NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (Hs746T_FFPE_RNA_0001_B23LG7FLT4_2) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (Hs746T_FFPE_RNA_0001_B23LG7FLT4_2)

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Task Info

Status: succeeded
Hash: 9ae51c945fe9
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: Hs746T_FFPE_RNA_0001_B23LG7FLT4_2
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 77/b54095
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/77/b54095ee53f00f9e35be6f67c7f06b
Native ID: nf-77b54095ee53f00f9e35be6f67c7f06b-ee32a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.8 GB / 82.0 GB
Process I/O (rchar / wchar): 17.3 GB / 9.9 GB
Disk I/O (read / write): - / 9.9 GB
Host: i-002c45397afcdcba9 ( spot)

Runtime

Submitted: Feb 26, 2026 10:39:19 PM
Completed: Feb 26, 2026 10:54:56 PM
Total Duration: 15m 36s

Phases

Queue: 9s
Execution: 14m 35s
Stage/Unstage: 52s

Attempt 1

Execution

Status: succeeded
Hash: 99/afa616
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/99/afa616693dd7d683ee36915534ca13
Native ID: nf-99afa616693dd7d683ee36915534ca13-17780

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 57.1 GB / 82.0 GB
Process I/O (rchar / wchar): 17.4 GB / 9.9 GB
Disk I/O (read / write): 2.5 GB / 9.9 GB
Host: i-0849d071876139868 ( spot)

Runtime

Submitted: Feb 26, 2026 9:42:34 PM
Completed: Feb 26, 2026 9:58:16 PM
Total Duration: 15m 41s

Phases

Queue: 2s
Execution: 14m 47s
Stage/Unstage: 52s