NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (MCF7_FFPE_RNA_0001_B23LG7FLT4_2) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (MCF7_FFPE_RNA_0001_B23LG7FLT4_2)

Login

Task Info

Status: succeeded
Hash: 22a9a482a4d2
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: MCF7_FFPE_RNA_0001_B23LG7FLT4_2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 08/6d86c2
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/6d86c225373d94e3e38e4b72a318f4
Native ID: nf-086d86c225373d94e3e38e4b72a318f4-7af74

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.2 GB / 82.0 GB
Process I/O (rchar / wchar): 17.8 GB / 10.1 GB
Disk I/O (read / write): - / 10.1 GB
Host: i-0dca97e1774903edc ( spot)

Runtime

Submitted: Feb 26, 2026 10:57:19 PM
Completed: Feb 26, 2026 11:12:30 PM
Total Duration: 15m 10s

Phases

Queue: 3s
Execution: 14m 16s
Stage/Unstage: 51s

Attempt 1

Execution

Status: succeeded
Hash: 9b/6b852c
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9b/6b852cbcd3560141cc9c0dcd0b8c62
Native ID: nf-9b6b852cbcd3560141cc9c0dcd0b8c62-6ccdc

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.4 GB / 82.0 GB
Process I/O (rchar / wchar): 17.7 GB / 10.1 GB
Disk I/O (read / write): 867.6 MB / 10.1 GB
Host: i-0dca97e1774903edc ( spot)

Runtime

Submitted: Feb 26, 2026 10:03:25 PM
Completed: Feb 26, 2026 10:19:53 PM
Total Duration: 16m 27s

Phases

Queue: 3s
Execution: 15m 30s
Stage/Unstage: 54s