NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (SW780_FFPE_RNA_0001_B23LG7FLT4_2) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
AGAT_CONVERTSPGFF2TSV (SW780_FFPE_RNA_0001_B23LG7FLT4_2)

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Task Info

Status: succeeded
Hash: 926e56fba214
Process: NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV
Tag: SW780_FFPE_RNA_0001_B23LG7FLT4_2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: b9/4c9b14
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/agat:1.2.0--pl5321hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b9/4c9b14f77e24aa47507c2864742a99
Native ID: nf-b94c9b14f77e24aa47507c2864742a99-1388c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 291.8 MB / 6.0 GB
Process I/O (rchar / wchar): 82.8 MB / 16.6 MB
Disk I/O (read / write): - / 16.3 MB
Host: i-0933634edde8a15cf ( spot)

Runtime

Submitted: Feb 27, 2026 12:19:09 AM
Completed: Feb 27, 2026 12:19:26 AM
Total Duration: 16s

Phases

Queue: 3s
Execution: 12s
Stage/Unstage: 1s

Attempt 1

Execution

Status: succeeded
Hash: 4d/6089ba
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/agat:1.2.0--pl5321hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/6089ba4ee95d167c6c6970e64b5402
Native ID: nf-4d6089ba4ee95d167c6c6970e64b5402-d9953

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 284.8 MB / 6.0 GB
Process I/O (rchar / wchar): 81.9 MB / 15.4 MB
Disk I/O (read / write): - / 15.1 MB
Host: i-055c6fd2a9d96e6db ( spot)

Runtime

Submitted: Feb 26, 2026 11:38:55 PM
Completed: Feb 26, 2026 11:39:17 PM
Total Duration: 21s

Phases

Queue: 3s
Execution: 16s
Stage/Unstage: 2s