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Filename
FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008/B23LG7FLT4/nfcore_rnafusion_100M__1bb6229e--20260226-142939/starfusion/FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
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1.0 KB
Published
Feb 26, 2026 11:32 PM
STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: FFPE_V4_0001_RNA_0001_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 2596
Pass (CALL=1): 16 (0.6%)
Fail (CALL=0): 2580 (99.4%)

Blacklist Flagging:
  Total blacklisted: 114
  All blacklisted fusions have CALL=0

Failure Reasons:
  Read count too low: 1 < 5: 1634
  Excluded SpliceType: INCL_NON_REF_SPLICE: 792
  Blacklisted: 114
  Excluded annotation pattern: HGNC_GENEFAM: 21
  Read count too low: 2 < 5: 12
  Read count too low: 3 < 5: 3
  Excluded annotation pattern: GTEx_recurrent_StarF2019: 2
  Does not meet inclusion criteria: 1
  Excluded annotation pattern: DGD_PARALOGS: 1

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 0 pass, 833 fail (total: 833)
  ONLY_REF_SPLICE: 16 pass, 1747 fail (total: 1763)