NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (SW780_FFPE_RNA_0001_B23LG7FLT4_3) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
AGAT_CONVERTSPGFF2TSV (SW780_FFPE_RNA_0001_B23LG7FLT4_3)

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Task Info

Status: succeeded
Hash: dd467e0e3561
Process: NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV
Tag: SW780_FFPE_RNA_0001_B23LG7FLT4_3
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 4b/5a62d1
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/agat:1.2.0--pl5321hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4b/5a62d1c797f830ede262253a242b84
Native ID: nf-4b5a62d1c797f830ede262253a242b84-dfe6f

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 302.7 MB / 6.0 GB
Process I/O (rchar / wchar): 85.0 MB / 17.6 MB
Disk I/O (read / write): - / 17.4 MB
Host: i-0933634edde8a15cf ( spot)

Runtime

Submitted: Feb 26, 2026 11:58:59 PM
Completed: Feb 26, 2026 11:59:26 PM
Total Duration: 26s

Phases

Queue: 12s
Execution: 12s
Stage/Unstage: 2s

Attempt 1

Execution

Status: succeeded
Hash: 33/5a127e
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/agat:1.2.0--pl5321hdfd78af_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/33/5a127eed6a0e308c504944b6c4f8dd
Native ID: nf-335a127eed6a0e308c504944b6c4f8dd-15919

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.0 / 1
Memory (peak / alloc): 302.4 MB / 6.0 GB
Process I/O (rchar / wchar): 85.0 MB / 17.6 MB
Disk I/O (read / write): - / 17.4 MB
Host: i-0c9a09e79f6778944 ( spot)

Runtime

Submitted: Feb 26, 2026 10:59:15 PM
Completed: Feb 26, 2026 10:59:41 PM
Total Duration: 25s

Phases

Queue: 11s
Execution: 12s
Stage/Unstage: 2s