NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (MCF7_FFPE_RNA_0001_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (MCF7_FFPE_RNA_0001_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: 9906f220c7a4
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: MCF7_FFPE_RNA_0001_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 57/5a51c8
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/5a51c879852bfbaa737a47fd93a399
Native ID: nf-575a51c879852bfbaa737a47fd93a399-c8fdc

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.2 GB / 82.0 GB
Process I/O (rchar / wchar): 18.0 GB / 10.2 GB
Disk I/O (read / write): - / 10.2 GB
Host: i-06899d65e64f9ef63 ( spot)

Runtime

Submitted: Feb 26, 2026 10:57:29 PM
Completed: Feb 26, 2026 11:13:00 PM
Total Duration: 15m 30s

Phases

Queue: 18s
Execution: 14m 21s
Stage/Unstage: 51s

Attempt 1

Execution

Status: succeeded
Hash: b3/330ef8
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/330ef80dac7e3b5a0a5b94f002841a
Native ID: nf-b3330ef80dac7e3b5a0a5b94f002841a-4cc03

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.9 GB / 82.0 GB
Process I/O (rchar / wchar): 17.8 GB / 10.1 GB
Disk I/O (read / write): 5.3 GB / 10.1 GB
Host: i-036e1ea9804d28522 ( spot)

Runtime

Submitted: Feb 26, 2026 10:04:35 PM
Completed: Feb 26, 2026 10:20:49 PM
Total Duration: 16m 13s

Phases

Queue: 3s
Execution: 15m 17s
Stage/Unstage: 53s