NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_SORT_FOR_ARRIBA (786-O_FFPE_RNA_0001_B23LG7FLT4_2) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
SAMTOOLS_SORT_FOR_ARRIBA (786-O_FFPE_RNA_0001_B23LG7FLT4_2)

Login

Task Info

Status: succeeded
Hash: 5234a14f35e3
Process: NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_SORT_FOR_ARRIBA
Tag: 786-O_FFPE_RNA_0001_B23LG7FLT4_2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 62/7ba5da
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/samtools:1.17--h00cdaf9_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/62/7ba5dad28630939832a11cf86f8bd9
Native ID: nf-627ba5dad28630939832a11cf86f8bd9-b2af5

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.1 / 4
Memory (peak / alloc): 3.4 GB / 15.0 GB
Process I/O (rchar / wchar): 73.6 GB / 15.2 GB
Disk I/O (read / write): 73.1 GB / 15.2 GB
Host: i-015b0bde257ce614c ( spot)

Runtime

Submitted: Feb 26, 2026 9:11:15 PM
Completed: Feb 26, 2026 9:29:31 PM
Total Duration: 18m 15s

Phases

Queue: 1m 20s
Execution: 8m 45s
Stage/Unstage: 8m 10s

Attempt 1

Execution

Status: succeeded - cached
Hash: 57/11a0ed
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/samtools:1.17--h00cdaf9_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/11a0ed9a4d49930d8ae97deb589f0d
Native ID: nf-5711a0ed9a4d49930d8ae97deb589f0d-7ba4b

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.1 / 4
Memory (peak / alloc): 3.4 GB / 15.0 GB
Process I/O (rchar / wchar): 77.0 GB / 16.0 GB
Disk I/O (read / write): 76.4 GB / 16.0 GB
Host: i-0256c2e42e41cd672 ( spot)

Runtime

Submitted: Feb 26, 2026 9:08:56 PM
Completed: Feb 26, 2026 9:28:06 PM
Total Duration: 19m 9s

Phases

Queue: 1m 35s
Execution: 9m 16s
Stage/Unstage: 8m 18s