NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (A673_FFPE_RNA_0001_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
GATK4_MARKDUPLICATES (A673_FFPE_RNA_0001_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: dde08e49058d
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: A673_FFPE_RNA_0001_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 21/6ae65b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/21/6ae65bd3cfdbc3332614a269e02d30
Native ID: nf-216ae65bd3cfdbc3332614a269e02d30-01460

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 56.3 GB / 82.0 GB
Process I/O (rchar / wchar): 17.3 GB / 9.8 GB
Disk I/O (read / write): - / 9.8 GB
Host: i-0d779bfbe9fb29e48 ( spot)

Runtime

Submitted: Feb 26, 2026 10:46:59 PM
Completed: Feb 26, 2026 11:02:29 PM
Total Duration: 15m 29s

Phases

Queue: 4s
Execution: 14m 32s
Stage/Unstage: 53s

Attempt 1

Execution

Status: succeeded
Hash: 7b/15a4fb
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/15a4fb8a1b202be7fb03e50cdeef5b
Native ID: nf-7b15a4fb8a1b202be7fb03e50cdeef5b-850bf

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.6 / 8
Memory (peak / alloc): 57.3 GB / 82.0 GB
Process I/O (rchar / wchar): 17.5 GB / 10.0 GB
Disk I/O (read / write): - / 10.0 GB
Host: i-0c8460d185ec36f3b ( spot)

Runtime

Submitted: Feb 26, 2026 9:50:35 PM
Completed: Feb 26, 2026 10:05:53 PM
Total Duration: 15m 17s

Phases

Queue: 2s
Execution: 14m 25s
Stage/Unstage: 50s