NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_SORT_FOR_ARRIBA (SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1) - dev_rna_exp0008_1bb6229e - Workflow Tracker

Runs
dev_rna_exp0008_1bb6229e
Tasks
SAMTOOLS_SORT_FOR_ARRIBA (SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1)

Login

Task Info

Status: succeeded
Hash: ee500a9b7400
Process: NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_SORT_FOR_ARRIBA
Tag: SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 56/e97f1b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/samtools:1.17--h00cdaf9_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/56/e97f1bf32ef0243c9c91665fbe0e06
Native ID: nf-56e97f1bf32ef0243c9c91665fbe0e06-85107

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 4.1 / 4
Memory (peak / alloc): 3.4 GB / 15.0 GB
Process I/O (rchar / wchar): 76.4 GB / 15.6 GB
Disk I/O (read / write): 76.0 GB / 15.6 GB
Host: i-0e8d700086f23b0d7 ( spot)

Runtime

Submitted: Feb 26, 2026 9:16:05 PM
Completed: Feb 26, 2026 9:35:26 PM
Total Duration: 19m 20s

Phases

Queue: 1m 32s
Execution: 9m 23s
Stage/Unstage: 8m 25s

Attempt 1

Execution

Status: succeeded - cached
Hash: 52/d7a7d2
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/samtools:1.17--h00cdaf9_0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/d7a7d23f6aab9dc6b700abf257f4e0
Native ID: nf-52d7a7d23f6aab9dc6b700abf257f4e0-04f86

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 3.7 / 4
Memory (peak / alloc): 3.4 GB / 15.0 GB
Process I/O (rchar / wchar): 73.6 GB / 15.4 GB
Disk I/O (read / write): 73.2 GB / 15.4 GB
Host: i-0ec6d3f4f83f57259 ( spot)

Runtime

Submitted: Feb 26, 2026 9:00:35 PM
Completed: Feb 26, 2026 9:18:51 PM
Total Duration: 18m 15s

Phases

Queue: 1m 13s
Execution: 9m 6s
Stage/Unstage: 7m 56s