NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (KG1_FFPE_01_RNA_0003_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (KG1_FFPE_01_RNA_0003_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: 7b27f12158f7
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: KG1_FFPE_01_RNA_0003_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 0d/f0fc72
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0d/f0fc72787695c468a35fbd34d35d78
Native ID: nf-0df0fc72787695c468a35fbd34d35d78-8931e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.4 GB / 82.0 GB
Process I/O (rchar / wchar): 17.7 GB / 10.0 GB
Disk I/O (read / write): 32.0 KB / 10.0 GB
Host: i-0ddb569638dae4b4e ( spot)

Runtime

Submitted: Feb 26, 2026 10:35:29 PM
Completed: Feb 26, 2026 10:51:13 PM
Total Duration: 15m 43s

Phases

Queue: 2s
Execution: 14m 51s
Stage/Unstage: 50s

Attempt 1

Execution

Status: succeeded
Hash: 8e/62f155
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8e/62f15561626e5a587a43305f18b494
Native ID: nf-8e62f15561626e5a587a43305f18b494-f30a7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.9 GB / 82.0 GB
Process I/O (rchar / wchar): 17.7 GB / 10.1 GB
Disk I/O (read / write): - / 10.1 GB
Host: i-036e1ea9804d28522 ( spot)

Runtime

Submitted: Feb 26, 2026 9:38:15 PM
Completed: Feb 26, 2026 9:53:51 PM
Total Duration: 15m 35s

Phases

Queue: 16s
Execution: 14m 28s
Stage/Unstage: 51s