NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (Hs746T_FFPE_RNA_0001_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (Hs746T_FFPE_RNA_0001_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: 74ee20e1bd20
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: Hs746T_FFPE_RNA_0001_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 0f/cf284a
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0f/cf284ac1e9e67fd1038b776936e10e
Native ID: nf-0fcf284ac1e9e67fd1038b776936e10e-b4877

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.8 GB / 82.0 GB
Process I/O (rchar / wchar): 17.5 GB / 10.0 GB
Disk I/O (read / write): 539.8 MB / 10.0 GB
Host: i-0c9a09e79f6778944 ( spot)

Runtime

Submitted: Feb 26, 2026 11:00:39 PM
Completed: Feb 26, 2026 11:16:29 PM
Total Duration: 15m 49s

Phases

Queue: 2s
Execution: 14m 54s
Stage/Unstage: 53s

Attempt 1

Execution

Status: succeeded
Hash: 75/3a1a0d
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/75/3a1a0d7c9a096a5caefc37ea25e9b1
Native ID: nf-753a1a0d7c9a096a5caefc37ea25e9b1-c5d68

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.5 GB / 82.0 GB
Process I/O (rchar / wchar): 17.5 GB / 10.0 GB
Disk I/O (read / write): - / 10.0 GB
Host: i-0172212d5df133966 ( spot)

Runtime

Submitted: Feb 26, 2026 10:06:05 PM
Completed: Feb 26, 2026 10:21:26 PM
Total Duration: 15m 20s

Phases

Queue: 3s
Execution: 14m 23s
Stage/Unstage: 54s