NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (786-O_FFPE_RNA_0001_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (786-O_FFPE_RNA_0001_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: a16c86e93fcc
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: 786-O_FFPE_RNA_0001_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 6b/6a3e78
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6b/6a3e78659315a5caa9b6b0a4209d57
Native ID: nf-6b6a3e78659315a5caa9b6b0a4209d57-afb9d

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.5 GB / 82.0 GB
Process I/O (rchar / wchar): 17.7 GB / 10.0 GB
Disk I/O (read / write): 1.1 GB / 10.0 GB
Host: i-01b8b1c117c808231 ( spot)

Runtime

Submitted: Feb 26, 2026 10:32:49 PM
Completed: Feb 26, 2026 10:48:08 PM
Total Duration: 15m 18s

Phases

Queue: 20s
Execution: 14m 8s
Stage/Unstage: 50s

Attempt 1

Execution

Status: succeeded
Hash: df/b33ef2
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/df/b33ef2fc85bdd0cf835c34ab479760
Native ID: nf-dfb33ef2fc85bdd0cf835c34ab479760-2915c

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 57.2 GB / 82.0 GB
Process I/O (rchar / wchar): 17.6 GB / 10.0 GB
Disk I/O (read / write): - / 10.0 GB
Host: i-06e1b1051ef572f28 ( spot)

Runtime

Submitted: Feb 26, 2026 9:32:45 PM
Completed: Feb 26, 2026 9:48:12 PM
Total Duration: 15m 26s

Phases

Queue: 15s
Execution: 14m 21s
Stage/Unstage: 50s