NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
AGAT_CONVERTSPGFF2TSV (SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1)

Login

Task Info

Status: succeeded
Hash: 528ae7b8fe1f
Process: NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV
Tag: SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: c3/970e4f
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/agat:1.2.0--pl5321hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/970e4fa1c53c99fb3620a54a7e9506
Native ID: nf-c3970e4fa1c53c99fb3620a54a7e9506-26349

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 260.6 MB / 6.0 GB
Process I/O (rchar / wchar): 76.1 MB / 15.2 MB
Disk I/O (read / write): - / 15.0 MB
Host: i-0dcc5d1a89fc4d145 ( spot)

Runtime

Submitted: Feb 27, 2026 12:39:39 AM
Completed: Feb 27, 2026 12:39:59 AM
Total Duration: 19s

Phases

Queue: 3s
Execution: 14s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 72/ec9474
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/agat:1.2.0--pl5321hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/ec94745e4881318718ab4f0d262554
Native ID: nf-72ec94745e4881318718ab4f0d262554-62d76

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 537.6 MB / 6.0 GB
Process I/O (rchar / wchar): 164.2 MB / 33.7 MB
Disk I/O (read / write): 12.0 KB / 33.2 MB
Host: i-0dcc5d1a89fc4d145 ( spot)

Runtime

Submitted: Feb 27, 2026 12:02:34 AM
Completed: Feb 27, 2026 12:03:10 AM
Total Duration: 35s

Phases

Queue: 4s
Execution: 29s
Stage/Unstage: 2s