAPRT--TIFA 1 0 1.00 0.00 INCL_NON_REF_SPLICE NAPRT^ENSG00000147813.16 chr8:143576771:- TIFA^ENSG00000145365.11 chr4:112278434:- YES_LDAS 0.0102 GT 1.7232 AG 1.8062 ["INTERCHROMOSOMAL[chr8--chr4]"] NAP1L4--CEP41 1 0 1.00 0.00 ONLY_REF_SPLICE NAP1L4^ENSG00000205531.13 chr11:2959770:- CEP41^ENSG00000106477.20 chr7:130399039:- YES_LDAS 0.0102 GT 1.7968 AG 1.8256 ["INTERCHROMOSOMAL[chr11--chr7]"] NAMPT--AC021078.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE NAMPT^ENSG00000105835.13 chr7:106251057:- AC021078.1^ENSG00000230551.4 chr5:149496860:- YES_LDAS 0.0051 GT 0.9968 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr5]"] NAIPP2--NPLOC4 1 0 1.00 0.00 ONLY_REF_SPLICE NAIPP2^ENSG00000179978.11 chr5:70123294:- NPLOC4^ENSG00000182446.14 chr17:81608822:- YES_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr5--chr17]"] NADSYN1--PPHLN1 1 0 1.00 0.00 ONLY_REF_SPLICE NADSYN1^ENSG00000172890.13 chr11:71485648:+ PPHLN1^ENSG00000134283.18 chr12:42374638:+ YES_LDAS 0.0102 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr12]"] NADK--SRRT 1 0 1.00 0.00 ONLY_REF_SPLICE NADK^ENSG00000008130.15 chr1:1755374:- SRRT^ENSG00000087087.20 chr7:100886247:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr7]"] NACC1--CRLF3 1 0 0.33 0.00 INCL_NON_REF_SPLICE NACC1^ENSG00000160877.6 chr19:13136158:+ CRLF3^ENSG00000176390.12 chr17:30803903:- NO_LDAS 0.0034 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr19--chr17]"] NACC1--CBS 1 0 0.33 0.00 INCL_NON_REF_SPLICE NACC1^ENSG00000160877.6 chr19:13136158:+ CBS^ENSG00000160200.18 chr21:43065618:- NO_LDAS 0.0034 GT 1.7465 AG 1.5546 ["INTERCHROMOSOMAL[chr19--chr21]"] NAA38--SENP6 1 0 1.00 0.00 ONLY_REF_SPLICE NAA38^ENSG00000183011.13 chr17:7883235:- SENP6^ENSG00000112701.18 chr6:75695804:+ YES_LDAS 0.0102 GT 1.5329 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr6]"] NAA35--PPHLN1 1 0 1.00 0.00 ONLY_REF_SPLICE NAA35^ENSG00000135040.16 chr9:85962180:+ PPHLN1^ENSG00000134283.18 chr12:42441315:+ NO_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr12]"] N6AMT1--RPS4Y1 1 0 1.00 0.00 INCL_NON_REF_SPLICE N6AMT1^ENSG00000156239.12 chr21:28872613:- RPS4Y1^ENSG00000129824.16 chrY:2844077:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr21--chrY]"] N4BP2L2--PDS5B 1 0 1.00 0.00 ONLY_REF_SPLICE N4BP2L2^ENSG00000244754.9 chr13:32517857:- PDS5B^ENSG00000083642.19 chr13:32648754:+ YES_LDAS 0.0102 GT 1.4295 AG 1.8256 ["INTRACHROMOSOMAL[chr13:0.05Mb]","LOCAL_INVERSION:-:+:[47567]"] MZF1--ZNF623 1 0 1.00 0.00 ONLY_REF_SPLICE MZF1^ENSG00000099326.9 chr19:58569277:- ZNF623^ENSG00000183309.12 chr8:143649898:+ NO_LDAS 0.0102 GT 1.7968 AG 1.7819 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr8]"] MZB1--UNKL 1 0 1.00 0.00 ONLY_REF_SPLICE MZB1^ENSG00000170476.16 chr5:139389327:- UNKL^ENSG00000059145.19 chr16:1370357:- YES_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr16]"] MZB1--PAIP2 1 0 1.00 0.00 ONLY_REF_SPLICE MZB1^ENSG00000170476.16 chr5:139389680:- PAIP2^ENSG00000120727.13 chr5:139368733:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr5:0.02Mb]","LOCAL_INVERSION:-:+:[17747]"] MYOCOS--TMEM200A 1 0 1.00 0.00 ONLY_REF_SPLICE MYOCOS^ENSG00000283683.1 chr1:171604377:+ TMEM200A^ENSG00000164484.12 chr6:130440407:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr6]"] MYO5A--ZNF516 1 0 1.00 0.00 ONLY_REF_SPLICE MYO5A^ENSG00000197535.15 chr15:52528780:- ZNF516^ENSG00000101493.11 chr18:76443211:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr18]"] MYO3B--UBR3 1 0 1.00 0.00 ONLY_REF_SPLICE MYO3B^ENSG00000071909.19 chr2:170236136:+ UBR3^ENSG00000144357.18 chr2:169942493:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTRACHROMOSOMAL[chr2:0.09Mb]","LOCAL_REARRANGEMENT:+:[94014]"] MYO3B--CERS6 1 0 1.00 0.00 ONLY_REF_SPLICE MYO3B^ENSG00000071909.19 chr2:170407844:+ CERS6^ENSG00000172292.15 chr2:168547596:+ NO_LDAS 0.0102 GT 1.8323 AG 1.9329 ["INTRACHROMOSOMAL[chr2:1.40Mb]"] MYO1C--PITPNA 1 0 1.00 0.00 ONLY_REF_SPLICE MYO1C^ENSG00000197879.17 chr17:1491600:- PITPNA^ENSG00000174238.15 chr17:1558559:- YES_LDAS 0.0102 GT 1.5656 AG 1.9656 ["DEEPEST2019","INTRACHROMOSOMAL[chr17:0.03Mb]","LOCAL_REARRANGEMENT:-:[25032]"] MYO16--SIN3B 1 0 1.00 0.00 INCL_NON_REF_SPLICE MYO16^ENSG00000041515.16 chr13:109140823:+ SIN3B^ENSG00000127511.10 chr19:16841771:+ NO_LDAS 0.0102 GT 1.8892 AG 1.7056 ["INTERCHROMOSOMAL[chr13--chr19]"] MYO15A--TUFM 1 0 1.00 0.00 INCL_NON_REF_SPLICE MYO15A^ENSG00000091536.19 chr17:18159936:+ TUFM^ENSG00000178952.11 chr16:28846106:- NO_LDAS 0.0102 GT 1.6402 AG 1.3996 ["INTERCHROMOSOMAL[chr17--chr16]"] MYCBP2-AS1--SLC7A6 1 0 1.00 0.00 ONLY_REF_SPLICE MYCBP2-AS1^ENSG00000236051.7 chr13:77092567:+ SLC7A6^ENSG00000103064.15 chr16:68294705:+ NO_LDAS 0.0102 GT 1.9329 AG 1.4295 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr13--chr16]"] MYBL2--CEP72 1 0 1.00 0.00 ONLY_REF_SPLICE MYBL2^ENSG00000101057.16 chr20:43682886:+ CEP72^ENSG00000112877.8 chr5:618990:+ YES_LDAS 0.0102 GT 1.3383 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr5]"] MYB--SRSF11 1 0 1.00 0.00 ONLY_REF_SPLICE MYB^ENSG00000118513.19 chr6:135203324:+ SRSF11^ENSG00000116754.13 chr1:70228422:+ YES_LDAS 0.0102 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] MXD4--EEF1A1P13 1 0 0.33 0.00 INCL_NON_REF_SPLICE MXD4^ENSG00000123933.17 chr4:2250594:- EEF1A1P13^ENSG00000250182.3 chr5:14653356:- YES_LDAS 0.0034 GT 1.5219 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr5]"] MVP--DHX15 1 0 1.00 0.00 INCL_NON_REF_SPLICE MVP^ENSG00000013364.19 chr16:29846235:+ DHX15^ENSG00000109606.13 chr4:24576583:- YES_LDAS 0.0102 GT 1.3996 AG 1.2729 ["INTERCHROMOSOMAL[chr16--chr4]"] MTREX--RN7SL842P 1 0 0.10 0.00 INCL_NON_REF_SPLICE MTREX^ENSG00000039123.16 chr5:55424241:+ RN7SL842P^ENSG00000243066.3 chr19:14588414:+ YES_LDAS 0.001 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr19]"] MTREX--RN7SL827P 1 0 0.10 0.00 INCL_NON_REF_SPLICE MTREX^ENSG00000039123.16 chr5:55424241:+ RN7SL827P^ENSG00000271986.2 chr6:73487820:- YES_LDAS 0.001 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr6]"] MTREX--RN7SL724P 1 0 0.10 0.00 INCL_NON_REF_SPLICE MTREX^ENSG00000039123.16 chr5:55424241:+ RN7SL724P^ENSG00000244692.3 chr3:139609901:- YES_LDAS 0.001 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr3]"] MTREX--RN7SL685P 1 0 0.10 0.00 INCL_NON_REF_SPLICE MTREX^ENSG00000039123.16 chr5:55424241:+ RN7SL685P^ENSG00000242315.3 chr8:100957937:+ YES_LDAS 0.001 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr8]"] MTREX--RN7SL454P 1 0 0.10 0.00 INCL_NON_REF_SPLICE MTREX^ENSG00000039123.16 chr5:55424241:+ RN7SL454P^ENSG00000243426.3 chr17:78532998:- YES_LDAS 0.001 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr17]"] MTREX--RN7SL37P 1 0 0.10 0.00 INCL_NON_REF_SPLICE MTREX^ENSG00000039123.16 chr5:55424241:+ RN7SL37P^ENSG00000242493.3 chr5:37246422:- YES_LDAS 0.001 GT 1.6402 AG 1.9656 ["INTRACHROMOSOMAL[chr5:18.06Mb]"] MTREX--RN7SL181P 1 0 0.10 0.00 INCL_NON_REF_SPLICE MTREX^ENSG00000039123.16 chr5:55424241:+ RN7SL181P^ENSG00000243738.3 chr9:121203210:+ YES_LDAS 0.001 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr9]"] MTR--MRPS14 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTR^ENSG00000116984.15 chr1:236897049:+ MRPS14^ENSG00000120333.4 chr1:175023363:- NO_LDAS 0.0102 GT 1.9219 AG 1.9086 ["INTRACHROMOSOMAL[chr1:61.77Mb]"] MTR--ADAMTS15 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTR^ENSG00000116984.15 chr1:236863554:+ ADAMTS15^ENSG00000166106.3 chr11:130476167:+ NO_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr11]"] MTOR--FAM104A 1 0 1.00 0.00 ONLY_REF_SPLICE MTOR^ENSG00000198793.13 chr1:11134351:- FAM104A^ENSG00000133193.12 chr17:73212740:- YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr17]"] MTMR9--PICALM 1 0 1.00 0.00 ONLY_REF_SPLICE MTMR9^ENSG00000104643.10 chr8:11295302:+ PICALM^ENSG00000073921.18 chr11:85959060:- YES_LDAS 0.0102 GT 1.9899 AG 1.7056 ["INTERCHROMOSOMAL[chr8--chr11]"] MTMR1--SRP9 1 0 0.50 0.00 ONLY_REF_SPLICE MTMR1^ENSG00000063601.17 chrX:150699300:+ SRP9^ENSG00000143742.14 chr1:225777935:+ YES_LDAS 0.0051 GT 1.9219 AG 1.7819 ["INTERCHROMOSOMAL[chrX--chr1]"] MTHFS--BCL2A1 1 0 1.00 0.00 ONLY_REF_SPLICE MTHFS^ENSG00000136371.11 chr15:79896791:- BCL2A1^ENSG00000140379.9 chr15:79961174:- YES_LDAS 0.0102 GT 1.9086 AG 1.8256 ["TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr15:0.06Mb]","LOCAL_REARRANGEMENT:-:[63513]"] MTHFD2P6--RAVER1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTHFD2P6^ENSG00000249266.1 chr5:41968297:- RAVER1^ENSG00000161847.14 chr19:10333380:- NO_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr5--chr19]"] MTHFD2--MOB1A 1 0 1.00 0.00 ONLY_REF_SPLICE MTHFD2^ENSG00000065911.13 chr2:74198742:+ MOB1A^ENSG00000114978.18 chr2:74172752:- YES_LDAS 0.0102 GT 1.7819 AG 1.8295 ["INTRACHROMOSOMAL[chr2:0.01Mb]","LOCAL_INVERSION:+:-:[7274]"] MTG1--HNRNPH2 1 0 1.00 0.00 ONLY_REF_SPLICE MTG1^ENSG00000148824.19 chr10:133402773:+ HNRNPH2^ENSG00000126945.9 chrX:101411936:+ NO_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chrX]"] MTF2--HOOK1 1 0 1.00 0.00 ONLY_REF_SPLICE MTF2^ENSG00000143033.18 chr1:93079531:+ HOOK1^ENSG00000134709.12 chr1:59858428:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr1:33.20Mb]"] MTERF4--BRD1 1 0 1.00 0.00 ONLY_REF_SPLICE MTERF4^ENSG00000122085.17 chr2:241089188:- BRD1^ENSG00000100425.18 chr22:49794294:- YES_LDAS 0.0102 GT 1.4566 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr22]"] MTERF2--SEC24B 1 0 1.00 0.00 ONLY_REF_SPLICE MTERF2^ENSG00000120832.10 chr12:106986969:- SEC24B^ENSG00000138802.11 chr4:109491327:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr4]"] MTDH--PLEKHF2 1 0 1.00 0.00 ONLY_REF_SPLICE MTDH^ENSG00000147649.10 chr8:97644887:+ PLEKHF2^ENSG00000175895.4 chr8:95154031:+ NO_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTRACHROMOSOMAL[chr8:2.49Mb]"] MTDH--LGI2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTDH^ENSG00000147649.10 chr8:97644675:+ LGI2^ENSG00000153012.12 chr4:25030665:- NO_LDAS 0.0102 GC 1.8062 AG 1.5219 ["INTERCHROMOSOMAL[chr8--chr4]"] MTDH--EIF3E 1 0 1.00 0.00 ONLY_REF_SPLICE MTDH^ENSG00000147649.10 chr8:97644887:+ EIF3E^ENSG00000104408.11 chr8:108229195:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr8:10.43Mb]"] MTDH--AC073487.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTDH^ENSG00000147649.10 chr8:97661173:+ AC073487.1^ENSG00000257509.1 chr12:55761955:- NO_LDAS 0.0102 GT 1.0530 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr12]"] MT1X--MT1IP 1 0 1.00 0.00 ONLY_REF_SPLICE MT1X^ENSG00000187193.9 chr16:56683230:+ MT1IP^ENSG00000275691.2 chr16:56677652:+ NO_LDAS 0.0102 GT 1.9086 AG 1.5656 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:+:[4707]"] MT-TN--AC026202.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE MT-TN^ENSG00000210135.1 chrM:5678:- AC026202.3^ENSG00000268509.2 chr3:5188167:- YES_LDAS 0.0102 GT 1.7819 AG 1.7056 ["INTERCHROMOSOMAL[chrM--chr3]"] MSX1--COTL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MSX1^ENSG00000163132.8 chr4:4860368:+ COTL1^ENSG00000103187.8 chr16:84617962:- NO_LDAS 0.0102 GT 1.1589 AG 1.2729 ["INTERCHROMOSOMAL[chr4--chr16]"] MSL3--GANAB 1 0 1.00 0.00 INCL_NON_REF_SPLICE MSL3^ENSG00000005302.19 chrX:11767009:+ GANAB^ENSG00000089597.18 chr11:62630655:- NO_LDAS 0.0102 GT 1.8256 AG 1.6402 ["INTERCHROMOSOMAL[chrX--chr11]"] MSH4--RABGGTB 1 0 1.00 0.00 ONLY_REF_SPLICE MSH4^ENSG00000057468.7 chr1:75797229:+ RABGGTB^ENSG00000137955.16 chr1:75794084:+ YES_LDAS 0.0102 GC 1.7465 AG 1.9656 ["TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:+:[1796]"] MSC--SSBP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MSC^ENSG00000178860.9 chr8:71844113:- SSBP1^ENSG00000106028.11 chr7:141739150:+ NO_LDAS 0.0102 GT 1.7819 AG 1.0530 ["INTERCHROMOSOMAL[chr8--chr7]"] MRTFB--TBCA 1 0 1.00 0.00 ONLY_REF_SPLICE MRTFB^ENSG00000186260.17 chr16:14140760:+ TBCA^ENSG00000171530.15 chr5:77708347:- YES_LDAS 0.0102 GT 1.4716 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr5]"] MRRF--RABGGTB 1 0 1.00 0.00 ONLY_REF_SPLICE MRRF^ENSG00000148187.18 chr9:122271075:+ RABGGTB^ENSG00000137955.16 chr1:75789159:+ YES_LDAS 0.0102 GT 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr1]"] MRRF--NFAT5 1 0 1.00 0.00 ONLY_REF_SPLICE MRRF^ENSG00000148187.18 chr9:122280598:+ NFAT5^ENSG00000102908.22 chr16:69684890:+ NO_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr16]"] MRPS6--TTC3 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS6^ENSG00000243927.6 chr21:34073745:+ TTC3^ENSG00000182670.13 chr21:37108392:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr21:2.93Mb]"] MRPS22--COPB2 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS22^ENSG00000175110.13 chr3:139350322:+ COPB2^ENSG00000184432.11 chr3:139383435:- YES_LDAS 0.0102 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr3:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[3277]"] MRPL37--ZNF335 1 0 1.00 0.00 ONLY_REF_SPLICE MRPL37^ENSG00000116221.15 chr1:54216344:+ ZNF335^ENSG00000198026.8 chr20:45962182:- YES_LDAS 0.0102 GT 1.5301 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr20]"] MRPL20--TXNDC12 1 0 1.00 0.00 ONLY_REF_SPLICE MRPL20^ENSG00000242485.6 chr1:1405809:- TXNDC12^ENSG00000117862.13 chr1:52028630:- YES_LDAS 0.0102 GT 1.5850 AG 1.9329 ["INTRACHROMOSOMAL[chr1:50.61Mb]"] MROH1--VPS52 1 0 1.00 0.00 ONLY_REF_SPLICE MROH1^ENSG00000179832.17 chr8:144168440:+ VPS52^ENSG00000223501.9 chr6:33264103:- YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr6]"] MROH1--GNPTG 1 0 1.00 0.00 ONLY_REF_SPLICE MROH1^ENSG00000179832.17 chr8:144200541:+ GNPTG^ENSG00000090581.10 chr16:1361743:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr16]"] MROH1--ANO9 1 0 1.00 0.00 ONLY_REF_SPLICE MROH1^ENSG00000179832.17 chr8:144250366:+ ANO9^ENSG00000185101.13 chr11:421198:- YES_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr11]"] MRNIP--CDC45 1 0 1.00 0.00 ONLY_REF_SPLICE MRNIP^ENSG00000161010.15 chr5:179840872:- CDC45^ENSG00000093009.11 chr22:19516527:+ YES_LDAS 0.0102 GT 1.8062 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr22]"] MRI1--PPFIA4 1 0 1.00 0.00 ONLY_REF_SPLICE MRI1^ENSG00000037757.14 chr19:13766129:+ PPFIA4^ENSG00000143847.15 chr1:203051769:+ YES_LDAS 0.0102 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] MRI1--EIF1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRI1^ENSG00000037757.14 chr19:13764720:+ EIF1B^ENSG00000114784.4 chr3:40309871:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr3]"] MREG--XRCC5 1 0 1.00 0.00 ONLY_REF_SPLICE MREG^ENSG00000118242.16 chr2:215996306:- XRCC5^ENSG00000079246.16 chr2:216113016:+ YES_LDAS 0.0102 GT 1.8062 AG 1.7819 ["INTRACHROMOSOMAL[chr2:0.07Mb]","LOCAL_INVERSION:-:+:[73368]"] MPRIP--TNFRSF13B 1 0 0.50 0.00 ONLY_REF_SPLICE MPRIP^ENSG00000133030.22 chr17:17078076:+ TNFRSF13B^ENSG00000240505.9 chr17:16940511:- YES_LDAS 0.0051 GT 1.9219 AG 1.7819 ["TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr17:0.07Mb]","LOCAL_INVERSION:+:-:[70339]"] MPRIP--ANO10 1 0 1.00 0.00 ONLY_REF_SPLICE MPRIP^ENSG00000133030.22 chr17:17078076:+ ANO10^ENSG00000160746.13 chr3:43366974:- YES_LDAS 0.0102 GT 1.9219 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr3]"] MPP5--GPHN 1 0 1.00 0.00 ONLY_REF_SPLICE MPP5^ENSG00000072415.10 chr14:67279537:+ GPHN^ENSG00000171723.16 chr14:66879939:+ NO_LDAS 0.0102 GT 1.7819 AG 1.6729 ["YOSHIHARA_TCGA","Klijn_CellLines","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr14:0.06Mb]","LOCAL_REARRANGEMENT:+:[58910]"] MPHOSPH10--NBAS 1 0 1.00 0.00 ONLY_REF_SPLICE MPHOSPH10^ENSG00000124383.9 chr2:71144538:+ NBAS^ENSG00000151779.13 chr2:15539356:- YES_LDAS 0.0102 GT 1.8256 AG 1.9086 ["INTRACHROMOSOMAL[chr2:55.57Mb]"] MOSPD2--MAD1L1 1 0 1.00 0.00 ONLY_REF_SPLICE MOSPD2^ENSG00000130150.12 chrX:14873758:+ MAD1L1^ENSG00000002822.16 chr7:1898390:- YES_LDAS 0.0102 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chrX--chr7]"] MOSPD2--KAT14 1 0 1.00 0.00 ONLY_REF_SPLICE MOSPD2^ENSG00000130150.12 chrX:14873758:+ KAT14^ENSG00000149474.14 chr20:18142208:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chrX--chr20]"] MON2--PDCD4 1 0 1.00 0.00 ONLY_REF_SPLICE MON2^ENSG00000061987.16 chr12:62565380:+ PDCD4^ENSG00000150593.18 chr10:110881233:+ YES_LDAS 0.0102 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr10]"] MOCOS--CMC2 1 0 1.00 0.00 ONLY_REF_SPLICE MOCOS^ENSG00000075643.6 chr18:36187681:+ CMC2^ENSG00000103121.9 chr16:80997429:- YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr16]"] MMRN1--RAMACL 1 0 1.00 0.00 INCL_NON_REF_SPLICE MMRN1^ENSG00000138722.10 chr4:89936277:+ RAMACL^ENSG00000235272.2 chr6:166586288:- NO_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr6]"] MLYCD--TRAPPC6B 1 0 1.00 0.00 ONLY_REF_SPLICE MLYCD^ENSG00000103150.7 chr16:83948332:+ TRAPPC6B^ENSG00000182400.15 chr14:39151839:- NO_LDAS 0.0102 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr16--chr14]"] MLYCD--SRBD1 1 0 1.00 0.00 ONLY_REF_SPLICE MLYCD^ENSG00000103150.7 chr16:83948332:+ SRBD1^ENSG00000068784.13 chr2:45488331:- NO_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr2]"] MLST8--NPHS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MLST8^ENSG00000167965.18 chr16:2208613:+ NPHS1^ENSG00000161270.20 chr19:35846082:- NO_LDAS 0.0102 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr19]"] MLLT3--FOCAD 1 0 1.00 0.00 ONLY_REF_SPLICE MLLT3^ENSG00000171843.17 chr9:20620654:- FOCAD^ENSG00000188352.12 chr9:20976420:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9329 ["DEEPEST2019","INTRACHROMOSOMAL[chr9:0.04Mb]","LOCAL_INVERSION:-:+:[35810]"] MLH1--LRRFIP2 1 0 1.00 0.00 ONLY_REF_SPLICE MLH1^ENSG00000076242.16 chr3:36996709:+ LRRFIP2^ENSG00000093167.18 chr3:37149038:- YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_INVERSION:+:-:[1780]"] MKRN2--ENO1 1 0 1.00 0.00 ONLY_REF_SPLICE MKRN2^ENSG00000075975.17 chr3:12557176:+ ENO1^ENSG00000074800.16 chr1:8865482:- YES_LDAS 0.0102 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr1]"] MIS18BP1--TRIP12 1 0 1.00 0.00 ONLY_REF_SPLICE MIS18BP1^ENSG00000129534.14 chr14:45210380:- TRIP12^ENSG00000153827.14 chr2:229807864:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr2]"] MIR646HG--SLC9A8 1 0 1.00 0.00 ONLY_REF_SPLICE MIR646HG^ENSG00000228340.6 chr20:60204376:+ SLC9A8^ENSG00000197818.12 chr20:49849579:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr20:10.20Mb]"] MIR29B2CHG--FCMR 1 0 1.00 0.00 ONLY_REF_SPLICE MIR29B2CHG^ENSG00000203709.12 chr1:207822204:- FCMR^ENSG00000162894.12 chr1:206905147:- NO_LDAS 0.0102 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.88Mb]"] MIR23AHG--TSPAN33 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIR23AHG^ENSG00000267519.6 chr19:13833624:- TSPAN33^ENSG00000158457.6 chr7:129162418:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr7]"] MIR23AHG--AC246787.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIR23AHG^ENSG00000267519.6 chr19:13836349:- AC246787.2^ENSG00000244620.1 chr14:105896542:+ NO_LDAS 0.0102 GT 1.5301 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr14]"] MIR193BHG--MRTFB 1 0 1.00 0.00 ONLY_REF_SPLICE MIR193BHG^ENSG00000262454.4 chr16:14302536:+ MRTFB^ENSG00000186260.17 chr16:14240237:+ YES_LDAS 0.0102 GT 1.3383 AG 1.7056 ["INTRACHROMOSOMAL[chr16:0.03Mb]","LOCAL_REARRANGEMENT:+:[34616]"] MINK1--MAB21L2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MINK1^ENSG00000141503.17 chr17:4895493:+ MAB21L2^ENSG00000181541.6 chr4:150582841:+ NO_LDAS 0.0102 GT 1.8062 AG 1.1589 ["INTERCHROMOSOMAL[chr17--chr4]"] MINDY4--C11orf49 1 0 1.00 0.00 ONLY_REF_SPLICE MINDY4^ENSG00000106125.14 chr7:30791574:+ C11orf49^ENSG00000149179.14 chr11:47052388:+ YES_LDAS 0.0102 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr11]"] MIF--ERICH5 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIF^ENSG00000240972.2 chr22:23895156:+ ERICH5^ENSG00000177459.11 chr8:98089327:+ YES_LDAS 0.0102 GC 1.4566 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr8]"] MICU2--SACS 1 0 1.00 0.00 ONLY_REF_SPLICE MICU2^ENSG00000165487.14 chr13:21566797:- SACS^ENSG00000151835.16 chr13:23368487:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr13:1.72Mb]"] MICB--CENPF 1 0 1.00 0.00 INCL_NON_REF_SPLICE MICB^ENSG00000204516.10 chr6:31510044:+ CENPF^ENSG00000117724.13 chr1:214648711:+ NO_LDAS 0.0102 GT 1.8256 AG 1.7056 ["INTERCHROMOSOMAL[chr6--chr1]"] MICAL1--AL078581.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MICAL1^ENSG00000135596.18 chr6:109454057:- AL078581.2^ENSG00000233330.1 chr6:149591909:- NO_LDAS 0.0102 GT 1.6895 AG 1.3996 ["INTRACHROMOSOMAL[chr6:40.13Mb]"] MIA2--RASA1 1 0 1.00 0.00 ONLY_REF_SPLICE MIA2^ENSG00000150527.17 chr14:39348977:+ RASA1^ENSG00000145715.15 chr5:87331348:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr5]"] MGMT--ZC3H12C 1 0 1.00 0.00 ONLY_REF_SPLICE MGMT^ENSG00000170430.10 chr10:129536377:+ ZC3H12C^ENSG00000149289.11 chr11:110136663:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr11]"] MEX3C--MIB1 1 0 1.00 0.00 ONLY_REF_SPLICE MEX3C^ENSG00000176624.12 chr18:51196567:- MIB1^ENSG00000101752.12 chr18:21765772:+ YES_LDAS 0.0102 GT 1.7056 AG 1.9656 ["INTRACHROMOSOMAL[chr18:29.30Mb]"] METTL15--AC090159.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE METTL15^ENSG00000169519.21 chr11:28113604:+ AC090159.1^ENSG00000255094.1 chr11:28019558:- YES_LDAS 0.0102 GT 1.4566 AG 1.7968 ["INTRACHROMOSOMAL[chr11:0.09Mb]","LOCAL_INVERSION:+:-:[88673]"] METAP1--EIF4E 1 0 1.00 0.00 ONLY_REF_SPLICE METAP1^ENSG00000164024.12 chr4:98995867:+ EIF4E^ENSG00000151247.13 chr4:98901982:- YES_LDAS 0.0102 GT 1.9086 AG 1.6895 ["Klijn_CellLines","TCGA_StarF2019","INTRACHROMOSOMAL[chr4:0.07Mb]","LOCAL_INVERSION:+:-:[66526]"] MEI1--RECQL5 1 0 1.00 0.00 INCL_NON_REF_SPLICE MEI1^ENSG00000167077.13 chr22:41795847:+ RECQL5^ENSG00000108469.15 chr17:75666557:- NO_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr17]"] MED6--HACE1 1 0 1.00 0.00 ONLY_REF_SPLICE MED6^ENSG00000133997.12 chr14:70584817:- HACE1^ENSG00000085382.12 chr6:104811393:- NO_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr6]"] MED27--SETX 1 0 1.00 0.00 ONLY_REF_SPLICE MED27^ENSG00000160563.14 chr9:132077442:- SETX^ENSG00000107290.14 chr9:132311856:- YES_LDAS 0.0102 GT 1.7968 AG 1.8323 ["INTRACHROMOSOMAL[chr9:0.18Mb]"] MED24--STRADA 1 0 1.00 0.00 INCL_NON_REF_SPLICE MED24^ENSG00000008838.20 chr17:40022705:- STRADA^ENSG00000266173.7 chr17:63719082:- YES_LDAS 0.0102 GC 1.7968 AG 1.8256 ["INTRACHROMOSOMAL[chr17:23.62Mb]"] MED24--MTA3 1 0 1.00 0.00 INCL_NON_REF_SPLICE MED24^ENSG00000008838.20 chr17:40031159:- MTA3^ENSG00000057935.14 chr2:42756793:+ YES_LDAS 0.0102 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr2]"] MED23--AC073862.5 1 0 1.00 0.00 INCL_NON_REF_SPLICE MED23^ENSG00000112282.18 chr6:131610042:- AC073862.5^ENSG00000280200.1 chr12:130976881:+ NO_LDAS 0.0102 GT 1.9086 AG 1.6049 ["INTERCHROMOSOMAL[chr6--chr12]"] MED18--ZNF721 1 0 1.00 0.00 ONLY_REF_SPLICE MED18^ENSG00000130772.14 chr1:28329180:+ ZNF721^ENSG00000182903.16 chr4:444432:- YES_LDAS 0.0102 GT 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr1--chr4]"] MED18--ZC3H7A 1 0 1.00 0.00 ONLY_REF_SPLICE MED18^ENSG00000130772.14 chr1:28330735:+ ZC3H7A^ENSG00000122299.12 chr16:11779363:- YES_LDAS 0.0102 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr16]"] MED13--PTCD1 1 0 1.00 0.00 ONLY_REF_SPLICE MED13^ENSG00000108510.10 chr17:62032349:- PTCD1^ENSG00000106246.18 chr7:99433418:- NO_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr7]"] MED13--MARK2 1 0 1.00 0.00 ONLY_REF_SPLICE MED13^ENSG00000108510.10 chr17:62032349:- MARK2^ENSG00000072518.22 chr11:63902198:+ NO_LDAS 0.0102 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr17--chr11]"] MED12--C17orf75 1 0 1.00 0.00 INCL_NON_REF_SPLICE MED12^ENSG00000184634.16 chrX:71134446:+ C17orf75^ENSG00000108666.10 chr17:32342046:- NO_LDAS 0.0102 GT 1.9656 AG 1.6402 ["INTERCHROMOSOMAL[chrX--chr17]"] MED1--AP001066.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MED1^ENSG00000125686.12 chr17:39431077:- AP001066.1^ENSG00000287088.1 chr21:44530846:+ NO_LDAS 0.0102 AT 1.7819 AC 1.8256 ["INTERCHROMOSOMAL[chr17--chr21]"] ME1--PLAGL1 1 0 1.00 0.00 ONLY_REF_SPLICE ME1^ENSG00000065833.9 chr6:83430877:- PLAGL1^ENSG00000118495.20 chr6:143942663:- NO_LDAS 0.0102 GT 1.6895 AG 1.9656 ["INTRACHROMOSOMAL[chr6:60.51Mb]"] ME1--DOP1A 1 0 1.00 0.00 ONLY_REF_SPLICE ME1^ENSG00000065833.9 chr6:83430877:- DOP1A^ENSG00000083097.14 chr6:83108910:+ YES_LDAS 0.0102 GT 1.6895 AG 1.7232 ["INTRACHROMOSOMAL[chr6:0.04Mb]","LOCAL_INVERSION:-:+:[39052]"] MCPH1--EFR3A 1 0 1.00 0.00 ONLY_REF_SPLICE MCPH1^ENSG00000147316.13 chr8:6455252:+ EFR3A^ENSG00000132294.15 chr8:131940499:+ YES_LDAS 0.0102 GT 1.2867 AG 1.9086 ["INTRACHROMOSOMAL[chr8:125.26Mb]"] MCM9--EPB41L5 1 0 1.00 0.00 ONLY_REF_SPLICE MCM9^ENSG00000111877.18 chr6:118911650:- EPB41L5^ENSG00000115109.14 chr2:120127688:+ YES_LDAS 0.0102 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr2]"] MCM7--MARCHF5 1 0 1.00 0.00 ONLY_REF_SPLICE MCM7^ENSG00000166508.18 chr7:100094173:- MARCHF5^ENSG00000198060.10 chr10:92311135:+ NO_LDAS 0.0102 GT 1.7056 AG 1.7056 ["INTERCHROMOSOMAL[chr7--chr10]"] MCM4--CCDC200 1 0 1.00 0.00 INCL_NON_REF_SPLICE MCM4^ENSG00000104738.18 chr8:47973064:+ CCDC200^ENSG00000236383.8 chr17:43217046:- NO_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr17]"] MCFD2--LPIN1 1 0 1.00 0.00 ONLY_REF_SPLICE MCFD2^ENSG00000180398.13 chr2:46941572:- LPIN1^ENSG00000134324.12 chr2:11765533:+ YES_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr2:35.07Mb]"] MCFD2--CALCB 1 0 0.50 0.00 INCL_NON_REF_SPLICE MCFD2^ENSG00000180398.13 chr2:46941504:- CALCB^ENSG00000175868.14 chr11:14905412:+ NO_LDAS 0.0051 GT 1.7819 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr11]"] MCFD2--AC107223.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE MCFD2^ENSG00000180398.13 chr2:46941504:- AC107223.1^ENSG00000251600.8 chr4:143981797:+ NO_LDAS 0.0051 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr2--chr4]"] MCCC1--FANCM 1 0 1.00 0.00 ONLY_REF_SPLICE MCCC1^ENSG00000078070.13 chr3:183086693:- FANCM^ENSG00000187790.11 chr14:45196172:+ YES_LDAS 0.0102 GT 1.9219 AG 1.7056 ["INTERCHROMOSOMAL[chr3--chr14]"] MBTPS1--BANP 1 0 1.00 0.00 ONLY_REF_SPLICE MBTPS1^ENSG00000140943.17 chr16:84116735:- BANP^ENSG00000172530.20 chr16:87975048:+ YES_LDAS 0.0102 GT 1.5628 AG 1.8062 ["INTRACHROMOSOMAL[chr16:3.83Mb]"] MBNL2--CDK14 1 0 1.00 0.00 ONLY_REF_SPLICE MBNL2^ENSG00000139793.19 chr13:97276409:+ CDK14^ENSG00000058091.17 chr7:90863175:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr13--chr7]"] MBD5--ORC4 1 0 1.00 0.00 ONLY_REF_SPLICE MBD5^ENSG00000204406.14 chr2:148178793:+ ORC4^ENSG00000115947.14 chr2:147958866:- YES_LDAS 0.0102 GT 1.7232 AG 1.7056 ["INTRACHROMOSOMAL[chr2:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[593]"] MBD3--RPH3A 1 0 1.00 0.00 INCL_NON_REF_SPLICE MBD3^ENSG00000071655.18 chr19:1578514:- RPH3A^ENSG00000089169.15 chr12:112847747:+ NO_LDAS 0.0102 GT 1.8295 AG 1.7056 ["INTERCHROMOSOMAL[chr19--chr12]"] MBD3--KCNMB4 1 0 1.00 0.00 INCL_NON_REF_SPLICE MBD3^ENSG00000071655.18 chr19:1576687:- KCNMB4^ENSG00000135643.5 chr12:70431526:+ NO_LDAS 0.0102 GT 1.9656 AG 1.4256 ["INTERCHROMOSOMAL[chr19--chr12]"] MBD2--CHFR 1 0 1.00 0.00 ONLY_REF_SPLICE MBD2^ENSG00000134046.12 chr18:54224018:- CHFR^ENSG00000072609.18 chr12:132822311:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr18--chr12]"] MBD1--RTEL1 1 0 1.00 0.00 ONLY_REF_SPLICE MBD1^ENSG00000141644.17 chr18:50276832:- RTEL1^ENSG00000258366.9 chr20:63687937:+ YES_LDAS 0.0102 GT 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr18--chr20]"] MB21D2--FGF12 1 0 1.00 0.00 ONLY_REF_SPLICE MB21D2^ENSG00000180611.7 chr3:192917630:- FGF12^ENSG00000114279.14 chr3:192360538:- YES_LDAS 0.0102 GT 1.7465 AG 1.7056 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr3:0.03Mb]","NEIGHBORS[29051]"] MATN1--COPS7B 1 0 1.00 0.00 INCL_NON_REF_SPLICE MATN1^ENSG00000162510.6 chr1:30718910:- COPS7B^ENSG00000144524.18 chr2:231791733:+ NO_LDAS 0.0102 GT 1.8062 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr2]"] MAT2B--FRYL 1 0 1.00 0.00 ONLY_REF_SPLICE MAT2B^ENSG00000038274.17 chr5:163517674:+ FRYL^ENSG00000075539.15 chr4:48505615:- YES_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr4]"] MAT2A--PTPN7 1 0 1.00 0.00 ONLY_REF_SPLICE MAT2A^ENSG00000168906.13 chr2:85542373:+ PTPN7^ENSG00000143851.15 chr1:202154323:- YES_LDAS 0.0102 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr1]"] MAT2A--AC026403.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE MAT2A^ENSG00000168906.13 chr2:85542735:+ AC026403.1^ENSG00000229119.3 chr5:166382531:+ YES_LDAS 0.0034 GT 1.6729 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr5]"] MARS1--FCMR 1 0 1.00 0.00 INCL_NON_REF_SPLICE MARS1^ENSG00000166986.15 chr12:57516325:+ FCMR^ENSG00000162894.12 chr1:206905147:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr1]"] MARK4--TRAPPC6A 1 0 1.00 0.00 ONLY_REF_SPLICE MARK4^ENSG00000007047.15 chr19:45266281:+ TRAPPC6A^ENSG00000007255.10 chr19:45165194:- YES_LDAS 0.0102 GT 1.8256 AG 1.7056 ["INTRACHROMOSOMAL[chr19:0.07Mb]","LOCAL_INVERSION:+:-:[73034]"] MARK4--SAE1 1 0 1.00 0.00 ONLY_REF_SPLICE MARK4^ENSG00000007047.15 chr19:45271708:+ SAE1^ENSG00000142230.13 chr19:47209159:+ YES_LDAS 0.0102 GT 1.8256 AG 1.7819 ["INTRACHROMOSOMAL[chr19:1.81Mb]"] MARCKSL1--MARCKS 1 0 1.00 0.00 ONLY_REF_SPLICE MARCKSL1^ENSG00000175130.7 chr1:32335947:- MARCKS^ENSG00000277443.3 chr6:113859683:+ NO_LDAS 0.0102 GT 1.5850 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr6]"] MARCKS--VPS13A 1 0 1.00 0.00 ONLY_REF_SPLICE MARCKS^ENSG00000277443.3 chr6:113857847:+ VPS13A^ENSG00000197969.14 chr9:77415956:+ NO_LDAS 0.0102 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr9]"] MARCHF6--TTC3 1 0 1.00 0.00 ONLY_REF_SPLICE MARCHF6^ENSG00000145495.16 chr5:10353917:+ TTC3^ENSG00000182670.13 chr21:37108392:+ YES_LDAS 0.0102 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr21]"] MARCHF6--CFDP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MARCHF6^ENSG00000145495.16 chr5:10391692:+ CFDP1^ENSG00000153774.9 chr16:75414630:- NO_LDAS 0.0102 GT 1.8323 AG 1.3996 ["INTERCHROMOSOMAL[chr5--chr16]"] MARCHF5--R3HCC1L 1 0 1.00 0.00 ONLY_REF_SPLICE MARCHF5^ENSG00000198060.10 chr10:92349532:+ R3HCC1L^ENSG00000166024.14 chr10:98208101:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8323 ["INTRACHROMOSOMAL[chr10:5.78Mb]"] MAPRE2--PHIP 1 0 1.00 0.00 ONLY_REF_SPLICE MAPRE2^ENSG00000166974.13 chr18:35102159:+ PHIP^ENSG00000146247.14 chr6:79060818:- YES_LDAS 0.0102 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr18--chr6]"] MAPKBP1--ADAP1 1 0 1.00 0.00 ONLY_REF_SPLICE MAPKBP1^ENSG00000137802.14 chr15:41813781:+ ADAP1^ENSG00000105963.15 chr7:920050:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr7]"] MAPKAPK2--EIPR1 1 0 1.00 0.00 ONLY_REF_SPLICE MAPKAPK2^ENSG00000162889.11 chr1:206685508:+ EIPR1^ENSG00000032389.13 chr2:3197017:- YES_LDAS 0.0102 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr2]"] MAPKAP1--RAD23B 1 0 1.00 0.00 ONLY_REF_SPLICE MAPKAP1^ENSG00000119487.17 chr9:125706971:- RAD23B^ENSG00000119318.13 chr9:107300141:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7968 ["INTRACHROMOSOMAL[chr9:18.11Mb]"] MAPKAP1--NR6A1 1 0 1.00 0.00 ONLY_REF_SPLICE MAPKAP1^ENSG00000119487.17 chr9:125543059:- NR6A1^ENSG00000148200.17 chr9:124733349:- YES_LDAS 0.0102 GT 1.9656 AG 1.8323 ["INTRACHROMOSOMAL[chr9:0.67Mb]"] MAPK12--TMEM88 1 0 1.00 0.00 ONLY_REF_SPLICE MAPK12^ENSG00000188130.14 chr22:50256935:- TMEM88^ENSG00000167874.7 chr17:7855771:+ NO_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr17]"] MAP4--C1orf112 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAP4^ENSG00000047849.21 chr3:47855111:- C1orf112^ENSG00000000460.17 chr1:169827770:+ YES_LDAS 0.0102 GT 1.6402 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr1]"] MAP3K4--GEMIN5 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAP3K4^ENSG00000085511.20 chr6:161086657:+ GEMIN5^ENSG00000082516.9 chr5:154901421:- NO_LDAS 0.0102 GT 1.6729 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr5]"] MAP3K14--RN7SL767P 1 0 0.12 0.00 INCL_NON_REF_SPLICE MAP3K14^ENSG00000006062.18 chr17:45274130:- RN7SL767P^ENSG00000241529.3 chr3:113632777:+ YES_LDAS 0.0012 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr3]"] MAP2K6--SPAG9 1 0 1.00 0.00 ONLY_REF_SPLICE MAP2K6^ENSG00000108984.15 chr17:69415000:+ SPAG9^ENSG00000008294.21 chr17:51079704:- YES_LDAS 0.0102 GT 1.9899 AG 1.5628 ["INTRACHROMOSOMAL[chr17:18.29Mb]"] MAP2K2--ZADH2 1 0 1.00 0.00 ONLY_REF_SPLICE MAP2K2^ENSG00000126934.14 chr19:4110509:- ZADH2^ENSG00000180011.7 chr18:75202340:- YES_LDAS 0.0102 GT 1.9656 AG 1.4566 ["INTERCHROMOSOMAL[chr19--chr18]"] MANF--AP3B1 1 0 1.00 0.00 ONLY_REF_SPLICE MANF^ENSG00000145050.19 chr3:51386335:+ AP3B1^ENSG00000132842.14 chr5:78129307:- NO_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr5]"] MAN1A2--LRCH1 1 0 1.00 0.00 ONLY_REF_SPLICE MAN1A2^ENSG00000198162.12 chr1:117368485:+ LRCH1^ENSG00000136141.15 chr13:46650201:+ YES_LDAS 0.0102 GT 1.8295 AG 1.4566 ["INTERCHROMOSOMAL[chr1--chr13]"] MAN1A1--AC022079.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAN1A1^ENSG00000111885.7 chr6:119348463:- AC022079.2^ENSG00000278733.1 chr12:28186149:- NO_LDAS 0.0102 GT 1.6402 AG 1.1033 ["INTERCHROMOSOMAL[chr6--chr12]"] MAD1L1--MAFK 1 0 1.00 0.00 ONLY_REF_SPLICE MAD1L1^ENSG00000002822.16 chr7:2213212:- MAFK^ENSG00000198517.10 chr7:1539149:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr7:0.27Mb]"] MAD1L1--EXD3 1 0 1.00 0.00 ONLY_REF_SPLICE MAD1L1^ENSG00000002822.16 chr7:2149152:- EXD3^ENSG00000187609.16 chr9:137395404:- YES_LDAS 0.0102 GT 1.7465 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr9]"] MAD1L1--AL022328.4 1 0 1.00 0.00 ONLY_REF_SPLICE MAD1L1^ENSG00000002822.16 chr7:1936687:- AL022328.4^ENSG00000273253.2 chr22:50199328:- NO_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr22]"] MACC1--COL19A1 1 0 1.00 0.00 ONLY_REF_SPLICE MACC1^ENSG00000183742.13 chr7:20217299:- COL19A1^ENSG00000082293.13 chr6:70102169:+ YES_LDAS 0.0102 GT 1.5656 AG 1.2867 ["INTERCHROMOSOMAL[chr7--chr6]"] LZTS2--PRMT1 1 0 1.00 0.00 ONLY_REF_SPLICE LZTS2^ENSG00000107816.17 chr10:100997234:+ PRMT1^ENSG00000126457.22 chr19:49679872:+ NO_LDAS 0.0102 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr19]"] LYSMD2--MNX1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LYSMD2^ENSG00000140280.14 chr15:51737401:- MNX1^ENSG00000130675.15 chr7:157005737:- YES_LDAS 0.0102 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr15--chr7]"] LYPLAL1--RBM26 1 0 1.00 0.00 ONLY_REF_SPLICE LYPLAL1^ENSG00000143353.12 chr1:219179246:+ RBM26^ENSG00000139746.16 chr13:79378907:- YES_LDAS 0.0102 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr13]"] LYPLA1--AC006001.3 1 0 1.00 0.00 ONLY_REF_SPLICE LYPLA1^ENSG00000120992.18 chr8:54100908:- AC006001.3^ENSG00000229180.7 chr7:66554837:- YES_LDAS 0.0102 GT 1.8062 AG 1.5219 ["INTERCHROMOSOMAL[chr8--chr7]"] LYN--STK3 1 0 1.00 0.00 ONLY_REF_SPLICE LYN^ENSG00000254087.8 chr8:55999549:+ STK3^ENSG00000104375.17 chr8:98548161:- YES_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTRACHROMOSOMAL[chr8:42.36Mb]"] LYN--IKZF2 1 0 1.00 0.00 INCL_NON_REF_SPLICE LYN^ENSG00000254087.8 chr8:55950525:+ IKZF2^ENSG00000030419.16 chr2:213056971:- YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr2]"] LY75--SLC7A1 1 0 1.00 0.00 ONLY_REF_SPLICE LY75^ENSG00000054219.11 chr2:159808449:- SLC7A1^ENSG00000139514.13 chr13:29514583:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr13]"] LY75--DCST1 1 0 0.50 0.00 INCL_NON_REF_SPLICE LY75^ENSG00000054219.11 chr2:159882149:- DCST1^ENSG00000163357.11 chr1:155035104:+ NO_LDAS 0.0051 GT 1.6729 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr1]"] LY6G5B--CSNK2B 1 0 1.00 0.00 ONLY_REF_SPLICE LY6G5B^ENSG00000240053.8 chr6:31671284:+ CSNK2B^ENSG00000204435.15 chr6:31667868:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9086 ["DGD_PARALOGS","INTRACHROMOSOMAL[chr6:0.00Mb]","NEIGHBORS_OVERLAP:+:+:[176]"] LTB4R2--IL17RC 1 0 1.00 0.00 INCL_NON_REF_SPLICE LTB4R2^ENSG00000213906.10 chr14:24310794:+ IL17RC^ENSG00000163702.20 chr3:9917133:+ NO_LDAS 0.0102 GC 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr3]"] LRRK2--TASOR 1 0 1.00 0.00 ONLY_REF_SPLICE LRRK2^ENSG00000188906.17 chr12:40243681:+ TASOR^ENSG00000163946.13 chr3:56673725:- YES_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr3]"] LRRK2--SMG1P7 1 0 1.00 0.00 ONLY_REF_SPLICE LRRK2^ENSG00000188906.17 chr12:40304134:+ SMG1P7^ENSG00000261556.10 chr16:70246610:- NO_LDAS 0.0102 GT 1.5546 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr16]"] LRRFIP2--NCAPD3 1 0 1.00 0.00 ONLY_REF_SPLICE LRRFIP2^ENSG00000093167.18 chr3:37174539:- NCAPD3^ENSG00000151503.13 chr11:134194738:- NO_LDAS 0.0102 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr11]"] LRRFIP2--ABCA6 1 0 1.00 0.00 ONLY_REF_SPLICE LRRFIP2^ENSG00000093167.18 chr3:37094792:- ABCA6^ENSG00000154262.13 chr17:69084355:- YES_LDAS 0.0102 GT 1.8256 AG 1.2310 ["INTERCHROMOSOMAL[chr3--chr17]"] LRRC69--LRP12 1 0 1.00 0.00 ONLY_REF_SPLICE LRRC69^ENSG00000214954.8 chr8:91200792:+ LRP12^ENSG00000147650.12 chr8:104509074:- YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr8:13.27Mb]"] LRRC61--PANK4 1 0 1.00 0.00 ONLY_REF_SPLICE LRRC61^ENSG00000127399.15 chr7:150326010:+ PANK4^ENSG00000157881.16 chr1:2515717:- YES_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr1]"] LRRC37B--LARS1 1 0 1.00 0.00 ONLY_REF_SPLICE LRRC37B^ENSG00000185158.12 chr17:32035639:+ LARS1^ENSG00000133706.19 chr5:146172774:- YES_LDAS 0.0102 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr5]"] LRRC37A--VNN2 1 0 0.50 0.00 ONLY_REF_SPLICE LRRC37A^ENSG00000176681.14 chr17:46294029:+ VNN2^ENSG00000112303.14 chr6:132749865:- YES_LDAS 0.0051 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr6]"] LRP8--IKBKB 1 0 1.00 0.00 ONLY_REF_SPLICE LRP8^ENSG00000157193.18 chr1:53280587:- IKBKB^ENSG00000104365.16 chr8:42319270:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr8]"] LRMDA--MAPK8 1 0 1.00 0.00 ONLY_REF_SPLICE LRMDA^ENSG00000148655.15 chr10:75438494:+ MAPK8^ENSG00000107643.16 chr10:48401612:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7232 ["INTRACHROMOSOMAL[chr10:26.99Mb]"] LRCH3--TCF25 1 0 1.00 0.00 ONLY_REF_SPLICE LRCH3^ENSG00000186001.14 chr3:197820430:+ TCF25^ENSG00000141002.20 chr16:89883351:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr16]"] LRCH1--IPO11 1 0 1.00 0.00 ONLY_REF_SPLICE LRCH1^ENSG00000136141.15 chr13:46669156:+ IPO11^ENSG00000086200.17 chr5:62627154:+ NO_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr13--chr5]"] LRCH1--DLG1 1 0 1.00 0.00 ONLY_REF_SPLICE LRCH1^ENSG00000136141.15 chr13:46553703:+ DLG1^ENSG00000075711.21 chr3:197282845:- YES_LDAS 0.0102 GT 1.8062 AG 1.5628 ["INTERCHROMOSOMAL[chr13--chr3]"] LONP1--ALG13 1 0 1.00 0.00 ONLY_REF_SPLICE LONP1^ENSG00000196365.12 chr19:5719704:- ALG13^ENSG00000101901.12 chrX:111708027:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chrX]"] LMCD1--NUCB2 1 0 1.00 0.00 ONLY_REF_SPLICE LMCD1^ENSG00000071282.12 chr3:8548903:+ NUCB2^ENSG00000070081.17 chr11:17309572:+ YES_LDAS 0.0102 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr11]"] LMBRD1--COL19A1 1 0 1.00 0.00 ONLY_REF_SPLICE LMBRD1^ENSG00000168216.13 chr6:69780494:- COL19A1^ENSG00000082293.13 chr6:70068423:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["DEEPEST2019","INTRACHROMOSOMAL[chr6:0.00Mb]","NEIGHBORS_OVERLAP:-:+:[680]"] LMAN2--NSD1 1 0 1.00 0.00 ONLY_REF_SPLICE LMAN2^ENSG00000169223.15 chr5:177351452:- NSD1^ENSG00000165671.21 chr5:177135087:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr5:0.03Mb]","LOCAL_INVERSION:-:+:[31354]"] LMAN2--CHFR 1 0 1.00 0.00 ONLY_REF_SPLICE LMAN2^ENSG00000169223.15 chr5:177334284:- CHFR^ENSG00000072609.18 chr12:132822311:- NO_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr12]"] LLGL2--LINC02210 1 0 1.00 0.00 INCL_NON_REF_SPLICE LLGL2^ENSG00000073350.14 chr17:75569131:+ LINC02210^ENSG00000204650.14 chr17:45649841:+ NO_LDAS 0.0102 GT 1.5546 AG 1.8256 ["INTRACHROMOSOMAL[chr17:29.87Mb]"] LIPE-AS1--ADAM22 1 0 1.00 0.00 ONLY_REF_SPLICE LIPE-AS1^ENSG00000213904.9 chr19:42397224:+ ADAM22^ENSG00000008277.14 chr7:88075626:+ NO_LDAS 0.0102 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr7]"] LINC02550--C10orf143 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02550^ENSG00000271584.2 chr11:111097230:- C10orf143^ENSG00000237489.5 chr10:130079901:- YES_LDAS 0.0102 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr10]"] LINC02341--PLEKHM3 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02341^ENSG00000283554.1 chr13:42437472:+ PLEKHM3^ENSG00000178385.15 chr2:207861262:- YES_LDAS 0.0102 GT 1.8892 AG 1.4295 ["INTERCHROMOSOMAL[chr13--chr2]"] LINC02021--MFN1 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02021^ENSG00000249846.7 chr3:130117092:+ MFN1^ENSG00000171109.19 chr3:179368036:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTRACHROMOSOMAL[chr3:49.15Mb]"] LINC01752--ZNF417 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01752^ENSG00000224961.3 chr20:10697579:+ ZNF417^ENSG00000173480.11 chr19:57910114:- NO_LDAS 0.0102 GT 1.9656 AG 1.2867 ["INTERCHROMOSOMAL[chr20--chr19]"] LINC01531--BRI3BP 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01531^ENSG00000205786.8 chr19:35411282:+ BRI3BP^ENSG00000184992.13 chr12:125024991:+ YES_LDAS 0.0102 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chr19--chr12]"] LINC01492--UBE2E2 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01492^ENSG00000225564.6 chr9:103188046:- UBE2E2^ENSG00000182247.10 chr3:23499608:+ NO_LDAS 0.0102 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr3]"] LINC01470--INVS 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01470^ENSG00000249484.9 chr5:152623231:- INVS^ENSG00000119509.13 chr9:100104498:+ NO_LDAS 0.0102 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr9]"] LINC01374--PCGF5 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01374^ENSG00000280560.2 chr10:89914770:+ PCGF5^ENSG00000180628.15 chr10:91271638:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8892 ["INTRACHROMOSOMAL[chr10:0.94Mb]"] LINC01356--ADNP 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01356^ENSG00000215866.8 chr1:112848954:- ADNP^ENSG00000101126.18 chr20:50904849:- NO_LDAS 0.0102 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr20]"] LINC01320--WDR43 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01320^ENSG00000228262.10 chr2:34677927:+ WDR43^ENSG00000163811.12 chr2:28906460:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr2:4.76Mb]"] LINC01278--TSN 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01278^ENSG00000235437.8 chrX:63560832:- TSN^ENSG00000211460.12 chr2:121757240:+ YES_LDAS 0.0102 GT 1.6729 AG 1.6729 ["INTERCHROMOSOMAL[chrX--chr2]"] LINC01055--CENPJ 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01055^ENSG00000235366.2 chr13:45701027:- CENPJ^ENSG00000151849.16 chr13:24912069:- YES_LDAS 0.0102 GT 1.8295 AG 1.7232 ["INTRACHROMOSOMAL[chr13:20.76Mb]"] LINC00996--MTHFR 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00996^ENSG00000242258.1 chr7:150443160:+ MTHFR^ENSG00000177000.13 chr1:11796399:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr1]"] LINC00598--FOXO1 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00598^ENSG00000215483.11 chr13:40535666:- FOXO1^ENSG00000150907.10 chr13:40560860:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr13:0.02Mb]","LOCAL_REARRANGEMENT:-:[19860]"] LINC00513--KDM5C 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00513^ENSG00000233559.2 chr7:130928238:+ KDM5C^ENSG00000126012.12 chrX:53193167:- NO_LDAS 0.0102 GT 1.3383 AG 1.5329 ["INTERCHROMOSOMAL[chr7--chrX]"] LINC00278--TRMT11 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00278^ENSG00000231535.7 chrY:3003217:+ TRMT11^ENSG00000066651.20 chr6:125993757:+ NO_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chrY--chr6]"] LINC00278--RACGAP1 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00278^ENSG00000231535.7 chrY:3003217:+ RACGAP1^ENSG00000161800.13 chr12:50016719:- YES_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chrY--chr12]"] LINC00278--GTPBP10 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00278^ENSG00000231535.7 chrY:3102194:+ GTPBP10^ENSG00000105793.16 chr7:90372155:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9899 ["INTERCHROMOSOMAL[chrY--chr7]"] LINC-PINT--ZNF800 1 0 1.00 0.00 ONLY_REF_SPLICE LINC-PINT^ENSG00000231721.7 chr7:130945720:- ZNF800^ENSG00000048405.10 chr7:127377329:- YES_LDAS 0.0102 GT 1.9656 AG 1.6729 ["INTRACHROMOSOMAL[chr7:3.51Mb]"] LIN7C--CKAP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE LIN7C^ENSG00000148943.12 chr11:27498745:- CKAP2^ENSG00000136108.15 chr13:52461674:+ YES_LDAS 0.0102 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr13]"] LIMS1--RMND5A 1 0 1.00 0.00 ONLY_REF_SPLICE LIMS1^ENSG00000169756.16 chr2:108534594:+ RMND5A^ENSG00000153561.13 chr2:86740927:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr2:21.76Mb]"] LILRB1--SRP68 1 0 1.00 0.00 ONLY_REF_SPLICE LILRB1^ENSG00000104972.15 chr19:54617349:+ SRP68^ENSG00000167881.15 chr17:76070444:- NO_LDAS 0.0102 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr19--chr17]"] LIAS--ABCB9 1 0 0.50 0.00 INCL_NON_REF_SPLICE LIAS^ENSG00000121897.15 chr4:39460816:+ ABCB9^ENSG00000150967.18 chr12:122950726:- NO_LDAS 0.0051 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr4--chr12]"] LHFPL2--IQGAP2 1 0 1.00 0.00 ONLY_REF_SPLICE LHFPL2^ENSG00000145685.14 chr5:78648499:- IQGAP2^ENSG00000145703.16 chr5:76461570:+ YES_LDAS 0.0102 GT 1.5329 AG 1.9086 ["INTRACHROMOSOMAL[chr5:1.78Mb]"] LENG8--DDX23 1 0 1.00 0.00 ONLY_REF_SPLICE LENG8^ENSG00000167615.17 chr19:54458521:+ DDX23^ENSG00000174243.10 chr12:48831316:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr12]"] LENG8--CCDC61 1 0 1.00 0.00 ONLY_REF_SPLICE LENG8^ENSG00000167615.17 chr19:54458521:+ CCDC61^ENSG00000104983.8 chr19:46016694:+ YES_LDAS 0.0102 GT 1.8892 AG 1.5656 ["INTRACHROMOSOMAL[chr19:8.43Mb]"] LDLRAD4--UBAP2 1 0 1.00 0.00 ONLY_REF_SPLICE LDLRAD4^ENSG00000168675.19 chr18:13465111:+ UBAP2^ENSG00000137073.23 chr9:33948587:- NO_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr18--chr9]"] LDLR--SRM 1 0 1.00 0.00 ONLY_REF_SPLICE LDLR^ENSG00000130164.14 chr19:11113762:+ SRM^ENSG00000116649.10 chr1:11055084:- YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr1]"] LDLR--DENND1C 1 0 1.00 0.00 ONLY_REF_SPLICE LDLR^ENSG00000130164.14 chr19:11089615:+ DENND1C^ENSG00000205744.10 chr19:6470366:- YES_LDAS 0.0102 GT 1.6402 AG 1.8295 ["INTRACHROMOSOMAL[chr19:4.61Mb]"] LCLAT1--DPY30 1 0 0.50 0.00 ONLY_REF_SPLICE LCLAT1^ENSG00000172954.14 chr2:30447383:+ DPY30^ENSG00000162961.14 chr2:31943383:- YES_LDAS 0.0051 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr2:1.22Mb]"] LATS1--GPR89A 1 0 0.50 0.00 ONLY_REF_SPLICE LATS1^ENSG00000131023.13 chr6:149676260:- GPR89A^ENSG00000117262.19 chr1:145663329:+ YES_LDAS 0.0051 GT 1.5546 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr1]"] LAT--RAC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE LAT^ENSG00000213658.12 chr16:28989593:+ RAC2^ENSG00000128340.15 chr22:37231282:- NO_LDAS 0.0102 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr16--chr22]"] LARS1--AC005153.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LARS1^ENSG00000133706.19 chr5:146153936:- AC005153.1^ENSG00000286658.1 chr7:50642910:+ NO_LDAS 0.0102 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr5--chr7]"] LARP4B--PFKP 1 0 1.00 0.00 ONLY_REF_SPLICE LARP4B^ENSG00000107929.15 chr10:931428:- PFKP^ENSG00000067057.18 chr10:3099275:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr10:2.13Mb]"] LARP4--COPZ1 1 0 1.00 0.00 ONLY_REF_SPLICE LARP4^ENSG00000161813.22 chr12:50401028:+ COPZ1^ENSG00000111481.10 chr12:54345460:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr12:3.82Mb]"] LARP1B--VPS33A 1 0 1.00 0.00 ONLY_REF_SPLICE LARP1B^ENSG00000138709.19 chr4:128077962:+ VPS33A^ENSG00000139719.11 chr12:122232968:- YES_LDAS 0.0102 GT 1.7968 AG 1.7056 ["INTERCHROMOSOMAL[chr4--chr12]"] LARGE1--CYB5D2 1 0 1.00 0.00 ONLY_REF_SPLICE LARGE1^ENSG00000133424.22 chr22:33564848:- CYB5D2^ENSG00000167740.10 chr17:4149891:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr22--chr17]"] LAMTOR5--MYLK 1 0 1.00 0.00 INCL_NON_REF_SPLICE LAMTOR5^ENSG00000134248.14 chr1:110403940:- MYLK^ENSG00000065534.19 chr3:123616766:- NO_LDAS 0.0102 GT 1.7968 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr3]"] LAMP1--AC233699.1 1 0 0.25 0.00 INCL_NON_REF_SPLICE LAMP1^ENSG00000185896.11 chr13:113320470:+ AC233699.1^ENSG00000261499.2 chr17:36274199:+ YES_LDAS 0.0025 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr13--chr17]"] LAG3--CYREN 1 0 0.50 0.00 INCL_NON_REF_SPLICE LAG3^ENSG00000089692.9 chr12:6778427:+ CYREN^ENSG00000122783.17 chr7:135094373:- NO_LDAS 0.0051 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr7]"] LAG3--CDKL5 1 0 0.50 0.00 INCL_NON_REF_SPLICE LAG3^ENSG00000089692.9 chr12:6778427:+ CDKL5^ENSG00000008086.13 chrX:18604238:+ NO_LDAS 0.0051 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chrX]"] LACTB--EIF3E 1 0 1.00 0.00 ONLY_REF_SPLICE LACTB^ENSG00000103642.12 chr15:63129650:+ EIF3E^ENSG00000104408.11 chr8:108203503:- NO_LDAS 0.0102 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr8]"] L3MBTL2--KLC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE L3MBTL2^ENSG00000100395.15 chr22:41205309:+ KLC1^ENSG00000126214.21 chr14:103684986:+ NO_LDAS 0.0102 GC 1.3710 AG 1.3996 ["INTERCHROMOSOMAL[chr22--chr14]"] L2HGDH--ACTR3B 1 0 1.00 0.00 ONLY_REF_SPLICE L2HGDH^ENSG00000087299.12 chr14:50312011:- ACTR3B^ENSG00000133627.18 chr7:152852126:+ YES_LDAS 0.0102 GT 1.5301 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr7]"] KYNU--ARHGAP15 1 0 1.00 0.00 ONLY_REF_SPLICE KYNU^ENSG00000115919.15 chr2:142986021:+ ARHGAP15^ENSG00000075884.14 chr2:143155477:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7968 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr2:0.04Mb]","NEIGHBORS[35529]"] KYAT3--ZNF451 1 0 1.00 0.00 ONLY_REF_SPLICE KYAT3^ENSG00000137944.18 chr1:88968670:- ZNF451^ENSG00000112200.17 chr6:57168423:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr1--chr6]"] KXD1--INTS10 1 0 1.00 0.00 ONLY_REF_SPLICE KXD1^ENSG00000105700.11 chr19:18557914:+ INTS10^ENSG00000104613.12 chr8:19823301:+ YES_LDAS 0.0102 GT 1.9086 AG 1.6729 ["INTERCHROMOSOMAL[chr19--chr8]"] KRT10--IL4I1 1 0 1.00 0.00 ONLY_REF_SPLICE KRT10^ENSG00000186395.9 chr17:40818787:- IL4I1^ENSG00000104951.16 chr19:49927815:- YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr19]"] KRI1--LENG8-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE KRI1^ENSG00000129347.21 chr19:10559359:- LENG8-AS1^ENSG00000226696.6 chr19:54445179:- YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr19:43.88Mb]"] KPNA6--TXLNG 1 0 0.50 0.00 INCL_NON_REF_SPLICE KPNA6^ENSG00000025800.14 chr1:32163313:+ TXLNG^ENSG00000086712.13 chrX:16834265:+ YES_LDAS 0.0051 GT 1.7819 AG 1.6049 ["INTERCHROMOSOMAL[chr1--chrX]"] KPNA5--ZNF296 1 0 1.00 0.00 INCL_NON_REF_SPLICE KPNA5^ENSG00000196911.11 chr6:116722245:+ ZNF296^ENSG00000170684.9 chr19:45071690:- YES_LDAS 0.0102 GT 1.7232 AG 1.7232 ["INTERCHROMOSOMAL[chr6--chr19]"] KNL1--RSPO3 1 0 1.00 0.00 INCL_NON_REF_SPLICE KNL1^ENSG00000137812.20 chr15:40652105:+ RSPO3^ENSG00000146374.14 chr6:127119005:+ NO_LDAS 0.0102 GT 1.8256 AG 1.5058 ["INTERCHROMOSOMAL[chr15--chr6]"] KLHL5--RNF20 1 0 1.00 0.00 ONLY_REF_SPLICE KLHL5^ENSG00000109790.17 chr4:39081239:+ RNF20^ENSG00000155827.12 chr9:101544767:+ NO_LDAS 0.0102 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr9]"] KLHL23--CEP128 1 0 1.00 0.00 ONLY_REF_SPLICE KLHL23^ENSG00000213160.10 chr2:169695247:+ CEP128^ENSG00000100629.17 chr14:80778046:- YES_LDAS 0.0102 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr14]"] KLHL18--OVOL2 1 0 1.00 0.00 ONLY_REF_SPLICE KLHL18^ENSG00000114648.12 chr3:47283094:+ OVOL2^ENSG00000125850.11 chr20:17957037:- YES_LDAS 0.0102 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr3--chr20]"] KLHL18--MEF2C 1 0 1.00 0.00 ONLY_REF_SPLICE KLHL18^ENSG00000114648.12 chr3:47283094:+ MEF2C^ENSG00000081189.16 chr5:88804801:- YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr5]"] KLC1--ELOB 1 0 1.00 0.00 INCL_NON_REF_SPLICE KLC1^ENSG00000126214.21 chr14:103629273:+ ELOB^ENSG00000103363.15 chr16:2777251:- NO_LDAS 0.0102 GT 1.5301 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr16]"] KLB--GGH 1 0 1.00 0.00 ONLY_REF_SPLICE KLB^ENSG00000134962.7 chr4:39437995:+ GGH^ENSG00000137563.13 chr8:63017183:- NO_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr4--chr8]"] KIF5B--PSMC1 1 0 1.00 0.00 ONLY_REF_SPLICE KIF5B^ENSG00000170759.11 chr10:32015509:- PSMC1^ENSG00000100764.14 chr14:90263318:+ YES_LDAS 0.0102 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr14]"] KIF4A--ITGA4 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIF4A^ENSG00000090889.12 chrX:70420458:+ ITGA4^ENSG00000115232.14 chr2:181527367:+ NO_LDAS 0.0102 GT 1.8256 AG 1.6402 ["INTERCHROMOSOMAL[chrX--chr2]"] KIF3A--MYO1E 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIF3A^ENSG00000131437.16 chr5:132695461:- MYO1E^ENSG00000157483.9 chr15:59172067:- YES_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr15]"] KIF2A--SENP6 1 0 1.00 0.00 ONLY_REF_SPLICE KIF2A^ENSG00000068796.19 chr5:62306536:+ SENP6^ENSG00000112701.18 chr6:75659262:+ NO_LDAS 0.0102 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr5--chr6]"] KIF2A--GOLPH3 1 0 1.00 0.00 ONLY_REF_SPLICE KIF2A^ENSG00000068796.19 chr5:62306536:+ GOLPH3^ENSG00000113384.14 chr5:32143880:- NO_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr5:30.13Mb]"] KIF20B--DMGDH 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIF20B^ENSG00000138182.15 chr10:89762835:+ DMGDH^ENSG00000132837.15 chr5:79021360:- NO_LDAS 0.0102 GT 1.4295 AG 1.6895 ["INTERCHROMOSOMAL[chr10--chr5]"] KIF1C--PTPRM 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIF1C^ENSG00000129250.12 chr17:5022518:+ PTPRM^ENSG00000173482.17 chr18:8406121:+ NO_LDAS 0.0102 GT 1.2310 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr18]"] KIF18A--UBE2D2 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIF18A^ENSG00000121621.7 chr11:28097623:- UBE2D2^ENSG00000131508.16 chr5:139600408:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr5]"] KIF15--FOXP1 1 0 1.00 0.00 ONLY_REF_SPLICE KIF15^ENSG00000163808.17 chr3:44761884:+ FOXP1^ENSG00000114861.23 chr3:71359244:- YES_LDAS 0.0102 GT 1.7819 AG 1.5058 ["INTRACHROMOSOMAL[chr3:26.08Mb]"] KIAA1958--SNX30 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA1958^ENSG00000165185.15 chr9:112575251:+ SNX30^ENSG00000148158.17 chr9:112804776:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["Klijn_CellLines","ChimerSeq","INTRACHROMOSOMAL[chr9:0.08Mb]","NEIGHBORS[81363]"] KIAA1958--KDM4C 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA1958^ENSG00000165185.15 chr9:112575251:+ KDM4C^ENSG00000107077.19 chr9:7046862:+ NO_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr9:105.31Mb]"] KIAA1586--RPS29 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA1586^ENSG00000168116.14 chr6:57050854:+ RPS29^ENSG00000213741.11 chr14:49577853:- YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr14]"] KIAA1549--MEX3A 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIAA1549^ENSG00000122778.10 chr7:138917215:- MEX3A^ENSG00000254726.3 chr1:156076341:- NO_LDAS 0.0102 GT 1.8295 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr1]"] KIAA1549--IKZF1 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA1549^ENSG00000122778.10 chr7:138981083:- IKZF1^ENSG00000185811.19 chr7:50399918:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8295 ["INTRACHROMOSOMAL[chr7:88.43Mb]"] KIAA1549--CHCHD3 1 0 0.50 0.00 ONLY_REF_SPLICE KIAA1549^ENSG00000122778.10 chr7:138981083:- CHCHD3^ENSG00000106554.13 chr7:133024627:- YES_LDAS 0.0051 GT 1.6402 AG 1.7819 ["INTRACHROMOSOMAL[chr7:5.75Mb]"] KIAA1191--MAML1 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA1191^ENSG00000122203.15 chr5:176361602:- MAML1^ENSG00000161021.13 chr5:179765326:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8256 ["INTRACHROMOSOMAL[chr5:3.37Mb]"] KHSRP--XPO6 1 0 1.00 0.00 ONLY_REF_SPLICE KHSRP^ENSG00000088247.18 chr19:6416738:- XPO6^ENSG00000169180.12 chr16:28169909:- YES_LDAS 0.0102 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr16]"] KHDC4--CDK11B 1 0 1.00 0.00 ONLY_REF_SPLICE KHDC4^ENSG00000132680.11 chr1:155929296:- CDK11B^ENSG00000248333.9 chr1:1652566:- YES_LDAS 0.0102 GT 1.7819 AG 1.2729 ["INTRACHROMOSOMAL[chr1:154.25Mb]"] KDM5B--KIF14 1 0 1.00 0.00 ONLY_REF_SPLICE KDM5B^ENSG00000117139.18 chr1:202773118:- KIF14^ENSG00000118193.12 chr1:200581294:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr1:2.10Mb]"] KDM4C--LARP4 1 0 1.00 0.00 ONLY_REF_SPLICE KDM4C^ENSG00000107077.19 chr9:7049200:+ LARP4^ENSG00000161813.22 chr12:50461135:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr12]"] KDM4C--IL15 1 0 1.00 0.00 ONLY_REF_SPLICE KDM4C^ENSG00000107077.19 chr9:6981118:+ IL15^ENSG00000164136.17 chr4:141656186:+ YES_LDAS 0.0102 GT 1.7465 AG 1.5656 ["INTERCHROMOSOMAL[chr9--chr4]"] KDM2B--ORAI1 1 0 1.00 0.00 ONLY_REF_SPLICE KDM2B^ENSG00000089094.19 chr12:121494579:- ORAI1^ENSG00000276045.3 chr12:121641041:+ YES_LDAS 0.0102 GT 1.6729 AG 1.6729 ["TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr12:0.05Mb]","LOCAL_INVERSION:-:+:[45527]"] KDM2A--OVOL2 1 0 1.00 0.00 ONLY_REF_SPLICE KDM2A^ENSG00000173120.15 chr11:67121358:+ OVOL2^ENSG00000125850.11 chr20:17957037:- NO_LDAS 0.0102 GT 1.9656 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr20]"] KDM2A--NAA60 1 0 1.00 0.00 ONLY_REF_SPLICE KDM2A^ENSG00000173120.15 chr11:67121358:+ NAA60^ENSG00000122390.19 chr16:3476222:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr16]"] KDM2A--KCNJ2 1 0 1.00 0.00 INCL_NON_REF_SPLICE KDM2A^ENSG00000173120.15 chr11:67219303:+ KCNJ2^ENSG00000123700.5 chr17:70177658:+ NO_LDAS 0.0102 GT 1.8892 AG 1.4295 ["INTERCHROMOSOMAL[chr11--chr17]"] KCTD20--ACAP2 1 0 1.00 0.00 ONLY_REF_SPLICE KCTD20^ENSG00000112078.14 chr6:36475062:+ ACAP2^ENSG00000114331.15 chr3:195392147:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr3]"] KCNQ5--KDM4C 1 0 1.00 0.00 ONLY_REF_SPLICE KCNQ5^ENSG00000185760.17 chr6:72622587:+ KDM4C^ENSG00000107077.19 chr9:6849507:+ YES_LDAS 0.0102 GT 1.8323 AG 1.4566 ["INTERCHROMOSOMAL[chr6--chr9]"] KCNN4--GTPBP6 1 0 1.00 0.00 INCL_NON_REF_SPLICE KCNN4^ENSG00000104783.14 chr19:43766688:- GTPBP6^ENSG00000178605.13 chrX:307380:- NO_LDAS 0.0102 GT 1.8323 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chrX]"] KCNH5--MN1 1 0 0.50 0.00 INCL_NON_REF_SPLICE KCNH5^ENSG00000140015.20 chr14:62950140:- MN1^ENSG00000169184.6 chr22:27798953:- NO_LDAS 0.0051 GT 1.7819 AG 1.5656 ["INTERCHROMOSOMAL[chr14--chr22]"] KCNC4--YBX1 1 0 1.00 0.00 ONLY_REF_SPLICE KCNC4^ENSG00000116396.15 chr1:110212177:+ YBX1^ENSG00000065978.19 chr1:42693490:+ NO_LDAS 0.0102 GT 1.7056 AG 1.7465 ["INTRACHROMOSOMAL[chr1:67.51Mb]"] KCNAB2--TMCO4 1 0 1.00 0.00 ONLY_REF_SPLICE KCNAB2^ENSG00000069424.15 chr1:6041872:+ TMCO4^ENSG00000162542.14 chr1:19787117:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr1:13.58Mb]"] KCNAB2--NPHP4 1 0 1.00 0.00 ONLY_REF_SPLICE KCNAB2^ENSG00000069424.15 chr1:6090475:+ NPHP4^ENSG00000131697.18 chr1:5978413:- YES_LDAS 0.0102 GT 1.8256 AG 1.7232 ["DEEPEST2019","INTRACHROMOSOMAL[chr1:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[1546]"] KCNAB2--GTDC1 1 0 1.00 0.00 ONLY_REF_SPLICE KCNAB2^ENSG00000069424.15 chr1:6041872:+ GTDC1^ENSG00000121964.14 chr2:144007535:- NO_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr2]"] KCNAB1--LILRB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE KCNAB1^ENSG00000169282.18 chr3:156515189:+ LILRB1^ENSG00000104972.15 chr19:54635259:+ NO_LDAS 0.0102 GT 1.2867 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr19]"] KATNIP--TSC1 1 0 1.00 0.00 ONLY_REF_SPLICE KATNIP^ENSG00000047578.13 chr16:27777029:+ TSC1^ENSG00000165699.15 chr9:132900837:- YES_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr9]"] KATNIP--IL4R 1 0 1.00 0.00 ONLY_REF_SPLICE KATNIP^ENSG00000047578.13 chr16:27751924:+ IL4R^ENSG00000077238.14 chr16:27340186:+ NO_LDAS 0.0102 GT 1.7232 AG 1.8256 ["INTRACHROMOSOMAL[chr16:0.19Mb]"] KAT6B--ERGIC1 1 0 1.00 0.00 ONLY_REF_SPLICE KAT6B^ENSG00000156650.14 chr10:74843478:+ ERGIC1^ENSG00000113719.16 chr5:172932436:+ YES_LDAS 0.0102 GT 1.7465 AG 1.5546 ["INTERCHROMOSOMAL[chr10--chr5]"] KAT6B--ADK 1 0 1.00 0.00 ONLY_REF_SPLICE KAT6B^ENSG00000156650.14 chr10:74989112:+ ADK^ENSG00000156110.15 chr10:74708321:+ YES_LDAS 0.0102 GT 1.6729 AG 1.7968 ["YOSHIHARA_TCGA","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr10:0.11Mb]"] KAT6B--ADK 1 0 1.00 0.00 ONLY_REF_SPLICE KAT6B^ENSG00000156650.14 chr10:74843478:+ ADK^ENSG00000156110.15 chr10:74314667:+ YES_LDAS 0.0102 GT 1.7465 AG 1.7465 ["YOSHIHARA_TCGA","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr10:0.11Mb]"] JUND--CCDC13 1 0 1.00 0.00 INCL_NON_REF_SPLICE JUND^ENSG00000130522.6 chr19:18280504:- CCDC13^ENSG00000244607.7 chr3:42739711:- NO_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr3]"] JOSD1--HMGB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE JOSD1^ENSG00000100221.10 chr22:38687405:- HMGB1^ENSG00000189403.15 chr13:30463656:- YES_LDAS 0.0102 GC 1.7056 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr13]"] JMJD1C--HNRNPH3 1 0 1.00 0.00 ONLY_REF_SPLICE JMJD1C^ENSG00000171988.19 chr10:63206595:- HNRNPH3^ENSG00000096746.18 chr10:68339140:+ YES_LDAS 0.0102 GT 1.6049 AG 1.4295 ["INTRACHROMOSOMAL[chr10:4.81Mb]"] JAZF1--IKZF1 1 0 1.00 0.00 ONLY_REF_SPLICE JAZF1^ENSG00000153814.13 chr7:28180463:- IKZF1^ENSG00000185811.19 chr7:50319048:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr7:22.12Mb]"] JAZF1--HDAC9 1 0 1.00 0.00 ONLY_REF_SPLICE JAZF1^ENSG00000153814.13 chr7:28180463:- HDAC9^ENSG00000048052.23 chr7:18585281:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTRACHROMOSOMAL[chr7:8.83Mb]"] JAK1--MIER1 1 0 1.00 0.00 ONLY_REF_SPLICE JAK1^ENSG00000162434.13 chr1:64966333:- MIER1^ENSG00000198160.15 chr1:66940028:+ NO_LDAS 0.0102 GT 1.8062 AG 1.8892 ["INTRACHROMOSOMAL[chr1:1.86Mb]"] ITSN2--CCDC198 1 0 1.00 0.00 ONLY_REF_SPLICE ITSN2^ENSG00000198399.15 chr2:24254367:- CCDC198^ENSG00000100557.10 chr14:57483151:- NO_LDAS 0.0102 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr14]"] ITPR3--HMGN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ITPR3^ENSG00000096433.11 chr6:33676932:+ HMGN1^ENSG00000205581.11 chr21:39348445:- NO_LDAS 0.0102 GT 1.2310 AG 1.6729 ["INTERCHROMOSOMAL[chr6--chr21]"] ITPR3--C1RL-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE ITPR3^ENSG00000096433.11 chr6:33691928:+ C1RL-AS1^ENSG00000205885.7 chr12:7110298:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr12]"] ITPR1--ERCC5 1 0 1.00 0.00 ONLY_REF_SPLICE ITPR1^ENSG00000150995.20 chr3:4521094:+ ERCC5^ENSG00000134899.23 chr13:102861507:+ YES_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr13]"] ITPA--QDPR 1 0 1.00 0.00 INCL_NON_REF_SPLICE ITPA^ENSG00000125877.13 chr20:3218538:+ QDPR^ENSG00000151552.12 chr4:17486890:- NO_LDAS 0.0102 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr20--chr4]"] ITGB2--NACC1 1 0 1.00 0.00 ONLY_REF_SPLICE ITGB2^ENSG00000160255.18 chr21:44920821:- NACC1^ENSG00000160877.6 chr19:13135200:+ NO_LDAS 0.0102 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr21--chr19]"] ITGA4--TERF2 1 0 1.00 0.00 ONLY_REF_SPLICE ITGA4^ENSG00000115232.14 chr2:181485992:+ TERF2^ENSG00000132604.11 chr16:69361489:- YES_LDAS 0.0102 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr16]"] ITGA4--HBS1L 1 0 1.00 0.00 ONLY_REF_SPLICE ITGA4^ENSG00000115232.14 chr2:181485992:+ HBS1L^ENSG00000112339.15 chr6:135002842:- YES_LDAS 0.0102 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr6]"] ITCH--AC107223.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ITCH^ENSG00000078747.16 chr20:34492601:+ AC107223.1^ENSG00000251600.8 chr4:143559814:+ NO_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr20--chr4]"] ISG20L2--GATAD2B 1 0 1.00 0.00 ONLY_REF_SPLICE ISG20L2^ENSG00000143319.17 chr1:156724148:- GATAD2B^ENSG00000143614.10 chr1:153828348:- YES_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTRACHROMOSOMAL[chr1:2.80Mb]"] ISG20--MBOAT7 1 0 1.00 0.00 ONLY_REF_SPLICE ISG20^ENSG00000172183.16 chr15:88639594:+ MBOAT7^ENSG00000125505.17 chr19:54174431:- YES_LDAS 0.0102 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr19]"] IRF3--COPE 1 0 1.00 0.00 ONLY_REF_SPLICE IRF3^ENSG00000126456.16 chr19:49664674:- COPE^ENSG00000105669.14 chr19:18900449:- NO_LDAS 0.0102 GT 1.9656 AG 1.9899 ["INTRACHROMOSOMAL[chr19:30.74Mb]"] IRF2--AL049872.1 1 0 0.14 0.00 INCL_NON_REF_SPLICE IRF2^ENSG00000168310.11 chr4:184474379:- AL049872.1^ENSG00000259020.3 chr14:92026611:+ YES_LDAS 0.0014 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr4--chr14]"] IRF1-AS1--ERGIC1 1 0 1.00 0.00 ONLY_REF_SPLICE IRF1-AS1^ENSG00000197536.11 chr5:132449689:+ ERGIC1^ENSG00000113719.16 chr5:172888699:+ YES_LDAS 0.0102 GT 1.4566 AG 1.9656 ["INTRACHROMOSOMAL[chr5:40.35Mb]"] IREB2--TMEM181 1 0 1.00 0.00 ONLY_REF_SPLICE IREB2^ENSG00000136381.13 chr15:78488771:+ TMEM181^ENSG00000146433.9 chr6:158573420:+ YES_LDAS 0.0102 GT 1.1033 AG 1.7056 ["INTERCHROMOSOMAL[chr15--chr6]"] IRAK1--SLC29A1 1 0 1.00 0.00 ONLY_REF_SPLICE IRAK1^ENSG00000184216.14 chrX:154016032:- SLC29A1^ENSG00000112759.19 chr6:44230347:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chrX--chr6]"] IQGAP3--TMEM265 1 0 1.00 0.00 ONLY_REF_SPLICE IQGAP3^ENSG00000183856.11 chr1:156550261:- TMEM265^ENSG00000281991.2 chr16:30741741:+ YES_LDAS 0.0102 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr16]"] IQGAP1--METAP1 1 0 1.00 0.00 ONLY_REF_SPLICE IQGAP1^ENSG00000140575.13 chr15:90456315:+ METAP1^ENSG00000164024.12 chr4:99041043:+ YES_LDAS 0.0102 GT 1.5058 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr4]"] IPO8--TDRD3 1 0 1.00 0.00 ONLY_REF_SPLICE IPO8^ENSG00000133704.10 chr12:30670962:- TDRD3^ENSG00000083544.16 chr13:60439688:+ NO_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr13]"] IPO7--UGP2 1 0 0.50 0.00 INCL_NON_REF_SPLICE IPO7^ENSG00000205339.10 chr11:9423019:+ UGP2^ENSG00000169764.16 chr2:63887994:+ NO_LDAS 0.0051 GT 1.5058 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr2]"] IPO7--RAB11FIP1 1 0 1.00 0.00 ONLY_REF_SPLICE IPO7^ENSG00000205339.10 chr11:9410086:+ RAB11FIP1^ENSG00000156675.16 chr8:37870528:- YES_LDAS 0.0102 GT 1.5058 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr8]"] IPCEF1--SEC14L1 1 0 1.00 0.00 ONLY_REF_SPLICE IPCEF1^ENSG00000074706.13 chr6:154199668:- SEC14L1^ENSG00000129657.16 chr17:77190803:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr17]"] IP6K2--LRRK2 1 0 1.00 0.00 ONLY_REF_SPLICE IP6K2^ENSG00000068745.15 chr3:48695090:- LRRK2^ENSG00000188906.17 chr12:40251232:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr12]"] IP6K1--SHISA5 1 0 1.00 0.00 ONLY_REF_SPLICE IP6K1^ENSG00000176095.12 chr3:49786354:- SHISA5^ENSG00000164054.15 chr3:48479257:- YES_LDAS 0.0102 GT 1.2729 AG 1.8256 ["INTRACHROMOSOMAL[chr3:1.22Mb]"] INVS--STX17 1 0 1.00 0.00 ONLY_REF_SPLICE INVS^ENSG00000119509.13 chr9:100126549:+ STX17^ENSG00000136874.11 chr9:99915178:+ YES_LDAS 0.0102 GT 1.9329 AG 1.6729 ["INTRACHROMOSOMAL[chr9:0.12Mb]"] INVS--ENOSF1 1 0 1.00 0.00 ONLY_REF_SPLICE INVS^ENSG00000119509.13 chr9:100099416:+ ENOSF1^ENSG00000132199.20 chr18:706578:- YES_LDAS 0.0102 GT 1.5546 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr18]"] INTS9-AS1--WDR37 1 0 1.00 0.00 ONLY_REF_SPLICE INTS9-AS1^ENSG00000254034.2 chr8:28798641:+ WDR37^ENSG00000047056.16 chr10:1080011:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr8--chr10]"] INTS6--NAA16 1 0 1.00 0.00 ONLY_REF_SPLICE INTS6^ENSG00000102786.15 chr13:51389319:- NAA16^ENSG00000172766.19 chr13:41374742:+ NO_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr13:9.98Mb]"] INTS6--EIF2S1 1 0 1.00 0.00 ONLY_REF_SPLICE INTS6^ENSG00000102786.15 chr13:51451025:- EIF2S1^ENSG00000134001.15 chr14:67380659:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTERCHROMOSOMAL[chr13--chr14]"] INTS6--ABCC4 1 0 1.00 0.00 ONLY_REF_SPLICE INTS6^ENSG00000102786.15 chr13:51430294:- ABCC4^ENSG00000125257.16 chr13:95021682:- YES_LDAS 0.0102 GT 1.7968 AG 1.7968 ["INTRACHROMOSOMAL[chr13:43.57Mb]"] INTS4--MYO6 1 0 1.00 0.00 ONLY_REF_SPLICE INTS4^ENSG00000149262.17 chr11:77978996:- MYO6^ENSG00000196586.16 chr6:75817501:+ YES_LDAS 0.0102 GT 1.9219 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr6]"] INTS3--BLNK 1 0 1.00 0.00 ONLY_REF_SPLICE INTS3^ENSG00000143624.14 chr1:153748755:+ BLNK^ENSG00000095585.17 chr10:96223989:- YES_LDAS 0.0102 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr10]"] INTS3--ACSL1 1 0 1.00 0.00 ONLY_REF_SPLICE INTS3^ENSG00000143624.14 chr1:153751239:+ ACSL1^ENSG00000151726.15 chr4:184768450:- YES_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr4]"] INTS11--SCOC 1 0 0.50 0.00 INCL_NON_REF_SPLICE INTS11^ENSG00000127054.21 chr1:1314480:- SCOC^ENSG00000153130.18 chr4:140373578:+ NO_LDAS 0.0051 GC 1.5329 AG 1.7232 ["INTERCHROMOSOMAL[chr1--chr4]"] INTS10--XPOT 1 0 1.00 0.00 ONLY_REF_SPLICE INTS10^ENSG00000104613.12 chr8:19818342:+ XPOT^ENSG00000184575.12 chr12:64423005:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr12]"] INSR--TBL1X 1 0 1.00 0.00 INCL_NON_REF_SPLICE INSR^ENSG00000171105.14 chr19:7116697:- TBL1X^ENSG00000101849.17 chrX:9645116:+ NO_LDAS 0.0102 GT 0.9056 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chrX]"] INPP4A--S100PBP 1 0 1.00 0.00 ONLY_REF_SPLICE INPP4A^ENSG00000040933.16 chr2:98577143:+ S100PBP^ENSG00000116497.18 chr1:32825313:+ YES_LDAS 0.0102 GT 1.8295 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr1]"] INO80D--FDFT1 1 0 1.00 0.00 ONLY_REF_SPLICE INO80D^ENSG00000114933.16 chr2:206085901:- FDFT1^ENSG00000079459.13 chr8:11808794:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr8]"] INO80C--GMEB2 1 0 1.00 0.00 INCL_NON_REF_SPLICE INO80C^ENSG00000153391.16 chr18:35452809:- GMEB2^ENSG00000101216.11 chr20:63619320:- NO_LDAS 0.0102 GT 1.5656 AG 1.1589 ["INTERCHROMOSOMAL[chr18--chr20]"] ING5--ATG4B 1 0 1.00 0.00 ONLY_REF_SPLICE ING5^ENSG00000168395.16 chr2:241688062:+ ATG4B^ENSG00000168397.17 chr2:241654546:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["DEEPEST2019","INTRACHROMOSOMAL[chr2:0.01Mb]","LOCAL_REARRANGEMENT:+:[13228]"] ING3--IVNS1ABP 1 0 1.00 0.00 ONLY_REF_SPLICE ING3^ENSG00000071243.16 chr7:120955624:+ IVNS1ABP^ENSG00000116679.16 chr1:185305643:- YES_LDAS 0.0102 GT 1.9086 AG 1.9329 ["Klijn_CellLines","ChimerSeq","INTERCHROMOSOMAL[chr7--chr1]"] INAVA--CRYGD 1 0 0.50 0.00 INCL_NON_REF_SPLICE INAVA^ENSG00000163362.11 chr1:200911555:+ CRYGD^ENSG00000118231.5 chr2:208124518:- NO_LDAS 0.0051 GC 1.7056 AG 1.0530 ["INTERCHROMOSOMAL[chr1--chr2]"] IMMP1L--FAF1 1 0 1.00 0.00 ONLY_REF_SPLICE IMMP1L^ENSG00000148950.11 chr11:31509519:- FAF1^ENSG00000185104.20 chr1:50744775:- YES_LDAS 0.0102 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr1]"] IL19--PTENP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IL19^ENSG00000142224.17 chr1:206771078:+ PTENP1^ENSG00000237984.3 chr9:33676487:- YES_LDAS 0.0102 GT 1.5058 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr9]"] IL15RA--FBH1 1 0 1.00 0.00 ONLY_REF_SPLICE IL15RA^ENSG00000134470.21 chr10:5966145:- FBH1^ENSG00000134452.20 chr10:5927435:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr10:0.01Mb]","LOCAL_INVERSION:-:+:[6045]"] IKZF3--BBX 1 0 1.00 0.00 ONLY_REF_SPLICE IKZF3^ENSG00000161405.17 chr17:39788258:- BBX^ENSG00000114439.19 chr3:107728765:+ YES_LDAS 0.0102 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr3]"] IKZF2--TBC1D5 1 0 1.00 0.00 ONLY_REF_SPLICE IKZF2^ENSG00000030419.16 chr2:213147708:- TBC1D5^ENSG00000131374.14 chr3:17508605:- YES_LDAS 0.0102 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr3]"] IKBKE--CRTC2 1 0 1.00 0.00 ONLY_REF_SPLICE IKBKE^ENSG00000263528.8 chr1:206474994:+ CRTC2^ENSG00000160741.17 chr1:153952834:- YES_LDAS 0.0102 GT 1.5058 AG 1.7056 ["INTRACHROMOSOMAL[chr1:52.51Mb]"] IKBKB--RBM23 1 0 1.00 0.00 ONLY_REF_SPLICE IKBKB^ENSG00000104365.16 chr8:42329214:+ RBM23^ENSG00000100461.18 chr14:22905659:- YES_LDAS 0.0102 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr8--chr14]"] IKBIP--SLC22A1 1 0 1.00 0.00 ONLY_REF_SPLICE IKBIP^ENSG00000166130.15 chr12:98644523:- SLC22A1^ENSG00000175003.15 chr6:160158516:+ YES_LDAS 0.0102 GT 1.5219 AG 1.3383 ["INTERCHROMOSOMAL[chr12--chr6]"] IFT74--KDM4C 1 0 1.00 0.00 ONLY_REF_SPLICE IFT74^ENSG00000096872.17 chr9:26962087:+ KDM4C^ENSG00000107077.19 chr9:6849507:+ NO_LDAS 0.0102 GT 1.9329 AG 1.4566 ["INTRACHROMOSOMAL[chr9:19.77Mb]"] IFNGR2--ZNF410 1 0 1.00 0.00 ONLY_REF_SPLICE IFNGR2^ENSG00000159128.15 chr21:33415020:+ ZNF410^ENSG00000119725.20 chr14:73920980:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr14]"] IFNGR2--MRI1 1 0 1.00 0.00 ONLY_REF_SPLICE IFNGR2^ENSG00000159128.15 chr21:33432871:+ MRI1^ENSG00000037757.14 chr19:13772121:+ YES_LDAS 0.0102 GT 1.7465 AG 1.5058 ["INTERCHROMOSOMAL[chr21--chr19]"] IFI6--SPHK2 1 0 1.00 0.00 ONLY_REF_SPLICE IFI6^ENSG00000126709.16 chr1:27668226:- SPHK2^ENSG00000063176.16 chr19:48627692:+ YES_LDAS 0.0102 GT 1.8323 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr19]"] IFI6--ACAT2 1 0 1.00 0.00 ONLY_REF_SPLICE IFI6^ENSG00000126709.16 chr1:27669245:- ACAT2^ENSG00000120437.9 chr6:159762919:+ YES_LDAS 0.0102 GT 1.4256 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr6]"] IFI16--B3GALT5-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IFI16^ENSG00000163565.19 chr1:159015909:+ B3GALT5-AS1^ENSG00000184809.13 chr21:39600047:- NO_LDAS 0.0102 GT 0.9710 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr21]"] IDNK--UBQLN1 1 0 1.00 0.00 ONLY_REF_SPLICE IDNK^ENSG00000148057.16 chr9:83628211:+ UBQLN1^ENSG00000135018.14 chr9:83664043:- YES_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr9:0.02Mb]","LOCAL_INVERSION:+:-:[15838]"] IDH3B--SPAG7 1 0 1.00 0.00 ONLY_REF_SPLICE IDH3B^ENSG00000101365.21 chr20:2663925:- SPAG7^ENSG00000091640.8 chr17:4960853:- YES_LDAS 0.0102 GT 1.7819 AG 1.4566 ["INTERCHROMOSOMAL[chr20--chr17]"] IARS1--NOL8 1 0 1.00 0.00 ONLY_REF_SPLICE IARS1^ENSG00000196305.18 chr9:92293441:- NOL8^ENSG00000198000.12 chr9:92310675:- YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr9:0.00Mb]","LOCAL_REARRANGEMENT:-:[3602]"] HULC--AGAP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE HULC^ENSG00000285219.2 chr6:8547214:+ AGAP5^ENSG00000172650.14 chr10:73697720:- NO_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr10]"] HSPA14--MARCHF5 1 0 1.00 0.00 ONLY_REF_SPLICE HSPA14^ENSG00000187522.16 chr10:14849811:+ MARCHF5^ENSG00000198060.10 chr10:92351091:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7056 ["INTRACHROMOSOMAL[chr10:77.42Mb]"] HSH2D--IL12RB1 1 0 1.00 0.00 ONLY_REF_SPLICE HSH2D^ENSG00000196684.12 chr19:16148800:+ IL12RB1^ENSG00000096996.16 chr19:18069713:- YES_LDAS 0.0102 GT 1.8323 AG 1.9899 ["INTRACHROMOSOMAL[chr19:1.90Mb]"] HSD17B4--MREG 1 0 1.00 0.00 ONLY_REF_SPLICE HSD17B4^ENSG00000133835.17 chr5:119472576:+ MREG^ENSG00000118242.16 chr2:215996465:- NO_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr2]"] HSD17B12--PIAS2 1 0 1.00 0.00 ONLY_REF_SPLICE HSD17B12^ENSG00000149084.13 chr11:43754121:+ PIAS2^ENSG00000078043.16 chr18:46864248:- NO_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr18]"] HS2ST1--LINC01140 1 0 1.00 0.00 ONLY_REF_SPLICE HS2ST1^ENSG00000153936.17 chr1:86915160:+ LINC01140^ENSG00000267272.5 chr1:87133614:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.02Mb]","NEIGHBORS[19783]"] HRAS--RAPGEF2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HRAS^ENSG00000174775.17 chr11:535319:- RAPGEF2^ENSG00000109756.9 chr4:159343120:+ NO_LDAS 0.0102 GT 0.9183 AG 1.5058 ["INTERCHROMOSOMAL[chr11--chr4]"] HPS5--TMCC3 1 0 1.00 0.00 ONLY_REF_SPLICE HPS5^ENSG00000110756.18 chr11:18285346:- TMCC3^ENSG00000057704.13 chr12:94582538:- NO_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr12]"] HPS5--FXYD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HPS5^ENSG00000110756.18 chr11:18291442:- FXYD2^ENSG00000137731.14 chr11:117819204:- NO_LDAS 0.0102 GT 1.5656 AG 1.7465 ["INTRACHROMOSOMAL[chr11:99.48Mb]"] HPS5--C2orf69 1 0 1.00 0.00 INCL_NON_REF_SPLICE HPS5^ENSG00000110756.18 chr11:18310797:- C2orf69^ENSG00000178074.6 chr2:199927269:+ YES_LDAS 0.0102 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr2]"] HPS1--SGPP2 1 0 1.00 0.00 ONLY_REF_SPLICE HPS1^ENSG00000107521.20 chr10:98443124:- SGPP2^ENSG00000163082.10 chr2:222474568:+ YES_LDAS 0.0102 GT 1.2729 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr2]"] HPCAL1--NUP88 1 0 1.00 0.00 INCL_NON_REF_SPLICE HPCAL1^ENSG00000115756.13 chr2:10425234:+ NUP88^ENSG00000108559.12 chr17:5404246:- NO_LDAS 0.0102 GC 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr17]"] HOOK3--USP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE HOOK3^ENSG00000168172.9 chr8:43026753:+ USP5^ENSG00000111667.14 chr12:6862470:+ NO_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr12]"] HNRNPKP3--CACNB2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HNRNPKP3^ENSG00000251557.2 chr11:43261684:- CACNB2^ENSG00000165995.22 chr10:18541050:+ NO_LDAS 0.0102 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr10]"] HNRNPDL--CADM2 1 0 0.50 0.00 INCL_NON_REF_SPLICE HNRNPDL^ENSG00000152795.18 chr4:82426037:- CADM2^ENSG00000175161.14 chr3:84959383:+ NO_LDAS 0.0051 GT 1.7968 AG 1.5329 ["INTERCHROMOSOMAL[chr4--chr3]"] HNRNPA3--LINC02447 1 0 1.00 0.00 INCL_NON_REF_SPLICE HNRNPA3^ENSG00000170144.21 chr2:177221962:+ LINC02447^ENSG00000245468.4 chr4:7102870:- NO_LDAS 0.0102 GC 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr4]"] HNRNPA1P48--MAN2A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HNRNPA1P48^ENSG00000224578.5 chr16:51646763:+ MAN2A1^ENSG00000112893.10 chr5:109845943:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr5]"] HMMR--MEN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HMMR^ENSG00000072571.20 chr5:163471404:+ MEN1^ENSG00000133895.17 chr11:64804348:- YES_LDAS 0.0102 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr11]"] HMGN2--TBCB 1 0 1.00 0.00 INCL_NON_REF_SPLICE HMGN2^ENSG00000198830.11 chr1:26473515:+ TBCB^ENSG00000105254.12 chr19:36116041:+ YES_LDAS 0.0102 GT 1.5329 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr19]"] HMGN1--TUBB7P 1 0 0.20 0.00 INCL_NON_REF_SPLICE HMGN1^ENSG00000205581.11 chr21:39348903:- TUBB7P^ENSG00000251297.1 chr4:189983518:- NO_LDAS 0.002 GT 1.7819 AG 1.8256 ["INTERCHROMOSOMAL[chr21--chr4]"] HMGN1--AC111188.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HMGN1^ENSG00000205581.11 chr21:39348292:- AC111188.2^ENSG00000270897.1 chr11:11182286:- YES_LDAS 0.0102 GT 1.5219 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr11]"] HMGCS1--ARAP2 1 0 1.00 0.00 ONLY_REF_SPLICE HMGCS1^ENSG00000112972.15 chr5:43313022:- ARAP2^ENSG00000047365.12 chr4:36133389:- YES_LDAS 0.0102 GT 1.9656 AG 1.5301 ["INTERCHROMOSOMAL[chr5--chr4]"] HMGB1P51--TOP1P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HMGB1P51^ENSG00000270986.1 chr15:58672846:+ TOP1P1^ENSG00000285665.1 chr1:171339712:+ YES_LDAS 0.0102 GT 0.9183 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr1]"] HMGA1P4--IL3RA 1 0 1.00 0.00 ONLY_REF_SPLICE HMGA1P4^ENSG00000234705.2 chr9:128684366:- IL3RA^ENSG00000185291.12 chrX:1378659:+ YES_LDAS 0.0102 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chrY]"] HMGA1--ROCK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HMGA1^ENSG00000137309.20 chr6:34243522:+ ROCK1^ENSG00000067900.8 chr18:20968846:- NO_LDAS 0.0102 GT 1.8295 AG 1.5628 ["INTERCHROMOSOMAL[chr6--chr18]"] HLCS--CCDC127 1 0 1.00 0.00 ONLY_REF_SPLICE HLCS^ENSG00000159267.16 chr21:36896860:- CCDC127^ENSG00000164366.4 chr5:205958:- YES_LDAS 0.0102 GT 1.8062 AG 1.6895 ["INTERCHROMOSOMAL[chr21--chr5]"] HLA-DQA1--IFIH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HLA-DQA1^ENSG00000196735.13 chr6:32637540:+ IFIH1^ENSG00000115267.9 chr2:162306834:- YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr2]"] HLA-DPB1--PEX1 1 0 0.17 0.00 INCL_NON_REF_SPLICE HLA-DPB1^ENSG00000223865.11 chr6:33080807:+ PEX1^ENSG00000127980.16 chr7:92491440:- NO_LDAS 0.0017 GC 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr7]"] HLA-DPB1--CLSTN2 1 0 0.17 0.00 INCL_NON_REF_SPLICE HLA-DPB1^ENSG00000223865.11 chr6:33080807:+ CLSTN2^ENSG00000158258.16 chr3:140566133:+ NO_LDAS 0.0017 GC 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr3]"] HLA-DMA--ADAT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HLA-DMA^ENSG00000204257.15 chr6:32949267:- ADAT1^ENSG00000065457.11 chr16:75598552:- YES_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr16]"] HK1--THADA 1 0 1.00 0.00 ONLY_REF_SPLICE HK1^ENSG00000156515.24 chr10:69384481:+ THADA^ENSG00000115970.19 chr2:43498955:- YES_LDAS 0.0102 GT 1.6402 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr2]"] HK1--SSH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HK1^ENSG00000156515.24 chr10:69398616:+ SSH2^ENSG00000141298.19 chr17:29636218:- YES_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr17]"] HK1--RN7SL709P 1 0 1.00 0.00 INCL_NON_REF_SPLICE HK1^ENSG00000156515.24 chr10:69389292:+ RN7SL709P^ENSG00000241032.3 chr8:37908889:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr10--chr8]"] HIVEP3--MKLN1 1 0 1.00 0.00 ONLY_REF_SPLICE HIVEP3^ENSG00000127124.16 chr1:42035807:- MKLN1^ENSG00000128585.18 chr7:131375424:+ YES_LDAS 0.0102 GT 1.2867 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr7]"] HIVEP3--FOXJ3 1 0 1.00 0.00 ONLY_REF_SPLICE HIVEP3^ENSG00000127124.16 chr1:41918413:- FOXJ3^ENSG00000198815.9 chr1:42227966:- YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["DEEPEST2019","INTRACHROMOSOMAL[chr1:0.14Mb]"] HIVEP3--ARHGAP12 1 0 1.00 0.00 ONLY_REF_SPLICE HIVEP3^ENSG00000127124.16 chr1:41575544:- ARHGAP12^ENSG00000165322.18 chr10:31910563:- YES_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr10]"] HIVEP2--NASP 1 0 1.00 0.00 ONLY_REF_SPLICE HIVEP2^ENSG00000010818.10 chr6:142836935:- NASP^ENSG00000132780.17 chr1:45584108:+ YES_LDAS 0.0102 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] HIKESHI--PLOD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HIKESHI^ENSG00000149196.16 chr11:86306331:+ PLOD1^ENSG00000083444.17 chr1:11963551:+ YES_LDAS 0.0102 AT 1.4716 AC 1.8295 ["INTERCHROMOSOMAL[chr11--chr1]"] HIBCH--PMS1 1 0 1.00 0.00 ONLY_REF_SPLICE HIBCH^ENSG00000198130.16 chr2:190212956:- PMS1^ENSG00000064933.18 chr2:189805652:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7056 ["INTRACHROMOSOMAL[chr2:0.31Mb]"] HIBADH--ZNRF2 1 0 1.00 0.00 ONLY_REF_SPLICE HIBADH^ENSG00000106049.9 chr7:27662698:- ZNRF2^ENSG00000180233.11 chr7:30323642:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr7:2.62Mb]"] HIBADH--CDK13 1 0 1.00 0.00 ONLY_REF_SPLICE HIBADH^ENSG00000106049.9 chr7:27662698:- CDK13^ENSG00000065883.16 chr7:39987599:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr7:12.29Mb]"] HFE--AP4B1 1 0 1.00 0.00 ONLY_REF_SPLICE HFE^ENSG00000010704.19 chr6:26087516:+ AP4B1^ENSG00000134262.13 chr1:113898801:- YES_LDAS 0.0102 GT 1.7465 AG 1.9219 ["INTERCHROMOSOMAL[chr6--chr1]"] HERC4--PHF14 1 0 1.00 0.00 ONLY_REF_SPLICE HERC4^ENSG00000148634.16 chr10:68072883:- PHF14^ENSG00000106443.17 chr7:10982372:+ YES_LDAS 0.0102 GT 1.4566 AG 1.8062 ["INTERCHROMOSOMAL[chr10--chr7]"] HERC4--ILF3 1 0 1.00 0.00 ONLY_REF_SPLICE HERC4^ENSG00000148634.16 chr10:68072883:- ILF3^ENSG00000129351.17 chr19:10688550:+ NO_LDAS 0.0102 GT 1.4566 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr19]"] HERC4--AP4E1 1 0 1.00 0.00 ONLY_REF_SPLICE HERC4^ENSG00000148634.16 chr10:67992199:- AP4E1^ENSG00000081014.11 chr15:51001026:+ YES_LDAS 0.0102 GT 1.9086 AG 1.5301 ["INTERCHROMOSOMAL[chr10--chr15]"] HERC2P2--VPS29 1 0 0.50 0.00 ONLY_REF_SPLICE HERC2P2^ENSG00000276550.4 chr15:22587391:+ VPS29^ENSG00000111237.19 chr12:110496203:- YES_LDAS 0.0051 GT 1.5301 AG 1.3996 ["INTERCHROMOSOMAL[chr15--chr12]"] HERC2P2--DNAJA3 1 0 0.50 0.00 INCL_NON_REF_SPLICE HERC2P2^ENSG00000276550.4 chr15:22495672:+ DNAJA3^ENSG00000103423.14 chr16:4440574:+ YES_LDAS 0.0051 GT 1.6049 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr16]"] HDHD2--THAP6 1 0 1.00 0.00 ONLY_REF_SPLICE HDHD2^ENSG00000167220.12 chr18:47134496:- THAP6^ENSG00000174796.12 chr4:75539859:+ YES_LDAS 0.0102 GT 1.9086 AG 1.3383 ["INTERCHROMOSOMAL[chr18--chr4]"] HDHD2--PRKAR1B 1 0 1.00 0.00 ONLY_REF_SPLICE HDHD2^ENSG00000167220.12 chr18:47150378:- PRKAR1B^ENSG00000188191.15 chr7:680726:- NO_LDAS 0.0102 GT 1.7232 AG 1.3996 ["INTERCHROMOSOMAL[chr18--chr7]"] HDHD2--KATNAL2 1 0 1.00 0.00 ONLY_REF_SPLICE HDHD2^ENSG00000167220.12 chr18:47134496:- KATNAL2^ENSG00000167216.17 chr18:47046457:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTRACHROMOSOMAL[chr18:0.01Mb]","LOCAL_INVERSION:-:+:[5165]"] HDAC4--NDUFA10 1 0 1.00 0.00 ONLY_REF_SPLICE HDAC4^ENSG00000068024.17 chr2:239352678:- NDUFA10^ENSG00000130414.13 chr2:239990182:- NO_LDAS 0.0102 GT 1.6895 AG 1.8256 ["DEEPEST2019","INTRACHROMOSOMAL[chr2:0.49Mb]"] HARS2--GPBP1 1 0 1.00 0.00 ONLY_REF_SPLICE HARS2^ENSG00000112855.17 chr5:140691756:+ GPBP1^ENSG00000062194.16 chr5:57230846:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7232 ["INTRACHROMOSOMAL[chr5:83.43Mb]"] HADHB--HADHA 1 0 1.00 0.00 ONLY_REF_SPLICE HADHB^ENSG00000138029.14 chr2:26244990:+ HADHA^ENSG00000084754.12 chr2:26236988:- YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr2:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[1502]"] HADH--SEC24B 1 0 1.00 0.00 ONLY_REF_SPLICE HADH^ENSG00000138796.17 chr4:107990064:+ SEC24B^ENSG00000138802.11 chr4:109506328:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTRACHROMOSOMAL[chr4:1.40Mb]"] H3C10--ALMS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE H3C10^ENSG00000278828.1 chr6:27810243:+ ALMS1^ENSG00000116127.19 chr2:73601316:+ NO_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr2]"] H2BC4--AARS1 1 0 1.00 0.00 ONLY_REF_SPLICE H2BC4^ENSG00000180596.7 chr6:26123515:- AARS1^ENSG00000090861.17 chr16:70282784:- YES_LDAS 0.0102 GT 1.6729 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr16]"] H2BC18--ATG2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE H2BC18^ENSG00000203814.6 chr1:149811989:- ATG2B^ENSG00000066739.12 chr14:96285737:- YES_LDAS 0.0102 GT 1.7819 AG 1.5219 ["INTERCHROMOSOMAL[chr1--chr14]"] H2AZ2--DDI2 1 0 1.00 0.00 INCL_NON_REF_SPLICE H2AZ2^ENSG00000105968.19 chr7:44835643:- DDI2^ENSG00000197312.12 chr1:15626669:+ NO_LDAS 0.0102 GT 1.8295 AG 1.9899 ["INTERCHROMOSOMAL[chr7--chr1]"] H2AZ1-DT--MARCHF3 1 0 1.00 0.00 ONLY_REF_SPLICE H2AZ1-DT^ENSG00000245322.7 chr4:99950680:+ MARCHF3^ENSG00000173926.6 chr5:126878394:- YES_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr5]"] GVINP1--FAF1 1 0 1.00 0.00 ONLY_REF_SPLICE GVINP1^ENSG00000254838.5 chr11:6746349:- FAF1^ENSG00000185104.20 chr1:50655528:- YES_LDAS 0.0102 GT 1.9656 AG 1.5058 ["INTERCHROMOSOMAL[chr11--chr1]"] GULOP--PPP1R37 1 0 1.00 0.00 INCL_NON_REF_SPLICE GULOP^ENSG00000234770.1 chr8:27586120:+ PPP1R37^ENSG00000104866.11 chr19:45145739:+ NO_LDAS 0.0102 GT 1.7819 AG 1.2867 ["INTERCHROMOSOMAL[chr8--chr19]"] GUK1--TYW1 1 0 0.50 0.00 ONLY_REF_SPLICE GUK1^ENSG00000143774.17 chr1:228147544:+ TYW1^ENSG00000198874.13 chr7:67183126:+ YES_LDAS 0.0051 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr7]"] GUK1--PHF13 1 0 1.00 0.00 ONLY_REF_SPLICE GUK1^ENSG00000143774.17 chr1:228140363:+ PHF13^ENSG00000116273.6 chr1:6616757:+ YES_LDAS 0.0102 GT 1.4295 AG 1.8892 ["INTRACHROMOSOMAL[chr1:221.52Mb]"] GUCD1--LRRC75B 1 0 1.00 0.00 ONLY_REF_SPLICE GUCD1^ENSG00000138867.17 chr22:24554949:- LRRC75B^ENSG00000178026.13 chr22:24589949:- YES_LDAS 0.0102 GT 1.5329 AG 1.8892 ["INTRACHROMOSOMAL[chr22:0.03Mb]","LOCAL_REARRANGEMENT:-:[29685]"] GTPBP4--DHTKD1 1 0 1.00 0.00 ONLY_REF_SPLICE GTPBP4^ENSG00000107937.19 chr10:988527:+ DHTKD1^ENSG00000181192.12 chr10:12081472:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr10:11.05Mb]"] GTPBP2--THUMPD3-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE GTPBP2^ENSG00000172432.19 chr6:43622003:- THUMPD3-AS1^ENSG00000206573.9 chr3:9390497:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr3]"] GTPBP2--HLA-DRB5 1 0 1.00 0.00 INCL_NON_REF_SPLICE GTPBP2^ENSG00000172432.19 chr6:43622063:- HLA-DRB5^ENSG00000198502.6 chr6:32517752:- YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr6:11.08Mb]"] GTPBP1--DSP 1 0 1.00 0.00 INCL_NON_REF_SPLICE GTPBP1^ENSG00000100226.16 chr22:38727283:+ DSP^ENSG00000096696.14 chr6:7580286:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr22--chr6]"] GTF3C5--DDX31 1 0 1.00 0.00 ONLY_REF_SPLICE GTF3C5^ENSG00000148308.18 chr9:133031164:+ DDX31^ENSG00000125485.17 chr9:132662695:- YES_LDAS 0.0102 GT 1.8323 AG 1.8062 ["INTRACHROMOSOMAL[chr9:0.36Mb]"] GTF3C4--UGP2 1 0 0.50 0.00 INCL_NON_REF_SPLICE GTF3C4^ENSG00000125484.12 chr9:132687285:+ UGP2^ENSG00000169764.16 chr2:63887994:+ NO_LDAS 0.0051 GT 1.5656 AG 1.8062 ["INTERCHROMOSOMAL[chr9--chr2]"] GTF2IP20--SEPTIN14 1 0 1.00 0.00 INCL_NON_REF_SPLICE GTF2IP20^ENSG00000272645.3 chr1:223951400:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0102 GT 1.6402 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr7]"] GTF2IP20--FANCA 1 0 0.50 0.00 ONLY_REF_SPLICE GTF2IP20^ENSG00000272645.3 chr1:223992240:- FANCA^ENSG00000187741.15 chr16:89775815:- YES_LDAS 0.0051 GT 1.9219 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr16]"] GTF2I--FAM53C 1 0 1.00 0.00 ONLY_REF_SPLICE GTF2I^ENSG00000263001.7 chr7:74691111:+ FAM53C^ENSG00000120709.11 chr5:138344825:+ YES_LDAS 0.0102 GT 1.2729 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr5]"] GTF2I--AC010261.2 1 0 0.33 0.00 INCL_NON_REF_SPLICE GTF2I^ENSG00000263001.7 chr7:74752170:+ AC010261.2^ENSG00000251187.5 chr5:112209990:+ NO_LDAS 0.0034 GT 1.9656 AG 0.9968 ["INTERCHROMOSOMAL[chr7--chr5]"] GSTK1--SP1 1 0 1.00 0.00 ONLY_REF_SPLICE GSTK1^ENSG00000197448.14 chr7:143264676:+ SP1^ENSG00000185591.10 chr12:53382110:+ YES_LDAS 0.0102 GT 1.8062 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr12]"] GSR--PAFAH1B1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GSR^ENSG00000104687.14 chr8:30679116:- PAFAH1B1^ENSG00000007168.14 chr17:2676314:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr17]"] GSK3B--GTF2E1 1 0 1.00 0.00 ONLY_REF_SPLICE GSK3B^ENSG00000082701.17 chr3:119905755:- GTF2E1^ENSG00000153767.10 chr3:120770728:+ YES_LDAS 0.0102 GT 1.6729 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.65Mb]"] GRK6--HOXD-AS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE GRK6^ENSG00000198055.11 chr5:177435121:+ HOXD-AS2^ENSG00000237380.7 chr2:176136753:- NO_LDAS 0.0102 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr5--chr2]"] GRK5--TIAL1 1 0 1.00 0.00 ONLY_REF_SPLICE GRK5^ENSG00000198873.12 chr10:119326611:+ TIAL1^ENSG00000151923.18 chr10:119588248:- YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr10:0.11Mb]"] GRK2--FAM156A 1 0 0.50 0.00 ONLY_REF_SPLICE GRK2^ENSG00000173020.11 chr11:67266812:+ FAM156A^ENSG00000268350.7 chrX:52956346:- YES_LDAS 0.0051 GT 1.6895 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chrX]"] GRIN2D--PPIB 1 0 1.00 0.00 INCL_NON_REF_SPLICE GRIN2D^ENSG00000105464.4 chr19:48419777:+ PPIB^ENSG00000166794.6 chr15:64160197:- NO_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr15]"] GRHPR--PMM1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GRHPR^ENSG00000137106.18 chr9:37424947:+ PMM1^ENSG00000100417.12 chr22:41584141:- NO_LDAS 0.0102 GT 1.5546 AG 1.7968 ["INTERCHROMOSOMAL[chr9--chr22]"] GRAP--STAT5B 1 0 0.50 0.00 ONLY_REF_SPLICE GRAP^ENSG00000154016.14 chr17:19046849:- STAT5B^ENSG00000173757.10 chr17:42202447:- YES_LDAS 0.0051 GT 1.8062 AG 1.9656 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr17:23.15Mb]"] GRAP--PRPSAP2 1 0 0.50 0.00 ONLY_REF_SPLICE GRAP^ENSG00000154016.14 chr17:19046849:- PRPSAP2^ENSG00000141127.15 chr17:18872583:+ YES_LDAS 0.0051 GT 1.8062 AG 1.4256 ["INTRACHROMOSOMAL[chr17:0.09Mb]","LOCAL_INVERSION:-:+:[89369]"] GPSM3--ZNF45 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPSM3^ENSG00000213654.10 chr6:32192148:- ZNF45^ENSG00000124459.12 chr19:43935220:- NO_LDAS 0.0102 GT 1.5301 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr19]"] GPRIN1--SHFL 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPRIN1^ENSG00000169258.7 chr5:176596059:- SHFL^ENSG00000130813.18 chr19:10086929:+ NO_LDAS 0.0102 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr19]"] GPR89A--AC006001.3 1 0 0.50 0.00 ONLY_REF_SPLICE GPR89A^ENSG00000117262.19 chr1:145665651:+ AC006001.3^ENSG00000229180.7 chr7:66542642:- NO_LDAS 0.0051 GT 1.8256 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr7]"] GPR15--PSME2P3 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPR15^ENSG00000154165.5 chr3:98532700:+ PSME2P3^ENSG00000248988.1 chr4:159007156:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr4]"] GPHN--GSTCD 1 0 1.00 0.00 ONLY_REF_SPLICE GPHN^ENSG00000171723.16 chr14:66508591:+ GSTCD^ENSG00000138780.15 chr4:105822954:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr4]"] GPHN--AL158038.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPHN^ENSG00000171723.16 chr14:66508591:+ AL158038.1^ENSG00000286395.1 chr13:65972869:+ NO_LDAS 0.0102 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr14--chr13]"] GPD2--C3orf18 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPD2^ENSG00000115159.16 chr2:156569006:+ C3orf18^ENSG00000088543.15 chr3:50559198:- NO_LDAS 0.0102 GT 0.0000 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr3]"] GPCPD1--DDX56 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPCPD1^ENSG00000125772.14 chr20:5610751:- DDX56^ENSG00000136271.11 chr7:44570786:- NO_LDAS 0.0102 GT 1.2310 AG 1.4716 ["INTERCHROMOSOMAL[chr20--chr7]"] GPC1--LIN54 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPC1^ENSG00000063660.9 chr2:240435764:+ LIN54^ENSG00000189308.11 chr4:82984876:- NO_LDAS 0.0102 GT 1.5301 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr4]"] GOPC--DCBLD1 1 0 1.00 0.00 ONLY_REF_SPLICE GOPC^ENSG00000047932.14 chr6:117602004:- DCBLD1^ENSG00000164465.19 chr6:117540668:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr6:0.01Mb]","NEIGHBORS_OVERLAP:-:+:[9589]"] GOLGA4--BAZ1A 1 0 1.00 0.00 ONLY_REF_SPLICE GOLGA4^ENSG00000144674.16 chr3:37243622:+ BAZ1A^ENSG00000198604.11 chr14:34786221:- YES_LDAS 0.0102 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr14]"] GOLGA2P5--GOLGA8A 1 0 0.50 0.00 INCL_NON_REF_SPLICE GOLGA2P5^ENSG00000238105.7 chr12:100157171:- GOLGA8A^ENSG00000175265.17 chr15:34382224:- NO_LDAS 0.0051 GT 1.4295 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr15]"] GNPTG--TBL1XR1 1 0 1.00 0.00 ONLY_REF_SPLICE GNPTG^ENSG00000090581.10 chr16:1352306:+ TBL1XR1^ENSG00000177565.18 chr3:177131449:- YES_LDAS 0.0102 GT 1.7819 AG 1.5656 ["INTERCHROMOSOMAL[chr16--chr3]"] GNPTG--RARG 1 0 1.00 0.00 ONLY_REF_SPLICE GNPTG^ENSG00000090581.10 chr16:1352306:+ RARG^ENSG00000172819.17 chr12:53215794:- NO_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr12]"] GNL3L--RPAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GNL3L^ENSG00000130119.17 chrX:54550023:+ RPAP1^ENSG00000103932.12 chr15:41527240:- YES_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chrX--chr15]"] GNG10--UGCG 1 0 1.00 0.00 ONLY_REF_SPLICE GNG10^ENSG00000242616.4 chr9:111666946:+ UGCG^ENSG00000148154.10 chr9:111914605:+ NO_LDAS 0.0102 GT 1.9329 AG 1.7819 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr9:0.23Mb]"] GNB1L--BRCC3 1 0 1.00 0.00 ONLY_REF_SPLICE GNB1L^ENSG00000185838.14 chr22:19854443:- BRCC3^ENSG00000185515.15 chrX:155116057:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chrX]"] GNB1--PHF13 1 0 1.00 0.00 ONLY_REF_SPLICE GNB1^ENSG00000078369.18 chr1:1890820:- PHF13^ENSG00000116273.6 chr1:6616757:+ YES_LDAS 0.0102 GT 1.6729 AG 1.8892 ["INTRACHROMOSOMAL[chr1:4.72Mb]"] GNAI3--AC126323.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE GNAI3^ENSG00000065135.12 chr1:109548838:+ AC126323.1^ENSG00000166104.15 chr15:62246572:- NO_LDAS 0.0051 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] GNAI3--AC126323.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE GNAI3^ENSG00000065135.12 chr1:109548838:+ AC126323.1^ENSG00000166104.15 chr15:62246254:- NO_LDAS 0.0051 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] GNA12--KDM5D 1 0 1.00 0.00 INCL_NON_REF_SPLICE GNA12^ENSG00000146535.14 chr7:2794928:- KDM5D^ENSG00000012817.16 chrY:19709578:- YES_LDAS 0.0102 GT 1.9656 AG 1.5628 ["INTERCHROMOSOMAL[chr7--chrY]"] GMPS--KIFAP3 1 0 1.00 0.00 ONLY_REF_SPLICE GMPS^ENSG00000163655.16 chr3:155870897:+ KIFAP3^ENSG00000075945.13 chr1:169961235:- YES_LDAS 0.0102 GT 1.8062 AG 1.4566 ["INTERCHROMOSOMAL[chr3--chr1]"] GMPS--CEP63 1 0 1.00 0.00 ONLY_REF_SPLICE GMPS^ENSG00000163655.16 chr3:155870897:+ CEP63^ENSG00000182923.19 chr3:134495296:+ YES_LDAS 0.0102 GT 1.8062 AG 1.8295 ["INTRACHROMOSOMAL[chr3:21.30Mb]"] GMFG--ACAP1 1 0 1.00 0.00 ONLY_REF_SPLICE GMFG^ENSG00000130755.13 chr19:39333077:- ACAP1^ENSG00000072818.12 chr17:7343379:+ YES_LDAS 0.0102 GT 1.5656 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr17]"] GMDS-DT--GMDS 1 0 1.00 0.00 ONLY_REF_SPLICE GMDS-DT^ENSG00000250903.9 chr6:2263684:+ GMDS^ENSG00000112699.11 chr6:1930230:- YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr6:0.00Mb]","LOCAL_INVERSION:+:-:[113]"] GLTP--CYTIP 1 0 1.00 0.00 INCL_NON_REF_SPLICE GLTP^ENSG00000139433.11 chr12:109851591:- CYTIP^ENSG00000115165.10 chr2:157415802:- YES_LDAS 0.0102 GT 1.1033 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr2]"] GLOD4--ATR 1 0 1.00 0.00 ONLY_REF_SPLICE GLOD4^ENSG00000167699.13 chr17:780684:- ATR^ENSG00000175054.16 chr3:142513638:- NO_LDAS 0.0102 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr17--chr3]"] GLO1--CNOT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GLO1^ENSG00000124767.7 chr6:38676499:- CNOT1^ENSG00000125107.19 chr16:58583136:- YES_LDAS 0.0102 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr16]"] GLIS2--PAXIP1 1 0 1.00 0.00 ONLY_REF_SPLICE GLIS2^ENSG00000126603.9 chr16:4316254:+ PAXIP1^ENSG00000157212.19 chr7:154998784:- YES_LDAS 0.0102 GT 1.5329 AG 1.7968 ["INTERCHROMOSOMAL[chr16--chr7]"] GLG1--AC005609.5 1 0 1.00 0.00 INCL_NON_REF_SPLICE GLG1^ENSG00000090863.12 chr16:74494760:- AC005609.5^ENSG00000279726.2 chr5:140788221:- NO_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr16--chr5]"] GLCCI1--DGKI 1 0 1.00 0.00 ONLY_REF_SPLICE GLCCI1^ENSG00000106415.13 chr7:7969807:+ DGKI^ENSG00000157680.16 chr7:137678652:- YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTRACHROMOSOMAL[chr7:129.29Mb]"] GLB1--CDC123 1 0 1.00 0.00 INCL_NON_REF_SPLICE GLB1^ENSG00000170266.16 chr3:32997214:- CDC123^ENSG00000151465.14 chr10:12250358:+ NO_LDAS 0.0102 GT 1.9219 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr10]"] GIT2--ARPP19 1 0 1.00 0.00 ONLY_REF_SPLICE GIT2^ENSG00000139436.21 chr12:109953092:- ARPP19^ENSG00000128989.11 chr15:52552104:- YES_LDAS 0.0102 GT 1.5301 AG 1.5628 ["INTERCHROMOSOMAL[chr12--chr15]"] GIPR--TARS1 1 0 1.00 0.00 ONLY_REF_SPLICE GIPR^ENSG00000010310.9 chr19:45669592:+ TARS1^ENSG00000113407.14 chr5:33457257:+ YES_LDAS 0.0102 GT 1.7465 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr5]"] GIPR--LINC00173 1 0 1.00 0.00 ONLY_REF_SPLICE GIPR^ENSG00000010310.9 chr19:45669592:+ LINC00173^ENSG00000196668.4 chr12:116536120:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9219 ["INTERCHROMOSOMAL[chr19--chr12]"] GINS3--AL591242.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GINS3^ENSG00000181938.14 chr16:58404777:+ AL591242.1^ENSG00000242973.6 chr6:46687655:- NO_LDAS 0.0102 GT 1.7819 AG 1.6729 ["INTERCHROMOSOMAL[chr16--chr6]"] GINS1--LARGE1 1 0 1.00 0.00 ONLY_REF_SPLICE GINS1^ENSG00000101003.10 chr20:25407895:+ LARGE1^ENSG00000133424.22 chr22:33761558:- YES_LDAS 0.0102 GT 1.7968 AG 1.5656 ["INTERCHROMOSOMAL[chr20--chr22]"] GIGYF2--PSMD1 1 0 1.00 0.00 ONLY_REF_SPLICE GIGYF2^ENSG00000204120.16 chr2:232697392:+ PSMD1^ENSG00000173692.14 chr2:231138736:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTRACHROMOSOMAL[chr2:1.52Mb]"] GGA3--NPHP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE GGA3^ENSG00000125447.18 chr17:75239965:- NPHP3^ENSG00000113971.20 chr3:132721566:- NO_LDAS 0.0102 GT 1.7819 AG 1.4256 ["INTERCHROMOSOMAL[chr17--chr3]"] GFPT1--SH2D2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE GFPT1^ENSG00000198380.13 chr2:69337948:- SH2D2A^ENSG00000027869.12 chr1:156809271:- YES_LDAS 0.0102 GT 1.9086 AG 1.5546 ["INTERCHROMOSOMAL[chr2--chr1]"] GFPT1--EXOSC8 1 0 1.00 0.00 INCL_NON_REF_SPLICE GFPT1^ENSG00000198380.13 chr2:69328393:- EXOSC8^ENSG00000120699.13 chr13:37005908:+ NO_LDAS 0.0102 GT 1.9899 AG 1.5546 ["INTERCHROMOSOMAL[chr2--chr13]"] GFOD1--TMEM200A 1 0 1.00 0.00 ONLY_REF_SPLICE GFOD1^ENSG00000145990.11 chr6:13486638:- TMEM200A^ENSG00000164484.12 chr6:130385173:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTRACHROMOSOMAL[chr6:116.88Mb]"] GFI1--ZNF644 1 0 1.00 0.00 ONLY_REF_SPLICE GFI1^ENSG00000162676.12 chr1:92482864:- ZNF644^ENSG00000122482.21 chr1:90982370:- YES_LDAS 0.0102 GT 1.6729 AG 1.2419 ["INTRACHROMOSOMAL[chr1:1.45Mb]"] GEN1--NCK1 1 0 1.00 0.00 ONLY_REF_SPLICE GEN1^ENSG00000178295.15 chr2:17754345:+ NCK1^ENSG00000158092.7 chr3:136927984:+ YES_LDAS 0.0102 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr3]"] GEMIN4--CNPPD1 1 0 1.00 0.00 ONLY_REF_SPLICE GEMIN4^ENSG00000179409.11 chr17:752133:- CNPPD1^ENSG00000115649.16 chr2:219176847:- YES_LDAS 0.0102 GT 1.8892 AG 1.4716 ["INTERCHROMOSOMAL[chr17--chr2]"] GDI1--AC008038.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE GDI1^ENSG00000203879.12 chrX:154438549:+ AC008038.1^ENSG00000283041.1 chr7:133035197:- YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chrX--chr7]"] GCNT3--NPIPB11 1 0 1.00 0.00 ONLY_REF_SPLICE GCNT3^ENSG00000140297.13 chr15:59616881:+ NPIPB11^ENSG00000254206.5 chr16:29394076:- YES_LDAS 0.0102 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr16]"] GCA--IFIH1 1 0 1.00 0.00 ONLY_REF_SPLICE GCA^ENSG00000115271.11 chr2:162344275:+ IFIH1^ENSG00000115267.9 chr2:162293668:- NO_LDAS 0.0102 GT 1.4716 AG 1.8295 ["INTRACHROMOSOMAL[chr2:0.00Mb]","LOCAL_INVERSION:+:-:[156]"] GBP4--DZANK1 1 0 1.00 0.00 ONLY_REF_SPLICE GBP4^ENSG00000162654.9 chr1:89185237:- DZANK1^ENSG00000089091.16 chr20:18455361:- YES_LDAS 0.0102 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr20]"] GBP1--GPR107 1 0 1.00 0.00 INCL_NON_REF_SPLICE GBP1^ENSG00000117228.11 chr1:89059320:- GPR107^ENSG00000148358.20 chr9:130135111:+ NO_LDAS 0.0102 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr9]"] GATD3A--MLLT1 1 0 0.50 0.00 ONLY_REF_SPLICE GATD3A^ENSG00000160221.18 chr21:44137296:+ MLLT1^ENSG00000130382.9 chr19:6227102:- YES_LDAS 0.0051 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr21--chr19]"] GATAD2B--C1orf43 1 0 1.00 0.00 ONLY_REF_SPLICE GATAD2B^ENSG00000143614.10 chr1:153922733:- C1orf43^ENSG00000143612.21 chr1:154214574:- YES_LDAS 0.0102 GT 1.3710 AG 1.7056 ["INTRACHROMOSOMAL[chr1:0.28Mb]"] GATAD2B--AC103988.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE GATAD2B^ENSG00000143614.10 chr1:153808111:- AC103988.1^ENSG00000261635.2 chr15:36613740:+ NO_LDAS 0.0051 GT 0.7219 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chr15]"] GATAD2A--RPS6KA3 1 0 1.00 0.00 ONLY_REF_SPLICE GATAD2A^ENSG00000167491.17 chr19:19465614:+ RPS6KA3^ENSG00000177189.14 chrX:20209404:- YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chrX]"] GATAD2A--MAU2 1 0 1.00 0.00 ONLY_REF_SPLICE GATAD2A^ENSG00000167491.17 chr19:19386138:+ MAU2^ENSG00000129933.21 chr19:19335718:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9329 ["DEEPEST2019","INTRACHROMOSOMAL[chr19:0.03Mb]","LOCAL_REARRANGEMENT:+:[27072]"] GAS8--TCF25 1 0 1.00 0.00 ONLY_REF_SPLICE GAS8^ENSG00000141013.17 chr16:90027722:+ TCF25^ENSG00000141002.20 chr16:89883351:+ YES_LDAS 0.0102 GT 1.7056 AG 1.7968 ["DEEPEST2019","INTRACHROMOSOMAL[chr16:0.11Mb]"] GAS6-AS1--SP1 1 0 1.00 0.00 ONLY_REF_SPLICE GAS6-AS1^ENSG00000233695.2 chr13:113833579:+ SP1^ENSG00000185591.10 chr12:53381659:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7056 ["INTERCHROMOSOMAL[chr13--chr12]"] GART--GGA1 1 0 1.00 0.00 ONLY_REF_SPLICE GART^ENSG00000159131.17 chr21:33532345:- GGA1^ENSG00000100083.19 chr22:37629462:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr21--chr22]"] GARS1-DT--FARSB 1 0 1.00 0.00 ONLY_REF_SPLICE GARS1-DT^ENSG00000196295.12 chr7:30550636:- FARSB^ENSG00000116120.11 chr2:222600083:- YES_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr2]"] GALK2--FBN1 1 0 1.00 0.00 ONLY_REF_SPLICE GALK2^ENSG00000156958.15 chr15:49239367:+ FBN1^ENSG00000166147.14 chr15:48613092:- YES_LDAS 0.0102 GT 1.9219 AG 1.9899 ["INTRACHROMOSOMAL[chr15:0.51Mb]"] G6PC3--CSF2RB 1 0 1.00 0.00 INCL_NON_REF_SPLICE G6PC3^ENSG00000141349.9 chr17:44074770:+ CSF2RB^ENSG00000100368.14 chr22:36938037:+ NO_LDAS 0.0102 GT 1.6895 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr22]"] G3BP2--UBAP2L 1 0 1.00 0.00 ONLY_REF_SPLICE G3BP2^ENSG00000138757.15 chr4:75655066:- UBAP2L^ENSG00000143569.19 chr1:154243217:+ NO_LDAS 0.0102 GT 1.3996 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr1]"] G2E3--LARP1B 1 0 1.00 0.00 ONLY_REF_SPLICE G2E3^ENSG00000092140.16 chr14:30593639:+ LARP1B^ENSG00000138709.19 chr4:128107139:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr4]"] FXR1--CCND1 1 0 1.00 0.00 ONLY_REF_SPLICE FXR1^ENSG00000114416.18 chr3:180912736:+ CCND1^ENSG00000110092.4 chr11:69651118:+ YES_LDAS 0.0102 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr3--chr11]"] FUT4--PSMB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FUT4^ENSG00000196371.3 chr11:94548996:+ PSMB1^ENSG00000008018.9 chr6:170537340:- NO_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr6]"] FUBP3--PPP1CB 1 0 1.00 0.00 ONLY_REF_SPLICE FUBP3^ENSG00000107164.16 chr9:130595588:+ PPP1CB^ENSG00000213639.10 chr2:28776851:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr2]"] FUBP1--RNPC3 1 0 1.00 0.00 ONLY_REF_SPLICE FUBP1^ENSG00000162613.17 chr1:77949155:- RNPC3^ENSG00000185946.16 chr1:103555034:+ YES_LDAS 0.0102 GT 1.7232 AG 1.7232 ["INTRACHROMOSOMAL[chr1:25.55Mb]"] FUBP1--CSTF1 1 0 1.00 0.00 ONLY_REF_SPLICE FUBP1^ENSG00000162613.17 chr1:77949155:- CSTF1^ENSG00000101138.12 chr20:56403468:+ YES_LDAS 0.0102 GT 1.7232 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr20]"] FUBP1--C21orf91 1 0 1.00 0.00 ONLY_REF_SPLICE FUBP1^ENSG00000162613.17 chr1:77949155:- C21orf91^ENSG00000154642.11 chr21:17818325:- NO_LDAS 0.0102 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr21]"] FTO--PDCL 1 0 1.00 0.00 INCL_NON_REF_SPLICE FTO^ENSG00000140718.21 chr16:53810222:+ PDCL^ENSG00000136940.14 chr9:122823082:- YES_LDAS 0.0102 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr9]"] FSIP1--PARG 1 0 1.00 0.00 ONLY_REF_SPLICE FSIP1^ENSG00000150667.8 chr15:39713444:- PARG^ENSG00000227345.9 chr10:49879830:- YES_LDAS 0.0102 GT 1.5058 AG 1.7465 ["INTERCHROMOSOMAL[chr15--chr10]"] FRYL--SLAIN2 1 0 1.00 0.00 ONLY_REF_SPLICE FRYL^ENSG00000075539.15 chr4:48780078:- SLAIN2^ENSG00000109171.15 chr4:48420125:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr4:0.07Mb]","LOCAL_INVERSION:-:+:[71156]"] FRMD4A--KDM3B 1 0 1.00 0.00 ONLY_REF_SPLICE FRMD4A^ENSG00000151474.23 chr10:13659323:- KDM3B^ENSG00000120733.14 chr5:138398178:+ YES_LDAS 0.0102 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr5]"] FRG1CP--AC097533.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE FRG1CP^ENSG00000282826.2 chr20:28586299:- AC097533.1^ENSG00000237868.1 chr4:122078049:- YES_LDAS 0.0051 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr20--chr4]"] FOXP1--PRH1 1 0 1.00 0.00 ONLY_REF_SPLICE FOXP1^ENSG00000114861.23 chr3:71198202:- PRH1^ENSG00000231887.7 chr12:11121180:- YES_LDAS 0.0102 GT 1.5656 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr12]"] FOXN2--HEG1 1 0 1.00 0.00 ONLY_REF_SPLICE FOXN2^ENSG00000170802.16 chr2:48346751:+ HEG1^ENSG00000173706.14 chr3:125029488:- YES_LDAS 0.0102 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr2--chr3]"] FOCAD--FAM126A 1 0 1.00 0.00 ONLY_REF_SPLICE FOCAD^ENSG00000188352.12 chr9:20789608:+ FAM126A^ENSG00000122591.13 chr7:22964531:- YES_LDAS 0.0102 GT 1.9219 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr7]"] FNTA--ACSF3 1 0 1.00 0.00 ONLY_REF_SPLICE FNTA^ENSG00000168522.13 chr8:43056546:+ ACSF3^ENSG00000176715.17 chr16:89133136:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr16]"] FNDC3B--NSF 1 0 0.50 0.00 ONLY_REF_SPLICE FNDC3B^ENSG00000075420.13 chr3:172133546:+ NSF^ENSG00000073969.18 chr17:46624244:+ YES_LDAS 0.0051 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr17]"] FNDC3A--SPON2 1 0 1.00 0.00 ONLY_REF_SPLICE FNDC3A^ENSG00000102531.16 chr13:49006289:+ SPON2^ENSG00000159674.12 chr4:1179541:- YES_LDAS 0.0102 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr13--chr4]"] FNDC3A--PROSER1 1 0 1.00 0.00 ONLY_REF_SPLICE FNDC3A^ENSG00000102531.16 chr13:49075364:+ PROSER1^ENSG00000120685.20 chr13:39031631:- YES_LDAS 0.0102 GT 1.9656 AG 1.5628 ["INTRACHROMOSOMAL[chr13:9.94Mb]"] FNDC3A--MTREX 1 0 1.00 0.00 ONLY_REF_SPLICE FNDC3A^ENSG00000102531.16 chr13:49114731:+ MTREX^ENSG00000039123.16 chr5:55405425:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr13--chr5]"] FLVCR1--PCNP 1 0 1.00 0.00 INCL_NON_REF_SPLICE FLVCR1^ENSG00000162769.13 chr1:212889257:+ PCNP^ENSG00000081154.12 chr3:101593411:+ NO_LDAS 0.0102 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr3]"] FKBP8--ACAD9 1 0 1.00 0.00 INCL_NON_REF_SPLICE FKBP8^ENSG00000105701.16 chr19:18539551:- ACAD9^ENSG00000177646.20 chr3:128912029:+ NO_LDAS 0.0102 GT 1.9899 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr3]"] FKBP3--AP2A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FKBP3^ENSG00000100442.11 chr14:45116013:- AP2A1^ENSG00000196961.13 chr19:49799646:+ YES_LDAS 0.0102 GT 1.9086 AG 1.5329 ["INTERCHROMOSOMAL[chr14--chr19]"] FIS1--ALOX12-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE FIS1^ENSG00000214253.9 chr7:101251895:- ALOX12-AS1^ENSG00000215067.10 chr17:7009889:- NO_LDAS 0.0102 GT 1.7056 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr17]"] FIP1L1--LCORL 1 0 1.00 0.00 ONLY_REF_SPLICE FIP1L1^ENSG00000145216.16 chr4:53399839:+ LCORL^ENSG00000178177.16 chr4:17963049:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr4:35.36Mb]"] FILIP1--JARID2 1 0 1.00 0.00 ONLY_REF_SPLICE FILIP1^ENSG00000118407.15 chr6:75414697:- JARID2^ENSG00000008083.14 chr6:15374117:+ YES_LDAS 0.0102 GT 1.6402 AG 1.7465 ["INTRACHROMOSOMAL[chr6:59.77Mb]"] FER1L4--CPNE1 1 0 1.00 0.00 ONLY_REF_SPLICE FER1L4^ENSG00000088340.17 chr20:35595477:- CPNE1^ENSG00000214078.13 chr20:35655344:- YES_LDAS 0.0102 GT 1.8323 AG 1.5628 ["INTRACHROMOSOMAL[chr20:0.02Mb]","LOCAL_REARRANGEMENT:-:[18469]"] FCHO1--UFSP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FCHO1^ENSG00000130475.14 chr19:17784235:+ UFSP1^ENSG00000176125.7 chr7:100889649:- YES_LDAS 0.0102 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr19--chr7]"] FBXW4--LRRFIP2 1 0 1.00 0.00 ONLY_REF_SPLICE FBXW4^ENSG00000107829.15 chr10:101667886:- LRRFIP2^ENSG00000093167.18 chr3:37129149:- YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr3]"] FBXO7--FAM83D 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO7^ENSG00000100225.18 chr22:32475398:+ FAM83D^ENSG00000101447.15 chr20:38947876:+ YES_LDAS 0.0102 GT 1.4566 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr20]"] FBXO7--AC241585.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE FBXO7^ENSG00000100225.18 chr22:32475124:+ AC241585.1^ENSG00000223612.3 chr1:145233055:+ YES_LDAS 0.0051 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr22--chr1]"] FBXO7--AC090061.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FBXO7^ENSG00000100225.18 chr22:32498224:+ AC090061.1^ENSG00000247363.2 chr12:68675093:- NO_LDAS 0.0102 AT 1.7465 AC 1.5058 ["INTERCHROMOSOMAL[chr22--chr12]"] FBXO48--CD2AP 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO48^ENSG00000204923.4 chr2:68464840:- CD2AP^ENSG00000198087.7 chr6:47579385:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr6]"] FBXO45--WDR53 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO45^ENSG00000174013.8 chr3:196577809:+ WDR53^ENSG00000185798.8 chr3:196561491:- YES_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[63]"] FBXO42--CD46 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO42^ENSG00000037637.11 chr1:16352255:- CD46^ENSG00000117335.20 chr1:207757014:+ YES_LDAS 0.0102 GT 1.6402 AG 1.9219 ["INTRACHROMOSOMAL[chr1:191.40Mb]"] FBXO4--DENND4A 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO4^ENSG00000151876.13 chr5:41934308:+ DENND4A^ENSG00000174485.16 chr15:65703008:- YES_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr15]"] FBXO31--TPTEP2 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO31^ENSG00000103264.18 chr16:87383405:- TPTEP2^ENSG00000244627.5 chr22:38336706:- YES_LDAS 0.0102 GT 1.6729 AG 1.6729 ["INTERCHROMOSOMAL[chr16--chr22]"] FBXL5--SMC4 1 0 1.00 0.00 ONLY_REF_SPLICE FBXL5^ENSG00000118564.15 chr4:15681353:- SMC4^ENSG00000113810.16 chr3:160424867:+ YES_LDAS 0.0102 GT 1.4295 AG 1.5546 ["INTERCHROMOSOMAL[chr4--chr3]"] FAU--BTBD9 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAU^ENSG00000149806.11 chr11:65121796:- BTBD9^ENSG00000183826.18 chr6:38169739:- NO_LDAS 0.0102 GC 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr6]"] FARS2--CDYL 1 0 1.00 0.00 ONLY_REF_SPLICE FARS2^ENSG00000145982.13 chr6:5545340:+ CDYL^ENSG00000153046.18 chr6:4891713:+ YES_LDAS 0.0102 GT 1.8256 AG 1.5656 ["TumorFusionsNAR2018","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr6:0.31Mb]"] FARP2--UBE2J2 1 0 1.00 0.00 ONLY_REF_SPLICE FARP2^ENSG00000006607.14 chr2:241475987:+ UBE2J2^ENSG00000160087.21 chr1:1267992:- YES_LDAS 0.0102 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr1]"] FAR1--RABGGTB 1 0 1.00 0.00 ONLY_REF_SPLICE FAR1^ENSG00000197601.13 chr11:13710870:+ RABGGTB^ENSG00000137955.16 chr1:75794510:+ NO_LDAS 0.0102 GT 1.8062 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr1]"] FANCC--FOCAD 1 0 1.00 0.00 ONLY_REF_SPLICE FANCC^ENSG00000158169.13 chr9:95426724:- FOCAD^ENSG00000188352.12 chr9:20862578:+ YES_LDAS 0.0102 GT 1.9899 AG 1.7465 ["INTRACHROMOSOMAL[chr9:74.10Mb]"] FANCC--AGTPBP1 1 0 1.00 0.00 ONLY_REF_SPLICE FANCC^ENSG00000158169.13 chr9:95317129:- AGTPBP1^ENSG00000135049.16 chr9:85712566:- YES_LDAS 0.0102 GT 1.2867 AG 1.6895 ["INTRACHROMOSOMAL[chr9:9.36Mb]"] FANCA--TCF25 1 0 1.00 0.00 ONLY_REF_SPLICE FANCA^ENSG00000187741.15 chr16:89791403:- TCF25^ENSG00000141002.20 chr16:89887652:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.06Mb]","LOCAL_INVERSION:-:+:[56913]"] FAM78A--GRAMD1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM78A^ENSG00000126882.13 chr9:131270292:- GRAMD1A^ENSG00000089351.15 chr19:35012965:+ YES_LDAS 0.0102 GT 1.7968 AG 1.5219 ["INTERCHROMOSOMAL[chr9--chr19]"] FAM53B--EDIL3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM53B^ENSG00000189319.14 chr10:124681607:- EDIL3^ENSG00000164176.13 chr5:84106674:- NO_LDAS 0.0102 GT 1.8256 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr5]"] FAM24B--FBXW4 1 0 1.00 0.00 ONLY_REF_SPLICE FAM24B^ENSG00000213185.7 chr10:122879485:- FBXW4^ENSG00000107829.15 chr10:101624810:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr10:21.15Mb]"] FAM241A--GYPE 1 0 1.00 0.00 ONLY_REF_SPLICE FAM241A^ENSG00000174749.6 chr4:112145733:+ GYPE^ENSG00000197465.14 chr4:143880509:- YES_LDAS 0.0102 GT 1.4295 AG 1.8256 ["INTRACHROMOSOMAL[chr4:31.68Mb]"] FAM214A--DENND4A 1 0 1.00 0.00 ONLY_REF_SPLICE FAM214A^ENSG00000047346.12 chr15:52605133:- DENND4A^ENSG00000174485.16 chr15:65697383:- YES_LDAS 0.0102 GT 1.7056 AG 1.9329 ["INTRACHROMOSOMAL[chr15:12.95Mb]"] FAM214A--AP4E1 1 0 1.00 0.00 ONLY_REF_SPLICE FAM214A^ENSG00000047346.12 chr15:52678006:- AP4E1^ENSG00000081014.11 chr15:50984022:+ YES_LDAS 0.0102 GT 1.8256 AG 1.7465 ["INTRACHROMOSOMAL[chr15:1.58Mb]"] FAM177A1--PPP1R10 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM177A1^ENSG00000151327.13 chr14:35050884:+ PPP1R10^ENSG00000204569.10 chr6:30603648:- YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr6]"] FAM177A1--KTN1 1 0 1.00 0.00 ONLY_REF_SPLICE FAM177A1^ENSG00000151327.13 chr14:35046628:+ KTN1^ENSG00000126777.18 chr14:55612019:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr14:20.45Mb]"] FAM174A--TBCA 1 0 1.00 0.00 ONLY_REF_SPLICE FAM174A^ENSG00000174132.9 chr5:100535964:+ TBCA^ENSG00000171530.15 chr5:77708347:- YES_LDAS 0.0102 GT 1.8295 AG 1.7465 ["INTRACHROMOSOMAL[chr5:22.67Mb]"] FAM172BP--NPHP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM172BP^ENSG00000175841.8 chr3:101522251:+ NPHP3^ENSG00000113971.20 chr3:132722044:- NO_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr3:31.16Mb]"] FAM172A--NR3C1 1 0 1.00 0.00 ONLY_REF_SPLICE FAM172A^ENSG00000113391.19 chr5:93776159:- NR3C1^ENSG00000113580.15 chr5:143300763:- YES_LDAS 0.0102 GT 1.8323 AG 1.5546 ["INTRACHROMOSOMAL[chr5:49.17Mb]"] FAM157C--CUTA 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM157C^ENSG00000260528.5 chr16:90119701:+ CUTA^ENSG00000112514.18 chr6:33416969:- NO_LDAS 0.0102 GT 1.6729 AG 1.6729 ["INTERCHROMOSOMAL[chr16--chr6]"] FAM13B--STAU2 1 0 1.00 0.00 ONLY_REF_SPLICE FAM13B^ENSG00000031003.10 chr5:138021031:- STAU2^ENSG00000040341.18 chr8:73738349:- YES_LDAS 0.0102 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr5--chr8]"] FAM135A--SMAP1 1 0 1.00 0.00 ONLY_REF_SPLICE FAM135A^ENSG00000082269.17 chr6:70482154:+ SMAP1^ENSG00000112305.15 chr6:70852540:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8062 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr6:0.11Mb]"] FAM135A--HP1BP3 1 0 1.00 0.00 ONLY_REF_SPLICE FAM135A^ENSG00000082269.17 chr6:70415376:+ HP1BP3^ENSG00000127483.19 chr1:20773610:- YES_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr1]"] FAM122B--PGS1 1 0 1.00 0.00 ONLY_REF_SPLICE FAM122B^ENSG00000156504.16 chrX:134781821:- PGS1^ENSG00000087157.19 chr17:78396308:+ NO_LDAS 0.0102 GT 1.9219 AG 1.7056 ["INTERCHROMOSOMAL[chrX--chr17]"] FAM120B--UPF3AP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM120B^ENSG00000112584.14 chr6:170404559:+ UPF3AP3^ENSG00000234709.2 chr9:99998490:- NO_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr9]"] FAAP24--PVT1 1 0 1.00 0.00 ONLY_REF_SPLICE FAAP24^ENSG00000131944.10 chr19:32974212:+ PVT1^ENSG00000249859.12 chr8:128009590:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr8]"] FAAP100--CRADD 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAAP100^ENSG00000185504.17 chr17:81545755:- CRADD^ENSG00000169372.13 chr12:93679039:+ YES_LDAS 0.0102 GT 1.8062 AG 1.5058 ["INTERCHROMOSOMAL[chr17--chr12]"] EYA3--ZFAS1 1 0 1.00 0.00 ONLY_REF_SPLICE EYA3^ENSG00000158161.16 chr1:28048383:- ZFAS1^ENSG00000177410.13 chr20:49289045:+ YES_LDAS 0.0102 GT 1.7232 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr20]"] EYA3--DDX1 1 0 1.00 0.00 ONLY_REF_SPLICE EYA3^ENSG00000158161.16 chr1:28088524:- DDX1^ENSG00000079785.16 chr2:15603192:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr2]"] EXTL3--VASP 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXTL3^ENSG00000012232.9 chr8:28716835:+ VASP^ENSG00000125753.14 chr19:45522727:+ YES_LDAS 0.0102 GT 1.8323 AG 1.5628 ["INTERCHROMOSOMAL[chr8--chr19]"] EXTL3--HMGN2 1 0 0.17 0.00 INCL_NON_REF_SPLICE EXTL3^ENSG00000012232.9 chr8:28754331:+ HMGN2^ENSG00000198830.11 chr1:26474626:+ YES_LDAS 0.0017 GT 1.2310 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr1]"] EXT2--MMAB 1 0 1.00 0.00 ONLY_REF_SPLICE EXT2^ENSG00000151348.15 chr11:44114301:+ MMAB^ENSG00000139428.12 chr12:109565176:- YES_LDAS 0.0102 GT 1.4295 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr12]"] EXOSC8--SETD5 1 0 1.00 0.00 ONLY_REF_SPLICE EXOSC8^ENSG00000120699.13 chr13:37003007:+ SETD5^ENSG00000168137.18 chr3:9434590:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9219 ["INTERCHROMOSOMAL[chr13--chr3]"] EXOSC10--AL591135.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE EXOSC10^ENSG00000171824.14 chr1:11098023:- AL591135.1^ENSG00000218418.2 chr6:80064700:- NO_LDAS 0.0051 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr6]"] EXOSC1--AC108134.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOSC1^ENSG00000171311.13 chr10:97437191:- AC108134.2^ENSG00000261889.1 chr16:3156953:- YES_LDAS 0.0102 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr10--chr16]"] EXOC7--E2F4 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOC7^ENSG00000182473.22 chr17:76085689:- E2F4^ENSG00000205250.9 chr16:67198443:+ YES_LDAS 0.0102 GT 1.5656 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr16]"] EXOC5--UQCRB 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC5^ENSG00000070367.16 chr14:57235711:- UQCRB^ENSG00000156467.10 chr8:96231940:- YES_LDAS 0.0102 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr14--chr8]"] EXOC5--BAZ1A 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC5^ENSG00000070367.16 chr14:57268622:- BAZ1A^ENSG00000198604.11 chr14:34862322:- YES_LDAS 0.0102 GT 1.9086 AG 1.8295 ["INTRACHROMOSOMAL[chr14:22.32Mb]"] EXOC4--DNAJB6 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC4^ENSG00000131558.15 chr7:133480138:+ DNAJB6^ENSG00000105993.15 chr7:157416016:+ YES_LDAS 0.0102 GT 1.8323 AG 1.5219 ["INTRACHROMOSOMAL[chr7:23.27Mb]"] EVC--GFM2 1 0 1.00 0.00 ONLY_REF_SPLICE EVC^ENSG00000072840.13 chr4:5756362:+ GFM2^ENSG00000164347.18 chr5:74747780:- YES_LDAS 0.0102 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr4--chr5]"] ETV5--PIK3CA 1 0 1.00 0.00 ONLY_REF_SPLICE ETV5^ENSG00000244405.8 chr3:186105305:- PIK3CA^ENSG00000121879.6 chr3:179198750:+ YES_LDAS 0.0102 GT 1.9329 AG 1.6895 ["INTRACHROMOSOMAL[chr3:6.81Mb]"] ETNK1--CYP7B1 1 0 1.00 0.00 ONLY_REF_SPLICE ETNK1^ENSG00000139163.16 chr12:22625586:+ CYP7B1^ENSG00000172817.4 chr8:64624539:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr8]"] ETNK1--AC138409.2 1 0 0.50 0.00 ONLY_REF_SPLICE ETNK1^ENSG00000139163.16 chr12:22644022:+ AC138409.2^ENSG00000215158.9 chr5:34182867:- YES_LDAS 0.0051 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr5]"] ETFB--MRPS22P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ETFB^ENSG00000105379.10 chr19:51347021:- MRPS22P1^ENSG00000271056.1 chrX:87809730:- NO_LDAS 0.0102 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chrX]"] ERP44--STX7 1 0 1.00 0.00 ONLY_REF_SPLICE ERP44^ENSG00000023318.8 chr9:100098784:- STX7^ENSG00000079950.14 chr6:132503588:- YES_LDAS 0.0102 GT 1.4295 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr6]"] ERP44--PIP5K1B 1 0 1.00 0.00 ONLY_REF_SPLICE ERP44^ENSG00000023318.8 chr9:100098784:- PIP5K1B^ENSG00000107242.20 chr9:68742501:+ YES_LDAS 0.0102 GT 1.4295 AG 1.7056 ["INTRACHROMOSOMAL[chr9:30.97Mb]"] ERP29--ZNF780B 1 0 1.00 0.00 ONLY_REF_SPLICE ERP29^ENSG00000089248.7 chr12:112013609:+ ZNF780B^ENSG00000128000.17 chr19:40036626:- NO_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr19]"] ERICH2--NPM1P6 1 0 1.00 0.00 INCL_NON_REF_SPLICE ERICH2^ENSG00000204334.7 chr2:170784786:+ NPM1P6^ENSG00000213881.3 chr8:61202727:+ NO_LDAS 0.0102 GT 1.5301 AG 1.2867 ["INTERCHROMOSOMAL[chr2--chr8]"] ERI3--STX17 1 0 1.00 0.00 ONLY_REF_SPLICE ERI3^ENSG00000117419.16 chr1:44354892:- STX17^ENSG00000136874.11 chr9:99951060:+ YES_LDAS 0.0102 GT 1.5219 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr9]"] ERGIC3--CPEB4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ERGIC3^ENSG00000125991.20 chr20:35548633:+ CPEB4^ENSG00000113742.14 chr5:173960895:+ NO_LDAS 0.0102 AT 1.7056 AC 1.9656 ["INTERCHROMOSOMAL[chr20--chr5]"] ERGIC2--ITM2A 1 0 1.00 0.00 ONLY_REF_SPLICE ERGIC2^ENSG00000087502.18 chr12:29381115:- ITM2A^ENSG00000078596.11 chrX:79363554:- YES_LDAS 0.0102 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chrX]"] ERCC8--NLN 1 0 1.00 0.00 ONLY_REF_SPLICE ERCC8^ENSG00000049167.15 chr5:60887440:- NLN^ENSG00000123213.23 chr5:65792454:+ YES_LDAS 0.0102 GT 1.9329 AG 1.4716 ["INTRACHROMOSOMAL[chr5:4.78Mb]"] ERCC2--UBTF 1 0 1.00 0.00 ONLY_REF_SPLICE ERCC2^ENSG00000104884.16 chr19:45370133:- UBTF^ENSG00000108312.15 chr17:44218296:- YES_LDAS 0.0102 GT 1.8256 AG 1.5329 ["INTERCHROMOSOMAL[chr19--chr17]"] ERBIN--ZBED5-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE ERBIN^ENSG00000112851.15 chr5:65994864:+ ZBED5-AS1^ENSG00000247271.7 chr11:10906455:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr5--chr11]"] ERAP1--ANPEP 1 0 1.00 0.00 ONLY_REF_SPLICE ERAP1^ENSG00000164307.13 chr5:96793803:- ANPEP^ENSG00000166825.15 chr15:89804002:- NO_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr15]"] EPSTI1--HIPK3 1 0 1.00 0.00 ONLY_REF_SPLICE EPSTI1^ENSG00000133106.15 chr13:42991978:- HIPK3^ENSG00000110422.12 chr11:33328510:+ YES_LDAS 0.0102 GT 1.3996 AG 1.9656 ["INTERCHROMOSOMAL[chr13--chr11]"] EPS8--AC211485.1 1 0 0.11 0.00 INCL_NON_REF_SPLICE EPS8^ENSG00000151491.14 chr12:15658493:- AC211485.1^ENSG00000225005.1 chr7:73314351:+ YES_LDAS 0.0011 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr7]"] EPRS1--RN7SL617P 1 0 0.12 0.00 INCL_NON_REF_SPLICE EPRS1^ENSG00000136628.18 chr1:219987142:- RN7SL617P^ENSG00000241162.3 chr6:110440139:- YES_LDAS 0.0012 GT 1.6729 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr6]"] EPRS1--RN7SL408P 1 0 0.12 0.00 INCL_NON_REF_SPLICE EPRS1^ENSG00000136628.18 chr1:219987142:- RN7SL408P^ENSG00000266875.2 chr6:134133736:+ YES_LDAS 0.0012 GT 1.6729 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr6]"] EPRS1--RN7SL277P 1 0 0.12 0.00 INCL_NON_REF_SPLICE EPRS1^ENSG00000136628.18 chr1:219987142:- RN7SL277P^ENSG00000240490.3 chr1:19424548:+ YES_LDAS 0.0012 GT 1.6729 AG 1.8295 ["INTRACHROMOSOMAL[chr1:200.54Mb]"] EPHB1--ITPR1 1 0 1.00 0.00 ONLY_REF_SPLICE EPHB1^ENSG00000154928.18 chr3:134795689:+ ITPR1^ENSG00000150995.20 chr3:4766530:+ YES_LDAS 0.0102 GT 1.8295 AG 1.5329 ["INTRACHROMOSOMAL[chr3:129.75Mb]"] EPHB1--GSK3B 1 0 1.00 0.00 ONLY_REF_SPLICE EPHB1^ENSG00000154928.18 chr3:135179982:+ GSK3B^ENSG00000082701.17 chr3:119826855:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr3:14.50Mb]"] EPC2--TANK 1 0 1.00 0.00 ONLY_REF_SPLICE EPC2^ENSG00000135999.12 chr2:148645170:+ TANK^ENSG00000136560.14 chr2:161179614:+ YES_LDAS 0.0102 GT 1.5628 AG 1.7819 ["INTRACHROMOSOMAL[chr2:12.35Mb]"] ENC1--XRCC5 1 0 1.00 0.00 ONLY_REF_SPLICE ENC1^ENSG00000171617.15 chr5:74640307:- XRCC5^ENSG00000079246.16 chr2:216190225:+ NO_LDAS 0.0102 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr5--chr2]"] EML4--ZNF516 1 0 1.00 0.00 ONLY_REF_SPLICE EML4^ENSG00000143924.19 chr2:42169636:+ ZNF516^ENSG00000101493.11 chr18:76362557:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr18]"] EML4--SNRK 1 0 1.00 0.00 INCL_NON_REF_SPLICE EML4^ENSG00000143924.19 chr2:42329861:+ SNRK^ENSG00000163788.14 chr3:43340438:+ NO_LDAS 0.0102 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr3]"] EML2--GRSF1 1 0 1.00 0.00 ONLY_REF_SPLICE EML2^ENSG00000125746.18 chr19:45629951:- GRSF1^ENSG00000132463.14 chr4:70825431:- YES_LDAS 0.0102 GT 1.7465 AG 1.5329 ["INTERCHROMOSOMAL[chr19--chr4]"] EMID1--OTOL1 1 0 1.00 0.00 ONLY_REF_SPLICE EMID1^ENSG00000186998.16 chr22:29234349:+ OTOL1^ENSG00000182447.4 chr3:161503026:+ NO_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr3]"] EMG1--LINC01796 1 0 1.00 0.00 INCL_NON_REF_SPLICE EMG1^ENSG00000126749.16 chr12:6971091:+ LINC01796^ENSG00000277527.2 chr2:102892934:- NO_LDAS 0.0102 GT 1.9086 AG 1.2729 ["INTERCHROMOSOMAL[chr12--chr2]"] EMD--UFD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE EMD^ENSG00000102119.11 chrX:154380367:+ UFD1^ENSG00000070010.19 chr22:19466346:- NO_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr22]"] EMC2--EIF3E 1 0 1.00 0.00 ONLY_REF_SPLICE EMC2^ENSG00000104412.8 chr8:108453147:+ EIF3E^ENSG00000104408.11 chr8:108165423:- YES_LDAS 0.0102 GT 1.8323 AG 1.2310 ["INTRACHROMOSOMAL[chr8:0.00Mb]","LOCAL_INVERSION:+:-:[105]"] ELP4--FMR1 1 0 1.00 0.00 ONLY_REF_SPLICE ELP4^ENSG00000109911.19 chr11:31520091:+ FMR1^ENSG00000102081.15 chrX:147921933:+ YES_LDAS 0.0102 GT 1.8295 AG 1.8256 ["INTERCHROMOSOMAL[chr11--chrX]"] ELP4--CNOT4 1 0 1.00 0.00 ONLY_REF_SPLICE ELP4^ENSG00000109911.19 chr11:31650221:+ CNOT4^ENSG00000080802.19 chr7:135364066:- YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr7]"] ELOVL1--PTPN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ELOVL1^ENSG00000066322.15 chr1:43364417:- PTPN1^ENSG00000196396.10 chr20:50579703:+ NO_LDAS 0.0102 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr20]"] ELOB--AL109933.4 1 0 0.33 0.00 INCL_NON_REF_SPLICE ELOB^ENSG00000103363.15 chr16:2775451:- AL109933.4^ENSG00000276960.1 chr6:160755407:- NO_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr6]"] ELMO1--CLIC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:37211409:- CLIC1^ENSG00000213719.8 chr6:31733647:- YES_LDAS 0.0102 AT 1.9329 AC 1.8323 ["INTERCHROMOSOMAL[chr7--chr6]"] ELL2--TP53BP1 1 0 1.00 0.00 ONLY_REF_SPLICE ELL2^ENSG00000118985.16 chr5:95895628:- TP53BP1^ENSG00000067369.14 chr15:43407570:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr15]"] ELL2--MEF2C 1 0 1.00 0.00 ONLY_REF_SPLICE ELL2^ENSG00000118985.16 chr5:95961575:- MEF2C^ENSG00000081189.16 chr5:88731901:- YES_LDAS 0.0102 GT 1.7819 AG 1.7968 ["INTRACHROMOSOMAL[chr5:6.98Mb]"] ELL2--IVNS1ABP 1 0 1.00 0.00 ONLY_REF_SPLICE ELL2^ENSG00000118985.16 chr5:95943002:- IVNS1ABP^ENSG00000116679.16 chr1:185305643:- YES_LDAS 0.0102 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr1]"] ELL--UBIAD1 1 0 1.00 0.00 ONLY_REF_SPLICE ELL^ENSG00000105656.13 chr19:18521921:- UBIAD1^ENSG00000120942.14 chr1:11294873:+ YES_LDAS 0.0102 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr1]"] ELK3--ABCB7 1 0 1.00 0.00 ONLY_REF_SPLICE ELK3^ENSG00000111145.8 chr12:96194705:+ ABCB7^ENSG00000131269.19 chrX:75076654:- YES_LDAS 0.0102 GT 1.7232 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chrX]"] ELF1--COG6 1 0 1.00 0.00 ONLY_REF_SPLICE ELF1^ENSG00000120690.16 chr13:40981983:- COG6^ENSG00000133103.17 chr13:39719236:+ YES_LDAS 0.0102 GT 1.7056 AG 1.8892 ["INTRACHROMOSOMAL[chr13:1.14Mb]"] ELAPOR2--DMTF1 1 0 1.00 0.00 ONLY_REF_SPLICE ELAPOR2^ENSG00000164659.15 chr7:86891724:- DMTF1^ENSG00000135164.19 chr7:87179545:+ YES_LDAS 0.0102 GT 1.9899 AG 1.7465 ["INTRACHROMOSOMAL[chr7:0.09Mb]","LOCAL_INVERSION:-:+:[92755]"] EIPR1--TRAPPC12 1 0 1.00 0.00 ONLY_REF_SPLICE EIPR1^ENSG00000032389.13 chr2:3354550:- TRAPPC12^ENSG00000171853.16 chr2:3387620:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8295 ["INTRACHROMOSOMAL[chr2:0.00Mb]","LOCAL_INVERSION:-:+:[1845]"] EIPR1--TRAPPC12 1 0 1.00 0.00 ONLY_REF_SPLICE EIPR1^ENSG00000032389.13 chr2:3338017:- TRAPPC12^ENSG00000171853.16 chr2:3421881:+ NO_LDAS 0.0102 GT 1.8323 AG 1.9086 ["INTRACHROMOSOMAL[chr2:0.00Mb]","LOCAL_INVERSION:-:+:[1845]"] EIPR1--DCP2 1 0 1.00 0.00 ONLY_REF_SPLICE EIPR1^ENSG00000032389.13 chr2:3377648:- DCP2^ENSG00000172795.17 chr5:112985835:+ YES_LDAS 0.0102 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr5]"] EIF4E--SMC6 1 0 1.00 0.00 ONLY_REF_SPLICE EIF4E^ENSG00000151247.13 chr4:98901876:- SMC6^ENSG00000163029.16 chr2:17745951:- YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr2]"] EIF4A1--EFCAB12 1 0 1.00 0.00 INCL_NON_REF_SPLICE EIF4A1^ENSG00000161960.16 chr17:7575258:+ EFCAB12^ENSG00000172771.12 chr3:129412669:- NO_LDAS 0.0102 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr3]"] EIF3M--ZC3H12C 1 0 1.00 0.00 ONLY_REF_SPLICE EIF3M^ENSG00000149100.13 chr11:32583929:+ ZC3H12C^ENSG00000149289.11 chr11:110136663:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr11:77.49Mb]"] EIF3M--CSTF3 1 0 1.00 0.00 ONLY_REF_SPLICE EIF3M^ENSG00000149100.13 chr11:32583929:+ CSTF3^ENSG00000176102.13 chr11:33106064:- YES_LDAS 0.0102 GT 1.6895 AG 1.7232 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr11:0.47Mb]"] EIF3C--LAD1 1 0 0.25 0.00 INCL_NON_REF_SPLICE EIF3C^ENSG00000184110.15 chr16:28714690:+ LAD1^ENSG00000159166.15 chr1:201387131:- NO_LDAS 0.0025 GT 1.7056 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr1]"] EIF2S3--NRDE2 1 0 1.00 0.00 INCL_NON_REF_SPLICE EIF2S3^ENSG00000130741.11 chrX:24064269:+ NRDE2^ENSG00000119720.18 chr14:90292822:- YES_LDAS 0.0102 GT 1.4566 AG 1.9086 ["INTERCHROMOSOMAL[chrX--chr14]"] EIF2B5--MYH3 1 0 1.00 0.00 ONLY_REF_SPLICE EIF2B5^ENSG00000145191.15 chr3:184138246:+ MYH3^ENSG00000109063.15 chr17:10641372:- YES_LDAS 0.0102 GT 1.8323 AG 1.6729 ["INTERCHROMOSOMAL[chr3--chr17]"] EIF2B5--HLA-DMA 1 0 1.00 0.00 ONLY_REF_SPLICE EIF2B5^ENSG00000145191.15 chr3:184140730:+ HLA-DMA^ENSG00000204257.15 chr6:32950803:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr6]"] EIF2AK1--AC009412.1 1 0 1.00 0.00 ONLY_REF_SPLICE EIF2AK1^ENSG00000086232.13 chr7:6054546:- AC009412.1^ENSG00000286075.2 chr7:6331235:- YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.27Mb]"] EIF1AX--TUT7 1 0 0.33 0.00 ONLY_REF_SPLICE EIF1AX^ENSG00000173674.11 chrX:20141625:- TUT7^ENSG00000083223.18 chr9:86353230:- NO_LDAS 0.0034 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chrX--chr9]"] EID1--KLC4 1 0 1.00 0.00 INCL_NON_REF_SPLICE EID1^ENSG00000255302.5 chr15:48878531:+ KLC4^ENSG00000137171.15 chr6:43040656:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7232 ["INTERCHROMOSOMAL[chr15--chr6]"] EGFEM1P--PDCD10 1 0 1.00 0.00 ONLY_REF_SPLICE EGFEM1P^ENSG00000206120.11 chr3:168250027:+ PDCD10^ENSG00000114209.15 chr3:167697126:- YES_LDAS 0.0102 GT 1.7819 AG 1.5546 ["INTRACHROMOSOMAL[chr3:0.51Mb]"] EFR3A--MPRIP 1 0 0.50 0.00 ONLY_REF_SPLICE EFR3A^ENSG00000132294.15 chr8:131904322:+ MPRIP^ENSG00000133030.22 chr17:17075710:+ YES_LDAS 0.0051 GT 1.7232 AG 1.8062 ["INTERCHROMOSOMAL[chr8--chr17]"] EFL1P1--AC243562.2 1 0 0.33 0.00 INCL_NON_REF_SPLICE EFL1P1^ENSG00000259404.5 chr15:84126600:+ AC243562.2^ENSG00000259683.1 chr15:84389732:+ YES_LDAS 0.0034 GT 1.9086 AG 1.5058 ["INTRACHROMOSOMAL[chr15:0.26Mb]"] EFCAB2--KIF26B 1 0 1.00 0.00 ONLY_REF_SPLICE EFCAB2^ENSG00000203666.12 chr1:245083688:+ KIF26B^ENSG00000162849.16 chr1:245366834:+ YES_LDAS 0.0102 GT 1.7465 AG 1.7819 ["INTRACHROMOSOMAL[chr1:0.03Mb]","NEIGHBORS[27821]"] EFCAB15P--CAMTA2 1 0 1.00 0.00 INCL_NON_REF_SPLICE EFCAB15P^ENSG00000233483.3 chr17:45248185:- CAMTA2^ENSG00000108509.21 chr17:4972991:- YES_LDAS 0.0102 GT 1.6895 AG 1.7819 ["INTRACHROMOSOMAL[chr17:40.26Mb]"] EEF1AKMT1--MCCC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE EEF1AKMT1^ENSG00000150456.11 chr13:20757455:- MCCC2^ENSG00000131844.16 chr5:71657452:+ YES_LDAS 0.0102 GT 1.5058 AG 1.3996 ["INTERCHROMOSOMAL[chr13--chr5]"] EEF1A1P5--PMPCA 1 0 0.50 0.00 INCL_NON_REF_SPLICE EEF1A1P5^ENSG00000196205.8 chr9:133020791:+ PMPCA^ENSG00000165688.12 chr9:136421853:+ YES_LDAS 0.0051 GT 1.8295 AG 1.9086 ["INTRACHROMOSOMAL[chr9:3.39Mb]"] EEA1--YAF2 1 0 1.00 0.00 ONLY_REF_SPLICE EEA1^ENSG00000102189.17 chr12:92842465:- YAF2^ENSG00000015153.15 chr12:42161765:- YES_LDAS 0.0102 GT 1.3753 AG 1.9656 ["INTRACHROMOSOMAL[chr12:50.53Mb]"] EEA1--NUDT4 1 0 0.33 0.00 ONLY_REF_SPLICE EEA1^ENSG00000102189.17 chr12:92891629:- NUDT4^ENSG00000173598.14 chr12:93394609:+ YES_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr12:0.45Mb]"] EDA2R--ARHGEF9 1 0 1.00 0.00 ONLY_REF_SPLICE EDA2R^ENSG00000131080.15 chrX:66639201:- ARHGEF9^ENSG00000131089.17 chrX:63724711:- YES_LDAS 0.0102 GT 1.8323 AG 1.9899 ["INTRACHROMOSOMAL[chrX:2.79Mb]"] ECI1--RNPS1 1 0 1.00 0.00 ONLY_REF_SPLICE ECI1^ENSG00000167969.13 chr16:2251316:- RNPS1^ENSG00000205937.12 chr16:2255726:- YES_LDAS 0.0102 GT 1.3996 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:-:[816]"] ECH1--NAAA 1 0 1.00 0.00 INCL_NON_REF_SPLICE ECH1^ENSG00000104823.9 chr19:38817451:- NAAA^ENSG00000138744.16 chr4:75939995:- NO_LDAS 0.0102 GT 1.9086 AG 1.6402 ["INTERCHROMOSOMAL[chr19--chr4]"] ECE1--PIP4K2B 1 0 1.00 0.00 ONLY_REF_SPLICE ECE1^ENSG00000117298.16 chr1:21290070:- PIP4K2B^ENSG00000276293.5 chr17:38786920:- YES_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr17]"] EBF1--TRDMT1 1 0 1.00 0.00 ONLY_REF_SPLICE EBF1^ENSG00000164330.17 chr5:159073396:- TRDMT1^ENSG00000107614.22 chr10:17174660:- YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr10]"] EBF1--SCN5A 1 0 1.00 0.00 INCL_NON_REF_SPLICE EBF1^ENSG00000164330.17 chr5:158777413:- SCN5A^ENSG00000183873.18 chr3:38609811:- NO_LDAS 0.0102 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr3]"] EBF1--EIF4A2 1 0 1.00 0.00 ONLY_REF_SPLICE EBF1^ENSG00000164330.17 chr5:159073396:- EIF4A2^ENSG00000156976.17 chr3:186787127:+ YES_LDAS 0.0102 GT 1.8062 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr3]"] EAF2--PIGL 1 0 0.50 0.00 INCL_NON_REF_SPLICE EAF2^ENSG00000145088.9 chr3:121844547:+ PIGL^ENSG00000108474.17 chr17:16217992:+ NO_LDAS 0.0051 GT 1.8295 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr17]"] E2F4--LAMA5 1 0 1.00 0.00 ONLY_REF_SPLICE E2F4^ENSG00000205250.9 chr16:67192870:+ LAMA5^ENSG00000130702.15 chr20:62309835:- NO_LDAS 0.0102 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr16--chr20]"] E2F3--UBE2N 1 0 1.00 0.00 ONLY_REF_SPLICE E2F3^ENSG00000112242.15 chr6:20403832:+ UBE2N^ENSG00000177889.10 chr12:93411299:- YES_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr12]"] E2F3--CDKAL1 1 0 1.00 0.00 ONLY_REF_SPLICE E2F3^ENSG00000112242.15 chr6:20403832:+ CDKAL1^ENSG00000145996.11 chr6:20546346:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["Klijn_CellLines","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr6:0.04Mb]","NEIGHBORS[40743]"] DZIP3--AFAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DZIP3^ENSG00000198919.13 chr3:108605438:+ AFAP1^ENSG00000196526.10 chr4:7788995:- NO_LDAS 0.0102 GT 1.4566 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr4]"] DUSP22--SNX27 1 0 1.00 0.00 ONLY_REF_SPLICE DUSP22^ENSG00000112679.14 chr6:311962:+ SNX27^ENSG00000143376.14 chr1:151638888:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr1]"] DUSP22--PSMG3 1 0 1.00 0.00 ONLY_REF_SPLICE DUSP22^ENSG00000112679.14 chr6:292560:+ PSMG3^ENSG00000157778.9 chr7:1569360:- YES_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr7]"] DUSP11--TNFRSF10C 1 0 1.00 0.00 ONLY_REF_SPLICE DUSP11^ENSG00000144048.10 chr2:73769265:- TNFRSF10C^ENSG00000173535.15 chr8:23111720:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr8]"] DUS1L--EIF3F 1 0 1.00 0.00 INCL_NON_REF_SPLICE DUS1L^ENSG00000169718.18 chr17:82064823:- EIF3F^ENSG00000175390.15 chr11:7987435:+ NO_LDAS 0.0102 GT 1.8295 AG 1.4566 ["INTERCHROMOSOMAL[chr17--chr11]"] DSN1--SEPHS1 1 0 1.00 0.00 ONLY_REF_SPLICE DSN1^ENSG00000149636.16 chr20:36773662:- SEPHS1^ENSG00000086475.15 chr10:13345028:- YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr10]"] DRAP1--FGD5 1 0 1.00 0.00 INCL_NON_REF_SPLICE DRAP1^ENSG00000175550.8 chr11:65920972:+ FGD5^ENSG00000154783.12 chr3:14819687:+ NO_LDAS 0.0102 GT 1.9656 AG 0.9056 ["INTERCHROMOSOMAL[chr11--chr3]"] DRAM2--POLH 1 0 1.00 0.00 ONLY_REF_SPLICE DRAM2^ENSG00000156171.15 chr1:111131424:- POLH^ENSG00000170734.12 chr6:43582316:+ YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr6]"] DRAM1--MREG 1 0 1.00 0.00 ONLY_REF_SPLICE DRAM1^ENSG00000136048.14 chr12:101890221:+ MREG^ENSG00000118242.16 chr2:215996465:- NO_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr2]"] DOCK6--FKBP6 1 0 1.00 0.00 INCL_NON_REF_SPLICE DOCK6^ENSG00000130158.14 chr19:11243066:- FKBP6^ENSG00000077800.13 chr7:73353234:+ NO_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr7]"] DOCK11--ADAM10 1 0 1.00 0.00 ONLY_REF_SPLICE DOCK11^ENSG00000147251.16 chrX:118496073:+ ADAM10^ENSG00000137845.15 chr15:58682314:- YES_LDAS 0.0102 GT 1.5301 AG 1.8256 ["INTERCHROMOSOMAL[chrX--chr15]"] DOCK10--MTRNR2L12 1 0 0.50 0.00 INCL_NON_REF_SPLICE DOCK10^ENSG00000135905.20 chr2:224793400:- MTRNR2L12^ENSG00000269028.3 chr3:96617452:- NO_LDAS 0.0051 GT 1.6402 AG 1.2419 ["INTERCHROMOSOMAL[chr2--chr3]"] DOCK10--EPB41L5 1 0 1.00 0.00 INCL_NON_REF_SPLICE DOCK10^ENSG00000135905.20 chr2:224773244:- EPB41L5^ENSG00000115109.14 chr2:120177397:+ NO_LDAS 0.0102 GT 1.8323 AG 1.5546 ["INTRACHROMOSOMAL[chr2:104.59Mb]"] DOCK10--CUL3 1 0 1.00 0.00 ONLY_REF_SPLICE DOCK10^ENSG00000135905.20 chr2:224916695:- CUL3^ENSG00000036257.13 chr2:224557856:- YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr2:0.18Mb]"] DOCK10--BARD1 1 0 1.00 0.00 ONLY_REF_SPLICE DOCK10^ENSG00000135905.20 chr2:224946847:- BARD1^ENSG00000138376.11 chr2:214781509:- NO_LDAS 0.0102 GT 1.8892 AG 1.4566 ["INTRACHROMOSOMAL[chr2:9.96Mb]"] DNMT3A--RNF135 1 0 1.00 0.00 ONLY_REF_SPLICE DNMT3A^ENSG00000119772.17 chr2:25313913:- RNF135^ENSG00000181481.14 chr17:30984617:+ YES_LDAS 0.0102 GT 1.4295 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr17]"] DNAJC9--KAT6B 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJC9^ENSG00000213551.7 chr10:73243843:- KAT6B^ENSG00000156650.14 chr10:74838683:+ NO_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr10:1.58Mb]"] DNAJC3--PCCA 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJC3^ENSG00000102580.15 chr13:95760798:+ PCCA^ENSG00000175198.17 chr13:100368472:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTRACHROMOSOMAL[chr13:4.29Mb]"] DNAJC25--ZDBF2 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJC25^ENSG00000059769.20 chr9:111631743:+ ZDBF2^ENSG00000204186.10 chr2:206279540:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr2]"] DNAJC21--SUB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNAJC21^ENSG00000168724.17 chr5:34954944:+ SUB1^ENSG00000113387.12 chr5:32601005:+ YES_LDAS 0.0102 GT 1.7968 AG 1.6402 ["INTRACHROMOSOMAL[chr5:2.33Mb]"] DNAJC21--OAS3 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJC21^ENSG00000168724.17 chr5:34929916:+ OAS3^ENSG00000111331.14 chr12:112946743:+ NO_LDAS 0.0102 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr5--chr12]"] DNAJC17--RAP1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNAJC17^ENSG00000104129.10 chr15:40765820:- RAP1A^ENSG00000116473.14 chr1:111703336:+ YES_LDAS 0.0102 GT 1.7232 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr1]"] DNAJB1--AC092368.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNAJB1^ENSG00000132002.9 chr19:14516769:- AC092368.1^ENSG00000260251.1 chr16:46573783:+ NO_LDAS 0.0102 GT 1.7056 AG 1.5329 ["INTERCHROMOSOMAL[chr19--chr16]"] DNAJA3--QRICH1 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJA3^ENSG00000103423.14 chr16:4426092:+ QRICH1^ENSG00000198218.11 chr3:49077038:- NO_LDAS 0.0102 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr3]"] DNAJA3--NIBAN1 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJA3^ENSG00000103423.14 chr16:4426092:+ NIBAN1^ENSG00000135842.17 chr1:184831962:- YES_LDAS 0.0102 GT 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr16--chr1]"] DNAH1--CCZ1 1 0 0.50 0.00 ONLY_REF_SPLICE DNAH1^ENSG00000114841.17 chr3:52353633:+ CCZ1^ENSG00000122674.12 chr7:5900855:+ YES_LDAS 0.0051 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr7]"] DMTF1--NRDC 1 0 1.00 0.00 INCL_NON_REF_SPLICE DMTF1^ENSG00000135164.19 chr7:87195125:+ NRDC^ENSG00000078618.22 chr1:51794854:- YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr1]"] DMPK--DMWD 1 0 1.00 0.00 ONLY_REF_SPLICE DMPK^ENSG00000104936.19 chr19:45771568:- DMWD^ENSG00000185800.12 chr19:45791087:- YES_LDAS 0.0102 GT 1.5656 AG 1.8062 ["INTRACHROMOSOMAL[chr19:0.00Mb]","LOCAL_REARRANGEMENT:-:[395]"] DLST--MIR4500HG 1 0 1.00 0.00 INCL_NON_REF_SPLICE DLST^ENSG00000119689.15 chr14:74900297:+ MIR4500HG^ENSG00000228824.7 chr13:87670992:- NO_LDAS 0.0102 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr14--chr13]"] DLGAP1--PTPRM 1 0 1.00 0.00 ONLY_REF_SPLICE DLGAP1^ENSG00000170579.17 chr18:4005116:- PTPRM^ENSG00000173482.17 chr18:8244058:+ YES_LDAS 0.0102 GT 1.8062 AG 1.7465 ["INTRACHROMOSOMAL[chr18:3.11Mb]"] DLGAP1--CKS1B 1 0 1.00 0.00 ONLY_REF_SPLICE DLGAP1^ENSG00000170579.17 chr18:4005116:- CKS1B^ENSG00000173207.13 chr1:154977987:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr1]"] DLG2--SEPHS1 1 0 1.00 0.00 ONLY_REF_SPLICE DLG2^ENSG00000150672.18 chr11:85626599:- SEPHS1^ENSG00000086475.15 chr10:13345028:- NO_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr10]"] DLEU2--SPRYD7 1 0 1.00 0.00 ONLY_REF_SPLICE DLEU2^ENSG00000231607.13 chr13:50068097:- SPRYD7^ENSG00000123178.15 chr13:49921580:- YES_LDAS 0.0102 GT 1.8062 AG 1.8892 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[20180]"] DISP3--ILF3 1 0 1.00 0.00 ONLY_REF_SPLICE DISP3^ENSG00000204624.8 chr1:11479372:+ ILF3^ENSG00000129351.17 chr19:10681993:+ YES_LDAS 0.0102 GT 1.6895 AG 1.4295 ["INTERCHROMOSOMAL[chr1--chr19]"] DIP2B--SPATS2 1 0 1.00 0.00 ONLY_REF_SPLICE DIP2B^ENSG00000066084.13 chr12:50505240:+ SPATS2^ENSG00000123352.18 chr12:49460770:+ YES_LDAS 0.0102 GT 1.8295 AG 1.8892 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr12:0.98Mb]"] DIP2B--RACGAP1 1 0 1.00 0.00 ONLY_REF_SPLICE DIP2B^ENSG00000066084.13 chr12:50741539:+ RACGAP1^ENSG00000161800.13 chr12:50016719:- YES_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr12:0.47Mb]"] DIDO1--ZNF90 1 0 1.00 0.00 INCL_NON_REF_SPLICE DIDO1^ENSG00000101191.17 chr20:62880924:- ZNF90^ENSG00000213988.11 chr19:20079895:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr19]"] DICER1--EGR1 1 0 0.20 0.00 INCL_NON_REF_SPLICE DICER1^ENSG00000100697.15 chr14:95103633:- EGR1^ENSG00000120738.8 chr5:138465903:+ NO_LDAS 0.002 GT 1.9656 AG 1.4566 ["INTERCHROMOSOMAL[chr14--chr5]"] DHX9--PRRG1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DHX9^ENSG00000135829.17 chr1:182876508:+ PRRG1^ENSG00000130962.18 chrX:37455762:+ NO_LDAS 0.0102 GT 1.5058 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chrX]"] DHX34--RCC2 1 0 1.00 0.00 ONLY_REF_SPLICE DHX34^ENSG00000134815.19 chr19:47362693:+ RCC2^ENSG00000179051.14 chr1:17416646:- NO_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] DHRS7--GPBP1 1 0 1.00 0.00 ONLY_REF_SPLICE DHRS7^ENSG00000100612.14 chr14:60149353:- GPBP1^ENSG00000062194.16 chr5:57230846:+ YES_LDAS 0.0102 GT 1.5219 AG 1.7232 ["INTERCHROMOSOMAL[chr14--chr5]"] DGUOK-AS1--CHD1 1 0 1.00 0.00 ONLY_REF_SPLICE DGUOK-AS1^ENSG00000237883.2 chr2:73981109:- CHD1^ENSG00000153922.11 chr5:98872201:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr5]"] DGCR8--THBS3 1 0 1.00 0.00 INCL_NON_REF_SPLICE DGCR8^ENSG00000128191.16 chr22:20086683:+ THBS3^ENSG00000169231.13 chr1:155198194:- NO_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr1]"] DGCR5--MSH5 1 0 1.00 0.00 INCL_NON_REF_SPLICE DGCR5^ENSG00000273032.3 chr22:19020061:+ MSH5^ENSG00000204410.16 chr6:31743808:+ NO_LDAS 0.0102 GT 1.6402 AG 1.5656 ["INTERCHROMOSOMAL[chr22--chr6]"] DGCR2--LARGE1 1 0 1.00 0.00 ONLY_REF_SPLICE DGCR2^ENSG00000070413.20 chr22:19122128:- LARGE1^ENSG00000133424.22 chr22:33856802:- YES_LDAS 0.0102 GT 1.7056 AG 1.6729 ["INTRACHROMOSOMAL[chr22:14.04Mb]"] DGCR2--CERK 1 0 1.00 0.00 ONLY_REF_SPLICE DGCR2^ENSG00000070413.20 chr22:19089368:- CERK^ENSG00000100422.14 chr22:46687206:- YES_LDAS 0.0102 GT 1.9086 AG 1.9219 ["INTRACHROMOSOMAL[chr22:27.56Mb]"] DFFA--CDC42 1 0 1.00 0.00 ONLY_REF_SPLICE DFFA^ENSG00000160049.12 chr1:10472323:- CDC42^ENSG00000070831.17 chr1:22078429:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr1:11.55Mb]"] DESI2--MTX2 1 0 1.00 0.00 ONLY_REF_SPLICE DESI2^ENSG00000121644.19 chr1:244653355:+ MTX2^ENSG00000128654.14 chr2:176296860:+ NO_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr2]"] DESI1--NCAPD3 1 0 1.00 0.00 ONLY_REF_SPLICE DESI1^ENSG00000100418.8 chr22:41620752:- NCAPD3^ENSG00000151503.13 chr11:134153363:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr11]"] DEPTOR--TULP4 1 0 1.00 0.00 ONLY_REF_SPLICE DEPTOR^ENSG00000155792.10 chr8:119873968:+ TULP4^ENSG00000130338.13 chr6:158312051:+ YES_LDAS 0.0102 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr6]"] DEPDC5--BTAF1 1 0 1.00 0.00 ONLY_REF_SPLICE DEPDC5^ENSG00000100150.20 chr22:31845237:+ BTAF1^ENSG00000095564.14 chr10:91994535:+ YES_LDAS 0.0102 GT 1.9219 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr10]"] DENND6B--MRPS18B 1 0 1.00 0.00 ONLY_REF_SPLICE DENND6B^ENSG00000205593.12 chr22:50314605:- MRPS18B^ENSG00000204568.12 chr6:30624883:+ YES_LDAS 0.0102 GT 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr6]"] DEF8--MFSD10 1 0 1.00 0.00 ONLY_REF_SPLICE DEF8^ENSG00000140995.17 chr16:89948814:+ MFSD10^ENSG00000109736.15 chr4:2933944:- NO_LDAS 0.0102 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr16--chr4]"] DEF6--ARMH3 1 0 1.00 0.00 ONLY_REF_SPLICE DEF6^ENSG00000023892.11 chr6:35297952:+ ARMH3^ENSG00000120029.13 chr10:102006633:- YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr10]"] DECR1--EIF3E 1 0 1.00 0.00 ONLY_REF_SPLICE DECR1^ENSG00000104325.7 chr8:90001561:+ EIF3E^ENSG00000104408.11 chr8:108229195:- NO_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr8:18.11Mb]"] DDX55--TMED2 1 0 1.00 0.00 ONLY_REF_SPLICE DDX55^ENSG00000111364.16 chr12:123608829:+ TMED2^ENSG00000086598.11 chr12:123596605:+ YES_LDAS 0.0102 GT 1.6729 AG 1.5329 ["INTRACHROMOSOMAL[chr12:0.00Mb]","LOCAL_REARRANGEMENT:+:[3495]"] DDX39B--TTC37 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX39B^ENSG00000198563.14 chr6:31530910:- TTC37^ENSG00000198677.12 chr5:95467902:- NO_LDAS 0.0102 GT 1.5058 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr5]"] DDX39B--EHMT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX39B^ENSG00000198563.14 chr6:31538753:- EHMT2^ENSG00000204371.11 chr6:31892910:- YES_LDAS 0.0102 GT 1.8892 AG 1.6402 ["DEEPEST2019","INTRACHROMOSOMAL[chr6:0.34Mb]"] DDX27--ZNFX1 1 0 1.00 0.00 ONLY_REF_SPLICE DDX27^ENSG00000124228.15 chr20:49223433:+ ZNFX1^ENSG00000124201.15 chr20:49253811:- NO_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr20:0.01Mb]","NEIGHBORS_OVERLAP:+:-:[6131]"] DDX24--AL022099.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX24^ENSG00000089737.17 chr14:94051188:- AL022099.1^ENSG00000271162.1 chr6:48952713:- NO_LDAS 0.0102 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr14--chr6]"] DDX23--GALNT6 1 0 1.00 0.00 ONLY_REF_SPLICE DDX23^ENSG00000174243.10 chr12:48852084:- GALNT6^ENSG00000139629.16 chr12:51379884:- YES_LDAS 0.0102 GT 1.9656 AG 1.8323 ["INTRACHROMOSOMAL[chr12:2.50Mb]"] DDX1--STK24 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX1^ENSG00000079785.16 chr2:15618270:+ STK24^ENSG00000102572.15 chr13:98449937:- NO_LDAS 0.0102 GT 1.7968 AG 1.3710 ["INTERCHROMOSOMAL[chr2--chr13]"] DDRGK1--MFSD4B 1 0 1.00 0.00 ONLY_REF_SPLICE DDRGK1^ENSG00000198171.13 chr20:3203213:- MFSD4B^ENSG00000173214.7 chr6:111262257:+ YES_LDAS 0.0102 GT 1.9899 AG 1.7056 ["INTERCHROMOSOMAL[chr20--chr6]"] DDHD1--PCNX4 1 0 1.00 0.00 ONLY_REF_SPLICE DDHD1^ENSG00000100523.16 chr14:53103683:- PCNX4^ENSG00000126773.13 chr14:60115719:+ YES_LDAS 0.0102 GT 1.5058 AG 1.7819 ["INTRACHROMOSOMAL[chr14:6.94Mb]"] DDB1--ZNF511 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDB1^ENSG00000167986.15 chr11:61331543:- ZNF511^ENSG00000198546.15 chr10:133311817:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr10]"] DDB1--ZDHHC11 1 0 0.50 0.00 INCL_NON_REF_SPLICE DDB1^ENSG00000167986.15 chr11:61329363:- ZDHHC11^ENSG00000188818.12 chr5:796411:- NO_LDAS 0.0051 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr5]"] DDB1--VASH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDB1^ENSG00000167986.15 chr11:61332908:- VASH2^ENSG00000143494.15 chr1:212991145:+ NO_LDAS 0.0102 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr1]"] DDAH1--AL356653.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE DDAH1^ENSG00000153904.21 chr1:85464800:- AL356653.1^ENSG00000233514.1 chr1:44122217:- NO_LDAS 0.0051 GT 1.7232 AG 1.4295 ["INTRACHROMOSOMAL[chr1:41.20Mb]"] DCP1A--DCAF8 1 0 1.00 0.00 ONLY_REF_SPLICE DCP1A^ENSG00000272886.6 chr3:53304177:- DCAF8^ENSG00000132716.19 chr1:160238747:- NO_LDAS 0.0102 GT 1.8323 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr1]"] DCAF7--SEC23A 1 0 1.00 0.00 ONLY_REF_SPLICE DCAF7^ENSG00000136485.15 chr17:63550815:+ SEC23A^ENSG00000100934.15 chr14:39076093:- NO_LDAS 0.0102 GT 1.6729 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr14]"] DCAF16--FKBP15 1 0 1.00 0.00 ONLY_REF_SPLICE DCAF16^ENSG00000163257.11 chr4:17810447:- FKBP15^ENSG00000119321.9 chr9:113188491:- YES_LDAS 0.0102 GT 1.3996 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr9]"] DCAF1--IPPK 1 0 1.00 0.00 ONLY_REF_SPLICE DCAF1^ENSG00000145041.15 chr3:51483719:- IPPK^ENSG00000127080.10 chr9:92619565:- YES_LDAS 0.0102 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr9]"] DBT--UBE2V1 1 0 1.00 0.00 ONLY_REF_SPLICE DBT^ENSG00000137992.15 chr1:100214817:- UBE2V1^ENSG00000244687.12 chr20:50084254:- YES_LDAS 0.0102 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr20]"] DBNDD2--SYS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DBNDD2^ENSG00000244274.8 chr20:45410255:+ SYS1^ENSG00000204070.10 chr20:45366875:+ YES_LDAS 0.0102 GT 1.8256 AG 1.5850 ["INTRACHROMOSOMAL[chr20:0.03Mb]","LOCAL_REARRANGEMENT:+:[29259]"] DBN1--UNC45A 1 0 0.17 0.00 INCL_NON_REF_SPLICE DBN1^ENSG00000113758.13 chr5:177460663:- UNC45A^ENSG00000140553.18 chr15:90935559:+ NO_LDAS 0.0017 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr15]"] DAP3--CUX1 1 0 1.00 0.00 ONLY_REF_SPLICE DAP3^ENSG00000132676.16 chr1:155689174:+ CUX1^ENSG00000257923.12 chr7:102070339:+ YES_LDAS 0.0102 GT 1.9219 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr7]"] DAP--MARCHF6 1 0 1.00 0.00 ONLY_REF_SPLICE DAP^ENSG00000112977.16 chr5:10748175:- MARCHF6^ENSG00000145495.16 chr5:10377798:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8256 ["INTRACHROMOSOMAL[chr5:0.24Mb]"] DANCR--UBE2D2 1 0 1.00 0.00 ONLY_REF_SPLICE DANCR^ENSG00000226950.8 chr4:52712959:+ UBE2D2^ENSG00000131508.16 chr5:139600372:+ YES_LDAS 0.0102 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr5]"] DANCR--TMOD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE DANCR^ENSG00000226950.8 chr4:52714015:+ TMOD3^ENSG00000138594.14 chr15:51887694:+ NO_LDAS 0.0102 GT 1.5219 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr15]"] DANCR--FOXO1 1 0 1.00 0.00 ONLY_REF_SPLICE DANCR^ENSG00000226950.8 chr4:52712959:+ FOXO1^ENSG00000150907.10 chr13:40560860:- YES_LDAS 0.0102 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr13]"] CYTOR--TSC2 1 0 0.50 0.00 ONLY_REF_SPLICE CYTOR^ENSG00000222041.11 chr2:87583346:+ TSC2^ENSG00000103197.18 chr16:2079035:+ YES_LDAS 0.0051 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr16]"] CYTH1--GTF2I 1 0 1.00 0.00 ONLY_REF_SPLICE CYTH1^ENSG00000108669.16 chr17:78708197:- GTF2I^ENSG00000263001.7 chr7:74705164:+ YES_LDAS 0.0102 GT 1.7465 AG 1.5329 ["INTERCHROMOSOMAL[chr17--chr7]"] CYTH1--CYTH4 1 0 1.00 0.00 ONLY_REF_SPLICE CYTH1^ENSG00000108669.16 chr17:78701671:- CYTH4^ENSG00000100055.21 chr22:37300907:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr17--chr22]"] CYP20A1--SPECC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYP20A1^ENSG00000119004.16 chr2:203245895:+ SPECC1^ENSG00000128487.18 chr17:20315855:+ NO_LDAS 0.0102 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr17]"] CYHR1--ACD 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYHR1^ENSG00000187954.13 chr8:144464809:- ACD^ENSG00000102977.17 chr16:67660781:- NO_LDAS 0.0102 GT 1.8062 AG 1.7232 ["INTERCHROMOSOMAL[chr8--chr16]"] CYC1--PSMA3 1 0 1.00 0.00 ONLY_REF_SPLICE CYC1^ENSG00000179091.5 chr8:144095228:+ PSMA3^ENSG00000100567.13 chr14:58257745:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr14]"] CYBB--EFNA5 1 0 1.00 0.00 ONLY_REF_SPLICE CYBB^ENSG00000165168.8 chrX:37783600:+ EFNA5^ENSG00000184349.14 chr5:107427509:- YES_LDAS 0.0102 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr5]"] CYB5R4--NEK7 1 0 1.00 0.00 ONLY_REF_SPLICE CYB5R4^ENSG00000065615.14 chr6:83893622:+ NEK7^ENSG00000151414.15 chr1:198253040:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr1]"] CYB5A--ZNF407 1 0 1.00 0.00 ONLY_REF_SPLICE CYB5A^ENSG00000166347.19 chr18:74260915:- ZNF407^ENSG00000215421.9 chr18:74630967:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr18:0.31Mb]"] CXXC1--RPS24P21 1 0 1.00 0.00 INCL_NON_REF_SPLICE CXXC1^ENSG00000154832.16 chr18:50286539:- RPS24P21^ENSG00000230249.1 chrX:3112988:- NO_LDAS 0.0102 GT 1.7232 AG 1.7465 ["INTERCHROMOSOMAL[chr18--chrX]"] CWF19L2--ZDHHC4 1 0 1.00 0.00 ONLY_REF_SPLICE CWF19L2^ENSG00000152404.15 chr11:107353524:- ZDHHC4^ENSG00000136247.15 chr7:6577590:+ YES_LDAS 0.0102 GT 1.8256 AG 1.4716 ["INTERCHROMOSOMAL[chr11--chr7]"] CWF19L1--OGA 1 0 1.00 0.00 ONLY_REF_SPLICE CWF19L1^ENSG00000095485.18 chr10:100267571:- OGA^ENSG00000198408.14 chr10:101807901:- YES_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr10:1.52Mb]"] CWC27--MIER3 1 0 1.00 0.00 ONLY_REF_SPLICE CWC27^ENSG00000153015.16 chr5:64774787:+ MIER3^ENSG00000155545.20 chr5:56939017:- YES_LDAS 0.0102 GT 1.8062 AG 1.9329 ["INTRACHROMOSOMAL[chr5:7.80Mb]"] CWC25--RPRD1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE CWC25^ENSG00000273559.5 chr17:38812837:- RPRD1B^ENSG00000101413.12 chr20:38057532:+ NO_LDAS 0.0102 GT 1.2310 AG 1.3383 ["INTERCHROMOSOMAL[chr17--chr20]"] CUX1--SRP9 1 0 0.50 0.00 ONLY_REF_SPLICE CUX1^ENSG00000257923.12 chr7:101916225:+ SRP9^ENSG00000143742.14 chr1:225777935:+ NO_LDAS 0.0051 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr1]"] CUX1--DGAT2 1 0 1.00 0.00 ONLY_REF_SPLICE CUX1^ENSG00000257923.12 chr7:101816093:+ DGAT2^ENSG00000062282.15 chr11:75784618:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr11]"] CUTC--ING5 1 0 1.00 0.00 INCL_NON_REF_SPLICE CUTC^ENSG00000119929.13 chr10:99755778:+ ING5^ENSG00000168395.16 chr2:241711978:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr2]"] CUL3--NECAP2 1 0 1.00 0.00 ONLY_REF_SPLICE CUL3^ENSG00000036257.13 chr2:224584944:- NECAP2^ENSG00000157191.20 chr1:16451838:+ YES_LDAS 0.0102 GT 1.8062 AG 1.4716 ["INTERCHROMOSOMAL[chr2--chr1]"] CUL2--MSTO1 1 0 0.50 0.00 ONLY_REF_SPLICE CUL2^ENSG00000108094.16 chr10:35029488:- MSTO1^ENSG00000125459.17 chr1:155611039:+ YES_LDAS 0.0051 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr1]"] CUL1--NPIPB3 1 0 0.33 0.00 INCL_NON_REF_SPLICE CUL1^ENSG00000055130.17 chr7:148737743:+ NPIPB3^ENSG00000169246.16 chr16:21431567:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr16]"] CUL1--IPO11 1 0 1.00 0.00 ONLY_REF_SPLICE CUL1^ENSG00000055130.17 chr7:148699029:+ IPO11^ENSG00000086200.17 chr5:62437274:+ NO_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr5]"] CTSS--SEPTIN6 1 0 1.00 0.00 ONLY_REF_SPLICE CTSS^ENSG00000163131.12 chr1:150747777:- SEPTIN6^ENSG00000125354.24 chrX:119653040:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chrX]"] CTSC--RAB38 1 0 1.00 0.00 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88296133:- RAB38^ENSG00000123892.12 chr11:88149955:- YES_LDAS 0.0102 GT 1.9899 AG 1.8062 ["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[89626]"] CTSC--JAK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88294044:- JAK1^ENSG00000162434.13 chr1:64860210:- NO_LDAS 0.0102 GC 1.8256 AG 1.9329 ["TCGA_StarF2019","INTERCHROMOSOMAL[chr11--chr1]"] CTSC--CBFB 1 0 1.00 0.00 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88334937:- CBFB^ENSG00000067955.15 chr16:67066682:+ YES_LDAS 0.0102 GT 1.6049 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr16]"] CTNND1--TRAFD1 1 0 1.00 0.00 ONLY_REF_SPLICE CTNND1^ENSG00000198561.15 chr11:57815500:+ TRAFD1^ENSG00000135148.12 chr12:112130511:+ NO_LDAS 0.0102 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr11--chr12]"] CTDSP1--MCM7 1 0 1.00 0.00 ONLY_REF_SPLICE CTDSP1^ENSG00000144579.8 chr2:218402405:+ MCM7^ENSG00000166508.18 chr7:100093401:- YES_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr7]"] CTDNEP1--NAB2 1 0 0.50 0.00 INCL_NON_REF_SPLICE CTDNEP1^ENSG00000175826.12 chr17:7244031:- NAB2^ENSG00000166886.13 chr12:57093174:+ NO_LDAS 0.0051 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr12]"] CTDNEP1--IBTK 1 0 0.50 0.00 INCL_NON_REF_SPLICE CTDNEP1^ENSG00000175826.12 chr17:7244031:- IBTK^ENSG00000005700.15 chr6:82240236:- NO_LDAS 0.0051 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr6]"] CTDNEP1--CPTP 1 0 1.00 0.00 INCL_NON_REF_SPLICE CTDNEP1^ENSG00000175826.12 chr17:7243886:- CPTP^ENSG00000224051.7 chr1:1326856:+ NO_LDAS 0.0102 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr1]"] CTC-338M12.4--PCBP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CTC-338M12.4^ENSG00000233937.7 chr5:181257237:+ PCBP2^ENSG00000197111.16 chr12:53459272:+ NO_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr12]"] CSPP1--UBE2W 1 0 1.00 0.00 ONLY_REF_SPLICE CSPP1^ENSG00000104218.16 chr8:67064538:+ UBE2W^ENSG00000104343.21 chr8:73830472:- NO_LDAS 0.0102 GT 1.7232 AG 1.5546 ["INTRACHROMOSOMAL[chr8:6.58Mb]"] CSNK2B--CDK16 1 0 1.00 0.00 ONLY_REF_SPLICE CSNK2B^ENSG00000204435.15 chr6:31669172:+ CDK16^ENSG00000102225.16 chrX:47224385:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chrX]"] CSNK2A3--PSTK 1 0 1.00 0.00 INCL_NON_REF_SPLICE CSNK2A3^ENSG00000254598.3 chr11:11352904:- PSTK^ENSG00000179988.15 chr10:122983004:+ NO_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr10]"] CSNK2A1--RNF111 1 0 1.00 0.00 ONLY_REF_SPLICE CSNK2A1^ENSG00000101266.19 chr20:495719:- RNF111^ENSG00000157450.16 chr15:59030804:+ YES_LDAS 0.0102 GT 1.7465 AG 1.8295 ["INTERCHROMOSOMAL[chr20--chr15]"] CSNK1G2--TUBA1B 1 0 0.25 0.00 INCL_NON_REF_SPLICE CSNK1G2^ENSG00000133275.16 chr19:1969675:+ TUBA1B^ENSG00000123416.15 chr12:49129346:- YES_LDAS 0.0025 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr12]"] CSNK1G2--RETREG1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CSNK1G2^ENSG00000133275.16 chr19:1941242:+ RETREG1^ENSG00000154153.14 chr5:16616947:- NO_LDAS 0.0102 GT 1.4716 AG 1.5301 ["INTERCHROMOSOMAL[chr19--chr5]"] CSNK1D--METTL2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE CSNK1D^ENSG00000141551.14 chr17:82249431:- METTL2A^ENSG00000087995.16 chr17:62440741:+ NO_LDAS 0.0102 GT 1.7968 AG 1.9329 ["INTRACHROMOSOMAL[chr17:19.79Mb]"] CSGALNACT1--PMS1 1 0 1.00 0.00 ONLY_REF_SPLICE CSGALNACT1^ENSG00000147408.14 chr8:19505201:- PMS1^ENSG00000064933.18 chr2:189791790:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr2]"] CSDE1--TRIP12 1 0 1.00 0.00 ONLY_REF_SPLICE CSDE1^ENSG00000009307.16 chr1:114757925:- TRIP12^ENSG00000153827.14 chr2:229880128:- YES_LDAS 0.0102 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr2]"] CROCCP2--SLC12A4 1 0 1.00 0.00 ONLY_REF_SPLICE CROCCP2^ENSG00000215908.10 chr1:16625775:- SLC12A4^ENSG00000124067.17 chr16:67952425:- YES_LDAS 0.0102 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr16]"] CRK--AC008105.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRK^ENSG00000167193.8 chr17:1456038:- AC008105.1^ENSG00000233175.2 chr17:45241620:- NO_LDAS 0.0102 GC 1.4566 AG 1.4716 ["INTRACHROMOSOMAL[chr17:43.77Mb]"] CRIM1--PPP1R21 1 0 1.00 0.00 ONLY_REF_SPLICE CRIM1^ENSG00000150938.10 chr2:36356623:+ PPP1R21^ENSG00000162869.16 chr2:48451008:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9899 ["INTRACHROMOSOMAL[chr2:11.89Mb]"] CRIM1--FEZ2 1 0 1.00 0.00 ONLY_REF_SPLICE CRIM1^ENSG00000150938.10 chr2:36396787:+ FEZ2^ENSG00000171055.15 chr2:36558513:- YES_LDAS 0.0102 GT 1.4566 AG 1.8892 ["Klijn_CellLines","INTRACHROMOSOMAL[chr2:0.02Mb]","NEIGHBORS_OVERLAP:+:-:[19330]"] CREM--AK6 1 0 1.00 0.00 ONLY_REF_SPLICE CREM^ENSG00000095794.19 chr10:35148491:+ AK6^ENSG00000085231.14 chr5:69366595:- YES_LDAS 0.0102 GT 1.9086 AG 1.9219 ["INTERCHROMOSOMAL[chr10--chr5]"] CRCP--PSME3IP1 1 0 1.00 0.00 ONLY_REF_SPLICE CRCP^ENSG00000241258.7 chr7:66134374:+ PSME3IP1^ENSG00000172775.17 chr16:57173869:- YES_LDAS 0.0102 GT 1.8323 AG 1.5546 ["INTERCHROMOSOMAL[chr7--chr16]"] CRCP--AL390964.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRCP^ENSG00000241258.7 chr7:66145504:+ AL390964.1^ENSG00000277047.5 chr13:54984954:+ NO_LDAS 0.0102 GT 1.9656 AG 1.2729 ["INTERCHROMOSOMAL[chr7--chr13]"] CPT1B--AC090984.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CPT1B^ENSG00000205560.13 chr22:50570289:- AC090984.1^ENSG00000279033.1 chr15:77484764:- NO_LDAS 0.0102 GT 1.8256 AG 1.7968 ["INTERCHROMOSOMAL[chr22--chr15]"] CPSF7--SMARCC1 1 0 1.00 0.00 ONLY_REF_SPLICE CPSF7^ENSG00000149532.16 chr11:61429182:- SMARCC1^ENSG00000173473.11 chr3:47772936:- YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr3]"] CPSF4--SRC 1 0 1.00 0.00 INCL_NON_REF_SPLICE CPSF4^ENSG00000160917.15 chr7:99452948:+ SRC^ENSG00000197122.12 chr20:37384175:+ YES_LDAS 0.0102 GC 1.2419 AG 1.8062 ["INTERCHROMOSOMAL[chr7--chr20]"] CPSF2--NDUFB1 1 0 1.00 0.00 ONLY_REF_SPLICE CPSF2^ENSG00000165934.13 chr14:92131133:+ NDUFB1^ENSG00000183648.11 chr14:92117642:- YES_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr14:0.00Mb]","LOCAL_INVERSION:+:-:[52]"] CPNE8--ZNF18 1 0 0.50 0.00 ONLY_REF_SPLICE CPNE8^ENSG00000139117.14 chr12:38873004:- ZNF18^ENSG00000154957.14 chr17:11993654:- YES_LDAS 0.0051 GT 1.2729 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr17]"] CPNE8--TCF12 1 0 1.00 0.00 ONLY_REF_SPLICE CPNE8^ENSG00000139117.14 chr12:38905437:- TCF12^ENSG00000140262.18 chr15:57251350:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr15]"] CPNE8--CTRB1 1 0 0.50 0.00 ONLY_REF_SPLICE CPNE8^ENSG00000139117.14 chr12:38873004:- CTRB1^ENSG00000168925.12 chr16:75225644:+ YES_LDAS 0.0051 GT 1.2729 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr16]"] CPEB1--TKT 1 0 1.00 0.00 ONLY_REF_SPLICE CPEB1^ENSG00000214575.9 chr15:82627193:- TKT^ENSG00000163931.16 chr3:53237921:- NO_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr3]"] CORO7--HSH2D 1 0 1.00 0.00 ONLY_REF_SPLICE CORO7^ENSG00000262246.6 chr16:4387986:- HSH2D^ENSG00000196684.12 chr19:16152552:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr19]"] CORO1C--UNKL 1 0 1.00 0.00 ONLY_REF_SPLICE CORO1C^ENSG00000110880.11 chr12:108731429:- UNKL^ENSG00000059145.19 chr16:1371611:- YES_LDAS 0.0102 GT 1.5628 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr16]"] COQ9--COL20A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE COQ9^ENSG00000088682.14 chr16:57457015:+ COL20A1^ENSG00000101203.16 chr20:63319303:+ NO_LDAS 0.0102 GT 1.7056 AG 1.6049 ["INTERCHROMOSOMAL[chr16--chr20]"] COQ6--ATP5F1A 1 0 1.00 0.00 ONLY_REF_SPLICE COQ6^ENSG00000119723.17 chr14:73955928:+ ATP5F1A^ENSG00000152234.16 chr18:46091851:- YES_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr18]"] COQ4--C1orf43 1 0 1.00 0.00 ONLY_REF_SPLICE COQ4^ENSG00000167113.11 chr9:128325881:+ C1orf43^ENSG00000143612.21 chr1:154214574:- YES_LDAS 0.0102 GT 1.9656 AG 1.7056 ["INTERCHROMOSOMAL[chr9--chr1]"] COPS5P2--COPS5 1 0 1.00 0.00 INCL_NON_REF_SPLICE COPS5P2^ENSG00000270445.1 chr12:123441698:- COPS5^ENSG00000121022.14 chr8:67045915:- NO_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr8]"] COPRS--MGAT3 1 0 1.00 0.00 ONLY_REF_SPLICE COPRS^ENSG00000172301.11 chr17:31859101:- MGAT3^ENSG00000128268.12 chr22:39487347:+ YES_LDAS 0.0102 GT 1.3383 AG 1.7056 ["INTERCHROMOSOMAL[chr17--chr22]"] COPB2--SNX17 1 0 1.00 0.00 INCL_NON_REF_SPLICE COPB2^ENSG00000184432.11 chr3:139379431:- SNX17^ENSG00000115234.11 chr2:27370739:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr2]"] COPB1--RRAS2P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE COPB1^ENSG00000129083.13 chr11:14443724:- RRAS2P1^ENSG00000236360.2 chr1:52993702:- YES_LDAS 0.0102 GT 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr1]"] COP1--MTDH 1 0 1.00 0.00 ONLY_REF_SPLICE COP1^ENSG00000143207.21 chr1:176149006:- MTDH^ENSG00000147649.10 chr8:97686668:+ YES_LDAS 0.0102 GT 1.2310 AG 1.4256 ["INTERCHROMOSOMAL[chr1--chr8]"] COMMD4--COPE 1 0 1.00 0.00 INCL_NON_REF_SPLICE COMMD4^ENSG00000140365.16 chr15:75338133:+ COPE^ENSG00000105669.14 chr19:18899723:- YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr19]"] COL1A1--C1QL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE COL1A1^ENSG00000108821.14 chr17:50199556:- C1QL2^ENSG00000144119.4 chr2:119158044:- NO_LDAS 0.0102 GT 1.7819 AG 1.5656 ["INTERCHROMOSOMAL[chr17--chr2]"] COG3--THOC2 1 0 1.00 0.00 ONLY_REF_SPLICE COG3^ENSG00000136152.15 chr13:45511854:+ THOC2^ENSG00000125676.20 chrX:123619436:- YES_LDAS 0.0102 GT 1.5546 AG 1.9656 ["INTERCHROMOSOMAL[chr13--chrX]"] COA8--SEPSECS 1 0 1.00 0.00 ONLY_REF_SPLICE COA8^ENSG00000256053.9 chr14:103587364:+ SEPSECS^ENSG00000109618.13 chr4:25159107:- YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr4]"] COA1--FOXJ3 1 0 1.00 0.00 ONLY_REF_SPLICE COA1^ENSG00000106603.19 chr7:43729429:- FOXJ3^ENSG00000198815.9 chr1:42265189:- YES_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr7--chr1]"] CNST--CIB1 1 0 1.00 0.00 ONLY_REF_SPLICE CNST^ENSG00000162852.14 chr1:246566663:+ CIB1^ENSG00000185043.12 chr15:90232327:- YES_LDAS 0.0102 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr15]"] CNR2--RHOA 1 0 1.00 0.00 ONLY_REF_SPLICE CNR2^ENSG00000188822.8 chr1:23913246:- RHOA^ENSG00000067560.14 chr3:49375591:- YES_LDAS 0.0102 GT 0.9968 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr3]"] CNPY3--SIN3A 1 0 1.00 0.00 ONLY_REF_SPLICE CNPY3^ENSG00000137161.17 chr6:42929721:+ SIN3A^ENSG00000169375.16 chr15:75384437:- YES_LDAS 0.0102 GT 1.8062 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr15]"] CNPY3--NPIPB3 1 0 1.00 0.00 ONLY_REF_SPLICE CNPY3^ENSG00000137161.17 chr6:42929721:+ NPIPB3^ENSG00000169246.16 chr16:21406859:- YES_LDAS 0.0102 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr16]"] CNOT3--LENG1 1 0 1.00 0.00 ONLY_REF_SPLICE CNOT3^ENSG00000088038.19 chr19:54149758:+ LENG1^ENSG00000105617.4 chr19:54157025:- YES_LDAS 0.0102 GT 1.7819 AG 1.2729 ["INTRACHROMOSOMAL[chr19:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[520]"] CNOT1--AQR 1 0 1.00 0.00 INCL_NON_REF_SPLICE CNOT1^ENSG00000125107.19 chr16:58526000:- AQR^ENSG00000021776.11 chr15:34869304:- NO_LDAS 0.0102 GC 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr15]"] CNNM4--ZNF761 1 0 1.00 0.00 ONLY_REF_SPLICE CNNM4^ENSG00000158158.12 chr2:96762401:+ ZNF761^ENSG00000160336.16 chr19:53454650:+ YES_LDAS 0.0102 GT 1.7056 AG 1.5656 ["INTERCHROMOSOMAL[chr2--chr19]"] CNN3P1--ZNF318 1 0 1.00 0.00 INCL_NON_REF_SPLICE CNN3P1^ENSG00000218868.1 chr6:6535038:+ ZNF318^ENSG00000171467.16 chr6:43339037:- NO_LDAS 0.0102 GT 1.9329 AG 1.8062 ["INTRACHROMOSOMAL[chr6:36.77Mb]"] CNN2--MIA2 1 0 1.00 0.00 ONLY_REF_SPLICE CNN2^ENSG00000064666.15 chr19:1032696:+ MIA2^ENSG00000150527.17 chr14:39276934:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr14]"] CMSS1--PCNP 1 0 1.00 0.00 ONLY_REF_SPLICE CMSS1^ENSG00000184220.12 chr3:99818043:+ PCNP^ENSG00000081154.12 chr3:101585437:+ NO_LDAS 0.0102 GT 1.5656 AG 1.7232 ["INTRACHROMOSOMAL[chr3:1.39Mb]"] CMIP--EVL 1 0 1.00 0.00 INCL_NON_REF_SPLICE CMIP^ENSG00000153815.17 chr16:81445266:+ EVL^ENSG00000196405.13 chr14:100128666:+ YES_LDAS 0.0102 GC 1.7056 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr14]"] CMC2--ARLNC1 1 0 1.00 0.00 ONLY_REF_SPLICE CMC2^ENSG00000103121.9 chr16:80997314:- ARLNC1^ENSG00000260896.6 chr16:80840222:- YES_LDAS 0.0102 GT 1.7232 AG 1.7056 ["INTRACHROMOSOMAL[chr16:0.07Mb]","NEIGHBORS[73766]"] CLPX--ANKDD1A 1 0 1.00 0.00 ONLY_REF_SPLICE CLPX^ENSG00000166855.9 chr15:65178934:- ANKDD1A^ENSG00000166839.17 chr15:64930822:+ NO_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTRACHROMOSOMAL[chr15:0.19Mb]"] CLN6--GABPA 1 0 1.00 0.00 ONLY_REF_SPLICE CLN6^ENSG00000128973.13 chr15:68218536:- GABPA^ENSG00000154727.11 chr21:25741573:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr21]"] CLN6--FNDC3B 1 0 1.00 0.00 ONLY_REF_SPLICE CLN6^ENSG00000128973.13 chr15:68229502:- FNDC3B^ENSG00000075420.13 chr3:172226871:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr15--chr3]"] CLK1--ORC2 1 0 1.00 0.00 ONLY_REF_SPLICE CLK1^ENSG00000013441.16 chr2:200864564:- ORC2^ENSG00000115942.9 chr2:200933974:- YES_LDAS 0.0102 GT 1.9329 AG 1.8062 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr2:0.04Mb]","LOCAL_REARRANGEMENT:-:[44233]"] CLIC4--TLK1 1 0 1.00 0.00 ONLY_REF_SPLICE CLIC4^ENSG00000169504.15 chr1:24797851:+ TLK1^ENSG00000198586.14 chr2:170997823:- NO_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr2]"] CLECL1--RFTN1 1 0 1.00 0.00 ONLY_REF_SPLICE CLECL1^ENSG00000184293.7 chr12:9732949:- RFTN1^ENSG00000131378.14 chr3:16370279:- YES_LDAS 0.0102 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr3]"] CLECL1--PRH1 1 0 1.00 0.00 ONLY_REF_SPLICE CLECL1^ENSG00000184293.7 chr12:9732949:- PRH1^ENSG00000231887.7 chr12:11047188:- YES_LDAS 0.0102 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr12:1.09Mb]"] CLECL1--CNOT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CLECL1^ENSG00000184293.7 chr12:9732949:- CNOT1^ENSG00000125107.19 chr16:58537957:- NO_LDAS 0.0102 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr16]"] CLEC16A--COPS8 1 0 1.00 0.00 ONLY_REF_SPLICE CLEC16A^ENSG00000038532.16 chr16:11126146:+ COPS8^ENSG00000198612.11 chr2:237094090:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr2]"] CLDND1--HMBOX1 1 0 1.00 0.00 ONLY_REF_SPLICE CLDND1^ENSG00000080822.17 chr3:98517052:- HMBOX1^ENSG00000147421.18 chr8:29048954:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr8]"] CLDN12--ADAM22 1 0 1.00 0.00 ONLY_REF_SPLICE CLDN12^ENSG00000157224.16 chr7:90405612:+ ADAM22^ENSG00000008277.14 chr7:88143026:+ YES_LDAS 0.0102 GT 1.8892 AG 1.5301 ["INTRACHROMOSOMAL[chr7:2.18Mb]"] CLCF1--STK35 1 0 1.00 0.00 ONLY_REF_SPLICE CLCF1^ENSG00000175505.11 chr11:67373524:- STK35^ENSG00000125834.13 chr20:2102768:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr20]"] CLASRP--TRAPPC6A 1 0 1.00 0.00 ONLY_REF_SPLICE CLASRP^ENSG00000104859.15 chr19:45040311:+ TRAPPC6A^ENSG00000007255.10 chr19:45164970:- YES_LDAS 0.0102 GT 1.6895 AG 1.7056 ["INTRACHROMOSOMAL[chr19:0.09Mb]","LOCAL_INVERSION:+:-:[91972]"] CLASRP--AC092720.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CLASRP^ENSG00000104859.15 chr19:45070066:+ AC092720.1^ENSG00000260750.7 chr16:87595837:+ NO_LDAS 0.0102 GT 1.7819 AG 0.9968 ["INTERCHROMOSOMAL[chr19--chr16]"] CLASP1--RMST 1 0 1.00 0.00 INCL_NON_REF_SPLICE CLASP1^ENSG00000074054.20 chr2:121407471:- RMST^ENSG00000255794.9 chr12:97431721:+ NO_LDAS 0.0102 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr12]"] CISD2--MANBA 1 0 1.00 0.00 ONLY_REF_SPLICE CISD2^ENSG00000145354.12 chr4:102869187:+ MANBA^ENSG00000109323.11 chr4:102674070:- NO_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr4:0.11Mb]"] CIRBP--FAN1 1 0 1.00 0.00 ONLY_REF_SPLICE CIRBP^ENSG00000099622.14 chr19:1272051:+ FAN1^ENSG00000198690.10 chr15:30918164:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr15]"] CIAO1--STARD7 1 0 1.00 0.00 ONLY_REF_SPLICE CIAO1^ENSG00000144021.3 chr2:96267924:+ STARD7^ENSG00000084090.14 chr2:96192468:- YES_LDAS 0.0102 GT 1.8256 AG 1.9329 ["INTRACHROMOSOMAL[chr2:0.06Mb]","LOCAL_INVERSION:+:-:[57332]"] CHURC1--AGTPBP1 1 0 1.00 0.00 ONLY_REF_SPLICE CHURC1^ENSG00000258289.9 chr14:64926080:+ AGTPBP1^ENSG00000135049.16 chr9:85646418:- YES_LDAS 0.0102 GT 1.8256 AG 1.8062 ["INTERCHROMOSOMAL[chr14--chr9]"] CHUK--SCD 1 0 1.00 0.00 ONLY_REF_SPLICE CHUK^ENSG00000213341.11 chr10:100217995:- SCD^ENSG00000099194.6 chr10:100360734:+ YES_LDAS 0.0102 GT 1.5058 AG 1.9656 ["INTRACHROMOSOMAL[chr10:0.12Mb]"] CHTF18--DIDO1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHTF18^ENSG00000127586.17 chr16:789625:+ DIDO1^ENSG00000101191.17 chr20:62879529:- NO_LDAS 0.0102 AT 1.5329 AC 1.8323 ["INTERCHROMOSOMAL[chr16--chr20]"] CHST11--STAT3 1 0 1.00 0.00 ONLY_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104601991:+ STAT3^ENSG00000168610.16 chr17:42323354:- NO_LDAS 0.0102 GT 1.7056 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr17]"] CHST11--SNTB2 1 0 1.00 0.00 ONLY_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104457529:+ SNTB2^ENSG00000168807.16 chr16:69245602:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr16]"] CHRNA5--SINHCAF 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHRNA5^ENSG00000169684.13 chr15:78593628:+ SINHCAF^ENSG00000139146.14 chr12:31282871:- YES_LDAS 0.0102 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr15--chr12]"] CHMP4A--RGS4 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHMP4A^ENSG00000254505.11 chr14:24211680:- RGS4^ENSG00000117152.14 chr1:163069341:+ NO_LDAS 0.0102 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr1]"] CHMP4A--NOP9 1 0 1.00 0.00 ONLY_REF_SPLICE CHMP4A^ENSG00000254505.11 chr14:24213409:- NOP9^ENSG00000196943.14 chr14:24303732:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTRACHROMOSOMAL[chr14:0.09Mb]","LOCAL_INVERSION:-:+:[86020]"] CHM--AMY2B 1 0 1.00 0.00 ONLY_REF_SPLICE CHM^ENSG00000188419.14 chrX:86027491:- AMY2B^ENSG00000240038.6 chr1:103565435:+ YES_LDAS 0.0102 GT 1.8295 AG 1.8323 ["INTERCHROMOSOMAL[chrX--chr1]"] CHL1--PARP14 1 0 1.00 0.00 ONLY_REF_SPLICE CHL1^ENSG00000134121.10 chr3:244692:+ PARP14^ENSG00000173193.15 chr3:122685185:+ YES_LDAS 0.0102 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr3:122.27Mb]"] CHFR--LINC00667 1 0 1.00 0.00 ONLY_REF_SPLICE CHFR^ENSG00000072609.18 chr12:132945621:- LINC00667^ENSG00000263753.8 chr18:5241699:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr18]"] CHFR--GLTP 1 0 0.50 0.00 ONLY_REF_SPLICE CHFR^ENSG00000072609.18 chr12:132857405:- GLTP^ENSG00000139433.11 chr12:109858741:- YES_LDAS 0.0051 GC 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr12:22.94Mb]"] CHEK2--SNHG12 1 0 1.00 0.00 ONLY_REF_SPLICE CHEK2^ENSG00000183765.23 chr22:28703505:- SNHG12^ENSG00000197989.14 chr1:28580646:- NO_LDAS 0.0102 GT 1.3710 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr1]"] CHEK2--EEA1 1 0 1.00 0.00 ONLY_REF_SPLICE CHEK2^ENSG00000183765.23 chr22:28699838:- EEA1^ENSG00000102189.17 chr12:92891721:- YES_LDAS 0.0102 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr12]"] CHDH--SNRPB 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHDH^ENSG00000016391.11 chr3:53817153:- SNRPB^ENSG00000125835.19 chr20:2470709:- NO_LDAS 0.0102 GT 1.9219 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr20]"] CHD9--VAC14 1 0 1.00 0.00 ONLY_REF_SPLICE CHD9^ENSG00000177200.17 chr16:53055077:+ VAC14^ENSG00000103043.15 chr16:70772172:- NO_LDAS 0.0102 GT 1.5219 AG 1.8892 ["INTRACHROMOSOMAL[chr16:17.36Mb]"] CHD8--STXBP6 1 0 1.00 0.00 ONLY_REF_SPLICE CHD8^ENSG00000100888.15 chr14:21400875:- STXBP6^ENSG00000168952.15 chr14:24974850:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr14:3.35Mb]"] CHCHD3--HNRNPA1P10 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHCHD3^ENSG00000106554.13 chr7:132838416:- HNRNPA1P10^ENSG00000214223.4 chr19:11666829:- YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr19]"] CGAS--FNBP1L 1 0 1.00 0.00 INCL_NON_REF_SPLICE CGAS^ENSG00000164430.17 chr6:73440209:- FNBP1L^ENSG00000137942.18 chr1:93551587:+ NO_LDAS 0.0102 GT 1.9329 AG 1.3710 ["INTERCHROMOSOMAL[chr6--chr1]"] CFL1--PPFIBP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CFL1^ENSG00000172757.13 chr11:65854948:- PPFIBP1^ENSG00000110841.14 chr12:27692617:+ YES_LDAS 0.0102 GT 1.5546 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr12]"] CFDP1--STAU1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CFDP1^ENSG00000153774.9 chr16:75414661:- STAU1^ENSG00000124214.21 chr20:49124511:- YES_LDAS 0.0102 GT 1.5058 AG 1.5628 ["INTERCHROMOSOMAL[chr16--chr20]"] CERT1--SLF2 1 0 1.00 0.00 ONLY_REF_SPLICE CERT1^ENSG00000113163.18 chr5:75505982:- SLF2^ENSG00000119906.13 chr10:100915999:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr10]"] CERS6--PSMD14 1 0 1.00 0.00 ONLY_REF_SPLICE CERS6^ENSG00000172292.15 chr2:168717978:+ PSMD14^ENSG00000115233.12 chr2:161367478:+ YES_LDAS 0.0102 GT 1.6402 AG 1.9329 ["TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr2:7.04Mb]"] CERS6--LARP4B 1 0 1.00 0.00 ONLY_REF_SPLICE CERS6^ENSG00000172292.15 chr2:168456618:+ LARP4B^ENSG00000107929.15 chr10:885760:- YES_LDAS 0.0102 GT 1.9899 AG 1.9899 ["INTERCHROMOSOMAL[chr2--chr10]"] CERS6--FARP2 1 0 1.00 0.00 ONLY_REF_SPLICE CERS6^ENSG00000172292.15 chr2:168456618:+ FARP2^ENSG00000006607.14 chr2:241403828:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9899 ["INTRACHROMOSOMAL[chr2:72.58Mb]"] CERS6--CPNE8 1 0 1.00 0.00 ONLY_REF_SPLICE CERS6^ENSG00000172292.15 chr2:168456618:+ CPNE8^ENSG00000139117.14 chr12:38776301:- YES_LDAS 0.0102 GT 1.9899 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr12]"] CERS5--TFCP2 1 0 1.00 0.00 ONLY_REF_SPLICE CERS5^ENSG00000139624.14 chr12:50167101:- TFCP2^ENSG00000135457.10 chr12:51118772:- NO_LDAS 0.0102 GT 1.8256 AG 1.8295 ["INTRACHROMOSOMAL[chr12:0.93Mb]"] CERS4--AEBP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CERS4^ENSG00000090661.12 chr19:8255634:+ AEBP1^ENSG00000106624.11 chr7:44111745:+ NO_LDAS 0.0102 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chr19--chr7]"] CERNA2--RAC2 1 0 1.00 0.00 ONLY_REF_SPLICE CERNA2^ENSG00000285972.1 chr10:84171722:- RAC2^ENSG00000128340.15 chr22:37232918:- YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr22]"] CEP83--PLXNC1 1 0 1.00 0.00 ONLY_REF_SPLICE CEP83^ENSG00000173588.15 chr12:94459557:- PLXNC1^ENSG00000136040.9 chr12:94209590:+ YES_LDAS 0.0102 GT 1.5301 AG 1.9656 ["INTRACHROMOSOMAL[chr12:0.00Mb]","NEIGHBORS_OVERLAP:-:+:[1226]"] CEP350--USP24 1 0 1.00 0.00 ONLY_REF_SPLICE CEP350^ENSG00000135837.16 chr1:180003287:+ USP24^ENSG00000162402.14 chr1:55148570:- YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTRACHROMOSOMAL[chr1:124.74Mb]"] CEP350--UBALD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEP350^ENSG00000135837.16 chr1:180065163:+ UBALD2^ENSG00000185262.9 chr17:76270367:+ YES_LDAS 0.0102 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr17]"] CEP350--AC067930.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEP350^ENSG00000135837.16 chr1:180093654:+ AC067930.3^ENSG00000254859.1 chr8:143542128:- NO_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr8]"] CEP290--TYW5 1 0 1.00 0.00 ONLY_REF_SPLICE CEP290^ENSG00000198707.17 chr12:88106675:- TYW5^ENSG00000162971.11 chr2:199936492:- YES_LDAS 0.0102 GT 1.7819 AG 1.5656 ["INTERCHROMOSOMAL[chr12--chr2]"] CEP135--USO1 1 0 1.00 0.00 ONLY_REF_SPLICE CEP135^ENSG00000174799.11 chr4:55957364:+ USO1^ENSG00000138768.15 chr4:75752373:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTRACHROMOSOMAL[chr4:19.69Mb]"] CEP128--NEDD1 1 0 1.00 0.00 ONLY_REF_SPLICE CEP128^ENSG00000100629.17 chr14:80914322:- NEDD1^ENSG00000139350.12 chr12:96934976:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTERCHROMOSOMAL[chr14--chr12]"] CEP120--MEF2C 1 0 1.00 0.00 ONLY_REF_SPLICE CEP120^ENSG00000168944.17 chr5:123372650:- MEF2C^ENSG00000081189.16 chr5:88804801:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr5:34.44Mb]"] CENPM--TBC1D15 1 0 0.50 0.00 INCL_NON_REF_SPLICE CENPM^ENSG00000100162.15 chr22:41943610:- TBC1D15^ENSG00000121749.16 chr12:71854580:+ NO_LDAS 0.0051 GT 1.9656 AG 1.5628 ["INTERCHROMOSOMAL[chr22--chr12]"] CENPM--DLG1 1 0 0.50 0.00 ONLY_REF_SPLICE CENPM^ENSG00000100162.15 chr22:41943610:- DLG1^ENSG00000075711.21 chr3:197282845:- NO_LDAS 0.0051 GT 1.9656 AG 1.5628 ["INTERCHROMOSOMAL[chr22--chr3]"] CENPM--AC083843.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CENPM^ENSG00000100162.15 chr22:41943681:- AC083843.2^ENSG00000259820.1 chr8:134794859:- NO_LDAS 0.0102 GC 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr8]"] CELF2--RCL1 1 0 1.00 0.00 ONLY_REF_SPLICE CELF2^ENSG00000048740.18 chr10:11165682:+ RCL1^ENSG00000120158.12 chr9:4823548:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr9]"] CELF1--SPI1 1 0 1.00 0.00 ONLY_REF_SPLICE CELF1^ENSG00000149187.18 chr11:47552992:- SPI1^ENSG00000066336.12 chr11:47360040:- YES_LDAS 0.0102 GT 1.8323 AG 1.9899 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[87386]"] CDKN1A--PPP1R12C 1 0 1.00 0.00 ONLY_REF_SPLICE CDKN1A^ENSG00000124762.14 chr6:36678798:+ PPP1R12C^ENSG00000125503.13 chr19:55096335:- YES_LDAS 0.0102 GT 1.7819 AG 1.7968 ["INTERCHROMOSOMAL[chr6--chr19]"] CDKN1A--LIMD2 1 0 1.00 0.00 ONLY_REF_SPLICE CDKN1A^ENSG00000124762.14 chr6:36678798:+ LIMD2^ENSG00000136490.9 chr17:63699348:- YES_LDAS 0.0102 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr17]"] CDKL1--CNOT9 1 0 1.00 0.00 ONLY_REF_SPLICE CDKL1^ENSG00000100490.10 chr14:50359028:- CNOT9^ENSG00000144580.14 chr2:218587586:+ NO_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr2]"] CDK14--RBM25 1 0 1.00 0.00 ONLY_REF_SPLICE CDK14^ENSG00000058091.17 chr7:91118208:+ RBM25^ENSG00000119707.14 chr14:73071627:+ NO_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr14]"] CDK13--VPS41 1 0 1.00 0.00 INCL_NON_REF_SPLICE CDK13^ENSG00000065883.16 chr7:40078851:+ VPS41^ENSG00000006715.16 chr7:38723234:- YES_LDAS 0.0102 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr7:1.02Mb]"] CDK12--CDK13 1 0 1.00 0.00 ONLY_REF_SPLICE CDK12^ENSG00000167258.15 chr17:39494694:+ CDK13^ENSG00000065883.16 chr7:39987599:+ NO_LDAS 0.0102 GT 1.6402 AG 1.9656 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr17--chr7]"] CDK11A--PPARG 1 0 1.00 0.00 INCL_NON_REF_SPLICE CDK11A^ENSG00000008128.23 chr1:1719358:- PPARG^ENSG00000132170.23 chr3:12406561:+ YES_LDAS 0.0102 GT 1.0530 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr3]"] CDH18--SUGP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CDH18^ENSG00000145526.12 chr5:20575745:- SUGP2^ENSG00000064607.17 chr19:19004396:- YES_LDAS 0.0102 GT 1.3996 AG 1.1589 ["INTERCHROMOSOMAL[chr5--chr19]"] CDC42SE2--IVNS1ABP 1 0 1.00 0.00 ONLY_REF_SPLICE CDC42SE2^ENSG00000158985.14 chr5:131316144:+ IVNS1ABP^ENSG00000116679.16 chr1:185305643:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr1]"] CD99L2--MTMR1 1 0 1.00 0.00 ONLY_REF_SPLICE CD99L2^ENSG00000102181.21 chrX:150814862:- MTMR1^ENSG00000063601.17 chrX:150727215:+ YES_LDAS 0.0102 GT 1.4295 AG 1.8256 ["INTRACHROMOSOMAL[chrX:0.00Mb]","LOCAL_INVERSION:-:+:[1228]"] CD9--HPS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CD9^ENSG00000010278.15 chr12:6200413:+ HPS1^ENSG00000107521.20 chr10:98434006:- NO_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr10]"] CD79A--FYTTD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CD79A^ENSG00000105369.10 chr19:41879039:+ FYTTD1^ENSG00000122068.13 chr3:197776927:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr3]"] CD53--PRCC 1 0 1.00 0.00 INCL_NON_REF_SPLICE CD53^ENSG00000143119.14 chr1:110896733:+ PRCC^ENSG00000143294.15 chr1:156767992:+ YES_LDAS 0.0102 GT 1.7056 AG 1.8295 ["INTRACHROMOSOMAL[chr1:45.85Mb]"] CD53--LRIF1 1 0 1.00 0.00 ONLY_REF_SPLICE CD53^ENSG00000143119.14 chr1:110892533:+ LRIF1^ENSG00000121931.16 chr1:110950123:- YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.05Mb]","LOCAL_INVERSION:+:-:[47268]"] CD53--BIRC2 1 0 1.00 0.00 ONLY_REF_SPLICE CD53^ENSG00000143119.14 chr1:110873248:+ BIRC2^ENSG00000110330.8 chr11:102362896:+ YES_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr11]"] CD48--RCSD1 1 0 1.00 0.00 ONLY_REF_SPLICE CD48^ENSG00000117091.10 chr1:160711682:- RCSD1^ENSG00000198771.11 chr1:167683900:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5219 ["INTRACHROMOSOMAL[chr1:6.92Mb]"] CD47--MAP3K5 1 0 1.00 0.00 INCL_NON_REF_SPLICE CD47^ENSG00000196776.17 chr3:108053577:- MAP3K5^ENSG00000197442.10 chr6:136792257:- YES_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr6]"] CD46--AP3B1 1 0 1.00 0.00 ONLY_REF_SPLICE CD46^ENSG00000117335.20 chr1:207767195:+ AP3B1^ENSG00000132842.14 chr5:78015548:- NO_LDAS 0.0102 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr5]"] CD37--DDB2 1 0 1.00 0.00 ONLY_REF_SPLICE CD37^ENSG00000104894.12 chr19:49337221:+ DDB2^ENSG00000134574.12 chr11:47237837:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr11]"] CD276--ZNF81 1 0 0.50 0.00 INCL_NON_REF_SPLICE CD276^ENSG00000103855.18 chr15:73711170:+ ZNF81^ENSG00000197779.15 chrX:47924831:+ NO_LDAS 0.0051 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr15--chrX]"] CD226--SEPTIN7 1 0 1.00 0.00 ONLY_REF_SPLICE CD226^ENSG00000150637.9 chr18:69946734:- SEPTIN7^ENSG00000122545.20 chr7:35863552:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr18--chr7]"] CD226--RTTN 1 0 1.00 0.00 ONLY_REF_SPLICE CD226^ENSG00000150637.9 chr18:69946734:- RTTN^ENSG00000176225.15 chr18:70030981:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr18:0.04Mb]","LOCAL_REARRANGEMENT:-:[41228]"] CCT6A--ACTR2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCT6A^ENSG00000146731.11 chr7:56051878:+ ACTR2^ENSG00000138071.14 chr2:65255681:+ NO_LDAS 0.0102 GC 1.6895 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr2]"] CCT5--UXS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCT5^ENSG00000150753.12 chr5:10262555:+ UXS1^ENSG00000115652.15 chr2:106125629:- NO_LDAS 0.0102 GT 1.9656 AG 1.4566 ["INTERCHROMOSOMAL[chr5--chr2]"] CCT4--GGCX 1 0 1.00 0.00 ONLY_REF_SPLICE CCT4^ENSG00000115484.15 chr2:61873002:- GGCX^ENSG00000115486.12 chr2:85553497:- YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr2:23.66Mb]"] CCNYL1--PSMB1 1 0 1.00 0.00 ONLY_REF_SPLICE CCNYL1^ENSG00000163249.13 chr2:207712116:+ PSMB1^ENSG00000008018.9 chr6:170549113:- YES_LDAS 0.0102 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr6]"] CCNY--TRAV9-2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCNY^ENSG00000108100.18 chr10:35337207:+ TRAV9-2^ENSG00000211793.2 chr14:21941387:+ NO_LDAS 0.0102 GT 1.7056 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr14]"] CCNL2--TARS2 1 0 1.00 0.00 ONLY_REF_SPLICE CCNL2^ENSG00000221978.12 chr1:1390230:- TARS2^ENSG00000143374.17 chr1:150504906:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8256 ["INTRACHROMOSOMAL[chr1:149.09Mb]"] CCNJL--OVOL2 1 0 1.00 0.00 ONLY_REF_SPLICE CCNJL^ENSG00000135083.16 chr5:160311858:- OVOL2^ENSG00000125850.11 chr20:17957037:- YES_LDAS 0.0102 GT 1.8256 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr20]"] CCNJ--TM9SF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCNJ^ENSG00000107443.16 chr10:96058294:+ TM9SF3^ENSG00000077147.16 chr10:96576829:- YES_LDAS 0.0102 GT 1.9086 AG 1.6729 ["INTRACHROMOSOMAL[chr10:0.46Mb]"] CCNI--B3GNTL1 1 0 1.00 0.00 ONLY_REF_SPLICE CCNI^ENSG00000118816.11 chr4:77055962:- B3GNTL1^ENSG00000175711.8 chr17:83048785:- NO_LDAS 0.0102 GT 1.5546 AG 1.5219 ["INTERCHROMOSOMAL[chr4--chr17]"] CCNB1IP1--ZNF649 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCNB1IP1^ENSG00000100814.18 chr14:20316223:- ZNF649^ENSG00000198093.11 chr19:51896501:- NO_LDAS 0.0102 GT 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr14--chr19]"] CCNB1--PLEKHG2 1 0 1.00 0.00 ONLY_REF_SPLICE CCNB1^ENSG00000134057.15 chr5:69175537:+ PLEKHG2^ENSG00000090924.15 chr19:39422115:+ YES_LDAS 0.0102 GT 1.5656 AG 1.8256 ["INTERCHROMOSOMAL[chr5--chr19]"] CCL3L3--CRELD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCL3L3^ENSG00000276085.1 chr17:36196614:- CRELD2^ENSG00000184164.15 chr22:49924143:+ NO_LDAS 0.0102 GT 1.9219 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr22]"] CCDC77--SENP1 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC77^ENSG00000120647.10 chr12:438554:+ SENP1^ENSG00000079387.14 chr12:48098124:- YES_LDAS 0.0102 GT 1.5058 AG 1.7819 ["INTRACHROMOSOMAL[chr12:47.60Mb]"] CCDC77--B4GALNT3 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC77^ENSG00000120647.10 chr12:438554:+ B4GALNT3^ENSG00000139044.12 chr12:535166:+ YES_LDAS 0.0102 GT 1.5058 AG 1.8295 ["ConjoinG","INTRACHROMOSOMAL[chr12:0.02Mb]","NEIGHBORS[17297]"] CCDC66--KDM4C 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC66^ENSG00000180376.17 chr3:56558910:+ KDM4C^ENSG00000107077.19 chr9:7046862:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr9]"] CCDC61--ZNF777 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC61^ENSG00000104983.8 chr19:46016393:+ ZNF777^ENSG00000196453.8 chr7:149432670:- NO_LDAS 0.0102 GT 1.7968 AG 1.5850 ["INTERCHROMOSOMAL[chr19--chr7]"] CCDC150--PGAP1 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC150^ENSG00000144395.18 chr2:196646504:+ PGAP1^ENSG00000197121.15 chr2:196902742:- YES_LDAS 0.0102 GT 1.5656 AG 1.7968 ["INTRACHROMOSOMAL[chr2:0.07Mb]","LOCAL_INVERSION:+:-:[69514]"] CCDC105--CCL4 1 0 0.50 0.00 INCL_NON_REF_SPLICE CCDC105^ENSG00000160994.4 chr19:15010733:+ CCL4^ENSG00000275302.2 chr17:36104528:+ NO_LDAS 0.0051 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr17]"] CCAR1--AGPAT3 1 0 1.00 0.00 ONLY_REF_SPLICE CCAR1^ENSG00000060339.14 chr10:68773099:+ AGPAT3^ENSG00000160216.21 chr21:43903957:+ YES_LDAS 0.0102 GT 1.4295 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr21]"] CBX5--NACA 1 0 1.00 0.00 INCL_NON_REF_SPLICE CBX5^ENSG00000094916.16 chr12:54257579:- NACA^ENSG00000196531.14 chr12:56712895:- NO_LDAS 0.0102 GT 1.5656 AG 1.5656 ["INTRACHROMOSOMAL[chr12:2.43Mb]"] CBLN2--AAK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CBLN2^ENSG00000141668.10 chr18:72538347:- AAK1^ENSG00000115977.21 chr2:69514644:- NO_LDAS 0.0102 GT 1.9086 AG 1.5656 ["INTERCHROMOSOMAL[chr18--chr2]"] CBLL1--RNF17 1 0 1.00 0.00 INCL_NON_REF_SPLICE CBLL1^ENSG00000105879.12 chr7:107758471:+ RNF17^ENSG00000132972.19 chr13:24793182:+ NO_LDAS 0.0102 AT 1.7819 AC 1.7465 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr7--chr13]"] CBLB--FAM76B 1 0 1.00 0.00 ONLY_REF_SPLICE CBLB^ENSG00000114423.23 chr3:105734009:- FAM76B^ENSG00000077458.13 chr11:95783264:- YES_LDAS 0.0102 GT 1.9656 AG 1.5850 ["INTERCHROMOSOMAL[chr3--chr11]"] CBLB--AL669831.4 1 0 1.00 0.00 ONLY_REF_SPLICE CBLB^ENSG00000114423.23 chr3:105776396:- AL669831.4^ENSG00000230092.7 chr1:810170:- NO_LDAS 0.0102 GT 1.8062 AG 1.7056 ["INTERCHROMOSOMAL[chr3--chr1]"] CBFB--TIMM17A 1 0 1.00 0.00 ONLY_REF_SPLICE CBFB^ENSG00000067955.15 chr16:67066798:+ TIMM17A^ENSG00000134375.11 chr1:201969469:+ NO_LDAS 0.0102 GT 1.5301 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr1]"] CBFB--SMARCC1 1 0 1.00 0.00 ONLY_REF_SPLICE CBFB^ENSG00000067955.15 chr16:67029813:+ SMARCC1^ENSG00000173473.11 chr3:47714490:- YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr3]"] CBFA2T2--BANP 1 0 1.00 0.00 INCL_NON_REF_SPLICE CBFA2T2^ENSG00000078699.22 chr20:33550764:+ BANP^ENSG00000172530.20 chr16:87981057:+ NO_LDAS 0.0102 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr20--chr16]"] CASP7--SPRR2A 1 0 0.50 0.00 INCL_NON_REF_SPLICE CASP7^ENSG00000165806.21 chr10:113709446:+ SPRR2A^ENSG00000241794.2 chr1:153056272:- NO_LDAS 0.0051 GT 1.8323 AG 1.8323 ["INTERCHROMOSOMAL[chr10--chr1]"] CASP3--RBSN 1 0 1.00 0.00 ONLY_REF_SPLICE CASP3^ENSG00000164305.19 chr4:184631037:- RBSN^ENSG00000131381.12 chr3:15090539:- YES_LDAS 0.0102 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr3]"] CASP10--CFLAR 1 0 1.00 0.00 ONLY_REF_SPLICE CASP10^ENSG00000003400.15 chr2:201183308:+ CFLAR^ENSG00000003402.20 chr2:201149003:+ YES_LDAS 0.0102 GT 1.9329 AG 1.6402 ["DEEPEST2019","TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr2:0.01Mb]","LOCAL_REARRANGEMENT:+:[6211]"] CASK--GPR89A 1 0 0.50 0.00 ONLY_REF_SPLICE CASK^ENSG00000147044.23 chrX:41922930:- GPR89A^ENSG00000117262.19 chr1:145663329:+ YES_LDAS 0.0051 GT 1.8323 AG 1.8256 ["INTERCHROMOSOMAL[chrX--chr1]"] CARS2--NABP2 1 0 1.00 0.00 ONLY_REF_SPLICE CARS2^ENSG00000134905.17 chr13:110647101:- NABP2^ENSG00000139579.13 chr12:56224834:+ NO_LDAS 0.0102 GT 1.6729 AG 1.6729 ["INTERCHROMOSOMAL[chr13--chr12]"] CARMIL2--UBE2M 1 0 1.00 0.00 ONLY_REF_SPLICE CARMIL2^ENSG00000159753.14 chr16:67648129:+ UBE2M^ENSG00000130725.8 chr19:58558354:- YES_LDAS 0.0102 GT 1.9219 AG 1.2867 ["INTERCHROMOSOMAL[chr16--chr19]"] CARF--TRIP12 1 0 1.00 0.00 ONLY_REF_SPLICE CARF^ENSG00000138380.18 chr2:202961426:+ TRIP12^ENSG00000153827.14 chr2:229880128:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr2:26.78Mb]"] CARD19--DDX6 1 0 1.00 0.00 ONLY_REF_SPLICE CARD19^ENSG00000165233.18 chr9:93107827:+ DDX6^ENSG00000110367.13 chr11:118781184:- NO_LDAS 0.0102 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr11]"] CAPNS1--FBL 1 0 1.00 0.00 INCL_NON_REF_SPLICE CAPNS1^ENSG00000126247.11 chr19:36141156:+ FBL^ENSG00000105202.9 chr19:39840515:- YES_LDAS 0.0102 GT 1.1589 AG 1.9086 ["INTRACHROMOSOMAL[chr19:3.68Mb]"] CAPN2--FRS3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CAPN2^ENSG00000162909.18 chr1:223749083:+ FRS3^ENSG00000137218.10 chr6:41778112:- NO_LDAS 0.0102 GT 1.9899 AG 1.5656 ["INTERCHROMOSOMAL[chr1--chr6]"] CAMLG--ZC3H13 1 0 1.00 0.00 ONLY_REF_SPLICE CAMLG^ENSG00000164615.6 chr5:134741523:+ ZC3H13^ENSG00000123200.17 chr13:46010505:- YES_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr5--chr13]"] CAMK4--SKP1 1 0 1.00 0.00 ONLY_REF_SPLICE CAMK4^ENSG00000152495.11 chr5:111224644:+ SKP1^ENSG00000113558.19 chr5:134174022:- YES_LDAS 0.0102 GT 1.7232 AG 1.9086 ["INTRACHROMOSOMAL[chr5:22.65Mb]"] CAD--ATRAID 1 0 1.00 0.00 ONLY_REF_SPLICE CAD^ENSG00000084774.14 chr2:27218016:+ ATRAID^ENSG00000138085.17 chr2:27215321:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr2:0.00Mb]","LOCAL_REARRANGEMENT:+:[191]"] CACYBP--CWC15 1 0 0.50 0.00 INCL_NON_REF_SPLICE CACYBP^ENSG00000116161.18 chr1:175010148:+ CWC15^ENSG00000150316.12 chr11:94972193:- YES_LDAS 0.0051 GT 1.5656 AG 1.6049 ["INTERCHROMOSOMAL[chr1--chr11]"] CACTIN--NFIC 1 0 1.00 0.00 ONLY_REF_SPLICE CACTIN^ENSG00000105298.14 chr19:3623688:- NFIC^ENSG00000141905.19 chr19:3449014:+ YES_LDAS 0.0102 GT 1.9086 AG 1.7465 ["INTRACHROMOSOMAL[chr19:0.14Mb]"] CACNB2--VRK2 1 0 1.00 0.00 ONLY_REF_SPLICE CACNB2^ENSG00000165995.22 chr10:18402043:+ VRK2^ENSG00000028116.18 chr2:58048827:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr2]"] CACNA1E--TOR1AIP2 1 0 1.00 0.00 ONLY_REF_SPLICE CACNA1E^ENSG00000198216.12 chr1:181580776:+ TOR1AIP2^ENSG00000169905.13 chr1:179852811:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr1:1.44Mb]"] CABLES2--DNAJC21 1 0 1.00 0.00 INCL_NON_REF_SPLICE CABLES2^ENSG00000149679.11 chr20:62396521:- DNAJC21^ENSG00000168724.17 chr5:34929727:+ NO_LDAS 0.0102 GT 1.8062 AG 1.6895 ["INTERCHROMOSOMAL[chr20--chr5]"] CABLES1--PTP4A2 1 0 1.00 0.00 ONLY_REF_SPLICE CABLES1^ENSG00000134508.12 chr18:23136607:+ PTP4A2^ENSG00000184007.22 chr1:31919658:- YES_LDAS 0.0102 GT 1.8323 AG 1.6402 ["INTERCHROMOSOMAL[chr18--chr1]"] CA13--CA3 1 0 1.00 0.00 ONLY_REF_SPLICE CA13^ENSG00000185015.8 chr8:85268627:+ CA3^ENSG00000164879.7 chr8:85439712:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["DGD_PARALOGS","ConjoinG","GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr8:0.09Mb]","NEIGHBORS[89363]"] C8orf89--MANBA 1 0 1.00 0.00 ONLY_REF_SPLICE C8orf89^ENSG00000274443.4 chr8:73256973:- MANBA^ENSG00000109323.11 chr4:102753995:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr4]"] C7orf31--UNK 1 0 1.00 0.00 INCL_NON_REF_SPLICE C7orf31^ENSG00000153790.12 chr7:25179123:- UNK^ENSG00000132478.10 chr17:75822526:+ YES_LDAS 0.0102 GT 1.6402 AG 1.6729 ["INTERCHROMOSOMAL[chr7--chr17]"] C6orf136--SRI 1 0 1.00 0.00 ONLY_REF_SPLICE C6orf136^ENSG00000204564.12 chr6:30647303:+ SRI^ENSG00000075142.14 chr7:88218942:- YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr7]"] C5orf24--DKC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE C5orf24^ENSG00000181904.9 chr5:134856372:+ DKC1^ENSG00000130826.18 chrX:154768210:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr5--chrX]"] C22orf39--UFD1 1 0 1.00 0.00 ONLY_REF_SPLICE C22orf39^ENSG00000242259.9 chr22:19447378:- UFD1^ENSG00000070010.19 chr22:19450744:- NO_LDAS 0.0102 GT 1.5656 AG 1.7968 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr22:0.00Mb]","LOCAL_REARRANGEMENT:-:[2200]"] C22orf39--DDX42 1 0 1.00 0.00 ONLY_REF_SPLICE C22orf39^ENSG00000242259.9 chr22:19447378:- DDX42^ENSG00000198231.13 chr17:63787034:+ YES_LDAS 0.0102 GT 1.5656 AG 1.9899 ["INTERCHROMOSOMAL[chr22--chr17]"] C21orf91--NMRAL1 1 0 1.00 0.00 ONLY_REF_SPLICE C21orf91^ENSG00000154642.11 chr21:17818192:- NMRAL1^ENSG00000153406.14 chr16:4469465:- YES_LDAS 0.0102 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr21--chr16]"] C1orf43--ASH1L 1 0 1.00 0.00 ONLY_REF_SPLICE C1orf43^ENSG00000143612.21 chr1:154219836:- ASH1L^ENSG00000116539.14 chr1:155459898:- NO_LDAS 0.0102 GT 1.6895 AG 1.7232 ["INTRACHROMOSOMAL[chr1:1.11Mb]"] C1D--SHPRH 1 0 1.00 0.00 INCL_NON_REF_SPLICE C1D^ENSG00000197223.12 chr2:68053061:- SHPRH^ENSG00000146414.16 chr6:145894972:- YES_LDAS 0.0102 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr6]"] C17orf49--AC092384.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE C17orf49^ENSG00000258315.5 chr17:7015133:+ AC092384.2^ENSG00000259881.1 chr16:88883587:+ NO_LDAS 0.0102 GT 1.9219 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr16]"] C16orf72--LMBR1 1 0 1.00 0.00 ONLY_REF_SPLICE C16orf72^ENSG00000182831.12 chr16:9103259:+ LMBR1^ENSG00000105983.22 chr7:156724178:- YES_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr7]"] C12orf76--CUX1 1 0 1.00 0.00 ONLY_REF_SPLICE C12orf76^ENSG00000174456.15 chr12:110048363:- CUX1^ENSG00000257923.12 chr7:102273366:+ YES_LDAS 0.0102 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chr12--chr7]"] C12orf76--ARPC3 1 0 1.00 0.00 ONLY_REF_SPLICE C12orf76^ENSG00000174456.15 chr12:110048363:- ARPC3^ENSG00000111229.16 chr12:110440388:- YES_LDAS 0.0102 GT 1.7465 AG 1.6049 ["INTRACHROMOSOMAL[chr12:0.36Mb]"] C12orf75--WASHC4 1 0 1.00 0.00 ONLY_REF_SPLICE C12orf75^ENSG00000235162.9 chr12:105348626:+ WASHC4^ENSG00000136051.15 chr12:105114216:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr12:0.07Mb]","LOCAL_REARRANGEMENT:+:[66160]"] BZW1--SLC5A12 1 0 1.00 0.00 INCL_NON_REF_SPLICE BZW1^ENSG00000082153.18 chr2:200813281:+ SLC5A12^ENSG00000148942.15 chr11:26669558:- NO_LDAS 0.0102 GT 1.3753 AG 1.2310 ["INTERCHROMOSOMAL[chr2--chr11]"] BX571818.1--UVSSA 1 0 1.00 0.00 ONLY_REF_SPLICE BX571818.1^ENSG00000285417.1 chr1:206052001:+ UVSSA^ENSG00000163945.19 chr4:1348090:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr4]"] BX322639.1--ZNF627 1 0 1.00 0.00 ONLY_REF_SPLICE BX322639.1^ENSG00000215146.5 chr10:42367816:- ZNF627^ENSG00000198551.10 chr19:11614527:+ NO_LDAS 0.0102 GT 1.5628 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr19]"] BUD13--AL390719.1 1 0 1.00 0.00 ONLY_REF_SPLICE BUD13^ENSG00000137656.12 chr11:116757146:- AL390719.1^ENSG00000217801.10 chr1:1060280:+ NO_LDAS 0.0102 GT 1.6402 AG 1.9899 ["INTERCHROMOSOMAL[chr11--chr1]"] BUB3--SCLT1 1 0 1.00 0.00 ONLY_REF_SPLICE BUB3^ENSG00000154473.18 chr10:123162828:+ SCLT1^ENSG00000151466.12 chr4:128943188:- YES_LDAS 0.0102 GT 1.1589 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr4]"] BUB3--GPR174 1 0 1.00 0.00 INCL_NON_REF_SPLICE BUB3^ENSG00000154473.18 chr10:123155112:+ GPR174^ENSG00000147138.3 chrX:79171940:+ NO_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chrX]"] BRWD1--PHIP 1 0 1.00 0.00 ONLY_REF_SPLICE BRWD1^ENSG00000185658.14 chr21:39278743:- PHIP^ENSG00000146247.14 chr6:79017583:- YES_LDAS 0.0102 GT 1.5546 AG 1.7056 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr21--chr6]"] BRWD1--NAA35 1 0 1.00 0.00 ONLY_REF_SPLICE BRWD1^ENSG00000185658.14 chr21:39298432:- NAA35^ENSG00000135040.16 chr9:85978267:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9899 ["INTERCHROMOSOMAL[chr21--chr9]"] BRPF1--ATRIP 1 0 1.00 0.00 ONLY_REF_SPLICE BRPF1^ENSG00000156983.16 chr3:9734739:+ ATRIP^ENSG00000164053.21 chr3:48450037:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9899 ["INTRACHROMOSOMAL[chr3:38.70Mb]"] BRIP1--PARP15 1 0 1.00 0.00 ONLY_REF_SPLICE BRIP1^ENSG00000136492.9 chr17:61780840:- PARP15^ENSG00000173200.13 chr3:122635020:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr3]"] BRI3BP--UBC 1 0 1.00 0.00 ONLY_REF_SPLICE BRI3BP^ENSG00000184992.13 chr12:124994003:+ UBC^ENSG00000150991.15 chr12:124913774:- YES_LDAS 0.0102 GT 1.7819 AG 1.9329 ["ChimerSeq","INTRACHROMOSOMAL[chr12:0.08Mb]","LOCAL_INVERSION:+:-:[76277]"] BRI3--SMC4 1 0 1.00 0.00 ONLY_REF_SPLICE BRI3^ENSG00000164713.10 chr7:98282453:+ SMC4^ENSG00000113810.16 chr3:160428753:+ YES_LDAS 0.0102 GT 1.8256 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr3]"] BRD9--RPAP1 1 0 1.00 0.00 ONLY_REF_SPLICE BRD9^ENSG00000028310.18 chr5:883938:- RPAP1^ENSG00000103932.12 chr15:41524254:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr15]"] BRD7--RAD17 1 0 1.00 0.00 ONLY_REF_SPLICE BRD7^ENSG00000166164.16 chr16:50333574:- RAD17^ENSG00000152942.19 chr5:69371035:+ YES_LDAS 0.0102 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr5]"] BRD7--KIFC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BRD7^ENSG00000166164.16 chr16:50314888:- KIFC1^ENSG00000237649.8 chr6:33404854:+ NO_LDAS 0.0102 GT 1.7465 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr6]"] BOLA2--AC020765.5 1 0 0.50 0.00 INCL_NON_REF_SPLICE BOLA2^ENSG00000183336.8 chr16:29454812:- AC020765.5^ENSG00000285020.1 chr16:28614761:- NO_LDAS 0.0051 GT 1.5628 AG 1.9086 ["INTRACHROMOSOMAL[chr16:0.84Mb]"] BMS1P7--AGAP14P 1 0 0.50 0.00 INCL_NON_REF_SPLICE BMS1P7^ENSG00000270025.2 chr10:48050282:- AGAP14P^ENSG00000279058.2 chr10:46337259:+ YES_LDAS 0.0051 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr10:1.69Mb]"] BMS1P2--PTPN20 1 0 0.50 0.00 ONLY_REF_SPLICE BMS1P2^ENSG00000251079.6 chr10:47544389:- PTPN20^ENSG00000204179.10 chr10:46984230:+ YES_LDAS 0.0051 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr10:0.54Mb]"] BMS1P1--MAP2K4 1 0 0.50 0.00 ONLY_REF_SPLICE BMS1P1^ENSG00000204177.10 chr10:46798168:+ MAP2K4^ENSG00000065559.15 chr17:12032266:+ YES_LDAS 0.0051 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr17]"] BMPR2--NOP58 1 0 1.00 0.00 ONLY_REF_SPLICE BMPR2^ENSG00000204217.15 chr2:202467689:+ NOP58^ENSG00000055044.11 chr2:202275113:+ YES_LDAS 0.0102 GT 1.2867 AG 1.8062 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr2:0.07Mb]","LOCAL_REARRANGEMENT:+:[72666]"] BMPR1A--USP10 1 0 0.33 0.00 INCL_NON_REF_SPLICE BMPR1A^ENSG00000107779.14 chr10:86917326:+ USP10^ENSG00000103194.16 chr16:84759309:+ YES_LDAS 0.0034 GT 1.7968 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr16]"] BMP8B--CREBL2 1 0 1.00 0.00 ONLY_REF_SPLICE BMP8B^ENSG00000116985.12 chr1:39788152:- CREBL2^ENSG00000111269.3 chr12:12635777:+ NO_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr12]"] BMP2K--MRPL1 1 0 1.00 0.00 ONLY_REF_SPLICE BMP2K^ENSG00000138756.19 chr4:78776721:+ MRPL1^ENSG00000169288.18 chr4:77871744:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr4:0.82Mb]"] BMI1--OVCH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE BMI1^ENSG00000168283.14 chr10:22329324:+ OVCH2^ENSG00000183378.12 chr11:7695112:- NO_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr11]"] BLNK--TASP1 1 0 1.00 0.00 ONLY_REF_SPLICE BLNK^ENSG00000095585.17 chr10:96271352:- TASP1^ENSG00000089123.16 chr20:13483337:- NO_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr20]"] BLNK--LDLRAD4 1 0 1.00 0.00 ONLY_REF_SPLICE BLNK^ENSG00000095585.17 chr10:96271352:- LDLRAD4^ENSG00000168675.19 chr18:13645127:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9219 ["INTERCHROMOSOMAL[chr10--chr18]"] BIN2--CDKN2B-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE BIN2^ENSG00000110934.13 chr12:51313823:- CDKN2B-AS1^ENSG00000240498.9 chr9:22056252:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr9]"] BICDL1--PDLIM5 1 0 1.00 0.00 ONLY_REF_SPLICE BICDL1^ENSG00000135127.11 chr12:119998736:+ PDLIM5^ENSG00000163110.15 chr4:94523724:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr4]"] BICD1--SOGA1 1 0 1.00 0.00 ONLY_REF_SPLICE BICD1^ENSG00000151746.15 chr12:32306122:+ SOGA1^ENSG00000149639.15 chr20:36839441:- YES_LDAS 0.0102 GT 1.9899 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr20]"] BICD1--OS9 1 0 1.00 0.00 ONLY_REF_SPLICE BICD1^ENSG00000151746.15 chr12:32107544:+ OS9^ENSG00000135506.16 chr12:57715760:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9329 ["DEEPEST2019","INTRACHROMOSOMAL[chr12:25.31Mb]"] BICC1--UBE2D1 1 0 1.00 0.00 ONLY_REF_SPLICE BICC1^ENSG00000122870.12 chr10:58620901:+ UBE2D1^ENSG00000072401.15 chr10:58361338:+ YES_LDAS 0.0102 GT 1.8323 AG 1.8256 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr10:0.14Mb]"] BET1L--RARA 1 0 1.00 0.00 ONLY_REF_SPLICE BET1L^ENSG00000177951.17 chr11:205611:- RARA^ENSG00000131759.18 chr17:40352331:+ YES_LDAS 0.0102 GT 1.9656 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr17]"] BET1L--PSPC1 1 0 1.00 0.00 ONLY_REF_SPLICE BET1L^ENSG00000177951.17 chr11:205611:- PSPC1^ENSG00000121390.19 chr13:19677823:- NO_LDAS 0.0102 GT 1.9656 AG 1.3383 ["INTERCHROMOSOMAL[chr11--chr13]"] BEST2--SP100 1 0 1.00 0.00 ONLY_REF_SPLICE BEST2^ENSG00000039987.7 chr19:12751839:+ SP100^ENSG00000067066.17 chr2:230539267:+ YES_LDAS 0.0102 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr19--chr2]"] BEND4--ATP9B 1 0 1.00 0.00 ONLY_REF_SPLICE BEND4^ENSG00000188848.16 chr4:42143428:- ATP9B^ENSG00000166377.20 chr18:79176813:+ YES_LDAS 0.0102 GT 1.9329 AG 1.5546 ["INTERCHROMOSOMAL[chr4--chr18]"] BEGAIN--BTG2 1 0 1.00 0.00 INCL_NON_REF_SPLICE BEGAIN^ENSG00000183092.16 chr14:100548172:- BTG2^ENSG00000159388.6 chr1:203307104:+ NO_LDAS 0.0102 GT 1.5656 AG 1.5628 ["INTERCHROMOSOMAL[chr14--chr1]"] BECN1--CFAP70 1 0 1.00 0.00 INCL_NON_REF_SPLICE BECN1^ENSG00000126581.13 chr17:42823748:- CFAP70^ENSG00000156042.18 chr10:73345210:- NO_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr10]"] BCOR--AGL 1 0 1.00 0.00 INCL_NON_REF_SPLICE BCOR^ENSG00000183337.18 chrX:40073708:- AGL^ENSG00000162688.17 chr1:99850195:+ YES_LDAS 0.0102 AT 1.8295 AC 1.7056 ["INTERCHROMOSOMAL[chrX--chr1]"] BCL7B--CTD-2194D22.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE BCL7B^ENSG00000106635.8 chr7:73557487:- CTD-2194D22.4^ENSG00000249326.1 chr5:1899910:+ NO_LDAS 0.0102 GT 1.7056 AG 1.5329 ["INTERCHROMOSOMAL[chr7--chr5]"] BCL2L13--SLC44A5 1 0 0.50 0.00 INCL_NON_REF_SPLICE BCL2L13^ENSG00000099968.18 chr22:17727415:+ SLC44A5^ENSG00000137968.16 chr1:75203729:- NO_LDAS 0.0051 GT 1.6402 AG 1.7968 ["INTERCHROMOSOMAL[chr22--chr1]"] BCL2L13--NEDD1 1 0 1.00 0.00 ONLY_REF_SPLICE BCL2L13^ENSG00000099968.18 chr22:17638886:+ NEDD1^ENSG00000139350.12 chr12:96909752:+ YES_LDAS 0.0102 GT 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr12]"] BCKDHB--KCNRG 1 0 1.00 0.00 ONLY_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ KCNRG^ENSG00000198553.9 chr13:50020214:+ YES_LDAS 0.0102 GT 1.9899 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr13]"] BBX--SUMO3 1 0 1.00 0.00 INCL_NON_REF_SPLICE BBX^ENSG00000114439.19 chr3:107789863:+ SUMO3^ENSG00000184900.16 chr21:44814104:- NO_LDAS 0.0102 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr3--chr21]"] BAZ2A--PTGES3 1 0 1.00 0.00 ONLY_REF_SPLICE BAZ2A^ENSG00000076108.12 chr12:56609736:- PTGES3^ENSG00000110958.16 chr12:56670364:- YES_LDAS 0.0102 GT 1.8256 AG 1.8295 ["ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr12:0.03Mb]","LOCAL_REARRANGEMENT:-:[26525]"] BAZ1A--SUPT16H 1 0 0.50 0.00 INCL_NON_REF_SPLICE BAZ1A^ENSG00000198604.11 chr14:34794745:- SUPT16H^ENSG00000092201.10 chr14:21361100:- NO_LDAS 0.0051 GT 1.8892 AG 1.5329 ["INTRACHROMOSOMAL[chr14:13.37Mb]"] BATF--PVT1 1 0 1.00 0.00 ONLY_REF_SPLICE BATF^ENSG00000156127.8 chr14:75525188:+ PVT1^ENSG00000249859.12 chr8:128070160:+ YES_LDAS 0.0102 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr8]"] BATF--DTYMK 1 0 1.00 0.00 ONLY_REF_SPLICE BATF^ENSG00000156127.8 chr14:75525188:+ DTYMK^ENSG00000168393.13 chr2:241682333:- NO_LDAS 0.0102 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr2]"] BARD1--ABO 1 0 1.00 0.00 INCL_NON_REF_SPLICE BARD1^ENSG00000138376.11 chr2:214728538:- ABO^ENSG00000175164.16 chr9:133261353:- NO_LDAS 0.0102 GT 0.0000 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr9]"] BANP--SNX29P2 1 0 1.00 0.00 ONLY_REF_SPLICE BANP^ENSG00000172530.20 chr16:88035394:+ SNX29P2^ENSG00000271699.5 chr16:29355787:+ YES_LDAS 0.0102 GT 1.5656 AG 1.8256 ["INTRACHROMOSOMAL[chr16:58.58Mb]"] BAD--PIK3R3 1 0 1.00 0.00 ONLY_REF_SPLICE BAD^ENSG00000002330.14 chr11:64284182:- PIK3R3^ENSG00000117461.15 chr1:46077613:- YES_LDAS 0.0102 GT 1.9329 AG 1.4295 ["INTERCHROMOSOMAL[chr11--chr1]"] BACH1--ATG5 1 0 1.00 0.00 ONLY_REF_SPLICE BACH1^ENSG00000156273.16 chr21:29329693:+ ATG5^ENSG00000057663.16 chr6:106186676:- YES_LDAS 0.0102 GT 1.7819 AG 1.2310 ["INTERCHROMOSOMAL[chr21--chr6]"] BABAM2--TBCE 1 0 1.00 0.00 ONLY_REF_SPLICE BABAM2^ENSG00000158019.21 chr2:27894684:+ TBCE^ENSG00000284770.2 chr1:235380019:+ YES_LDAS 0.0102 GT 1.9086 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr1]"] B4GALT6--CUL4B 1 0 1.00 0.00 ONLY_REF_SPLICE B4GALT6^ENSG00000118276.11 chr18:31657976:- CUL4B^ENSG00000158290.19 chrX:120560625:- NO_LDAS 0.0102 GT 1.9656 AG 1.5628 ["INTERCHROMOSOMAL[chr18--chrX]"] B4GALT1--RPS17 1 0 1.00 0.00 INCL_NON_REF_SPLICE B4GALT1^ENSG00000086062.13 chr9:33167005:- RPS17^ENSG00000182774.13 chr15:82540132:- YES_LDAS 0.0102 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr15]"] B3GNTL1--FGD5-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE B3GNTL1^ENSG00000175711.8 chr17:82956695:- FGD5-AS1^ENSG00000225733.6 chr3:14946154:- YES_LDAS 0.0102 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr17--chr3]"] B3GAT3--MAP7 1 0 1.00 0.00 INCL_NON_REF_SPLICE B3GAT3^ENSG00000149541.10 chr11:62615707:- MAP7^ENSG00000135525.18 chr6:136361076:- NO_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr6]"] AZIN1--AC012020.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AZIN1^ENSG00000155096.14 chr8:102833056:- AC012020.1^ENSG00000279277.2 chr3:108038744:- NO_LDAS 0.0102 GT 1.9656 AG 1.5301 ["INTERCHROMOSOMAL[chr8--chr3]"] AVIL--CTDSP2 1 0 1.00 0.00 ONLY_REF_SPLICE AVIL^ENSG00000135407.10 chr12:57808194:- CTDSP2^ENSG00000175215.11 chr12:57829596:- YES_LDAS 0.0102 GT 1.6895 AG 1.9329 ["INTRACHROMOSOMAL[chr12:0.00Mb]","LOCAL_REARRANGEMENT:-:[1223]"] ATXN10--THADA 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATXN10^ENSG00000130638.17 chr22:45844807:+ THADA^ENSG00000115970.19 chr2:43430294:- YES_LDAS 0.0102 GT 1.5546 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr2]"] ATXN10--PTPN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATXN10^ENSG00000130638.17 chr22:45811793:+ PTPN1^ENSG00000196396.10 chr20:50561363:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9219 ["INTERCHROMOSOMAL[chr22--chr20]"] ATRN--RBM28 1 0 1.00 0.00 ONLY_REF_SPLICE ATRN^ENSG00000088812.18 chr20:3560905:+ RBM28^ENSG00000106344.8 chr7:128324694:- YES_LDAS 0.0102 GT 1.5850 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr7]"] ATPAF1--EFCAB14 1 0 1.00 0.00 ONLY_REF_SPLICE ATPAF1^ENSG00000123472.12 chr1:46665256:- EFCAB14^ENSG00000159658.15 chr1:46691937:- YES_LDAS 0.0102 GT 1.7819 AG 1.9219 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:-:[792]"] ATPAF1--EFCAB14 1 0 1.00 0.00 ONLY_REF_SPLICE ATPAF1^ENSG00000123472.12 chr1:46652581:- EFCAB14^ENSG00000159658.15 chr1:46691937:- YES_LDAS 0.0102 GT 1.8892 AG 1.9219 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:-:[792]"] ATPAF1--EFCAB14 1 0 1.00 0.00 ONLY_REF_SPLICE ATPAF1^ENSG00000123472.12 chr1:46652581:- EFCAB14^ENSG00000159658.15 chr1:46678636:- YES_LDAS 0.0102 GT 1.8892 AG 1.7968 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:-:[792]"] ATP6V0E2--EPDR1 1 0 1.00 0.00 ONLY_REF_SPLICE ATP6V0E2^ENSG00000171130.18 chr7:149875645:+ EPDR1^ENSG00000086289.12 chr7:37948840:+ YES_LDAS 0.0102 GT 1.6895 AG 1.2729 ["INTRACHROMOSOMAL[chr7:111.92Mb]"] ATP6V0A1--YEATS2 1 0 1.00 0.00 ONLY_REF_SPLICE ATP6V0A1^ENSG00000033627.17 chr17:42514460:+ YEATS2^ENSG00000163872.16 chr3:183803987:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr3]"] ATP6AP2--GTF2IP23 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATP6AP2^ENSG00000182220.15 chrX:40589116:+ GTF2IP23^ENSG00000230295.1 chr7:66882893:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr7]"] ATP5MC1--RAI1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATP5MC1^ENSG00000159199.14 chr17:48895084:+ RAI1^ENSG00000108557.19 chr17:17795352:+ NO_LDAS 0.0102 GT 1.2419 AG 1.8892 ["INTRACHROMOSOMAL[chr17:31.08Mb]"] ATP5F1E--PLCG1 1 0 1.00 0.00 ONLY_REF_SPLICE ATP5F1E^ENSG00000124172.10 chr20:59030303:- PLCG1^ENSG00000124181.14 chr20:41188433:+ NO_LDAS 0.0102 GT 1.6729 AG 1.9656 ["INTRACHROMOSOMAL[chr20:17.83Mb]"] ATP2A2--ATP2A3 1 0 1.00 0.00 ONLY_REF_SPLICE ATP2A2^ENSG00000174437.17 chr12:110326475:+ ATP2A3^ENSG00000074370.18 chr17:3947855:- NO_LDAS 0.0102 GT 1.8295 AG 1.8323 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr12--chr17]"] ATP13A1--YLPM1 1 0 1.00 0.00 ONLY_REF_SPLICE ATP13A1^ENSG00000105726.17 chr19:19656660:- YLPM1^ENSG00000119596.18 chr14:74824256:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr14]"] ATM--AC092580.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATM^ENSG00000149311.19 chr11:108332900:+ AC092580.1^ENSG00000229405.1 chr2:7736807:- NO_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr2]"] ATL3--SUSD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATL3^ENSG00000184743.13 chr11:63658761:- SUSD1^ENSG00000106868.17 chr9:112058546:- NO_LDAS 0.0102 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr9]"] ATIC--EIF4A3 1 0 1.00 0.00 ONLY_REF_SPLICE ATIC^ENSG00000138363.15 chr2:215312624:+ EIF4A3^ENSG00000141543.12 chr17:80141848:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr17]"] ATG4C--USP24 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATG4C^ENSG00000125703.15 chr1:62784225:+ USP24^ENSG00000162402.14 chr1:55178129:- YES_LDAS 0.0102 GT 1.8892 AG 1.5058 ["INTRACHROMOSOMAL[chr1:7.57Mb]"] ATG4C--TARBP1 1 0 1.00 0.00 ONLY_REF_SPLICE ATG4C^ENSG00000125703.15 chr1:62784225:+ TARBP1^ENSG00000059588.10 chr1:234472811:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr1:171.53Mb]"] ATG4B--ACR 1 0 0.50 0.00 INCL_NON_REF_SPLICE ATG4B^ENSG00000168397.17 chr2:241668217:+ ACR^ENSG00000100312.11 chr22:50744090:+ YES_LDAS 0.0051 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr22]"] ATG2A--RAB3D 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATG2A^ENSG00000110046.13 chr11:64911842:- RAB3D^ENSG00000105514.8 chr19:11325395:- NO_LDAS 0.0102 GT 1.7465 AG 1.5546 ["INTERCHROMOSOMAL[chr11--chr19]"] ATG16L1--PLCD4 1 0 1.00 0.00 ONLY_REF_SPLICE ATG16L1^ENSG00000085978.22 chr2:233277673:+ PLCD4^ENSG00000115556.14 chr2:218615707:+ YES_LDAS 0.0102 GT 1.5301 AG 1.8892 ["INTRACHROMOSOMAL[chr2:14.57Mb]"] ATG13--TMEM156 1 0 1.00 0.00 ONLY_REF_SPLICE ATG13^ENSG00000175224.16 chr11:46617890:+ TMEM156^ENSG00000121895.8 chr4:38993998:- YES_LDAS 0.0102 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr4]"] ATG12--HINT1 1 0 1.00 0.00 ONLY_REF_SPLICE ATG12^ENSG00000145782.13 chr5:115837628:- HINT1^ENSG00000169567.13 chr5:131162676:- YES_LDAS 0.0102 GT 1.9899 AG 1.6895 ["INTRACHROMOSOMAL[chr5:15.31Mb]"] ATF7--NFATC3 1 0 1.00 0.00 ONLY_REF_SPLICE ATF7^ENSG00000170653.19 chr12:53600953:- NFATC3^ENSG00000072736.19 chr16:68121987:+ YES_LDAS 0.0102 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr16]"] ATF6--MINDY3 1 0 1.00 0.00 ONLY_REF_SPLICE ATF6^ENSG00000118217.7 chr1:161863312:+ MINDY3^ENSG00000148481.14 chr10:15837318:- YES_LDAS 0.0102 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr10]"] ATF2--PMS1 1 0 1.00 0.00 ONLY_REF_SPLICE ATF2^ENSG00000115966.17 chr2:175130138:- PMS1^ENSG00000064933.18 chr2:189843964:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr2:14.62Mb]"] ATF2--EPC2 1 0 1.00 0.00 ONLY_REF_SPLICE ATF2^ENSG00000115966.17 chr2:175130138:- EPC2^ENSG00000135999.12 chr2:148690214:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr2:26.28Mb]"] ATAD5--SUZ12 1 0 0.50 0.00 ONLY_REF_SPLICE ATAD5^ENSG00000176208.9 chr17:30836048:+ SUZ12^ENSG00000178691.11 chr17:31940286:+ YES_LDAS 0.0051 GT 1.9656 AG 1.8323 ["INTRACHROMOSOMAL[chr17:1.04Mb]"] ATAD2B--NBAS 1 0 1.00 0.00 ONLY_REF_SPLICE ATAD2B^ENSG00000119778.15 chr2:23754179:- NBAS^ENSG00000151779.13 chr2:15511350:- YES_LDAS 0.0102 GT 1.9656 AG 1.7232 ["INTRACHROMOSOMAL[chr2:8.19Mb]"] ASXL1--RBM4 1 0 1.00 0.00 ONLY_REF_SPLICE ASXL1^ENSG00000171456.20 chr20:32369123:+ RBM4^ENSG00000173933.21 chr11:66652277:+ NO_LDAS 0.0102 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr11]"] ASXL1--MARCHF7 1 0 1.00 0.00 ONLY_REF_SPLICE ASXL1^ENSG00000171456.20 chr20:32369123:+ MARCHF7^ENSG00000136536.15 chr2:159767284:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr2]"] ASXL1--C2CD2L 1 0 1.00 0.00 INCL_NON_REF_SPLICE ASXL1^ENSG00000171456.20 chr20:32436139:+ C2CD2L^ENSG00000172375.14 chr11:119115786:+ NO_LDAS 0.0102 GC 1.7232 AG 1.6895 ["INTERCHROMOSOMAL[chr20--chr11]"] ASXL1--ASH1L 1 0 1.00 0.00 ONLY_REF_SPLICE ASXL1^ENSG00000171456.20 chr20:32369123:+ ASH1L^ENSG00000116539.14 chr1:155521618:- YES_LDAS 0.0102 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr20--chr1]"] ASPSCR1--FAM156A 1 0 0.50 0.00 ONLY_REF_SPLICE ASPSCR1^ENSG00000169696.16 chr17:81985607:+ FAM156A^ENSG00000268350.7 chrX:52956346:- YES_LDAS 0.0051 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chrX]"] ASF1B--PTPN22 1 0 1.00 0.00 ONLY_REF_SPLICE ASF1B^ENSG00000105011.9 chr19:14121532:- PTPN22^ENSG00000134242.16 chr1:113825172:- YES_LDAS 0.0102 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr1]"] ASF1B--HELLS 1 0 1.00 0.00 ONLY_REF_SPLICE ASF1B^ENSG00000105011.9 chr19:14121532:- HELLS^ENSG00000119969.15 chr10:94588229:+ YES_LDAS 0.0102 GT 1.8892 AG 1.5301 ["INTERCHROMOSOMAL[chr19--chr10]"] ASCC3--SNAP23 1 0 1.00 0.00 ONLY_REF_SPLICE ASCC3^ENSG00000112249.14 chr6:100848148:- SNAP23^ENSG00000092531.10 chr15:42513399:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr15]"] ASCC3--RO60 1 0 1.00 0.00 ONLY_REF_SPLICE ASCC3^ENSG00000112249.14 chr6:100798713:- RO60^ENSG00000116747.13 chr1:193084579:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr6--chr1]"] ARSB--IQGAP2 1 0 1.00 0.00 ONLY_REF_SPLICE ARSB^ENSG00000113273.17 chr5:78955295:- IQGAP2^ENSG00000145703.16 chr5:76693355:+ NO_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr5:2.07Mb]"] ARRDC1--INF2 1 0 1.00 0.00 ONLY_REF_SPLICE ARRDC1^ENSG00000197070.14 chr9:137605835:+ INF2^ENSG00000203485.14 chr14:104718795:+ YES_LDAS 0.0102 GT 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr14]"] ARPP19--FAM214A 1 0 1.00 0.00 ONLY_REF_SPLICE ARPP19^ENSG00000128989.11 chr15:52568848:- FAM214A^ENSG00000047346.12 chr15:52613857:- NO_LDAS 0.0102 GT 1.3996 AG 1.9086 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr15:0.01Mb]","LOCAL_REARRANGEMENT:-:[11434]"] ARPC4--AC004951.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARPC4^ENSG00000241553.13 chr3:9806301:+ AC004951.1^ENSG00000228434.1 chr7:44007549:- YES_LDAS 0.0102 GC 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr7]"] ARPC2--ASXL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARPC2^ENSG00000163466.16 chr2:218228796:+ ASXL1^ENSG00000171456.20 chr20:32360710:+ NO_LDAS 0.0102 GT 1.5546 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr20]"] ARPC1B--TLE5 1 0 1.00 0.00 ONLY_REF_SPLICE ARPC1B^ENSG00000130429.15 chr7:99391253:+ TLE5^ENSG00000104964.15 chr19:3056356:- YES_LDAS 0.0102 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr7--chr19]"] ARPC1A--GNPAT 1 0 1.00 0.00 ONLY_REF_SPLICE ARPC1A^ENSG00000241685.10 chr7:99338285:+ GNPAT^ENSG00000116906.13 chr1:231265712:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr7--chr1]"] ARNTL2--PPFIBP1 1 0 1.00 0.00 ONLY_REF_SPLICE ARNTL2^ENSG00000029153.14 chr12:27380404:+ PPFIBP1^ENSG00000110841.14 chr12:27633362:+ YES_LDAS 0.0102 GT 1.7819 AG 1.7819 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr12:0.10Mb]","NEIGHBORS[98142]"] ARNTL2--CCDC91 1 0 1.00 0.00 ONLY_REF_SPLICE ARNTL2^ENSG00000029153.14 chr12:27401363:+ CCDC91^ENSG00000123106.10 chr12:28305649:+ YES_LDAS 0.0102 GT 1.4566 AG 1.9656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr12:0.71Mb]"] ARMC7--NFYA 1 0 1.00 0.00 ONLY_REF_SPLICE ARMC7^ENSG00000125449.7 chr17:75110606:+ NFYA^ENSG00000001167.14 chr6:41079029:+ YES_LDAS 0.0102 GT 1.6895 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chr6]"] ARL6IP6--ANKRD36C 1 0 1.00 0.00 ONLY_REF_SPLICE ARL6IP6^ENSG00000177917.11 chr2:152720586:+ ANKRD36C^ENSG00000174501.14 chr2:95962547:- YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr2:56.73Mb]"] ARL11--SMARCC1 1 0 1.00 0.00 ONLY_REF_SPLICE ARL11^ENSG00000152213.4 chr13:49628615:+ SMARCC1^ENSG00000173473.11 chr3:47678311:- YES_LDAS 0.0102 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr13--chr3]"] ARID4B--PANK3 1 0 1.00 0.00 ONLY_REF_SPLICE ARID4B^ENSG00000054267.22 chr1:235326914:- PANK3^ENSG00000120137.7 chr5:168568998:- YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr5]"] ARID2--SCAF11 1 0 1.00 0.00 ONLY_REF_SPLICE ARID2^ENSG00000189079.17 chr12:45839496:+ SCAF11^ENSG00000139218.18 chr12:45961857:- YES_LDAS 0.0102 GT 1.9219 AG 1.5628 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr12:0.01Mb]","LOCAL_INVERSION:+:-:[11091]"] ARHGEF9--LINC01278 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGEF9^ENSG00000131089.17 chrX:63643980:- LINC01278^ENSG00000235437.8 chrX:63432491:- YES_LDAS 0.0102 GT 1.7968 AG 1.8892 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chrX:0.07Mb]","NEIGHBORS[73872]"] ARHGEF7--YES1 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGEF7^ENSG00000102606.18 chr13:111210002:+ YES1^ENSG00000176105.14 chr18:756835:- YES_LDAS 0.0102 GT 1.9086 AG 1.8062 ["INTERCHROMOSOMAL[chr13--chr18]"] ARHGEF7--NAXD 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGEF7^ENSG00000102606.18 chr13:111205373:+ NAXD^ENSG00000213995.12 chr13:110622216:+ YES_LDAS 0.0102 GT 1.7232 AG 1.8256 ["INTRACHROMOSOMAL[chr13:0.47Mb]"] ARHGAP6--OLA1 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP6^ENSG00000047648.23 chrX:11427548:- OLA1^ENSG00000138430.16 chr2:174142000:- YES_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chrX--chr2]"] ARHGAP31--PDIA5 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP31^ENSG00000031081.11 chr3:119393591:+ PDIA5^ENSG00000065485.20 chr3:123209199:+ YES_LDAS 0.0102 GT 1.8892 AG 1.4566 ["INTRACHROMOSOMAL[chr3:3.65Mb]"] ARHGAP31--GSK3B 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP31^ENSG00000031081.11 chr3:119295004:+ GSK3B^ENSG00000082701.17 chr3:119876508:- YES_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.40Mb]"] ARHGAP27--AL139398.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARHGAP27^ENSG00000159314.11 chr17:45404445:- AL139398.1^ENSG00000284391.1 chrX:70434781:- NO_LDAS 0.0102 GT 1.8256 AG 1.5656 ["INTERCHROMOSOMAL[chr17--chrX]"] ARHGAP26--SKP1 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP26^ENSG00000145819.18 chr5:142770915:+ SKP1^ENSG00000113558.19 chr5:134174022:- NO_LDAS 0.0102 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr5:8.59Mb]"] ARHGAP24--USP25 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP24^ENSG00000138639.18 chr4:85570721:+ USP25^ENSG00000155313.15 chr21:15874403:+ YES_LDAS 0.0102 GT 1.9086 AG 1.6402 ["INTERCHROMOSOMAL[chr4--chr21]"] ARHGAP18--MYL12A 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP18^ENSG00000146376.11 chr6:129710024:- MYL12A^ENSG00000101608.13 chr18:3253233:+ YES_LDAS 0.0102 GT 1.8256 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr18]"] ARHGAP17--PEX5L 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP17^ENSG00000140750.17 chr16:24977215:- PEX5L^ENSG00000114757.19 chr3:179898246:- YES_LDAS 0.0102 GT 1.5656 AG 1.8323 ["INTERCHROMOSOMAL[chr16--chr3]"] ARHGAP10--HECTD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARHGAP10^ENSG00000071205.12 chr4:147955374:+ HECTD2^ENSG00000165338.17 chr10:91410332:+ NO_LDAS 0.0102 GT 1.9086 AG 1.5850 ["INTERCHROMOSOMAL[chr4--chr10]"] ARFIP1--LSM6 1 0 1.00 0.00 ONLY_REF_SPLICE ARFIP1^ENSG00000164144.16 chr4:152780091:+ LSM6^ENSG00000164167.12 chr4:146182912:+ YES_LDAS 0.0102 GT 1.5058 AG 1.5656 ["INTRACHROMOSOMAL[chr4:6.58Mb]"] ARFGEF1--UGT3A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARFGEF1^ENSG00000066777.9 chr8:67287962:- UGT3A1^ENSG00000145626.12 chr5:35954941:- NO_LDAS 0.0102 GT 1.8062 AG 1.5301 ["INTERCHROMOSOMAL[chr8--chr5]"] ARFGEF1--INTS9 1 0 1.00 0.00 ONLY_REF_SPLICE ARFGEF1^ENSG00000066777.9 chr8:67200396:- INTS9^ENSG00000104299.15 chr8:28859563:- YES_LDAS 0.0102 GT 1.5301 AG 1.9086 ["INTRACHROMOSOMAL[chr8:38.28Mb]"] ARFGAP3--YWHAH 1 0 1.00 0.00 ONLY_REF_SPLICE ARFGAP3^ENSG00000242247.11 chr22:42807073:- YWHAH^ENSG00000128245.15 chr22:31956139:+ NO_LDAS 0.0102 GT 1.5656 AG 1.9086 ["INTRACHROMOSOMAL[chr22:10.84Mb]"] ARFGAP2--SASH3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARFGAP2^ENSG00000149182.15 chr11:47173083:- SASH3^ENSG00000122122.10 chrX:129793091:+ YES_LDAS 0.0102 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chrX]"] APOLD1--RBFA 1 0 1.00 0.00 ONLY_REF_SPLICE APOLD1^ENSG00000178878.13 chr12:12726096:+ RBFA^ENSG00000101546.13 chr18:80045774:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr12--chr18]"] APBB2--MAP3K7CL 1 0 1.00 0.00 ONLY_REF_SPLICE APBB2^ENSG00000163697.17 chr4:41065576:- MAP3K7CL^ENSG00000156265.16 chr21:29091501:+ YES_LDAS 0.0102 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr4--chr21]"] APBA3--FBH1 1 0 1.00 0.00 ONLY_REF_SPLICE APBA3^ENSG00000011132.12 chr19:3759561:- FBH1^ENSG00000134452.20 chr10:5903020:+ YES_LDAS 0.0102 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr10]"] APAF1--CEP135 1 0 1.00 0.00 ONLY_REF_SPLICE APAF1^ENSG00000120868.14 chr12:98715552:+ CEP135^ENSG00000174799.11 chr4:56011412:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr4]"] AP1M1--LMCD1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AP1M1^ENSG00000072958.9 chr19:16233618:+ LMCD1^ENSG00000071282.12 chr3:8569287:+ NO_LDAS 0.0051 GT 1.8295 AG 1.9899 ["INTERCHROMOSOMAL[chr19--chr3]"] AP1B1--GOT2 1 0 1.00 0.00 ONLY_REF_SPLICE AP1B1^ENSG00000100280.17 chr22:29351705:- GOT2^ENSG00000125166.13 chr16:58719255:- YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr16]"] AP1AR--SEC61A1 1 0 1.00 0.00 ONLY_REF_SPLICE AP1AR^ENSG00000138660.12 chr4:112232174:+ SEC61A1^ENSG00000058262.10 chr3:128066954:+ NO_LDAS 0.0102 GT 1.2419 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr3]"] AP002495.1--PPFIA1 1 0 1.00 0.00 ONLY_REF_SPLICE AP002495.1^ENSG00000254469.8 chr11:71928365:- PPFIA1^ENSG00000131626.19 chr11:70372215:+ YES_LDAS 0.0102 GT 1.7056 AG 1.9656 ["INTRACHROMOSOMAL[chr11:1.48Mb]"] AP002495.1--DYRK1A 1 0 1.00 0.00 ONLY_REF_SPLICE AP002495.1^ENSG00000254469.8 chr11:71916074:- DYRK1A^ENSG00000157540.22 chr21:37420299:+ YES_LDAS 0.0102 GT 1.9899 AG 1.7232 ["INTERCHROMOSOMAL[chr11--chr21]"] AP002387.1--CBX3 1 0 1.00 0.00 ONLY_REF_SPLICE AP002387.1^ENSG00000254682.1 chr11:71448885:+ CBX3^ENSG00000122565.19 chr7:26211662:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr7]"] AP002364.1--CDC42BPA 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP002364.1^ENSG00000280367.1 chr11:90223420:+ CDC42BPA^ENSG00000143776.18 chr1:227074364:- YES_LDAS 0.0102 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr1]"] AP001347.1--DEPDC7 1 0 0.50 0.00 ONLY_REF_SPLICE AP001347.1^ENSG00000224905.7 chr21:14027597:+ DEPDC7^ENSG00000121690.11 chr11:33028603:+ YES_LDAS 0.0051 GT 1.8323 AG 1.5058 ["INTERCHROMOSOMAL[chr21--chr11]"] AP001029.2--PRELID3A 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP001029.2^ENSG00000267199.1 chr18:12447619:+ PRELID3A^ENSG00000141391.14 chr18:12421540:+ YES_LDAS 0.0102 GT 1.8256 AG 1.9329 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr18:0.01Mb]","LOCAL_REARRANGEMENT:+:[6652]"] AP000785.1--YBX1 1 0 0.33 0.00 INCL_NON_REF_SPLICE AP000785.1^ENSG00000254933.1 chr11:76194840:+ YBX1^ENSG00000065978.19 chr1:42700918:+ YES_LDAS 0.0034 GT 1.7819 AG 1.2729 ["INTERCHROMOSOMAL[chr11--chr1]"] AP000424.1--TRIM24 1 0 1.00 0.00 ONLY_REF_SPLICE AP000424.1^ENSG00000253666.2 chr8:100475836:+ TRIM24^ENSG00000122779.18 chr7:138583850:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr8--chr7]"] AP000424.1--SH3YL1 1 0 1.00 0.00 ONLY_REF_SPLICE AP000424.1^ENSG00000253666.2 chr8:100475836:+ SH3YL1^ENSG00000035115.22 chr2:230044:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr2]"] ANXA5--PLRG1 1 0 1.00 0.00 ONLY_REF_SPLICE ANXA5^ENSG00000164111.15 chr4:121671547:- PLRG1^ENSG00000171566.12 chr4:154547064:- YES_LDAS 0.0102 GT 1.7465 AG 1.7465 ["INTRACHROMOSOMAL[chr4:32.84Mb]"] ANXA4--ARF1 1 0 1.00 0.00 ONLY_REF_SPLICE ANXA4^ENSG00000196975.16 chr2:69742175:+ ARF1^ENSG00000143761.16 chr1:228097078:+ YES_LDAS 0.0102 GT 1.5329 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr1]"] ANP32B--RTKN 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANP32B^ENSG00000136938.9 chr9:98011377:+ RTKN^ENSG00000114993.17 chr2:74442375:- NO_LDAS 0.0102 GT 1.7056 AG 1.2366 ["INTERCHROMOSOMAL[chr9--chr2]"] ANO9--UBQLN4P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANO9^ENSG00000185101.13 chr11:428749:- UBQLN4P1^ENSG00000241627.3 chr3:148986200:- YES_LDAS 0.0102 GT 1.7968 AG 1.5219 ["INTERCHROMOSOMAL[chr11--chr3]"] ANO8--FKBP1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANO8^ENSG00000074855.11 chr19:17330221:- FKBP1A^ENSG00000088832.18 chr20:1372240:- NO_LDAS 0.0102 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr20]"] ANO8--FCSK 1 0 1.00 0.00 ONLY_REF_SPLICE ANO8^ENSG00000074855.11 chr19:17332930:- FCSK^ENSG00000157353.17 chr16:70478272:+ NO_LDAS 0.0102 GT 1.7819 AG 1.6049 ["INTERCHROMOSOMAL[chr19--chr16]"] ANO10--A4GALT 1 0 1.00 0.00 ONLY_REF_SPLICE ANO10^ENSG00000160746.13 chr3:43621909:- A4GALT^ENSG00000128274.17 chr22:42693997:- NO_LDAS 0.0102 GT 1.3996 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr22]"] ANKRD52--POU3F3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKRD52^ENSG00000139645.11 chr12:56258334:- POU3F3^ENSG00000198914.5 chr2:104855913:+ NO_LDAS 0.0102 GT 1.5058 AG 1.4566 ["INTERCHROMOSOMAL[chr12--chr2]"] ANKRD28--POLA1 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD28^ENSG00000206560.11 chr3:15859377:- POLA1^ENSG00000101868.13 chrX:24714554:+ YES_LDAS 0.0102 GT 1.9086 AG 1.3996 ["INTERCHROMOSOMAL[chr3--chrX]"] ANKRD27--PDHA1 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD27^ENSG00000105186.16 chr19:32631402:- PDHA1^ENSG00000131828.14 chrX:19354491:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5219 ["INTERCHROMOSOMAL[chr19--chrX]"] ANKRD20A5P--POTEKP 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD20A5P^ENSG00000186481.16 chr18:14179597:+ POTEKP^ENSG00000204434.6 chr2:131596774:+ NO_LDAS 0.0102 GT 1.5656 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr2]"] ANKLE2--CHFR 1 0 1.00 0.00 ONLY_REF_SPLICE ANKLE2^ENSG00000176915.15 chr12:132761618:- CHFR^ENSG00000072609.18 chr12:132861634:- YES_LDAS 0.0102 GT 1.3753 AG 1.1589 ["ChimerSeq","INTRACHROMOSOMAL[chr12:0.06Mb]","LOCAL_REARRANGEMENT:-:[60355]"] ANKFY1--NUP88 1 0 1.00 0.00 ONLY_REF_SPLICE ANKFY1^ENSG00000185722.18 chr17:4242256:- NUP88^ENSG00000108559.12 chr17:5414134:- YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr17:1.10Mb]"] ANK2--UBE2D3P1 1 0 0.50 0.00 INCL_NON_REF_SPLICE ANK2^ENSG00000145362.20 chr4:112818264:+ UBE2D3P1^ENSG00000225022.1 chr20:5292807:- YES_LDAS 0.0051 GT 1.8295 AG 1.8062 ["INTERCHROMOSOMAL[chr4--chr20]"] ANK2--MCUB 1 0 1.00 0.00 ONLY_REF_SPLICE ANK2^ENSG00000145362.20 chr4:112904514:+ MCUB^ENSG00000005059.16 chr4:109682582:+ NO_LDAS 0.0102 GT 1.9219 AG 1.6049 ["INTRACHROMOSOMAL[chr4:3.13Mb]"] ANAPC5--PGA3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANAPC5^ENSG00000089053.13 chr12:121345850:- PGA3^ENSG00000229859.10 chr11:61208141:+ NO_LDAS 0.0102 GT 1.6729 AG 1.9219 ["INTERCHROMOSOMAL[chr12--chr11]"] ANAPC15--NCLP2 1 0 0.33 0.00 INCL_NON_REF_SPLICE ANAPC15^ENSG00000110200.8 chr11:72110088:- NCLP2^ENSG00000234228.1 chrX:135076214:- YES_LDAS 0.0034 GT 1.6895 AG 1.5628 ["INTERCHROMOSOMAL[chr11--chrX]"] ANAPC1--CD46 1 0 1.00 0.00 ONLY_REF_SPLICE ANAPC1^ENSG00000153107.13 chr2:111788234:- CD46^ENSG00000117335.20 chr1:207770321:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr1]"] AMZ1--NUP214 1 0 1.00 0.00 ONLY_REF_SPLICE AMZ1^ENSG00000174945.13 chr7:2709816:+ NUP214^ENSG00000126883.17 chr9:131187289:+ YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr9]"] AMZ1--ERCC6 1 0 1.00 0.00 INCL_NON_REF_SPLICE AMZ1^ENSG00000174945.13 chr7:2713793:+ ERCC6^ENSG00000225830.16 chr10:49532753:- YES_LDAS 0.0102 GC 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr10]"] AMZ1--CHST12 1 0 1.00 0.00 ONLY_REF_SPLICE AMZ1^ENSG00000174945.13 chr7:2709816:+ CHST12^ENSG00000136213.10 chr7:2432563:+ YES_LDAS 0.0102 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr7:0.23Mb]"] AMPD2--CPNE1 1 0 1.00 0.00 ONLY_REF_SPLICE AMPD2^ENSG00000116337.20 chr1:109620278:+ CPNE1^ENSG00000214078.13 chr20:35632923:- YES_LDAS 0.0102 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr20]"] AMMECR1L--PAPOLA 1 0 1.00 0.00 INCL_NON_REF_SPLICE AMMECR1L^ENSG00000144233.11 chr2:127874197:- PAPOLA^ENSG00000090060.18 chr14:96521006:+ NO_LDAS 0.0102 GT 1.7968 AG 1.4566 ["INTERCHROMOSOMAL[chr2--chr14]"] AMD1--CMAHP 1 0 1.00 0.00 ONLY_REF_SPLICE AMD1^ENSG00000123505.19 chr6:110875215:+ CMAHP^ENSG00000168405.17 chr6:25084576:- YES_LDAS 0.0102 GT 1.8892 AG 1.6729 ["INTRACHROMOSOMAL[chr6:85.42Mb]"] AMBRA1--NPIPB12 1 0 0.25 0.00 INCL_NON_REF_SPLICE AMBRA1^ENSG00000110497.14 chr11:46593932:- NPIPB12^ENSG00000169203.16 chr16:29495607:- YES_LDAS 0.0025 GT 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr16]"] ALYREF--HDGFL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALYREF^ENSG00000183684.8 chr17:81890745:- HDGFL2^ENSG00000167674.15 chr19:4494009:+ NO_LDAS 0.0102 GT 1.7465 AG 1.5656 ["INTERCHROMOSOMAL[chr17--chr19]"] ALS2--TBCEL 1 0 1.00 0.00 ONLY_REF_SPLICE ALS2^ENSG00000003393.16 chr2:201767229:- TBCEL^ENSG00000154114.12 chr11:121035733:+ YES_LDAS 0.0102 GT 1.9219 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr11]"] ALPK1--MED6 1 0 1.00 0.00 ONLY_REF_SPLICE ALPK1^ENSG00000073331.18 chr4:112441105:+ MED6^ENSG00000133997.12 chr14:70596702:- YES_LDAS 0.0102 GT 1.8295 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr14]"] ALMS1--SPRED2 1 0 0.50 0.00 ONLY_REF_SPLICE ALMS1^ENSG00000116127.19 chr2:73603304:+ SPRED2^ENSG00000198369.10 chr2:65344896:- NO_LDAS 0.0051 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr2:7.95Mb]"] ALKBH3--ACCSL 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALKBH3^ENSG00000166199.13 chr11:43901725:+ ACCSL^ENSG00000205126.2 chr11:44047996:+ NO_LDAS 0.0102 GT 1.4295 AG 1.9086 ["INTRACHROMOSOMAL[chr11:0.13Mb]"] ALK--EML4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALK^ENSG00000171094.18 chr2:29223426:- EML4^ENSG00000143924.19 chr2:42288245:+ YES_LDAS 0.0102 CA 1.9086 TA 1.7465 ["chimerdb_pubmed","ChimerPub","INTRACHROMOSOMAL[chr2:12.25Mb]"] ALK--EML4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALK^ENSG00000171094.18 chr2:29223355:- EML4^ENSG00000143924.19 chr2:42295489:+ YES_LDAS 0.0102 TC 1.8062 TA 1.7819 ["chimerdb_pubmed","ChimerPub","INTRACHROMOSOMAL[chr2:12.25Mb]"] ALK--EML4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALK^ENSG00000171094.18 chr2:29222521:- EML4^ENSG00000143924.19 chr2:42288250:+ YES_LDAS 0.0102 GA 1.9329 AT 1.9086 ["chimerdb_pubmed","ChimerPub","INTRACHROMOSOMAL[chr2:12.25Mb]"] ALG5--VMP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALG5^ENSG00000120697.10 chr13:36985682:- VMP1^ENSG00000062716.13 chr17:59842183:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr13--chr17]"] ALCAM--STK35 1 0 0.50 0.00 INCL_NON_REF_SPLICE ALCAM^ENSG00000170017.12 chr3:105367529:+ STK35^ENSG00000125834.13 chr20:2147753:+ NO_LDAS 0.0051 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr20]"] ALAS1--IDE 1 0 1.00 0.00 ONLY_REF_SPLICE ALAS1^ENSG00000023330.15 chr3:52204012:+ IDE^ENSG00000119912.18 chr10:92534785:- YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr10]"] AL590068.4--NUP98 1 0 1.00 0.00 ONLY_REF_SPLICE AL590068.4^ENSG00000287420.1 chr10:30529842:+ NUP98^ENSG00000110713.17 chr11:3753408:- YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr11]"] AL391058.1--AC117481.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL391058.1^ENSG00000232499.2 chr1:113449897:+ AC117481.1^ENSG00000287398.1 chr3:75214533:+ NO_LDAS 0.0102 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr3]"] AL355488.1--RBM15 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL355488.1^ENSG00000273373.1 chr1:110372346:+ RBM15^ENSG00000162775.17 chr1:110345539:+ YES_LDAS 0.0102 GT 1.6895 AG 1.6895 ["INTRACHROMOSOMAL[chr1:0.02Mb]","LOCAL_REARRANGEMENT:+:[23473]"] AL162411.1--OVOL2 1 0 1.00 0.00 ONLY_REF_SPLICE AL162411.1^ENSG00000236924.1 chr9:6646085:+ OVOL2^ENSG00000125850.11 chr20:17957037:- YES_LDAS 0.0102 GT 1.7232 AG 1.9219 ["INTERCHROMOSOMAL[chr9--chr20]"] AL162411.1--FKBP4 1 0 0.50 0.00 ONLY_REF_SPLICE AL162411.1^ENSG00000236924.1 chr9:6669728:+ FKBP4^ENSG00000004478.8 chr12:2797138:+ YES_LDAS 0.0051 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr9--chr12]"] AL161640.3--FYCO1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AL161640.3^ENSG00000287633.1 chr1:234553394:+ FYCO1^ENSG00000163820.15 chr3:45968286:- NO_LDAS 0.0051 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr3]"] AL160236.1--SRP9 1 0 0.06 0.00 INCL_NON_REF_SPLICE AL160236.1^ENSG00000258656.1 chr14:60972314:- SRP9^ENSG00000143742.14 chr1:225777935:+ NO_LDAS 0.0006 GT 0.9968 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr1]"] AL139353.1--JMJD1C 1 0 1.00 0.00 ONLY_REF_SPLICE AL139353.1^ENSG00000203546.7 chr14:31453275:- JMJD1C^ENSG00000171988.19 chr10:63217331:- YES_LDAS 0.0102 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr14--chr10]"] AL139353.1--GEMIN4 1 0 1.00 0.00 ONLY_REF_SPLICE AL139353.1^ENSG00000203546.7 chr14:31453275:- GEMIN4^ENSG00000179409.11 chr17:748032:- YES_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr17]"] AL139260.1--STIL 1 0 1.00 0.00 ONLY_REF_SPLICE AL139260.1^ENSG00000228436.3 chr1:38876018:+ STIL^ENSG00000123473.16 chr1:47299968:- YES_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr1:8.29Mb]"] AL139220.2--GPX1P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL139220.2^ENSG00000230615.7 chr1:44030549:+ GPX1P1^ENSG00000197582.5 chrX:13378902:- NO_LDAS 0.0102 GT 1.4716 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chrX]"] AL137058.1--CAMK2D 1 0 0.14 0.00 ONLY_REF_SPLICE AL137058.1^ENSG00000244471.6 chr13:52522795:+ CAMK2D^ENSG00000145349.17 chr4:113465604:- NO_LDAS 0.0014 GT 1.5850 AG 1.4566 ["INTERCHROMOSOMAL[chr13--chr4]"] AL050309.1--AC092666.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AL050309.1^ENSG00000227486.2 chrX:56019162:+ AC092666.1^ENSG00000241449.6 chr7:150037177:+ NO_LDAS 0.0051 GT 0.8366 AG 1.8062 ["INTERCHROMOSOMAL[chrX--chr7]"] AL050309.1--AC013448.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE AL050309.1^ENSG00000227486.2 chrX:56019162:+ AC013448.2^ENSG00000235610.1 chr2:223510884:+ NO_LDAS 0.0051 GT 0.8366 AG 1.8256 ["INTERCHROMOSOMAL[chrX--chr2]"] AL049766.1--ZBTB18 1 0 1.00 0.00 ONLY_REF_SPLICE AL049766.1^ENSG00000274760.1 chr20:49279208:+ ZBTB18^ENSG00000179456.10 chr1:244053788:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr20--chr1]"] AL049766.1--ADAM9 1 0 1.00 0.00 ONLY_REF_SPLICE AL049766.1^ENSG00000274760.1 chr20:49279208:+ ADAM9^ENSG00000168615.13 chr8:39007886:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr8]"] AL031733.2--ATP1B1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL031733.2^ENSG00000241666.2 chr1:167629538:- ATP1B1^ENSG00000143153.13 chr1:169124884:+ NO_LDAS 0.0102 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr1:1.48Mb]"] AL022157.1--FAAH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL022157.1^ENSG00000226310.1 chrX:57127058:+ FAAH2^ENSG00000165591.7 chrX:57292498:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chrX:0.16Mb]"] AKR1A1--RMRP 1 0 1.00 0.00 INCL_NON_REF_SPLICE AKR1A1^ENSG00000117448.14 chr1:45566613:+ RMRP^ENSG00000269900.3 chr9:35657806:- YES_LDAS 0.0102 AT 1.8892 AC 1.8295 ["INTERCHROMOSOMAL[chr1--chr9]"] AKR1A1--ELL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AKR1A1^ENSG00000117448.14 chr1:45568121:+ ELL2^ENSG00000118985.16 chr5:95961685:- YES_LDAS 0.0102 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr5]"] AKIRIN2--RNGTT 1 0 1.00 0.00 ONLY_REF_SPLICE AKIRIN2^ENSG00000135334.9 chr6:87701450:- RNGTT^ENSG00000111880.16 chr6:88891915:- YES_LDAS 0.0102 GT 1.5546 AG 1.7465 ["INTRACHROMOSOMAL[chr6:0.91Mb]"] AK6--PKP4 1 0 1.00 0.00 ONLY_REF_SPLICE AK6^ENSG00000085231.14 chr5:69369657:- PKP4^ENSG00000144283.22 chr2:158533180:+ YES_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr2]"] AK6--PIK3R1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AK6^ENSG00000085231.14 chr5:69366481:- PIK3R1^ENSG00000145675.15 chr5:68217755:+ NO_LDAS 0.0051 AT 1.8892 AC 1.8323 ["INTRACHROMOSOMAL[chr5:1.05Mb]"] AK3--MSH2 1 0 1.00 0.00 ONLY_REF_SPLICE AK3^ENSG00000147853.17 chr9:4740937:- MSH2^ENSG00000095002.15 chr2:47463031:+ YES_LDAS 0.0102 GT 1.7968 AG 1.7968 ["INTERCHROMOSOMAL[chr9--chr2]"] AK2--AKAP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE AK2^ENSG00000004455.17 chr1:33036750:- AKAP5^ENSG00000179841.8 chr14:64473438:+ YES_LDAS 0.0102 GT 1.2867 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr14]"] AIG1--FBXO5 1 0 1.00 0.00 ONLY_REF_SPLICE AIG1^ENSG00000146416.19 chr6:143165183:+ FBXO5^ENSG00000112029.10 chr6:152973136:- YES_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr6:9.63Mb]"] AGPS--SP3 1 0 1.00 0.00 ONLY_REF_SPLICE AGPS^ENSG00000018510.18 chr2:177482186:+ SP3^ENSG00000172845.17 chr2:173910257:- YES_LDAS 0.0102 GT 1.7232 AG 1.5656 ["INTRACHROMOSOMAL[chr2:3.43Mb]"] AGPAT5--MCPH1 1 0 1.00 0.00 ONLY_REF_SPLICE AGPAT5^ENSG00000155189.12 chr8:6732650:+ MCPH1^ENSG00000147316.13 chr8:6499852:+ YES_LDAS 0.0102 GT 1.8256 AG 1.7968 ["ChimerKB","Klijn_CellLines","DEEPEST2019","Cosmic","CCLE_StarF2019","INTRACHROMOSOMAL[chr8:0.06Mb]","LOCAL_REARRANGEMENT:+:[60134]"] AGO2--TRAPPC9 1 0 1.00 0.00 ONLY_REF_SPLICE AGO2^ENSG00000123908.12 chr8:140585119:- TRAPPC9^ENSG00000167632.18 chr8:140405698:- YES_LDAS 0.0102 GT 1.7056 AG 1.7232 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr8:0.06Mb]","NEIGHBORS[61577]"] AGO2--TRAPPC9 1 0 1.00 0.00 ONLY_REF_SPLICE AGO2^ENSG00000123908.12 chr8:140585119:- TRAPPC9^ENSG00000167632.18 chr8:140360193:- YES_LDAS 0.0102 GT 1.7056 AG 1.8256 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr8:0.06Mb]","NEIGHBORS[61577]"] AGBL5--EPHX1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AGBL5^ENSG00000084693.16 chr2:27056638:+ EPHX1^ENSG00000143819.13 chr1:225845231:+ NO_LDAS 0.0102 AT 1.8892 AC 1.7465 ["INTERCHROMOSOMAL[chr2--chr1]"] AGBL2--NUP50 1 0 1.00 0.00 ONLY_REF_SPLICE AGBL2^ENSG00000165923.16 chr11:47714284:- NUP50^ENSG00000093000.19 chr22:45183402:+ YES_LDAS 0.0102 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr22]"] AGAP5--BMS1P4 1 0 1.00 0.00 ONLY_REF_SPLICE AGAP5^ENSG00000172650.14 chr10:73697095:- BMS1P4^ENSG00000242338.6 chr10:73721504:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr10:0.02Mb]","LOCAL_REARRANGEMENT:-:[17962]"] AGAP4--PLEK2 1 0 0.33 0.00 INCL_NON_REF_SPLICE AGAP4^ENSG00000188234.14 chr10:45826134:- PLEK2^ENSG00000100558.9 chr14:67395517:- NO_LDAS 0.0034 GT 1.7968 AG 1.6895 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr10--chr14]"] AGAP10P--ZRANB1 1 0 0.12 0.00 ONLY_REF_SPLICE AGAP10P^ENSG00000230869.1 chr10:45684520:+ ZRANB1^ENSG00000019995.6 chr10:124966594:+ YES_LDAS 0.0012 GT 1.7465 AG 1.4566 ["INTRACHROMOSOMAL[chr10:79.24Mb]"] AGAP1--ANAPC1 1 0 1.00 0.00 ONLY_REF_SPLICE AGAP1^ENSG00000157985.19 chr2:235883449:+ ANAPC1^ENSG00000153107.13 chr2:111838512:- YES_LDAS 0.0102 GT 1.8256 AG 1.8062 ["INTRACHROMOSOMAL[chr2:123.61Mb]"] AFTPH--UBE2E2 1 0 1.00 0.00 ONLY_REF_SPLICE AFTPH^ENSG00000119844.15 chr2:64553409:+ UBE2E2^ENSG00000182247.10 chr3:23208692:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr3]"] AFTPH--RELCH 1 0 1.00 0.00 ONLY_REF_SPLICE AFTPH^ENSG00000119844.15 chr2:64524612:+ RELCH^ENSG00000134444.15 chr18:62244764:+ YES_LDAS 0.0102 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr18]"] AFMID--IKZF2 1 0 1.00 0.00 ONLY_REF_SPLICE AFMID^ENSG00000183077.15 chr17:78187433:+ IKZF2^ENSG00000030419.16 chr2:213057099:- YES_LDAS 0.0102 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr2]"] AFG1L--BEND3 1 0 1.00 0.00 ONLY_REF_SPLICE AFG1L^ENSG00000135537.17 chr6:108324048:+ BEND3^ENSG00000178409.14 chr6:107070950:- NO_LDAS 0.0102 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr6:1.18Mb]"] AFF2--F11R 1 0 1.00 0.00 INCL_NON_REF_SPLICE AFF2^ENSG00000155966.14 chrX:148904258:+ F11R^ENSG00000158769.18 chr1:161001119:- NO_LDAS 0.0102 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chrX--chr1]"] AEBP2--DELEC1 1 0 1.00 0.00 ONLY_REF_SPLICE AEBP2^ENSG00000139154.16 chr12:19514784:+ DELEC1^ENSG00000173077.16 chr9:115330303:+ NO_LDAS 0.0102 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr12--chr9]"] ADSL--CADM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADSL^ENSG00000239900.14 chr22:40366459:+ CADM2^ENSG00000175161.14 chr3:84959380:+ NO_LDAS 0.0102 GT 1.8256 AG 0.9968 ["INTERCHROMOSOMAL[chr22--chr3]"] ADK--TRDMT1 1 0 1.00 0.00 ONLY_REF_SPLICE ADK^ENSG00000156110.15 chr10:74398579:+ TRDMT1^ENSG00000107614.22 chr10:17174660:- YES_LDAS 0.0102 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr10:56.95Mb]"] ADK--PCNX2 1 0 1.00 0.00 ONLY_REF_SPLICE ADK^ENSG00000156110.15 chr10:74398579:+ PCNX2^ENSG00000135749.19 chr1:233179175:- YES_LDAS 0.0102 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr1]"] ADK--LRSAM1 1 0 1.00 0.00 ONLY_REF_SPLICE ADK^ENSG00000156110.15 chr10:74670269:+ LRSAM1^ENSG00000148356.15 chr9:127501010:+ YES_LDAS 0.0102 GT 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr10--chr9]"] ADIPOR2--ELF1 1 0 1.00 0.00 ONLY_REF_SPLICE ADIPOR2^ENSG00000006831.10 chr12:1754514:+ ELF1^ENSG00000120690.16 chr13:40943144:- YES_LDAS 0.0102 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr13]"] ADGRE5--FBN3 1 0 1.00 0.00 ONLY_REF_SPLICE ADGRE5^ENSG00000123146.20 chr19:14398139:+ FBN3^ENSG00000142449.13 chr19:8129365:- NO_LDAS 0.0102 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr19:6.23Mb]"] ADD1--AC012085.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE ADD1^ENSG00000087274.17 chr4:2882060:+ AC012085.1^ENSG00000186076.5 chr12:93641447:- YES_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr12]"] ADCY7--ABCE1 1 0 1.00 0.00 ONLY_REF_SPLICE ADCY7^ENSG00000121281.13 chr16:50309646:+ ABCE1^ENSG00000164163.11 chr4:145123021:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9219 ["INTERCHROMOSOMAL[chr16--chr4]"] ADCK5--IL3RA 1 0 1.00 0.00 ONLY_REF_SPLICE ADCK5^ENSG00000173137.12 chr8:144383230:+ IL3RA^ENSG00000185291.12 chrX:1378659:+ NO_LDAS 0.0102 GT 1.6729 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chrY]"] ADCK1--LINC01191 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADCK1^ENSG00000063761.16 chr14:77925961:+ LINC01191^ENSG00000234199.3 chr2:114000346:+ NO_LDAS 0.0102 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr2]"] ADARB2--PMAIP1 1 0 1.00 0.00 ONLY_REF_SPLICE ADARB2^ENSG00000185736.16 chr10:1737051:- PMAIP1^ENSG00000141682.12 chr18:59902647:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr18]"] ADAP1--MFSD12 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADAP1^ENSG00000105963.15 chr7:919968:- MFSD12^ENSG00000161091.13 chr19:3538710:- YES_LDAS 0.0102 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr7--chr19]"] ADAMTS12--HNRNPDL 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADAMTS12^ENSG00000151388.11 chr5:33576072:- HNRNPDL^ENSG00000152795.18 chr4:82423601:- YES_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr5--chr4]"] ADAM19--SPATA5L1 1 0 1.00 0.00 ONLY_REF_SPLICE ADAM19^ENSG00000135074.16 chr5:157492973:- SPATA5L1^ENSG00000171763.20 chr15:45421043:+ YES_LDAS 0.0102 GT 1.9899 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr15]"] ADAM19--ANAPC2 1 0 1.00 0.00 ONLY_REF_SPLICE ADAM19^ENSG00000135074.16 chr5:157488265:- ANAPC2^ENSG00000176248.9 chr9:137175837:- YES_LDAS 0.0102 GT 1.9086 AG 1.7968 ["INTERCHROMOSOMAL[chr5--chr9]"] ACYP1--NDUFB2 1 0 1.00 0.00 ONLY_REF_SPLICE ACYP1^ENSG00000119640.9 chr14:75063470:- NDUFB2^ENSG00000090266.13 chr7:140702866:+ YES_LDAS 0.0102 GT 1.9656 AG 1.3996 ["INTERCHROMOSOMAL[chr14--chr7]"] ACY1--AC096708.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACY1^ENSG00000243989.9 chr3:51987196:+ AC096708.1^ENSG00000264236.1 chr18:68993206:- NO_LDAS 0.0102 GT 1.5628 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr18]"] ACVR2A--EPC2 1 0 1.00 0.00 ONLY_REF_SPLICE ACVR2A^ENSG00000121989.15 chr2:147845207:+ EPC2^ENSG00000135999.12 chr2:148690214:+ NO_LDAS 0.0102 GT 1.6895 AG 1.8892 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr2:0.71Mb]"] ACTR8--TCP1 1 0 1.00 0.00 ONLY_REF_SPLICE ACTR8^ENSG00000113812.14 chr3:53876620:- TCP1^ENSG00000120438.12 chr6:159784067:- YES_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr6]"] ACTR3--CBWD1 1 0 0.20 0.00 ONLY_REF_SPLICE ACTR3^ENSG00000115091.12 chr2:113890323:+ CBWD1^ENSG00000172785.18 chr9:172172:- YES_LDAS 0.002 GT 1.7232 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr9]"] ACTN1--DCAF5 1 0 1.00 0.00 ONLY_REF_SPLICE ACTN1^ENSG00000072110.15 chr14:68978952:- DCAF5^ENSG00000139990.18 chr14:69122360:- YES_LDAS 0.0102 GT 1.3996 AG 1.8062 ["DEEPEST2019","TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr14:0.07Mb]","LOCAL_REARRANGEMENT:-:[71441]"] ACSS1--NT5C2 1 0 1.00 0.00 ONLY_REF_SPLICE ACSS1^ENSG00000154930.15 chr20:25030759:- NT5C2^ENSG00000076685.19 chr10:103106706:- YES_LDAS 0.0102 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr10]"] ACSS1--GALNT10 1 0 1.00 0.00 ONLY_REF_SPLICE ACSS1^ENSG00000154930.15 chr20:25030759:- GALNT10^ENSG00000164574.16 chr5:154294816:+ YES_LDAS 0.0102 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr5]"] ACP1--MBOAT2 1 0 1.00 0.00 ONLY_REF_SPLICE ACP1^ENSG00000143727.16 chr2:265007:+ MBOAT2^ENSG00000143797.12 chr2:8882565:- YES_LDAS 0.0102 GT 1.2729 AG 1.7465 ["INTRACHROMOSOMAL[chr2:8.57Mb]"] ACOXL--PPM1K 1 0 1.00 0.00 ONLY_REF_SPLICE ACOXL^ENSG00000153093.20 chr2:110801724:+ PPM1K^ENSG00000163644.15 chr4:88265135:- YES_LDAS 0.0102 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr4]"] ACAP2--BAZ2B 1 0 1.00 0.00 ONLY_REF_SPLICE ACAP2^ENSG00000114331.15 chr3:195442795:- BAZ2B^ENSG00000123636.18 chr2:159478721:- YES_LDAS 0.0102 GT 1.6729 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr2]"] ACAD10--NDUFAF8 1 0 1.00 0.00 ONLY_REF_SPLICE ACAD10^ENSG00000111271.15 chr12:111710365:+ NDUFAF8^ENSG00000224877.4 chr17:81240987:+ YES_LDAS 0.0102 GT 1.8062 AG 1.8256 ["INTERCHROMOSOMAL[chr12--chr17]"] AC253572.1--WDR20 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC253572.1^ENSG00000287979.1 chr1:120850795:- WDR20^ENSG00000140153.18 chr14:102222830:+ NO_LDAS 0.0102 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr14]"] AC246787.2--EZH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC246787.2^ENSG00000244620.1 chr14:105896574:+ EZH2^ENSG00000106462.11 chr7:148847305:- YES_LDAS 0.0102 GT 1.6729 AG 1.9219 ["INTERCHROMOSOMAL[chr14--chr7]"] AC245060.4--CNR1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC245060.4^ENSG00000272779.1 chr22:22304114:+ CNR1^ENSG00000118432.12 chr6:88142281:- NO_LDAS 0.0051 GT 1.4566 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr6]"] AC245014.3--SLC9A8 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC245014.3^ENSG00000276216.1 chr1:145281304:+ SLC9A8^ENSG00000197818.12 chr20:49864728:+ YES_LDAS 0.0102 GT 1.8062 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr20]"] AC242842.2--EIF4ENIF1 1 0 0.11 0.00 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ EIF4ENIF1^ENSG00000184708.18 chr22:31488745:- YES_LDAS 0.0011 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr22]"] AC211476.4--UTP15 1 0 0.10 0.00 ONLY_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73069531:+ UTP15^ENSG00000164338.10 chr5:73576952:+ YES_LDAS 0.001 GT 1.4566 AG 1.5058 ["INTERCHROMOSOMAL[chr7--chr5]"] AC211476.4--ESYT2 1 0 0.12 0.00 ONLY_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73069531:+ ESYT2^ENSG00000117868.17 chr7:158739121:- YES_LDAS 0.0012 GT 1.4566 AG 1.6895 ["INTRACHROMOSOMAL[chr7:85.65Mb]"] AC211476.4--CCDC146 1 0 0.17 0.00 ONLY_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73069531:+ CCDC146^ENSG00000135205.15 chr7:77236947:+ YES_LDAS 0.0017 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr7:4.05Mb]"] AC145207.2--KMT2E 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC145207.2^ENSG00000262413.1 chr17:81868363:+ KMT2E^ENSG00000005483.21 chr7:105111907:+ NO_LDAS 0.0102 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chr7]"] AC136443.1--PPP1CB 1 0 1.00 0.00 ONLY_REF_SPLICE AC136443.1^ENSG00000254609.1 chr16:14727282:- PPP1CB^ENSG00000213639.10 chr2:28776851:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr2]"] AC134349.1--PRR4 1 0 1.00 0.00 ONLY_REF_SPLICE AC134349.1^ENSG00000256712.1 chr12:11171267:- PRR4^ENSG00000111215.12 chr12:10848407:- YES_LDAS 0.0102 GT 1.4566 AG 1.8062 ["INTRACHROMOSOMAL[chr12:0.32Mb]"] AC127502.3--AC127502.1 1 0 0.25 0.00 ONLY_REF_SPLICE AC127502.3^ENSG00000283345.1 chr15:30513698:+ AC127502.1^ENSG00000215302.8 chr15:30474356:+ NO_LDAS 0.0025 GT 1.5329 AG 1.9656 ["INTRACHROMOSOMAL[chr15:0.00Mb]","NEIGHBORS_OVERLAP:+:+:[246]"] AC125494.1--WDR45 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC125494.1^ENSG00000219410.6 chr12:6667946:+ WDR45^ENSG00000196998.19 chrX:49074979:- NO_LDAS 0.0102 GT 1.5850 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chrX]"] AC124944.2--PODXL2 1 0 1.00 0.00 ONLY_REF_SPLICE AC124944.2^ENSG00000260261.2 chr3:195947335:- PODXL2^ENSG00000114631.11 chr3:127668441:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr3:68.24Mb]"] AC123768.4--BCAT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC123768.4^ENSG00000285948.1 chr15:32624213:- BCAT1^ENSG00000060982.15 chr12:24812717:- YES_LDAS 0.0102 GT 1.8295 AG 1.2729 ["INTERCHROMOSOMAL[chr15--chr12]"] AC115223.1--AC010307.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC115223.1^ENSG00000243199.1 chr4:65573719:+ AC010307.1^ENSG00000240611.1 chr5:133173030:- NO_LDAS 0.0051 GT 0.9183 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chr5]"] AC114271.1--RALGDS 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC114271.1^ENSG00000274425.1 chr19:10335195:+ RALGDS^ENSG00000160271.16 chr9:133108709:- YES_LDAS 0.0102 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr9]"] AC112698.1--NACA 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC112698.1^ENSG00000248376.2 chr4:183419612:- NACA^ENSG00000196531.14 chr12:56712908:- NO_LDAS 0.0102 GT 0.9710 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr12]"] AC108488.1--RNASEH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC108488.1^ENSG00000242282.6 chr2:3534113:- RNASEH1^ENSG00000171865.10 chr2:3558231:- YES_LDAS 0.0102 GT 1.9086 AG 1.7819 ["INTRACHROMOSOMAL[chr2:0.00Mb]","LOCAL_REARRANGEMENT:-:[4557]"] AC107027.1--DNAJC13 1 0 1.00 0.00 ONLY_REF_SPLICE AC107027.1^ENSG00000248468.2 chr3:131503084:+ DNAJC13^ENSG00000138246.17 chr3:132516704:+ YES_LDAS 0.0102 GT 1.8295 AG 1.7232 ["INTRACHROMOSOMAL[chr3:0.90Mb]"] AC104248.1--JADE1 1 0 1.00 0.00 ONLY_REF_SPLICE AC104248.1^ENSG00000253796.2 chr8:109063289:- JADE1^ENSG00000077684.16 chr4:128831733:+ YES_LDAS 0.0102 GT 1.6402 AG 1.5656 ["INTERCHROMOSOMAL[chr8--chr4]"] AC104073.4--INPP5A 1 0 1.00 0.00 ONLY_REF_SPLICE AC104073.4^ENSG00000282381.1 chr7:65269538:+ INPP5A^ENSG00000068383.19 chr10:132708313:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr10]"] AC104073.4--FDPS 1 0 1.00 0.00 ONLY_REF_SPLICE AC104073.4^ENSG00000282381.1 chr7:65269538:+ FDPS^ENSG00000160752.15 chr1:155317941:+ NO_LDAS 0.0102 GT 1.6895 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr1]"] AC100823.2--MBD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC100823.2^ENSG00000253564.1 chr8:73216556:- MBD1^ENSG00000141644.17 chr18:50273788:- NO_LDAS 0.0102 GT 1.9219 AG 1.7968 ["INTERCHROMOSOMAL[chr8--chr18]"] AC097500.1--FSIP2-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC097500.1^ENSG00000287129.1 chr2:185950644:- FSIP2-AS1^ENSG00000231646.6 chr2:185800148:- YES_LDAS 0.0102 GT 1.9899 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.15Mb]"] AC093627.5--FLI1 1 0 1.00 0.00 ONLY_REF_SPLICE AC093627.5^ENSG00000242474.3 chr7:148532:- FLI1^ENSG00000151702.17 chr11:128758115:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr11]"] AC093607.1--MZB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC093607.1^ENSG00000250137.1 chr4:23560924:+ MZB1^ENSG00000170476.16 chr5:139389771:- NO_LDAS 0.0102 GT 1.9329 AG 1.2310 ["INTERCHROMOSOMAL[chr4--chr5]"] AC092944.1--TBC1D5 1 0 1.00 0.00 ONLY_REF_SPLICE AC092944.1^ENSG00000243176.6 chr3:157175389:+ TBC1D5^ENSG00000131374.14 chr3:17508605:- NO_LDAS 0.0102 GT 1.7819 AG 1.6402 ["INTRACHROMOSOMAL[chr3:139.43Mb]"] AC091564.2--NOP14-AS1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC091564.2^ENSG00000254400.1 chr11:6604123:- NOP14-AS1^ENSG00000249673.7 chr4:2941691:+ NO_LDAS 0.0051 GT 1.7465 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr4]"] AC091096.1--RCSD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC091096.1^ENSG00000253634.3 chr8:92463089:- RCSD1^ENSG00000198771.11 chr1:167697744:+ NO_LDAS 0.0102 GT 1.7968 AG 1.7232 ["INTERCHROMOSOMAL[chr8--chr1]"] AC091057.6--ARHGAP11A 1 0 0.50 0.00 ONLY_REF_SPLICE AC091057.6^ENSG00000285035.1 chr15:30647714:+ ARHGAP11A^ENSG00000198826.11 chr15:32620108:+ YES_LDAS 0.0051 GT 1.9656 AG 1.5656 ["INTRACHROMOSOMAL[chr15:1.89Mb]"] AC091057.6--AKAP13 1 0 0.50 0.00 ONLY_REF_SPLICE AC091057.6^ENSG00000285035.1 chr15:30647714:+ AKAP13^ENSG00000170776.22 chr15:85664563:+ NO_LDAS 0.0051 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr15:54.66Mb]"] AC090945.1--SGPP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC090945.1^ENSG00000287042.1 chr3:15860177:+ SGPP2^ENSG00000163082.10 chr2:222558347:+ YES_LDAS 0.0102 GT 1.8323 AG 1.6402 ["INTERCHROMOSOMAL[chr3--chr2]"] AC090819.1--ARHGEF10 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC090819.1^ENSG00000253107.1 chr8:110556340:+ ARHGEF10^ENSG00000104728.16 chr8:1929427:+ NO_LDAS 0.0102 GT 1.5058 AG 1.6729 ["INTRACHROMOSOMAL[chr8:108.60Mb]"] AC087500.1--ZBTB18 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC087500.1^ENSG00000261879.7 chr17:5248000:+ ZBTB18^ENSG00000179456.10 chr1:244053788:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr1]"] AC084809.1--AL109627.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC084809.1^ENSG00000226377.2 chr17:32876816:+ AL109627.1^ENSG00000288398.1 chr1:16230904:- YES_LDAS 0.0102 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr1]"] AC079922.1--PSMD4 1 0 0.17 0.00 INCL_NON_REF_SPLICE AC079922.1^ENSG00000231747.1 chr2:112621817:- PSMD4^ENSG00000159352.16 chr1:151262206:+ YES_LDAS 0.0017 AT 1.9656 AC 1.7819 ["INTERCHROMOSOMAL[chr2--chr1]"] AC074286.1--PRKAR1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC074286.1^ENSG00000236501.6 chr2:177033442:- PRKAR1B^ENSG00000188191.15 chr7:727315:- NO_LDAS 0.0102 AT 1.7465 AC 1.3996 ["INTERCHROMOSOMAL[chr2--chr7]"] AC073611.1--SEPTIN2 1 0 1.00 0.00 ONLY_REF_SPLICE AC073611.1^ENSG00000288663.1 chr12:53306320:+ SEPTIN2^ENSG00000168385.18 chr2:241350073:+ NO_LDAS 0.0102 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr2]"] AC073611.1--RPS4XP4 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC073611.1^ENSG00000288663.1 chr12:53297928:+ RPS4XP4^ENSG00000215520.3 chr1:20526330:+ NO_LDAS 0.0102 GT 1.5219 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr1]"] AC073529.1--MID1 1 0 1.00 0.00 ONLY_REF_SPLICE AC073529.1^ENSG00000234129.8 chrX:11055936:- MID1^ENSG00000101871.16 chrX:10567603:- NO_LDAS 0.0102 GT 1.9219 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.01Mb]","NEIGHBORS[13924]"] AC069200.1--SRD5A3 1 0 1.00 0.00 ONLY_REF_SPLICE AC069200.1^ENSG00000273257.2 chr4:55373960:+ SRD5A3^ENSG00000128039.13 chr4:55367588:+ YES_LDAS 0.0102 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr4:0.00Mb]","LOCAL_REARRANGEMENT:+:[537]"] AC068193.1--ILF3 1 0 1.00 0.00 ONLY_REF_SPLICE AC068193.1^ENSG00000287875.1 chr2:58046524:- ILF3^ENSG00000129351.17 chr19:10687346:+ YES_LDAS 0.0102 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr2--chr19]"] AC068051.1--PARP8 1 0 1.00 0.00 ONLY_REF_SPLICE AC068051.1^ENSG00000197585.10 chr2:214684115:- PARP8^ENSG00000151883.19 chr5:50788523:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr5]"] AC027097.1--SCRN1 1 0 1.00 0.00 ONLY_REF_SPLICE AC027097.1^ENSG00000267040.6 chr18:57642052:+ SCRN1^ENSG00000136193.17 chr7:29969068:- YES_LDAS 0.0102 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr7]"] AC026436.1--ZNF141 1 0 0.12 0.00 INCL_NON_REF_SPLICE AC026436.1^ENSG00000248794.1 chr5:81242495:- ZNF141^ENSG00000131127.14 chr4:383095:+ NO_LDAS 0.0012 GT 1.7465 AG 1.5058 ["INTERCHROMOSOMAL[chr5--chr4]"] AC026412.1--CAPRIN2 1 0 0.50 0.00 ONLY_REF_SPLICE AC026412.1^ENSG00000188002.10 chr5:1632845:- CAPRIN2^ENSG00000110888.17 chr12:30753559:- YES_LDAS 0.0051 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr12]"] AC025946.1--IFT74 1 0 1.00 0.00 ONLY_REF_SPLICE AC025946.1^ENSG00000226990.1 chr10:8461175:+ IFT74^ENSG00000096872.17 chr9:27009020:+ NO_LDAS 0.0102 GT 1.9219 AG 1.2366 ["INTERCHROMOSOMAL[chr10--chr9]"] AC025034.1--ATP2B1 1 0 1.00 0.00 ONLY_REF_SPLICE AC025034.1^ENSG00000258302.2 chr12:89561275:+ ATP2B1^ENSG00000070961.16 chr12:89591295:- YES_LDAS 0.0102 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr12:0.01Mb]","NEIGHBORS_OVERLAP:+:-:[6829]"] AC024257.3--NPHP4 1 0 1.00 0.00 ONLY_REF_SPLICE AC024257.3^ENSG00000269514.3 chr12:48198468:+ NPHP4^ENSG00000131697.18 chr1:5961949:- YES_LDAS 0.0102 GT 1.9219 AG 1.5546 ["INTERCHROMOSOMAL[chr12--chr1]"] AC024084.1--MTPN 1 0 1.00 0.00 ONLY_REF_SPLICE AC024084.1^ENSG00000230649.3 chr7:136058505:+ MTPN^ENSG00000105887.11 chr7:135951630:- YES_LDAS 0.0102 GT 1.4566 AG 1.8323 ["INTRACHROMOSOMAL[chr7:0.05Mb]","LOCAL_INVERSION:+:-:[48358]"] AC022400.4--BMS1P4 1 0 1.00 0.00 ONLY_REF_SPLICE AC022400.4^ENSG00000272140.2 chr10:73713204:- BMS1P4^ENSG00000242338.6 chr10:73721504:- YES_LDAS 0.0102 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr10:0.00Mb]","LOCAL_REARRANGEMENT:-:[2262]"] AC022211.4--CORO1C 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC022211.4^ENSG00000279035.1 chr17:75131184:+ CORO1C^ENSG00000110880.11 chr12:108701323:- YES_LDAS 0.0102 GT 1.5628 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr12]"] AC021851.2--VPS28 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC021851.2^ENSG00000287621.1 chr2:183493363:+ VPS28^ENSG00000160948.14 chr8:144425772:- NO_LDAS 0.0102 GT 0.9710 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr8]"] AC021739.2--AGGF1 1 0 1.00 0.00 ONLY_REF_SPLICE AC021739.2^ENSG00000259407.1 chr15:85750242:- AGGF1^ENSG00000164252.13 chr5:77046347:+ NO_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr5]"] AC021678.2--LRGUK 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC021678.2^ENSG00000253690.1 chr8:28339026:- LRGUK^ENSG00000155530.3 chr7:134123776:+ YES_LDAS 0.0102 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr7]"] AC020765.6--XPO6 1 0 1.00 0.00 ONLY_REF_SPLICE AC020765.6^ENSG00000288656.1 chr16:28620063:- XPO6^ENSG00000169180.12 chr16:28169909:- YES_LDAS 0.0102 GT 1.9656 AG 1.8323 ["INTRACHROMOSOMAL[chr16:0.38Mb]"] AC020765.3--H1-2 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC020765.3^ENSG00000278665.1 chr16:28599566:- H1-2^ENSG00000187837.4 chr6:26055903:- NO_LDAS 0.0051 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr6]"] AC019294.2--CCDC115 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC019294.2^ENSG00000260288.4 chr15:75758697:+ CCDC115^ENSG00000136710.10 chr2:130341944:- NO_LDAS 0.0102 GT 1.4716 AG 1.5656 ["INTERCHROMOSOMAL[chr15--chr2]"] AC016831.6--SRPK2 1 0 1.00 0.00 ONLY_REF_SPLICE AC016831.6^ENSG00000285106.2 chr7:131052425:- SRPK2^ENSG00000135250.17 chr7:105268869:- YES_LDAS 0.0102 GT 1.9656 AG 1.5546 ["INTRACHROMOSOMAL[chr7:25.46Mb]"] AC016629.1--RPL23AP82 1 0 1.00 0.00 ONLY_REF_SPLICE AC016629.1^ENSG00000269032.1 chr19:58586356:+ RPL23AP82^ENSG00000184319.16 chr22:50798655:+ YES_LDAS 0.0102 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr22]"] AC015911.9--ZNF654 1 0 1.00 0.00 ONLY_REF_SPLICE AC015911.9^ENSG00000286030.2 chr17:35522279:- ZNF654^ENSG00000175105.8 chr3:88113115:+ YES_LDAS 0.0102 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr3]"] AC015871.8--GDPD5 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC015871.8^ENSG00000288604.1 chr15:79923437:- GDPD5^ENSG00000158555.15 chr11:75517426:- NO_LDAS 0.0102 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr15--chr11]"] AC015712.1--C2orf69 1 0 0.50 0.00 ONLY_REF_SPLICE AC015712.1^ENSG00000232386.9 chr15:100855348:+ C2orf69^ENSG00000178074.6 chr2:199925062:+ NO_LDAS 0.0051 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr15--chr2]"] AC013356.1--WAC-AS1 1 0 0.25 0.00 INCL_NON_REF_SPLICE AC013356.1^ENSG00000244251.1 chr15:40480923:- WAC-AS1^ENSG00000254635.6 chr10:28524611:- YES_LDAS 0.0025 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr10]"] AC011369.2--CORO1C 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC011369.2^ENSG00000279739.1 chr5:168130022:+ CORO1C^ENSG00000110880.11 chr12:108648766:- NO_LDAS 0.0051 GT 1.2867 AG 1.8323 ["INTERCHROMOSOMAL[chr5--chr12]"] AC010618.3--KANK2 1 0 1.00 0.00 ONLY_REF_SPLICE AC010618.3^ENSG00000269439.6 chr19:17511343:- KANK2^ENSG00000197256.11 chr19:11178720:- YES_LDAS 0.0102 GT 1.6895 AG 1.9219 ["INTRACHROMOSOMAL[chr19:6.29Mb]"] AC009403.1--GPR107 1 0 1.00 0.00 ONLY_REF_SPLICE AC009403.1^ENSG00000216895.9 chr7:155643468:- GPR107^ENSG00000148358.20 chr9:130092248:+ YES_LDAS 0.0102 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr9]"] AC009403.1--CNOT4 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC009403.1^ENSG00000216895.9 chr7:155642786:- CNOT4^ENSG00000080802.19 chr7:135394415:- NO_LDAS 0.0102 GT 1.7968 AG 1.7465 ["INTRACHROMOSOMAL[chr7:20.10Mb]"] AC009315.1--FSIP2 1 0 1.00 0.00 ONLY_REF_SPLICE AC009315.1^ENSG00000286797.1 chr2:185483091:+ FSIP2^ENSG00000188738.15 chr2:185739346:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.23Mb]"] AC009315.1--FSIP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC009315.1^ENSG00000286797.1 chr2:185502739:+ FSIP2^ENSG00000188738.15 chr2:185739346:+ YES_LDAS 0.0102 GT 1.7056 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.23Mb]"] AC009133.2--SLC7A5P2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC009133.2^ENSG00000259952.1 chr16:29807250:- SLC7A5P2^ENSG00000258186.2 chr16:21520302:- NO_LDAS 0.0102 GT 1.7056 AG 1.6402 ["INTRACHROMOSOMAL[chr16:8.29Mb]"] AC009133.1--TNXB 1 0 1.00 0.00 ONLY_REF_SPLICE AC009133.1^ENSG00000238045.9 chr16:29819540:- TNXB^ENSG00000168477.19 chr6:32098206:- YES_LDAS 0.0102 GT 1.5628 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr6]"] AC009093.8--IL21R 1 0 1.00 0.00 ONLY_REF_SPLICE AC009093.8^ENSG00000284649.1 chr16:29116326:+ IL21R^ENSG00000103522.16 chr16:27430056:+ YES_LDAS 0.0102 GT 1.8892 AG 1.7968 ["INTRACHROMOSOMAL[chr16:1.66Mb]"] AC009093.8--AC025279.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC009093.8^ENSG00000284649.1 chr16:29116326:+ AC025279.2^ENSG00000260413.1 chr16:29302287:+ YES_LDAS 0.0102 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr16:0.20Mb]"] AC009053.1--WDR59 1 0 0.50 0.00 ONLY_REF_SPLICE AC009053.1^ENSG00000214331.8 chr16:74332567:- WDR59^ENSG00000103091.15 chr16:74938266:- YES_LDAS 0.0051 GT 1.9086 AG 1.6895 ["INTRACHROMOSOMAL[chr16:0.50Mb]"] AC009053.1--AP3B1 1 0 1.00 0.00 ONLY_REF_SPLICE AC009053.1^ENSG00000214331.8 chr16:74332567:- AP3B1^ENSG00000132842.14 chr5:78216237:- YES_LDAS 0.0102 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr16--chr5]"] AC009021.1--RRN3 1 0 1.00 0.00 ONLY_REF_SPLICE AC009021.1^ENSG00000260905.1 chr16:22613454:- RRN3^ENSG00000085721.13 chr16:15092614:- NO_LDAS 0.0102 GT 1.5301 AG 1.9086 ["INTRACHROMOSOMAL[chr16:7.52Mb]"] AC008740.2--CRYM-AS1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC008740.2^ENSG00000276548.1 chr16:21401194:+ CRYM-AS1^ENSG00000189149.12 chr16:21315907:+ YES_LDAS 0.0051 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr16:0.06Mb]","LOCAL_REARRANGEMENT:+:[62052]"] AC008740.2--CRYM-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC008740.2^ENSG00000276548.1 chr16:21401194:+ CRYM-AS1^ENSG00000189149.12 chr16:21315884:+ YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.06Mb]","LOCAL_REARRANGEMENT:+:[62052]"] AC008267.5--AC006001.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC008267.5^ENSG00000244510.2 chr7:66479009:- AC006001.3^ENSG00000229180.7 chr7:66588580:- NO_LDAS 0.0102 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chr7:0.04Mb]","LOCAL_REARRANGEMENT:-:[35980]"] AC007216.5--SNX29P1 1 0 0.10 0.00 INCL_NON_REF_SPLICE AC007216.5^ENSG00000277458.1 chr16:11926304:+ SNX29P1^ENSG00000158482.10 chr16:21380145:+ YES_LDAS 0.001 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr16:9.45Mb]"] AC006355.1--HNRNPA1P10 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC006355.1^ENSG00000229110.1 chr7:79125341:+ HNRNPA1P10^ENSG00000214223.4 chr19:11666408:- NO_LDAS 0.0051 GT 1.9086 AG 1.5329 ["INTERCHROMOSOMAL[chr7--chr19]"] AC005670.3--CLASP1 1 0 1.00 0.00 ONLY_REF_SPLICE AC005670.3^ENSG00000262879.6 chr17:47099835:- CLASP1^ENSG00000074054.20 chr2:121469960:- YES_LDAS 0.0102 GT 1.9899 AG 1.7968 ["INTERCHROMOSOMAL[chr17--chr2]"] AC005339.1--RPL27 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC005339.1^ENSG00000268565.1 chr19:4655334:- RPL27^ENSG00000131469.15 chr17:42998778:+ NO_LDAS 0.0102 GT 1.4295 AG 1.5219 ["INTERCHROMOSOMAL[chr19--chr17]"] AC005332.4--SLC29A2 1 0 0.50 0.00 ONLY_REF_SPLICE AC005332.4^ENSG00000274712.2 chr17:68206238:+ SLC29A2^ENSG00000174669.12 chr11:66367869:- NO_LDAS 0.0051 GT 1.7819 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr11]"] AC004980.4--AC091390.3 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC004980.4^ENSG00000250778.1 chr7:76522028:+ AC091390.3^ENSG00000239969.5 chr7:102376253:+ YES_LDAS 0.0051 GT 1.9656 AG 1.3996 ["INTRACHROMOSOMAL[chr7:25.84Mb]"] AC004980.3--EZH2 1 0 0.25 0.00 INCL_NON_REF_SPLICE AC004980.3^ENSG00000230305.2 chr7:76527852:+ EZH2^ENSG00000106462.11 chr7:148832750:- YES_LDAS 0.0025 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr7:72.27Mb]"] AC004980.1--NOL8 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004980.1^ENSG00000205485.13 chr7:76549675:+ NOL8^ENSG00000198000.12 chr9:92315662:- YES_LDAS 0.0102 AT 1.3996 AC 1.5219 ["INTERCHROMOSOMAL[chr7--chr9]"] AC004967.1--LMTK2 1 0 1.00 0.00 ONLY_REF_SPLICE AC004967.1^ENSG00000243554.1 chr7:97972135:- LMTK2^ENSG00000164715.6 chr7:98151382:+ YES_LDAS 0.0102 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr7:0.13Mb]"] AC004812.2--MAP3K9 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004812.2^ENSG00000277283.1 chr12:120117206:+ MAP3K9^ENSG00000006432.16 chr14:70809081:- NO_LDAS 0.0102 GT 1.2310 AG 0.9183 ["INTERCHROMOSOMAL[chr12--chr14]"] AC004692.1--RPL18AP16 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004692.1^ENSG00000213717.3 chr7:43274307:+ RPL18AP16^ENSG00000237793.3 chrX:153662321:+ NO_LDAS 0.0102 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chrX]"] AC004687.1--CFAP97 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004687.1^ENSG00000265206.5 chr17:58332470:- CFAP97^ENSG00000164323.14 chr4:185191212:- YES_LDAS 0.0102 GT 1.7968 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr4]"] AC004687.1--CD37 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004687.1^ENSG00000265206.5 chr17:58331154:- CD37^ENSG00000104894.12 chr19:49335714:+ YES_LDAS 0.0102 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr19]"] AC004083.1--TMEM64 1 0 1.00 0.00 ONLY_REF_SPLICE AC004083.1^ENSG00000254180.2 chr8:90618949:- TMEM64^ENSG00000180694.14 chr8:90631707:- YES_LDAS 0.0102 GT 1.6895 AG 1.8062 ["INTRACHROMOSOMAL[chr8:0.00Mb]","LOCAL_REARRANGEMENT:-:[1918]"] AC004009.3--PACRGL 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004009.3^ENSG00000279655.1 chr7:27380711:+ PACRGL^ENSG00000163138.19 chr4:20704466:+ NO_LDAS 0.0102 GT 1.4256 AG 1.5628 ["INTERCHROMOSOMAL[chr7--chr4]"] AC003957.1--AC010978.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC003957.1^ENSG00000279825.1 chr17:19031565:+ AC010978.1^ENSG00000235522.6 chr2:105855285:- NO_LDAS 0.0051 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr2]"] AC002116.2--ANKLE2 1 0 1.00 0.00 ONLY_REF_SPLICE AC002116.2^ENSG00000267698.1 chr19:36019384:+ ANKLE2^ENSG00000176915.15 chr12:132755133:- YES_LDAS 0.0102 GT 1.5850 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr12]"] ABTB2--ELL 1 0 0.50 0.00 INCL_NON_REF_SPLICE ABTB2^ENSG00000166016.6 chr11:34357228:- ELL^ENSG00000105656.13 chr19:18450683:- NO_LDAS 0.0051 GT 1.5329 AG 1.5546 ["INTERCHROMOSOMAL[chr11--chr19]"] ABRAXAS1--MRPS14 1 0 1.00 0.00 ONLY_REF_SPLICE ABRAXAS1^ENSG00000163322.14 chr4:83482154:- MRPS14^ENSG00000120333.4 chr1:175011751:- YES_LDAS 0.0102 GT 1.6402 AG 1.5219 ["INTERCHROMOSOMAL[chr4--chr1]"] ABRACL--HIVEP2 1 0 1.00 0.00 ONLY_REF_SPLICE ABRACL^ENSG00000146386.8 chr6:139034221:+ HIVEP2^ENSG00000010818.10 chr6:142837047:- YES_LDAS 0.0102 GT 1.8256 AG 1.9086 ["INTRACHROMOSOMAL[chr6:3.71Mb]"] ABR--TRAF3IP1 1 0 1.00 0.00 ONLY_REF_SPLICE ABR^ENSG00000159842.15 chr17:1228793:- TRAF3IP1^ENSG00000204104.12 chr2:238347455:+ NO_LDAS 0.0102 GT 1.9219 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr2]"] ABR--PSMA7 1 0 1.00 0.00 ONLY_REF_SPLICE ABR^ENSG00000159842.15 chr17:1125183:- PSMA7^ENSG00000101182.15 chr20:62140944:- YES_LDAS 0.0102 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr20]"] ABL2--PRKACA 1 0 1.00 0.00 INCL_NON_REF_SPLICE ABL2^ENSG00000143322.21 chr1:179229634:- PRKACA^ENSG00000072062.15 chr19:14117511:- NO_LDAS 0.0102 GT 0.9183 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr19]"] ABI3--ANKRD24 1 0 1.00 0.00 INCL_NON_REF_SPLICE ABI3^ENSG00000108798.9 chr17:49210835:+ ANKRD24^ENSG00000089847.12 chr19:4210082:+ YES_LDAS 0.0102 GT 1.9656 AG 1.5219 ["INTERCHROMOSOMAL[chr17--chr19]"] ABHD3--USP14 1 0 1.00 0.00 ONLY_REF_SPLICE ABHD3^ENSG00000158201.10 chr18:21702316:- USP14^ENSG00000101557.15 chr18:192842:+ YES_LDAS 0.0102 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr18:21.44Mb]"] ABHD18--SLC10A7 1 0 1.00 0.00 ONLY_REF_SPLICE ABHD18^ENSG00000164074.16 chr4:127965606:+ SLC10A7^ENSG00000120519.15 chr4:146503924:- YES_LDAS 0.0102 GT 1.7968 AG 1.9329 ["INTRACHROMOSOMAL[chr4:18.21Mb]"] ABCF1--MYO1C 1 0 1.00 0.00 ONLY_REF_SPLICE ABCF1^ENSG00000204574.14 chr6:30571560:+ MYO1C^ENSG00000197879.17 chr17:1470689:- YES_LDAS 0.0102 GT 1.8062 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr17]"] ABCC5--STK16 1 0 1.00 0.00 ONLY_REF_SPLICE ABCC5^ENSG00000114770.17 chr3:183987770:- STK16^ENSG00000115661.14 chr2:219248193:+ YES_LDAS 0.0102 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr2]"] ABCA5--ALG14 1 0 1.00 0.00 INCL_NON_REF_SPLICE ABCA5^ENSG00000154265.16 chr17:69254315:- ALG14^ENSG00000172339.10 chr1:95064872:- NO_LDAS 0.0102 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr1]"] AATK--NELFB 1 0 1.00 0.00 INCL_NON_REF_SPLICE AATK^ENSG00000181409.14 chr17:81126474:- NELFB^ENSG00000188986.9 chr9:137263037:+ NO_LDAS 0.0102 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr17--chr9]"] AAK1--MRPS27 1 0 1.00 0.00 ONLY_REF_SPLICE AAK1^ENSG00000115977.21 chr2:69642878:- MRPS27^ENSG00000113048.17 chr5:72297702:- YES_LDAS 0.0102 GT 1.6729 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr5]"] WASH5P--WASH6P 1 1 1.00 1.00 ONLY_REF_SPLICE WASH5P^ENSG00000282458.1 chr19:66346:- WASH6P^ENSG00000182484.15 chrX:156021999:+ YES_LDAS 0.0204 GT 1.9656 AG 1.8256 ["GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chrX]"] UVSSA--MAEA 1 1 1.00 1.00 ONLY_REF_SPLICE UVSSA^ENSG00000163945.19 chr4:1355245:+ MAEA^ENSG00000090316.16 chr4:1311979:+ YES_LDAS 0.0204 GT 1.3383 AG 1.9086 ["DEEPEST2019","INTRACHROMOSOMAL[chr4:0.01Mb]","LOCAL_REARRANGEMENT:+:[5544]"] UMAD1--GLCCI1 1 1 1.00 0.10 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7673453:+ GLCCI1^ENSG00000106415.13 chr7:8003908:+ YES_LDAS 0.0112 GT 1.8295 AG 1.7465 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[776]"] FOXO1--LINC00598 1 1 1.00 0.17 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40474095:- YES_LDAS 0.0119 GT 1.7232 AG 1.8295 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXO1--LINC00598 1 1 1.00 0.17 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40470162:- YES_LDAS 0.0119 GT 1.7232 AG 1.8295 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXO1--LINC00598 1 1 1.00 0.17 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40466677:- YES_LDAS 0.0119 GT 1.7232 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXO1--LINC00598 1 1 1.00 0.17 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40460406:- YES_LDAS 0.0119 GT 1.7232 AG 1.7465 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"]