#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
FGFR3--TACC3	2256	6	2256.00	5.99	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	TACC3^ENSG00000013810.20	27590	chr4:1739702:+	ONLY_REF_SPLICE	YES	67	1687	33.28	1.34	GT	1.8892	AG	1.7819	22.9964	627	0
FGFR3--TACC3	5	6	5.00	0.01	FGFR3^ENSG00000068078.20	9880	chr4:1806936:+	TACC3^ENSG00000013810.20	27593	chr4:1739705:+	INCL_NON_REF_SPLICE	YES	7	1719	1.50	0.01	GA	1.8892	TA	1.5219	0.0509	623	0
TMPRSS2--ERG	1424	0	1424.00	0.00	TMPRSS2^ENSG00000184012.14	4652	chr21:41508081:-	ERG^ENSG00000157554.19	28751	chr21:38584945:-	ONLY_REF_SPLICE	YES	4	65	285.00	21.59	GT	1.6895	AG	1.9219	14.477	1104	0
LMNA--NTRK1	704	12	704.00	11.96	LMNA^ENSG00000160789.23	17733	chr1:156130773:+	NTRK1^ENSG00000198400.13	40289	chr1:156874906:+	ONLY_REF_SPLICE	YES	2351	243	0.30	2.94	GT	1.7465	AG	1.5058	7.2788	947	0
LMNA--NTRK1	3	9	3.00	0.04	LMNA^ENSG00000160789.23	17734	chr1:156130774:+	NTRK1^ENSG00000198400.13	40292	chr1:156874909:+	INCL_NON_REF_SPLICE	YES	2351	271	0.01	0.05	TG	1.7465	TC	1.4566	0.0309	949	0
FGFR3--BAIAP2L1	638	2	638.00	2.00	FGFR3^ENSG00000068078.20	9878	chr4:1806934:+	BAIAP2L1^ENSG00000006453.14	16927	chr7:98362432:-	ONLY_REF_SPLICE	YES	69	22	9.16	27.87	GT	1.8892	AG	1.8062	6.5065	1171	0
ETV6--NTRK3	614	2	614.00	2.00	ETV6^ENSG00000139083.11	11237	chr12:11869969:+	NTRK3^ENSG00000140538.16	46238	chr15:87940753:-	ONLY_REF_SPLICE	YES	1966	13	0.31	44.07	GT	1.7819	AG	1.9656	6.2625	1252	0
TPM3--NTRK1	533	4	533.00	4.00	TPM3^ENSG00000143549.21	13389	chr1:154170400:-	NTRK1^ENSG00000198400.13	42070	chr1:156874571:+	ONLY_REF_SPLICE	YES	5275	27	0.10	19.21	GT	1.9329	AG	1.6895	5.4594	355	0
KIF5B--RET	517	6	517.00	6.00	KIF5B^ENSG00000170759.11	19977	chr10:32017143:-	RET^ENSG00000165731.20	38832	chr10:43114480:+	ONLY_REF_SPLICE	YES	979	13	0.53	37.43	GT	1.9656	AG	1.9656	5.3171	3178	0
NCOA4--RET	443	3	443.00	3.00	NCOA4^ENSG00000266412.6	9075	chr10:46012883:-	RET^ENSG00000165731.20	30127	chr10:43116584:+	ONLY_REF_SPLICE	YES	1859	355	0.24	1.26	GT	1.9086	AG	1.8323	4.5342	5144	0
CD74--ROS1	428	5	428.00	5.00	CD74^ENSG00000019582.16	4990	chr5:150404680:-	ROS1^ENSG00000047936.11	48731	chr6:117324415:-	ONLY_REF_SPLICE	YES	23747	38	0.02	11.13	GT	1.7819	AG	1.7465	4.402	2407	0
CCDC6--RET	406	2	406.00	2.00	CCDC6^ENSG00000108091.11	1435	chr10:59906122:-	RET^ENSG00000165731.20	31587	chr10:43116584:+	ONLY_REF_SPLICE	YES	1306	355	0.31	1.15	GT	1.8892	AG	1.8323	4.1479	2092	0
SLC34A2--ROS1	403	13	403.00	13.00	SLC34A2^ENSG00000157765.13	6084	chr4:25664330:+	ROS1^ENSG00000047936.11	58025	chr6:117324415:-	ONLY_REF_SPLICE	YES	0	39	417.00	10.43	GT	1.8892	AG	1.7465	4.2293	999	0
EML4--ALK	314	0	314.00	0.00	EML4^ENSG00000143924.19	17400	chr2:42295516:+	ALK^ENSG00000171094.18	59003	chr2:29223528:-	ONLY_REF_SPLICE	YES	425	32	0.74	9.55	GT	1.6895	AG	1.9086	3.1923	1550	0
PAX8--PPARG	258	1	258.00	1.00	PAX8^ENSG00000125618.18	9714	chr2:113235394:-	PPARG^ENSG00000132170.23	31404	chr3:12379704:+	ONLY_REF_SPLICE	YES	70	6	3.66	37.14	GT	1.8295	AG	1.9329	2.6331	1923	0
SLC45A3--BRAF	210	0	210.00	0.00	SLC45A3^ENSG00000158715.6	1116	chr1:205680394:-	BRAF^ENSG00000157764.14	25172	chr7:140794467:-	ONLY_REF_SPLICE	YES	0	1040	211.00	0.20	GT	1.5628	AG	1.7465	2.135	2599	0
TFG--NTRK1	207	3	207.00	3.00	TFG^ENSG00000114354.15	9135	chr3:100732672:+	NTRK1^ENSG00000198400.13	37655	chr1:156874571:+	ONLY_REF_SPLICE	YES	1339	27	0.16	7.54	GT	1.9329	AG	1.6895	2.135	883	0
EGFR--SEPTIN14	197	0	197.00	0.00	EGFR^ENSG00000146648.19	30734	chr7:55200413:+	SEPTIN14^ENSG00000154997.9	54769	chr7:55796092:-	ONLY_REF_SPLICE	YES	6	3	28.29	49.50	GT	1.8892	AG	1.9899	2.0028	658	0
RAB11FIP3--CYTH1	2	0	2.00	0.00	RAB11FIP3^ENSG00000090565.17	7872	chr16:489000:+	CYTH1^ENSG00000108669.16	29214	chr17:78709732:-	ONLY_REF_SPLICE	YES	284	795	0.01	0.00	GT	1.7968	AG	1.9656	0.0203	2605	0
MOSPD2--MAD1L1	1	0	1.00	0.00	MOSPD2^ENSG00000130150.12	1338	chrX:14873758:+	MAD1L1^ENSG00000002822.16	56714	chr7:1898390:-	ONLY_REF_SPLICE	YES	57	767	0.03	0.00	GT	1.9329	AG	1.7056	0.0102	4114	0