NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_SORT_FOR_ARRIBA (SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
SAMTOOLS_SORT_FOR_ARRIBA (SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3)

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Task Info

Status: succeeded
Hash: 7e685033a74a
Process: NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_SORT_FOR_ARRIBA
Tag: SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 5a/9dd395
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/samtools:1.17--h00cdaf9_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5a/9dd39547c530185df018df0166fe99
Native ID: nf-5a9dd39547c530185df018df0166fe99-e7249

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.1 / 4
Memory (peak / alloc): 3.4 GB / 15.0 GB
Process I/O (rchar / wchar): 77.1 GB / 15.9 GB
Disk I/O (read / write): 76.5 GB / 15.9 GB
Host: i-0e799947230687cd8 ( spot)

Runtime

Submitted: Feb 26, 2026 9:16:45 PM
Completed: Feb 26, 2026 9:34:22 PM
Total Duration: 17m 36s

Phases

Queue: 7s
Execution: 9m 18s
Stage/Unstage: 8m 11s

Attempt 1

Execution

Status: succeeded - cached
Hash: de/8318f6
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/samtools:1.17--h00cdaf9_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/de/8318f65747ec341bf986570f53b8fe
Native ID: nf-de8318f65747ec341bf986570f53b8fe-54eea

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.9 / 4
Memory (peak / alloc): 3.5 GB / 15.0 GB
Process I/O (rchar / wchar): 5.8 GB / 1.1 GB
Disk I/O (read / write): - / 1.1 GB
Host: i-0db31725549bab128 ( spot)

Runtime

Submitted: Feb 26, 2026 2:59:43 PM
Completed: Feb 26, 2026 3:00:56 PM
Total Duration: 1m 12s

Phases

Queue: 4s
Execution: 35s
Stage/Unstage: 33s