NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (786-O_FFPE_RNA_0001_B23LG7FLT4_3) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (786-O_FFPE_RNA_0001_B23LG7FLT4_3)

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Task Info

Status: succeeded
Hash: 7c0a9fa0fab1
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 786-O_FFPE_RNA_0001_B23LG7FLT4_3
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 52/f5b7ed
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/f5b7ed9dc222e33053f5d2d75b8a1d
Native ID: nf-52f5b7ed9dc222e33053f5d2d75b8a1d-b1aed

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 57.1 GB / 82.0 GB
Process I/O (rchar / wchar): 17.6 GB / 10.0 GB
Disk I/O (read / write): - / 10.0 GB
Host: i-0c8460d185ec36f3b ( spot)

Runtime

Submitted: Feb 26, 2026 10:48:59 PM
Completed: Feb 26, 2026 11:04:11 PM
Total Duration: 15m 11s

Phases

Queue: 15s
Execution: 14m 5s
Stage/Unstage: 51s

Attempt 1

Execution

Status: succeeded
Hash: 50/685413
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/50/685413cb5234f49d55e2abd63abb6e
Native ID: nf-50685413cb5234f49d55e2abd63abb6e-c5af7

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 57.0 GB / 82.0 GB
Process I/O (rchar / wchar): 17.9 GB / 10.2 GB
Disk I/O (read / write): - / 10.2 GB
Host: i-036e1ea9804d28522 ( spot)

Runtime

Submitted: Feb 26, 2026 9:54:35 PM
Completed: Feb 26, 2026 10:11:05 PM
Total Duration: 16m 29s

Phases

Queue: 2s
Execution: 15m 33s
Stage/Unstage: 54s