NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (FFPE_V4_0001_RNA_0001_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (FFPE_V4_0001_RNA_0001_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: 4915e32abf3d
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: FFPE_V4_0001_RNA_0001_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 3c/f59a5b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/f59a5b874b8129dcd959c2cf70322b
Native ID: nf-3cf59a5b874b8129dcd959c2cf70322b-c44be

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.7 GB / 82.0 GB
Process I/O (rchar / wchar): 17.5 GB / 10.0 GB
Disk I/O (read / write): - / 10.0 GB
Host: i-002c45397afcdcba9 ( spot)

Runtime

Submitted: Feb 27, 2026 12:02:19 AM
Completed: Feb 27, 2026 12:17:48 AM
Total Duration: 15m 28s

Phases

Queue: 2s
Execution: 14m 30s
Stage/Unstage: 56s

Attempt 1

Execution

Status: succeeded
Hash: c7/5a5310
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c7/5a53100bc59283c095259f6bf2a3cc
Native ID: nf-c75a53100bc59283c095259f6bf2a3cc-cc14d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.6 GB / 82.0 GB
Process I/O (rchar / wchar): 17.5 GB / 10.0 GB
Disk I/O (read / write): - / 10.0 GB
Host: i-0e53b64db067f9eae ( spot)

Runtime

Submitted: Feb 26, 2026 10:50:15 PM
Completed: Feb 26, 2026 11:07:20 PM
Total Duration: 17m 4s

Phases

Queue: 19s
Execution: 15m 52s
Stage/Unstage: 53s