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Filename
U118MG_FFPE_RNA_0001_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008/B23LG7FLT4/nfcore_rnafusion_100M__1bb6229e--20260226-142939/fusioninspector/U118MG_FFPE_RNA_0001_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
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13.0 KB
Workflow Run
dev_rna_exp0008_1bb6229e
Published
Feb 26, 2026 11:36 PM

Content

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
GOPC--ROS1 342 3 342.00 3.00 GOPC^ENSG00000047932.14 9512 chr6:117566854:- ROS1^ENSG00000047936.11 53814 chr6:117321394:- ONLY_REF_SPLICE YES 25 29 13.31 11.53 GT 1.7968 AG 1.9329 3.5087 1252 0
GOPC--ROS1 6 0 6.00 0.00 GOPC^ENSG00000047932.14 9512 chr6:117566854:- ROS1^ENSG00000047936.11 54950 chr6:117320030:- ONLY_REF_SPLICE YES 25 465 0.27 0.02 GT 1.7968 AG 1.5301 0.061 141 0
PTPN21--CEP128 122 5 122.00 4.88 PTPN21^ENSG00000070778.13 3609 chr14:88550238:- CEP128^ENSG00000100629.17 45539 chr14:80838278:- ONLY_REF_SPLICE YES 114 45 1.11 2.78 GT 1.7232 AG 1.9329 1.2904 1026 0
PTPN21--CEP128 3 5 3.00 0.12 PTPN21^ENSG00000070778.13 4732 chr14:88547529:- CEP128^ENSG00000100629.17 45539 chr14:80838278:- ONLY_REF_SPLICE YES 67 45 0.13 0.20 GT 1.8892 AG 1.9329 0.0317 1628 0
PTPN21--CEP128 4 0 4.00 0.00 PTPN21^ENSG00000070778.13 3609 chr14:88550238:- CEP128^ENSG00000100629.17 47747 chr14:80831294:- ONLY_REF_SPLICE YES 114 36 0.04 0.14 GT 1.7232 AG 1.6402 0.0407 1579 0
AC092691.1--LSAMP 102 0 102.00 0.00 AC092691.1^ENSG00000239268.3 1411 chr3:117997182:- LSAMP^ENSG00000185565.12 10860 chr3:116444955:- ONLY_REF_SPLICE YES 0 23 103.00 4.29 GT 1.8892 AG 1.9329 1.0374 271 0
AC092691.1--LSAMP 1 0 1.00 0.00 AC092691.1^ENSG00000239268.3 1411 chr3:117997182:- LSAMP^ENSG00000185565.12 15400 chr3:115852617:- ONLY_REF_SPLICE YES 0 82 2.00 0.02 GT 1.8892 AG 1.5219 0.0102 4768 0
ARFGEF1--PREX2 80 2 80.00 2.00 ARFGEF1^ENSG00000066777.9 1618 chr8:67343164:- PREX2^ENSG00000046889.19 48514 chr8:68017846:+ ONLY_REF_SPLICE YES 95 16 0.86 4.88 GT 1.7232 AG 1.9329 0.8339 1203 0
ARFGEF1--PREX2 1 0 1.00 0.00 ARFGEF1^ENSG00000066777.9 1618 chr8:67343164:- PREX2^ENSG00000046889.19 50709 chr8:68022036:+ ONLY_REF_SPLICE YES 95 101 0.02 0.02 GT 1.7232 AG 1.8892 0.0102 3339 0
ARFGEF1--PREX2 1 0 1.00 0.00 ARFGEF1^ENSG00000066777.9 1618 chr8:67343164:- PREX2^ENSG00000046889.19 54078 chr8:68038159:+ ONLY_REF_SPLICE YES 95 128 0.02 0.02 GT 1.7232 AG 1.9656 0.0102 4386 0
LINC01674--POTED 31 0 31.00 0.00 LINC01674^ENSG00000228159.2 6698 chr21:13565781:+ POTED^ENSG00000166351.10 12994 chr21:13615123:+ ONLY_REF_SPLICE YES 0 19 32.00 1.60 GT 1.7232 AG 1.8892 0.3153 1780 0
LINC01674--POTED 4 0 4.00 0.00 LINC01674^ENSG00000228159.2 1165 chr21:13516271:+ POTED^ENSG00000166351.10 12994 chr21:13615123:+ ONLY_REF_SPLICE YES 0 19 5.00 0.25 GT 1.8892 AG 1.8892 0.0407 3739 0
LINC01674--POTED 3 0 3.00 0.00 LINC01674^ENSG00000228159.2 6698 chr21:13565781:+ POTED^ENSG00000166351.10 22104 chr21:13630941:+ ONLY_REF_SPLICE YES 0 21 4.00 0.18 GT 1.7232 AG 1.4566 0.0305 1346 0
LINC01674--POTED 1 0 1.00 0.00 LINC01674^ENSG00000228159.2 6698 chr21:13565781:+ POTED^ENSG00000166351.10 19988 chr21:13628382:+ ONLY_REF_SPLICE YES 0 19 2.00 0.10 GT 1.7232 AG 1.7232 0.0102 2616 0
KHDRBS1--ARMH1 23 0 23.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 21390 chr1:44689676:+ ONLY_REF_SPLICE YES 362 27 0.07 0.86 GT 1.4566 AG 1.9656 0.2339 3092 0
KHDRBS1--ARMH1 4 0 4.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 21456 chr1:44689742:+ ONLY_REF_SPLICE YES 362 46 0.01 0.11 GT 1.4566 AG 1.7465 0.0407 3089 0
KHDRBS1--ARMH1 3 0 3.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 25839 chr1:44700923:+ ONLY_REF_SPLICE YES 362 63 0.01 0.06 GT 1.4566 AG 1.9899 0.0305 2917 0
KHDRBS1--ARMH1 3 0 3.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 19910 chr1:44688196:+ ONLY_REF_SPLICE YES 362 12 0.01 0.31 GT 1.4566 AG 1.9329 0.0305 3516 0
KHDRBS1--ARMH1 1 0 1.00 0.00 KHDRBS1^ENSG00000121774.18 2635 chr1:32030422:+ ARMH1^ENSG00000198520.12 19910 chr1:44688196:+ ONLY_REF_SPLICE YES 435 12 0.00 0.15 GT 1.8892 AG 1.9329 0.0102 4528 0
KHDRBS1--ARMH1 1 0 1.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 27036 chr1:44704089:+ ONLY_REF_SPLICE YES 362 47 0.01 0.04 GT 1.4566 AG 1.9656 0.0102 1874 0
KHDRBS1--ARMH1 1 0 1.00 0.00 KHDRBS1^ENSG00000121774.18 1510 chr1:32014377:+ ARMH1^ENSG00000198520.12 25839 chr1:44700923:+ ONLY_REF_SPLICE YES 516 63 0.00 0.03 GT 1.8892 AG 1.9899 0.0102 2581 0
KHDRBS1--ARMH1 1 0 1.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 20823 chr1:44689109:+ ONLY_REF_SPLICE YES 362 11 0.01 0.17 GT 1.4566 AG 1.8295 0.0102 3181 0
AK2--TESK2 13 0 13.00 0.00 AK2^ENSG00000004455.17 3067 chr1:33036736:- TESK2^ENSG00000070759.17 30956 chr1:45345558:- ONLY_REF_SPLICE YES 658 58 0.02 0.24 GT 1.7819 AG 1.9086 0.1322 895 0
AK2--TESK2 6 0 6.00 0.00 AK2^ENSG00000004455.17 3067 chr1:33036736:- TESK2^ENSG00000070759.17 30520 chr1:45345994:- ONLY_REF_SPLICE YES 658 37 0.01 0.18 GT 1.7819 AG 1.9656 0.061 1329 0
MIER1--CD177 12 0 12.00 0.00 MIER1^ENSG00000198160.15 2302 chr1:66926242:+ CD177^ENSG00000204936.10 27594 chr19:43353853:+ ONLY_REF_SPLICE YES 213 5 0.06 2.17 GT 1.8892 AG 1.7968 0.122 5564 0
MIER1--CD177 5 0 5.00 0.00 MIER1^ENSG00000198160.15 2302 chr1:66926242:+ CD177^ENSG00000204936.10 27948 chr19:43354207:+ ONLY_REF_SPLICE YES 213 12 0.03 0.46 GT 1.8892 AG 1.8062 0.0509 5210 0
PSMD8--RYR1 12 0 12.00 0.00 PSMD8^ENSG00000099341.12 6401 chr19:38382228:+ RYR1^ENSG00000196218.13 41065 chr19:38489177:+ ONLY_REF_SPLICE YES 318 22 0.04 0.57 GT 1.8062 AG 1.8323 0.122 84 1
PPTC7--TCTN1 11 0 11.00 0.00 PPTC7^ENSG00000196850.6 1510 chr12:110582809:- TCTN1^ENSG00000204852.17 36709 chr12:110647211:+ ONLY_REF_SPLICE YES 132 223 0.09 0.05 GT 1.7056 AG 1.8892 0.1119 2740 0
RPSAP52--HMGA2 11 0 11.00 0.00 RPSAP52^ENSG00000241749.4 1155 chr12:65826843:- HMGA2^ENSG00000149948.14 8958 chr12:65828001:+ ONLY_REF_SPLICE YES 6 1559 1.71 0.01 GT 1.9329 AG 1.8256 0.1119 799 0
TMED5--DR1 9 0 9.00 0.00 TMED5^ENSG00000117500.13 1463 chr1:93180054:- DR1^ENSG00000117505.13 19171 chr1:93353908:+ ONLY_REF_SPLICE YES 590 353 0.02 0.03 GT 1.8892 AG 1.9329 0.0915 1482 0
AC006453.1--FAM230C 8 0 8.00 0.00 AC006453.1^ENSG00000283132.1 3417 chr2:89631890:- FAM230C^ENSG00000279516.2 14493 chr13:18218999:+ ONLY_REF_SPLICE YES 110 2 0.08 3.00 GT 1.8892 AG 1.9329 0.0814 1981 0
CARHSP1--PDILT 8 0 8.00 0.00 CARHSP1^ENSG00000153048.11 1047 chr16:8868966:- PDILT^ENSG00000169340.10 18943 chr16:20376201:- ONLY_REF_SPLICE YES 90 7 0.10 1.12 GT 1.8323 AG 1.7819 0.0814 1378 0
CARHSP1--PDILT 5 0 5.00 0.00 CARHSP1^ENSG00000153048.11 1047 chr16:8868966:- PDILT^ENSG00000169340.10 22536 chr16:20369689:- ONLY_REF_SPLICE YES 90 33 0.07 0.18 GT 1.8323 AG 1.3996 0.0509 1673 0
VCL--ADK 8 0 8.00 0.00 VCL^ENSG00000035403.18 3233 chr10:73998375:+ ADK^ENSG00000156110.15 57954 chr10:74708321:+ ONLY_REF_SPLICE YES 785 406 0.01 0.02 GT 1.8892 AG 1.7968 0.0814 1017 0
CEP128--ALDH6A1 7 0 7.00 0.00 CEP128^ENSG00000100629.17 15635 chr14:80840682:- ALDH6A1^ENSG00000119711.13 43770 chr14:74075017:- ONLY_REF_SPLICE YES 48 103 0.16 0.08 GT 1.7232 AG 1.8892 0.0712 4764 0
GDF5--UQCC1 6 0 6.00 0.00 GDF5^ENSG00000125965.9 4194 chr20:35437298:- UQCC1^ENSG00000101019.22 12542 chr20:35394196:- ONLY_REF_SPLICE YES 235 283 0.03 0.02 GT 1.8323 AG 1.8062 0.061 2232 0
GDF5--UQCC1 1 0 1.00 0.00 GDF5^ENSG00000125965.9 2263 chr20:35441232:- UQCC1^ENSG00000101019.22 12542 chr20:35394196:- ONLY_REF_SPLICE YES 0 283 2.00 0.01 GT 1.9656 AG 1.8062 0.0102 1008 0
SPOCD1--ADGRB2 6 0 6.00 0.00 SPOCD1^ENSG00000134668.12 12592 chr1:31792678:- ADGRB2^ENSG00000121753.13 23002 chr1:31756815:- ONLY_REF_SPLICE YES 379 108 0.02 0.06 GT 1.5656 AG 1.6895 0.061 480 0
SPOCD1--ADGRB2 3 0 3.00 0.00 SPOCD1^ENSG00000134668.12 13055 chr1:31792215:- ADGRB2^ENSG00000121753.13 23002 chr1:31756815:- ONLY_REF_SPLICE YES 317 108 0.01 0.04 GT 1.7465 AG 1.6895 0.0305 270 0
ARFGEF1--RALBP1 5 0 5.00 0.00 ARFGEF1^ENSG00000066777.9 1618 chr8:67343164:- RALBP1^ENSG00000017797.13 50269 chr18:9479344:+ ONLY_REF_SPLICE YES 94 44 0.06 0.13 GT 1.7232 AG 1.7819 0.0509 1217 0
TPTE--BAGE2 5 0 5.00 0.00 TPTE^ENSG00000274391.5 3309 chr21:10527412:+ BAGE2^ENSG00000187172.15 45067 chr21:10514122:+ ONLY_REF_SPLICE YES 87 74 0.07 0.08 GT 1.9656 AG 1.7819 0.0509 9593 0
TPTE--BAGE2 3 0 3.00 0.00 TPTE^ENSG00000274391.5 3309 chr21:10527412:+ BAGE2^ENSG00000187172.15 42788 chr21:10499475:+ ONLY_REF_SPLICE YES 87 123 0.05 0.03 GT 1.9656 AG 1.8323 0.0305 7385 0
TPTE--BAGE2 3 0 3.00 0.00 TPTE^ENSG00000274391.5 6471 chr21:10542448:+ BAGE2^ENSG00000187172.15 31757 chr21:10454134:+ ONLY_REF_SPLICE YES 204 678 0.02 0.01 GT 1.7465 AG 1.7968 0.0305 4078 0
TPTE--BAGE2 2 1 2.00 0.50 TPTE^ENSG00000274391.5 8465 chr21:10552716:+ BAGE2^ENSG00000187172.15 31757 chr21:10454134:+ ONLY_REF_SPLICE YES 175 678 0.02 0.01 GT 1.8295 AG 1.7968 0.0254 2432 0
TPTE--BAGE2 2 0 2.00 0.00 TPTE^ENSG00000274391.5 2251 chr21:10524688:+ BAGE2^ENSG00000187172.15 31757 chr21:10454134:+ ONLY_REF_SPLICE YES 47 678 0.06 0.00 GT 1.9086 AG 1.7968 0.0203 5030 0
TPTE--BAGE2 2 0 2.00 0.00 TPTE^ENSG00000274391.5 3309 chr21:10527412:+ BAGE2^ENSG00000187172.15 31757 chr21:10454134:+ ONLY_REF_SPLICE YES 87 678 0.03 0.00 GT 1.9656 AG 1.7968 0.0203 4448 0
TPTE--BAGE2 1 1 1.00 0.25 TPTE^ENSG00000274391.5 8465 chr21:10552716:+ BAGE2^ENSG00000187172.15 42788 chr21:10499475:+ ONLY_REF_SPLICE YES 175 123 0.02 0.02 GT 1.8295 AG 1.8323 0.0127 4770 0
TPTE--BAGE2 1 1 1.00 0.25 TPTE^ENSG00000274391.5 16057 chr21:10578605:+ BAGE2^ENSG00000187172.15 42170 chr21:10498857:+ ONLY_REF_SPLICE NO 56 121 0.05 0.02 GT 1.7056 AG 1.9329 0.0127 1192 0
TPTE--BAGE2 1 0 1.00 0.00 TPTE^ENSG00000274391.5 3309 chr21:10527412:+ BAGE2^ENSG00000187172.15 38047 chr21:10485618:+ ONLY_REF_SPLICE YES 87 253 0.02 0.01 GT 1.9656 AG 1.8295 0.0102 3133 0
TPTE--BAGE2 1 0 1.00 0.00 TPTE^ENSG00000274391.5 4363 chr21:10538734:+ BAGE2^ENSG00000187172.15 38047 chr21:10485618:+ ONLY_REF_SPLICE YES 147 253 0.01 0.01 GT 1.7465 AG 1.8295 0.0102 2559 0
TPTE--BAGE2 1 0 1.00 0.00 TPTE^ENSG00000274391.5 5417 chr21:10541165:+ BAGE2^ENSG00000187172.15 45067 chr21:10514122:+ ONLY_REF_SPLICE YES 180 74 0.01 0.03 GT 1.8062 AG 1.7819 0.0102 7719 0
CHD6--PTPRT 4 0 4.00 0.00 CHD6^ENSG00000124177.16 43855 chr20:41412144:- PTPRT^ENSG00000196090.12 71035 chr20:42199388:- ONLY_REF_SPLICE YES 63 2 0.08 1.67 GT 1.7465 AG 1.7819 0.0407 2171 0
CHD6--PTPRT 2 0 2.00 0.00 CHD6^ENSG00000124177.16 43855 chr20:41412144:- PTPRT^ENSG00000196090.12 69996 chr20:42236258:- ONLY_REF_SPLICE YES 63 2 0.05 1.00 GT 1.7465 AG 1.8323 0.0203 1925 0
OR2M3--OR2M4 4 0 4.00 0.00 OR2M3^ENSG00000228198.3 1037 chr1:248197301:+ OR2M4^ENSG00000171180.3 16098 chr1:248238910:+ ONLY_REF_SPLICE YES 0 55 5.00 0.09 GT 1.7819 AG 1.7968 0.0407 849 0
CSNK1G2--KLF16 3 0 3.00 0.00 CSNK1G2^ENSG00000133275.16 6732 chr19:1969959:+ KLF16^ENSG00000129911.9 16617 chr19:1854760:- ONLY_REF_SPLICE YES 567 416 0.01 0.01 GT 1.8323 AG 1.9329 0.0305 338 0
PHF3--SCAT8 3 0 3.00 0.00 PHF3^ENSG00000118482.12 18039 chr6:63706876:+ SCAT8^ENSG00000236345.1 41758 chr6:63821240:+ ONLY_REF_SPLICE YES 206 0 0.02 4.00 GT 1.8892 AG 1.7819 0.0305 913 0
ROS1--GOPC 3 0 3.00 0.00 ROS1^ENSG00000047936.11 44766 chr6:117308794:- GOPC^ENSG00000047932.14 58547 chr6:117569736:- ONLY_REF_SPLICE YES 465 521 0.01 0.01 GT 1.8295 AG 1.7056 0.0305 2824 0
ROS1--GOPC 1 0 1.00 0.00 ROS1^ENSG00000047936.11 45930 chr6:117300974:- GOPC^ENSG00000047932.14 54085 chr6:117577471:- ONLY_REF_SPLICE YES 194 261 0.01 0.01 GT 1.8062 AG 1.5656 0.0102 2357 0
CALR--MRPL4 2 0 2.00 0.00 CALR^ENSG00000179218.15 3077 chr19:12940654:+ MRPL4^ENSG00000105364.14 8921 chr19:10252146:+ ONLY_REF_SPLICE YES 1012 53 0.00 0.06 GT 1.8892 AG 1.5329 0.0203 367 0
CALR--MRPL4 2 0 2.00 0.00 CALR^ENSG00000179218.15 3077 chr19:12940654:+ MRPL4^ENSG00000105364.14 9172 chr19:10252397:+ ONLY_REF_SPLICE YES 1012 550 0.00 0.01 GT 1.8892 AG 1.8256 0.0203 342 0
CREB5--SCG5 2 0 2.00 0.00 CREB5^ENSG00000146592.17 17516 chr7:28724332:+ SCG5^ENSG00000166922.8 40431 chr15:32679766:+ ONLY_REF_SPLICE YES 512 1489 0.01 0.00 GT 1.8295 AG 1.8892 0.0203 2772 0
ENTPD4--PHYHIP 2 0 1.00 0.00 ENTPD4^ENSG00000197217.13 18809 chr8:23403954:- PHYHIP^ENSG00000168490.14 26069 chr8:22228386:- ONLY_REF_SPLICE YES 1 3 1.50 0.75 GT 1.8323 AG 1.7819 0.0102 192 0
LOXL2--PHYHIP 2 0 1.00 0.00 LOXL2^ENSG00000134013.16 2551 chr8:23403954:- PHYHIP^ENSG00000168490.14 29046 chr8:22228386:- ONLY_REF_SPLICE YES 519 3 0.01 0.75 GT 1.8323 AG 1.7819 0.0102 192 0
LRSAM1--USP20 2 0 2.00 0.00 LRSAM1^ENSG00000148356.15 11648 chr9:127467830:+ USP20^ENSG00000136878.14 38469 chr9:129852540:+ ONLY_REF_SPLICE YES 360 152 0.01 0.02 GT 1.9899 AG 1.7819 0.0203 1101 0
LRSAM1--USP20 1 0 1.00 0.00 LRSAM1^ENSG00000148356.15 10557 chr9:127462373:+ USP20^ENSG00000136878.14 38469 chr9:129852540:+ ONLY_REF_SPLICE YES 305 152 0.01 0.01 GT 1.9656 AG 1.7819 0.0102 1660 0
SYNJ2--UTRN 2 0 2.00 0.00 SYNJ2^ENSG00000078269.15 5634 chr6:158029026:+ UTRN^ENSG00000152818.18 73455 chr6:144487548:+ ONLY_REF_SPLICE YES 714 177 0.00 0.02 GT 1.8323 AG 1.8295 0.0203 1165 0
TTC7A--AC007881.2 1 1 1.00 1.00 TTC7A^ENSG00000068724.17 3623 chr2:46941725:+ AC007881.2^ENSG00000236469.1 37387 chr2:71005035:- ONLY_REF_SPLICE YES 284 0 0.01 3.00 GT 1.8295 AG 1.8256 0.0204 5725 0
68 rows