NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (FFPE_HD789_01_RNA_0002_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (FFPE_HD789_01_RNA_0002_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: ce96f16f0fad
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: FFPE_HD789_01_RNA_0002_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 49/af582e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/af582e19deac87bb74084b8230c6aa
Native ID: nf-49af582e19deac87bb74084b8230c6aa-d6136

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.5 GB / 82.0 GB
Process I/O (rchar / wchar): 17.7 GB / 10.1 GB
Disk I/O (read / write): - / 10.1 GB
Host: i-0d779bfbe9fb29e48 ( spot)

Runtime

Submitted: Feb 26, 2026 11:03:39 PM
Completed: Feb 26, 2026 11:19:21 PM
Total Duration: 15m 41s

Phases

Queue: 2s
Execution: 14m 48s
Stage/Unstage: 51s

Attempt 1

Execution

Status: succeeded
Hash: c6/e0ac2e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c6/e0ac2eb8a1a0c0ca3f97da91360f96
Native ID: nf-c6e0ac2eb8a1a0c0ca3f97da91360f96-79648

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 57.1 GB / 82.0 GB
Process I/O (rchar / wchar): 17.1 GB / 9.7 GB
Disk I/O (read / write): - / 9.7 GB
Host: i-08bba56d95bf171c0 ( spot)

Runtime

Submitted: Feb 26, 2026 10:07:25 PM
Completed: Feb 26, 2026 10:22:33 PM
Total Duration: 15m 7s

Phases

Queue: 2s
Execution: 14m 11s
Stage/Unstage: 54s