NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (786-O_FFPE_RNA_0001_B23LG7FLT4_2) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (786-O_FFPE_RNA_0001_B23LG7FLT4_2)

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Task Info

Status: succeeded
Hash: 6cdebea9ed82
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 786-O_FFPE_RNA_0001_B23LG7FLT4_2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: af/3d2609
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/3d2609f548a334869b389731babf0d
Native ID: nf-af3d2609f548a334869b389731babf0d-03f99

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 57.2 GB / 82.0 GB
Process I/O (rchar / wchar): 17.4 GB / 9.9 GB
Disk I/O (read / write): - / 9.9 GB
Host: i-01b8b1c117c808231 ( spot)

Runtime

Submitted: Feb 26, 2026 10:47:59 PM
Completed: Feb 26, 2026 11:03:46 PM
Total Duration: 15m 46s

Phases

Queue: 13s
Execution: 14m 41s
Stage/Unstage: 52s

Attempt 1

Execution

Status: succeeded
Hash: e9/5e0ba1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e9/5e0ba1514f252fe3f2c37a46805e13
Native ID: nf-e95e0ba1514f252fe3f2c37a46805e13-fb802

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 57.1 GB / 82.0 GB
Process I/O (rchar / wchar): 17.8 GB / 10.1 GB
Disk I/O (read / write): 1.7 GB / 10.1 GB
Host: i-038b10353e6e822c9 ( spot)

Runtime

Submitted: Feb 26, 2026 9:51:45 PM
Completed: Feb 26, 2026 10:11:31 PM
Total Duration: 19m 45s

Phases

Queue: 47s
Execution: 17m 59s
Stage/Unstage: 59s