File Info
- Filename
- OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008/B23LG7FLT4/nfcore_rnafusion__2cae617--20260515-145204/starfusion/OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1.starfusion.starfusion.fusion_predictions.tsv
- Size
- 45.1 KB
- Workflow Run
- dev_rna_exp0008_2cae617
- Published
- May 16, 2026 1:55 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | SpliceType | LeftGene | LeftBreakpoint | RightGene | RightBreakpoint | JunctionReads | SpanningFrags | LargeAnchorSupport | FFPM | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | annots |
| TM2D1--FGGY | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | TM2D1^ENSG00000162604.12 | chr1:61724902:- | FGGY^ENSG00000172456.18 | chr1:59321536:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1255:20958:10038,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2293:34347:16021,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1311:30084:10626 | . | NO_LDAS | 0.2462 | GT | 1.7232 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr1:1.87Mb]"] |
| ZNF233--ZNF384 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF233^ENSG00000159915.12 | chr19:44273574:+ | ZNF384^ENSG00000126746.17 | chr12:6667938:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1254:37009:7488,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1476:39007:24989 | . | NO_LDAS | 0.1642 | GT | 1.9219 | AG | 1.5850 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr12]"] |
| TMC4--IGH@-ext | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | TMC4^ENSG00000167608.12 | chr19:54168416:- | IGH@-ext^IGH.g@-ext | chr14:106719406:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2206:25375:1406,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2284:30051:11103 | . | NO_LDAS | 0.1642 | CC | 1.7819 | TT | 1.2419 | ["INTERCHROMOSOMAL[chr19--chr14]"] |
| SAMD14--IGH@-ext | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | SAMD14^ENSG00000167100.15 | chr17:50129845:- | IGH@-ext^IGH.g@-ext | chr14:106419212:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2202:17916:12000,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2170:9365:7558 | . | YES_LDAS | 0.1642 | GT | 0.9968 | CT | 0.9968 | ["INTERCHROMOSOMAL[chr17--chr14]"] |
| NFATC4--AC012236.1 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NFATC4^ENSG00000100968.14 | chr14:24369769:+ | AC012236.1^ENSG00000259772.6 | chr15:31222222:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1157:42566:20141,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2263:50948:27119 | . | NO_LDAS | 0.0821 | GC | 1.3383 | AG | 1.5058 | ["INTERCHROMOSOMAL[chr14--chr15]"] |
| LAMA2--CCDC192 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | LAMA2^ENSG00000196569.13 | chr6:128883357:+ | CCDC192^ENSG00000230561.5 | chr5:127739843:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1279:37259:14200,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2239:21500:13667 | . | NO_LDAS | 0.1642 | GT | 1.7465 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr6--chr5]"] |
| IGL@-ext--KCNMA1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22584967:+ | KCNMA1^ENSG00000156113.24 | chr10:77637488:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2214:50430:6829,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2377:36782:20491 | . | YES_LDAS | 0.1642 | TC | 0.8366 | TT | 0.9710 | ["INTERCHROMOSOMAL[chr22--chr10]"] |
| IGH-@-ext--OSGIN1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | IGH-@-ext^IGH-.g@-ext | chr14:105679159:+ | OSGIN1^ENSG00000140961.14 | chr16:83960739:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1103:48294:18543,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1152:30901:12014 | . | NO_LDAS | 0.1642 | GG | 1.4566 | AA | 1.5628 | ["INTERCHROMOSOMAL[chr14--chr16]"] |
| HYMAI--XKR7 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | HYMAI^ENSG00000283122.1 | chr6:144007283:- | XKR7^ENSG00000260903.3 | chr20:31968676:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1376:13612:17016,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2208:9859:8020 | . | NO_LDAS | 0.1642 | GT | 1.3753 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr6--chr20]"] |
| GTF2E2--MAP3K4 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | GTF2E2^ENSG00000197265.9 | chr8:30658137:- | MAP3K4^ENSG00000085511.20 | chr6:160992004:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1151:27737:4909,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1183:3613:19566 | . | NO_LDAS | 0.1642 | GT | 1.2419 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr8--chr6]"] |
| CELF5--PKN1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | CELF5^ENSG00000161082.13 | chr19:3275872:+ | PKN1^ENSG00000123143.13 | chr19:14443562:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1193:48763:7502,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1183:50859:20771 | . | NO_LDAS | 0.1642 | GT | 1.9656 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr19:11.14Mb]"] |
| B3GALT4--MAP3K9 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | B3GALT4^ENSG00000235863.4 | chr6:33277156:+ | MAP3K9^ENSG00000006432.16 | chr14:70809081:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2203:38101:1869,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2197:24105:12406 | . | NO_LDAS | 0.1642 | GT | 1.0530 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr6--chr14]"] |
| AC004943.2--DUSP9 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | AC004943.2^ENSG00000259768.6 | chr16:72787758:+ | DUSP9^ENSG00000130829.18 | chrX:153647287:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1183:38788:13793,&OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1264:10182:22173 | . | NO_LDAS | 0.1642 | GT | 0.9183 | AG | 1.3753 | ["INTERCHROMOSOMAL[chr16--chrX]"] |
| ZNF713--ZXDC | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF713^ENSG00000178665.16 | chr7:55887638:+ | ZXDC^ENSG00000070476.15 | chr3:126475664:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1457:31475:26404 | . | NO_LDAS | 0.0821 | GT | 0.9183 | AG | 1.5656 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr7--chr3]"] |
| ZNF707--AC136475.7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF707^ENSG00000181135.16 | chr8:143684574:+ | AC136475.7^ENSG00000270972.1 | chr11:333319:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2365:19105:8286 | . | NO_LDAS | 0.0821 | GT | 0.9056 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr8--chr11]"] |
| ZNF106--MT-RNR1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF106^ENSG00000103994.18 | chr15:42444827:- | MT-RNR1^ENSG00000211459.2 | chrM:1432:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1415:35949:1981 | . | NO_LDAS | 0.0821 | GT | 1.9329 | AG | 1.6729 | ["INTERCHROMOSOMAL[chr15--chrM]"] |
| Z95114.1--LRP10 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | Z95114.1^ENSG00000279217.1 | chr22:36074848:+ | LRP10^ENSG00000197324.9 | chr14:22873246:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1249:19639:7558 | . | NO_LDAS | 0.0821 | GT | 1.0530 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr22--chr14]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105773085:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105745514:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105745209:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105745130:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105744972:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105744893:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105744814:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105628125:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| XRCC3--IGH@-ext | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | XRCC3^ENSG00000126215.14 | chr14:103698823:- | IGH@-ext^IGH.g@-ext | chr14:105627891:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2342:9058:8875 | . | NO_LDAS | 0.0082 | GA | 1.5546 | CA | 1.0389 | ["INTRACHROMOSOMAL[chr14:1.87Mb]"] |
| TYMP--AC060834.1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TYMP^ENSG00000025708.14 | chr22:50526576:- | AC060834.1^ENSG00000197320.5 | chr7:9726246:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2142:16727:4671 | . | NO_LDAS | 0.041 | GT | 1.8892 | AG | 1.5058 | ["INTERCHROMOSOMAL[chr22--chr7]"] |
| TXNDC15--TOM1L2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TXNDC15^ENSG00000113621.15 | chr5:134874530:+ | TOM1L2^ENSG00000175662.18 | chr17:17907531:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1286:1218:18754 | . | YES_LDAS | 0.0821 | GT | 1.6402 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr5--chr17]"] |
| TSPOAP1--AC006449.5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TSPOAP1^ENSG00000005379.17 | chr17:58305061:- | AC006449.5^ENSG00000277182.1 | chr17:38749406:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2333:20780:16596 | . | NO_LDAS | 0.0821 | GT | 1.8892 | AG | 1.2729 | ["INTRACHROMOSOMAL[chr17:19.55Mb]"] |
| TPR--AKAP7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TPR^ENSG00000047410.14 | chr1:186325767:- | AKAP7^ENSG00000118507.17 | chr6:131200903:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1389:2036:2401 | . | NO_LDAS | 0.0821 | GT | 1.8062 | AG | 1.5850 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| TPBG--RXRB | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TPBG^ENSG00000146242.9 | chr6:82365098:+ | RXRB^ENSG00000204231.11 | chr6:33200337:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2129:41628:10725 | . | NO_LDAS | 0.041 | GT | 1.3710 | AG | 0.9183 | ["INTRACHROMOSOMAL[chr6:49.16Mb]"] |
| TPBG--MAPRE2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TPBG^ENSG00000146242.9 | chr6:82365098:+ | MAPRE2^ENSG00000166974.13 | chr18:34976949:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2129:41628:10725 | . | NO_LDAS | 0.041 | GT | 1.3710 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr6--chr18]"] |
| TMED2--TRHDE-AS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMED2^ENSG00000086598.11 | chr12:123584604:+ | TRHDE-AS1^ENSG00000236333.4 | chr12:72271670:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2443:14073:21822 | . | NO_LDAS | 0.0821 | GT | 1.7968 | AG | 1.9086 | ["INTRACHROMOSOMAL[chr12:51.31Mb]"] |
| TLK1--AC018638.8 | 1 | 0 | 0.14 | 0.00 | INCL_NON_REF_SPLICE | TLK1^ENSG00000198586.14 | chr2:171050064:- | AC018638.8^ENSG00000281896.1 | chr7:128617868:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1357:26896:7992 | . | NO_LDAS | 0.0115 | GT | 1.8323 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr7]"] |
| THOC7-AS1--ZNF19 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | THOC7-AS1^ENSG00000240549.2 | chr3:63860922:+ | ZNF19^ENSG00000157429.16 | chr16:71467066:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2449:20246:1743 | . | NO_LDAS | 0.0821 | GT | 1.4295 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr3--chr16]"] |
| TEX261--CPEB4 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | TEX261^ENSG00000144043.12 | chr2:70994825:- | CPEB4^ENSG00000113742.14 | chr5:173888409:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2224:38675:18557 | . | YES_LDAS | 0.0271 | GT | 1.3383 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr2--chr5]"] |
| TCF4--KRT1 | 1 | 0 | 0.14 | 0.00 | INCL_NON_REF_SPLICE | TCF4^ENSG00000196628.20 | chr18:55588101:- | KRT1^ENSG00000167768.4 | chr12:52675500:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2270:21969:2794 | . | NO_LDAS | 0.0115 | GT | 1.1589 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr18--chr12]"] |
| TBC1D26--NKX6-2 | 1 | 0 | 0.14 | 0.00 | INCL_NON_REF_SPLICE | TBC1D26^ENSG00000214946.14 | chr17:15742965:+ | NKX6-2^ENSG00000148826.9 | chr10:132785972:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1357:1235:25199 | . | NO_LDAS | 0.0115 | GT | 1.5546 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr17--chr10]"] |
| TBC1D26--AC142086.6 | 1 | 0 | 0.14 | 0.00 | INCL_NON_REF_SPLICE | TBC1D26^ENSG00000214946.14 | chr17:15742965:+ | AC142086.6^ENSG00000277304.1 | chr16:32925519:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1357:1235:25199 | . | NO_LDAS | 0.0115 | GT | 1.5546 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr17--chr16]"] |
| TAF9P1--R3HDM2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TAF9P1^ENSG00000226353.1 | chrY:17628936:+ | R3HDM2^ENSG00000179912.20 | chr12:57299455:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2287:46077:8791 | . | NO_LDAS | 0.041 | GT | 1.7968 | AG | 1.9086 | ["INTERCHROMOSOMAL[chrY--chr12]"] |
| SYNE2--SPATA33 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | SYNE2^ENSG00000054654.19 | chr14:64216359:+ | SPATA33^ENSG00000167523.14 | chr16:89660188:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1445:12286:24050 | . | NO_LDAS | 0.041 | GT | 1.6402 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr14--chr16]"] |
| SYNE2--PIM3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | SYNE2^ENSG00000054654.19 | chr14:64216359:+ | PIM3^ENSG00000198355.5 | chr22:49962698:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1445:12286:24050 | . | NO_LDAS | 0.041 | GT | 1.6402 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr14--chr22]"] |
| SLC30A4--MICALL2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SLC30A4^ENSG00000104154.7 | chr15:45522633:- | MICALL2^ENSG00000164877.19 | chr7:1441245:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2122:8030:15615 | . | NO_LDAS | 0.0821 | GT | 1.3753 | AG | 1.3753 | ["INTERCHROMOSOMAL[chr15--chr7]"] |
| SLC28A1--GPATCH8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SLC28A1^ENSG00000156222.12 | chr15:84884714:+ | GPATCH8^ENSG00000186566.13 | chr17:44398080:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1328:6914:12728 | . | NO_LDAS | 0.0821 | GT | 1.5628 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr15--chr17]"] |
| SLC1A2--ABCA10 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SLC1A2^ENSG00000110436.13 | chr11:35322980:- | ABCA10^ENSG00000154263.17 | chr17:69192653:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2455:6420:12882 | . | NO_LDAS | 0.0821 | GT | 1.8892 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr11--chr17]"] |
| SIK3--BSND | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | SIK3^ENSG00000160584.16 | chr11:117098271:- | BSND^ENSG00000162399.9 | chr1:55007003:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1140:41685:10654 | . | NO_LDAS | 0.0205 | GT | 1.2729 | AG | 1.6049 | ["INTERCHROMOSOMAL[chr11--chr1]"] |
| SIK1--MAP1A | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | SIK1^ENSG00000142178.9 | chr21:43417046:- | MAP1A^ENSG00000166963.13 | chr15:43530230:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2470:33756:21780 | . | NO_LDAS | 0.041 | GT | 1.1589 | AG | 1.0530 | ["INTERCHROMOSOMAL[chr21--chr15]"] |
| SAMD14--IGH@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SAMD14^ENSG00000167100.15 | chr17:50129845:- | IGH@-ext^IGH.g@-ext | chr14:106419206:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2144:39832:5792 | . | YES_LDAS | 0.0821 | GT | 0.9968 | CT | 0.9968 | ["INTERCHROMOSOMAL[chr17--chr14]"] |
| RPTOR--AC073347.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPTOR^ENSG00000141564.15 | chr17:80966126:+ | AC073347.1^ENSG00000230936.1 | chr7:55343672:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1289:20254:18235 | . | NO_LDAS | 0.0821 | GC | 1.3753 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr17--chr7]"] |
| RPL11--RRM2B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL11^ENSG00000142676.14 | chr1:23692763:+ | RRM2B^ENSG00000048392.12 | chr8:102206461:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2248:44921:5946 | . | NO_LDAS | 0.0821 | GT | 1.9329 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr1--chr8]"] |
| RNU4-49P--RNU4-8P | 1 | 0 | 0.04 | 0.00 | INCL_NON_REF_SPLICE | RNU4-49P^ENSG00000251889.1 | chr2:48340783:- | RNU4-8P^ENSG00000201806.1 | chr2:97664685:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1244:25828:27245 | . | NO_LDAS | 0.0033 | GT | 1.8062 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr2:49.32Mb]"] |
| RNH1--BTBD7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RNH1^ENSG00000023191.17 | chr11:504432:- | BTBD7^ENSG00000011114.15 | chr14:93332955:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1284:10481:11397 | . | NO_LDAS | 0.0821 | GT | 1.3996 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr11--chr14]"] |
| RN7SL417P--RN7SL752P | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RN7SL417P^ENSG00000244056.3 | chr15:84394176:+ | RN7SL752P^ENSG00000239437.3 | chr3:129591475:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1320:26168:5526 | . | NO_LDAS | 0.0821 | GT | 1.9656 | AG | 1.9656 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr15--chr3]"] |
| RN7SKP297--RN7SKP87 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | RN7SKP297^ENSG00000223202.1 | chr11:74685331:+ | RN7SKP87^ENSG00000200966.1 | chr9:100581300:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2195:29477:17002 | . | NO_LDAS | 0.0205 | GT | 1.3710 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr11--chr9]"] |
| RIPK4--VEZF1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RIPK4^ENSG00000183421.12 | chr21:41746707:- | VEZF1^ENSG00000136451.9 | chr17:57988225:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1101:24712:14578 | . | NO_LDAS | 0.0821 | GT | 1.4716 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr21--chr17]"] |
| REPS2--AL590822.3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | REPS2^ENSG00000169891.18 | chrX:16947083:+ | AL590822.3^ENSG00000287356.1 | chr1:2315151:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1116:50284:6185 | . | NO_LDAS | 0.0821 | GT | 0.9710 | AG | 1.1033 | ["INTERCHROMOSOMAL[chrX--chr1]"] |
| RDX--AL391832.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RDX^ENSG00000137710.17 | chr11:110230582:- | AL391832.2^ENSG00000238005.4 | chr1:234961958:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1310:44921:8441 | . | NO_LDAS | 0.0821 | GT | 0.9968 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr11--chr1]"] |
| RBMY2AP--RBMX | 1 | 0 | 0.25 | 0.00 | ONLY_REF_SPLICE | RBMY2AP^ENSG00000226092.4 | chrY:21936485:- | RBMX^ENSG00000147274.14 | chrX:136878086:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:1205:46846:7123 | . | NO_LDAS | 0.0205 | GT | 1.5058 | AG | 1.7465 | ["INTERCHROMOSOMAL[chrY--chrX]"] |
| RBM14--RBM4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | RBM4^ENSG00000173933.21 | chr11:66639700:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:1112:6801:7067 | . | YES_LDAS | 0.0821 | GT | 1.7465 | AG | 1.9086 | ["HGNC_GENEFAM","Greger_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[8733]"] |
| RAB11FIP5--IGL-@-ext | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | RAB11FIP5^ENSG00000135631.17 | chr2:73081482:- | IGL-@-ext^IGL-.g@-ext | chr22:22474257:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1270:3484:11888 | . | NO_LDAS | 0.041 | CC | 1.2419 | GC | 1.2419 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| PRRT3-AS1--LRATD1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PRRT3-AS1^ENSG00000230082.1 | chr3:9948469:+ | LRATD1^ENSG00000162981.14 | chr2:14649316:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2344:47566:15573 | . | YES_LDAS | 0.0821 | GT | 1.9656 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr3--chr2]"] |
| PPP1R18--ABHD2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PPP1R18^ENSG00000146112.12 | chr6:30685021:- | ABHD2^ENSG00000140526.18 | chr15:89201854:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1378:38667:28072 | . | NO_LDAS | 0.041 | AT | 1.5628 | AC | 1.4716 | ["INTERCHROMOSOMAL[chr6--chr15]"] |
| PILRB--INHBA | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PILRB^ENSG00000121716.20 | chr7:100359537:+ | INHBA^ENSG00000122641.11 | chr7:41705601:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1474:37365:7320 | . | NO_LDAS | 0.041 | GT | 0.9968 | AG | 1.4716 | ["INTRACHROMOSOMAL[chr7:58.65Mb]"] |
| PCYT1B--SP3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PCYT1B^ENSG00000102230.14 | chrX:24647266:- | SP3^ENSG00000172845.17 | chr2:173964501:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2445:8176:14886 | . | NO_LDAS | 0.0821 | GT | 1.0530 | AG | 1.1589 | ["INTERCHROMOSOMAL[chrX--chr2]"] |
| PCMTD1--IGL@-ext | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PCMTD1^ENSG00000168300.14 | chr8:51818410:- | IGL@-ext^IGL.g@-ext | chr22:22690244:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2174:10579:22831 | . | NO_LDAS | 0.041 | GG | 0.0000 | GC | 1.7968 | ["INTERCHROMOSOMAL[chr8--chr22]"] |
| PABPN1P2--DSCAM | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PABPN1P2^ENSG00000255875.2 | chr19:52809847:+ | DSCAM^ENSG00000171587.15 | chr21:40846801:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1144:32567:2205 | . | NO_LDAS | 0.041 | GT | 1.2419 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr19--chr21]"] |
| OST4--KDM2B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | OST4^ENSG00000228474.6 | chr2:27071503:- | KDM2B^ENSG00000089094.19 | chr12:121442491:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:1172:35277:29739 | . | NO_LDAS | 0.0821 | GT | 1.7232 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr2--chr12]"] |
| NME3--NME2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NME3^ENSG00000103024.7 | chr16:1771070:- | NME2^ENSG00000243678.12 | chr17:51169937:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1320:42639:12672 | . | NO_LDAS | 0.0821 | GT | 1.7465 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr16--chr17]"] |
| NKX1-2--JADE3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | NKX1-2^ENSG00000229544.9 | chr10:124449957:- | JADE3^ENSG00000102221.14 | chrX:46912460:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1420:12925:6969 | . | NO_LDAS | 0.041 | GT | 1.2310 | AG | 0.8366 | ["INTERCHROMOSOMAL[chr10--chrX]"] |
| NISCH--IGH-@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NISCH^ENSG00000010322.16 | chr3:52489609:+ | IGH-@-ext^IGH-.g@-ext | chr14:106844932:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2409:32235:13093 | . | NO_LDAS | 0.0821 | TC | 1.5301 | CG | 1.8892 | ["INTERCHROMOSOMAL[chr3--chr14]"] |
| NISCH--CDK6 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | NISCH^ENSG00000010322.16 | chr3:52487670:+ | CDK6^ENSG00000105810.10 | chr7:92613606:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1284:4964:23083 | . | NO_LDAS | 0.041 | GC | 1.8295 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr3--chr7]"] |
| NF1--MINDY4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NF1^ENSG00000196712.18 | chr17:31357090:+ | MINDY4^ENSG00000106125.14 | chr7:30782133:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1368:42413:21080 | . | NO_LDAS | 0.0821 | GT | 1.6402 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr17--chr7]"] |
| NAXD--NR5A1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NAXD^ENSG00000213995.12 | chr13:110616059:+ | NR5A1^ENSG00000136931.10 | chr9:124507425:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1182:40253:20057 | . | NO_LDAS | 0.0821 | GT | 1.4566 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr13--chr9]"] |
| MVK--PDK2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MVK^ENSG00000110921.14 | chr12:109595181:+ | PDK2^ENSG00000005882.12 | chr17:50106614:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1163:44435:17436 | . | NO_LDAS | 0.0821 | GT | 1.7968 | AG | 1.6049 | ["INTERCHROMOSOMAL[chr12--chr17]"] |
| MRPS25--CEBPA | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MRPS25^ENSG00000131368.8 | chr3:15059369:- | CEBPA^ENSG00000245848.3 | chr19:33300919:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1337:13612:25143 | . | NO_LDAS | 0.0821 | GT | 1.9219 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr3--chr19]"] |
| MMP24OS--TMEM150B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MMP24OS^ENSG00000126005.17 | chr20:35277852:- | TMEM150B^ENSG00000180061.10 | chr19:55322696:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1156:27115:10528 | . | NO_LDAS | 0.0821 | GC | 1.6402 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr20--chr19]"] |
| MED13--MARK2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | MED13^ENSG00000108510.10 | chr17:62032349:- | MARK2^ENSG00000072518.22 | chr11:63902198:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1455:31758:5624 | . | NO_LDAS | 0.0821 | GT | 1.9329 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr17--chr11]"] |
| MECP2--PWWP2A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MECP2^ENSG00000169057.24 | chrX:154097016:- | PWWP2A^ENSG00000170234.13 | chr5:160119316:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1225:47914:17801 | . | NO_LDAS | 0.0821 | GC | 1.0389 | AG | 1.7819 | ["INTERCHROMOSOMAL[chrX--chr5]"] |
| MACF1--SHISAL2B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MACF1^ENSG00000127603.30 | chr1:39287526:+ | SHISAL2B^ENSG00000145642.12 | chr5:64690512:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1297:18442:4615 | . | NO_LDAS | 0.0821 | GT | 1.9656 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr1--chr5]"] |
| LINC01772--MTRNR2L4 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | LINC01772^ENSG00000226029.1 | chr1:16461701:+ | MTRNR2L4^ENSG00000232196.4 | chr16:3372070:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1486:26111:13695 | . | NO_LDAS | 0.041 | GT | 0.5665 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr1--chr16]"] |
| ITGA2B--HEBP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ITGA2B^ENSG00000005961.19 | chr17:44384408:- | HEBP2^ENSG00000051620.11 | chr6:138405971:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1151:44848:11481 | . | NO_LDAS | 0.0821 | GT | 1.3996 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr17--chr6]"] |
| INSYN2A--IGH-@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | INSYN2A^ENSG00000188916.9 | chr10:127196271:- | IGH-@-ext^IGH-.g@-ext | chr14:105600437:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2422:31095:4783 | . | NO_LDAS | 0.0821 | AA | 1.3996 | CT | 1.1589 | ["INTERCHROMOSOMAL[chr10--chr14]"] |
| IGL@-ext--RPS6KA3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22474257:+ | RPS6KA3^ENSG00000177189.14 | chrX:20267079:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1270:3484:11888 | . | NO_LDAS | 0.041 | GC | 1.2419 | CG | 1.2419 | ["INTERCHROMOSOMAL[chr22--chrX]"] |
| IGL@-ext--PLPP6 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22474257:+ | PLPP6^ENSG00000205808.7 | chr9:4662462:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1436:14518:11327 | . | NO_LDAS | 0.0271 | GC | 1.2419 | CA | 1.2419 | ["INTERCHROMOSOMAL[chr22--chr9]"] |
| IGL@-ext--BRINP2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22474257:+ | BRINP2^ENSG00000198797.7 | chr1:177171458:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2317:13653:10276 | . | NO_LDAS | 0.041 | GC | 1.2419 | GG | 1.2419 | ["INTERCHROMOSOMAL[chr22--chr1]"] |
| IGH@-ext--RECQL5 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105724119:- | RECQL5^ENSG00000108469.15 | chr17:75627403:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1406:26799:8328 | . | NO_LDAS | 0.0271 | AG | 1.6895 | CA | 1.3996 | ["INTERCHROMOSOMAL[chr14--chr17]"] |
| IGH@-ext--RECQL5 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105605332:- | RECQL5^ENSG00000108469.15 | chr17:75627403:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1406:26799:8328 | . | NO_LDAS | 0.0271 | AG | 1.6895 | CA | 1.3996 | ["INTERCHROMOSOMAL[chr14--chr17]"] |
| IGH-@-ext--RBM15B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IGH-@-ext^IGH-.g@-ext | chr14:106378385:+ | RBM15B^ENSG00000259956.2 | chr3:51392926:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1345:34315:27455 | . | NO_LDAS | 0.0821 | GA | 1.7819 | CA | 1.9656 | ["INTERCHROMOSOMAL[chr14--chr3]"] |
| IGH-@-ext--PIM3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IGH-@-ext^IGH-.g@-ext | chr14:105679159:+ | PIM3^ENSG00000198355.5 | chr22:49962694:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1240:43715:3578 | . | NO_LDAS | 0.0821 | GG | 1.4566 | CC | 1.8892 | ["INTERCHROMOSOMAL[chr14--chr22]"] |
| HS3ST3B1--ZBTB12 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HS3ST3B1^ENSG00000125430.9 | chr17:14301602:+ | ZBTB12^ENSG00000204366.4 | chr6:31902015:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1447:36135:7039 | . | NO_LDAS | 0.0821 | GT | 0.8366 | AG | 0.9056 | ["INTERCHROMOSOMAL[chr17--chr6]"] |
| HNRNPDL--IGF2R | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | HNRNPDL^ENSG00000152795.18 | chr4:82426037:- | IGF2R^ENSG00000197081.16 | chr6:160043148:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1134:40228:7292 | . | YES_LDAS | 0.0821 | GT | 1.7968 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr4--chr6]"] |
| HMGN2--CD4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HMGN2^ENSG00000198830.11 | chr1:26474135:+ | CD4^ENSG00000010610.10 | chr12:6815882:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1253:19219:23560 | . | NO_LDAS | 0.0821 | GT | 1.8256 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr1--chr12]"] |
| HLA-C--NUMA1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269493:- | NUMA1^ENSG00000137497.18 | chr11:72013673:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1190:1809:20421 | . | NO_LDAS | 0.0821 | GT | 1.8256 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr6--chr11]"] |
| GTF2E2--NFE2L2 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | GTF2E2^ENSG00000197265.9 | chr8:30658137:- | NFE2L2^ENSG00000116044.16 | chr2:177264685:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2224:38675:18557 | . | NO_LDAS | 0.0271 | GT | 1.2419 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr8--chr2]"] |
| GREB1--HOOK2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GREB1^ENSG00000196208.14 | chr2:11633028:+ | HOOK2^ENSG00000095066.12 | chr19:12766173:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1186:6339:29081 | . | NO_LDAS | 0.0821 | GT | 1.8892 | AG | 1.6729 | ["INTERCHROMOSOMAL[chr2--chr19]"] |
| GOLPH3--CHKA | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GOLPH3^ENSG00000113384.14 | chr5:32173840:- | CHKA^ENSG00000110721.12 | chr11:68097053:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1379:43707:10935 | . | NO_LDAS | 0.0821 | GT | 1.9086 | AG | 1.5850 | ["INTERCHROMOSOMAL[chr5--chr11]"] |
| FRMD4A--MACF1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FRMD4A^ENSG00000151474.23 | chr10:13660457:- | MACF1^ENSG00000127603.30 | chr1:39158993:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1360:13329:1476 | . | NO_LDAS | 0.0821 | GT | 1.3753 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr10--chr1]"] |
| FOXE1--ZDHHC11 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FOXE1^ENSG00000178919.9 | chr9:97854448:+ | ZDHHC11^ENSG00000188818.12 | chr5:840399:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1353:38748:23756 | . | NO_LDAS | 0.0821 | GC | 0.9183 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr9--chr5]"] |
| FLNB--ADD2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FLNB^ENSG00000136068.15 | chr3:58109283:+ | ADD2^ENSG00000075340.23 | chr2:70675954:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1130:24558:23308 | . | NO_LDAS | 0.0821 | GT | 1.9656 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr3--chr2]"] |
| FLNA--HK2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | FLNA^ENSG00000196924.19 | chrX:154364712:- | HK2^ENSG00000159399.10 | chr2:74874355:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1293:6995:21192 | . | NO_LDAS | 0.041 | GT | 1.8062 | AG | 1.3710 | ["INTERCHROMOSOMAL[chrX--chr2]"] |
| FAM193B--SPANXA1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | FAM193B^ENSG00000146067.16 | chr5:177554489:- | SPANXA1^ENSG00000198021.7 | chrX:141584988:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2170:16557:25311 | . | NO_LDAS | 0.041 | GT | 1.2310 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr5--chrX]"] |
| FAM193B--CDH4 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | FAM193B^ENSG00000146067.16 | chr5:177554489:- | CDH4^ENSG00000179242.16 | chr20:61252404:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2380:21985:4839 | . | NO_LDAS | 0.041 | GT | 1.2310 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr5--chr20]"] |
| FAM120B--H2AZ2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FAM120B^ENSG00000112584.14 | chr6:170290722:+ | H2AZ2^ENSG00000105968.19 | chr7:44848043:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1164:22147:7838 | . | NO_LDAS | 0.0821 | GT | 1.3996 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr6--chr7]"] |
| ETNK1--SPATA33 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ETNK1^ENSG00000139163.16 | chr12:22659340:+ | SPATA33^ENSG00000167523.14 | chr16:89660188:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1240:13362:26026 | . | NO_LDAS | 0.041 | GT | 1.3383 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr12--chr16]"] |
| ETNK1--PIM3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ETNK1^ENSG00000139163.16 | chr12:22659340:+ | PIM3^ENSG00000198355.5 | chr22:49962698:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1240:13362:26026 | . | NO_LDAS | 0.041 | GT | 1.3383 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr12--chr22]"] |
| EPS8--TCP10L3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EPS8^ENSG00000151491.14 | chr12:15631584:- | TCP10L3^ENSG00000203690.13 | chr6:167357748:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2122:27932:13793 | . | NO_LDAS | 0.0821 | GT | 1.6895 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr12--chr6]"] |
| EPS8--OPRL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EPS8^ENSG00000151491.14 | chr12:15631584:- | OPRL1^ENSG00000125510.18 | chr20:64092727:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1196:42939:23868 | . | NO_LDAS | 0.0821 | GT | 1.6895 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr12--chr20]"] |
| EMX2--CASKIN1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | EMX2^ENSG00000170370.12 | chr10:117543445:+ | CASKIN1^ENSG00000167971.16 | chr16:2179067:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1232:8880:7586 | . | NO_LDAS | 0.041 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr10--chr16]"] |
| EIF3C--TENT4B | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | EIF3C^ENSG00000184110.15 | chr16:28727245:+ | TENT4B^ENSG00000121274.14 | chr16:50223373:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1170:41935:13891 | . | NO_LDAS | 0.041 | GT | 1.7819 | AG | 1.8256 | ["INTRACHROMOSOMAL[chr16:21.42Mb]"] |
| EIF1AX--METAP1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | EIF1AX^ENSG00000173674.11 | chrX:20141625:- | METAP1^ENSG00000164024.12 | chr4:99034241:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2241:13175:13681 | . | NO_LDAS | 0.041 | GT | 1.8295 | AG | 1.6895 | ["INTERCHROMOSOMAL[chrX--chr4]"] |
| EEF1G--CASP8AP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EEF1G^ENSG00000254772.10 | chr11:62567407:- | CASP8AP2^ENSG00000118412.13 | chr6:89829904:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1293:22358:12518 | . | NO_LDAS | 0.0821 | GT | 1.9086 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr11--chr6]"] |
| DYNC1H1--GAPDHP14 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | DYNC1H1^ENSG00000197102.13 | chr14:102016017:+ | GAPDHP14^ENSG00000236056.1 | chr21:29222366:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1480:8880:28744 | . | NO_LDAS | 0.0271 | GT | 1.7465 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr14--chr21]"] |
| DST--ATRNL1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | DST^ENSG00000151914.21 | chr6:56843055:- | ATRNL1^ENSG00000107518.18 | chr10:115215697:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2466:28142:29515 | . | YES_LDAS | 0.0821 | GT | 1.7056 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr6--chr10]"] |
| DNAL4--SSH1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DNAL4^ENSG00000100246.13 | chr22:38779188:- | SSH1^ENSG00000084112.15 | chr12:108787836:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1363:21686:27890 | . | NO_LDAS | 0.0821 | GT | 1.0530 | AG | 1.6729 | ["INTERCHROMOSOMAL[chr22--chr12]"] |
| DDX51--MAPRE2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DDX51^ENSG00000185163.10 | chr12:132144072:- | MAPRE2^ENSG00000166974.13 | chr18:34976949:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1205:28457:21766 | . | YES_LDAS | 0.0821 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr12--chr18]"] |
| CYBC1--SLC38A8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CYBC1^ENSG00000178927.18 | chr17:82448954:- | SLC38A8^ENSG00000166558.11 | chr16:84016628:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1404:35269:15741 | . | NO_LDAS | 0.0821 | AT | 1.8323 | AC | 1.9329 | ["INTERCHROMOSOMAL[chr17--chr16]"] |
| CTDSP2--IGL@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CTDSP2^ENSG00000175215.11 | chr12:57829536:- | IGL@-ext^IGL.g@-ext | chr22:22563645:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1353:33797:18347 | . | NO_LDAS | 0.0821 | CT | 1.8323 | AC | 1.3383 | ["INTERCHROMOSOMAL[chr12--chr22]"] |
| CREBL2--PLA2G6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CREBL2^ENSG00000111269.3 | chr12:12612187:+ | PLA2G6^ENSG00000184381.20 | chr22:38132087:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1118:14737:27343 | . | YES_LDAS | 0.0821 | GT | 1.7819 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr12--chr22]"] |
| CREBL2--LINC01496 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CREBL2^ENSG00000111269.3 | chr12:12612187:+ | LINC01496^ENSG00000234766.2 | chrX:51499708:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2180:51522:21780 | . | YES_LDAS | 0.0821 | GT | 1.7819 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr12--chrX]"] |
| CPSF6--GLP1R | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | CPSF6^ENSG00000111605.18 | chr12:69262566:+ | GLP1R^ENSG00000112164.6 | chr6:39088358:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2393:44524:18712 | . | NO_LDAS | 0.041 | GT | 1.8062 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr12--chr6]"] |
| CPSF6--FMO2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | CPSF6^ENSG00000111605.18 | chr12:69262566:+ | FMO2^ENSG00000094963.14 | chr1:171212557:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2393:44524:18712 | . | NO_LDAS | 0.041 | GT | 1.8062 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr12--chr1]"] |
| COL6A1--TNFRSF14-AS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL6A1^ENSG00000142156.15 | chr21:45992398:+ | TNFRSF14-AS1^ENSG00000238164.6 | chr1:2555325:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1489:20230:18838 | . | NO_LDAS | 0.0821 | GT | 1.2729 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr21--chr1]"] |
| COL6A1--PTPN5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL6A1^ENSG00000142156.15 | chr21:45992810:+ | PTPN5^ENSG00000110786.18 | chr11:18765880:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:1183:50050:3396 | . | NO_LDAS | 0.0821 | GT | 1.8256 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr21--chr11]"] |
| COL6A1--AL590438.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL6A1^ENSG00000142156.15 | chr21:46000362:+ | AL590438.1^ENSG00000272235.1 | chr1:3307881:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1160:42963:14382 | . | NO_LDAS | 0.0821 | GT | 1.7465 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr21--chr1]"] |
| COL4A6--ZNF384 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL4A6^ENSG00000197565.16 | chrX:108178684:- | ZNF384^ENSG00000126746.17 | chr12:6667935:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2325:46296:5246 | . | NO_LDAS | 0.0821 | GT | 1.9219 | AG | 1.5850 | ["INTERCHROMOSOMAL[chrX--chr12]"] |
| COL3A1--IGL@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL3A1^ENSG00000168542.16 | chr2:188984962:+ | IGL@-ext^IGL.g@-ext | chr22:22598486:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1346:46563:7810 | . | NO_LDAS | 0.0821 | GT | 1.8295 | CT | 1.5329 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| COL18A1--MON1A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL18A1^ENSG00000182871.16 | chr21:45505966:+ | MON1A^ENSG00000164077.14 | chr3:49910417:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2286:8046:19062 | . | NO_LDAS | 0.0821 | GT | 1.9656 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr21--chr3]"] |
| CHN1--LARP1B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CHN1^ENSG00000128656.15 | chr2:175005263:- | LARP1B^ENSG00000138709.19 | chr4:128062003:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1409:8872:10318 | . | NO_LDAS | 0.0821 | GT | 1.1589 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr2--chr4]"] |
| CELSR1--MKNK2 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | CELSR1^ENSG00000075275.18 | chr22:46537150:- | MKNK2^ENSG00000099875.16 | chr19:2038611:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2459:47833:2331 | . | NO_LDAS | 0.0164 | GT | 0.8366 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr22--chr19]"] |
| CDC37L1--NPEPPS | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | CDC37L1^ENSG00000106993.12 | chr9:4679601:+ | NPEPPS^ENSG00000141279.17 | chr17:47531538:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2373:35391:27049 | . | NO_LDAS | 0.0205 | GT | 1.6895 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr9--chr17]"] |
| CBR4--DLX6 | 1 | 0 | 0.14 | 0.00 | INCL_NON_REF_SPLICE | CBR4^ENSG00000145439.12 | chr4:169009960:- | DLX6^ENSG00000006377.11 | chr7:97006110:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:2440:16808:29753 | . | NO_LDAS | 0.0115 | GT | 1.4566 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr4--chr7]"] |
| CAMTA2--RCBTB1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CAMTA2^ENSG00000108509.21 | chr17:4979385:- | RCBTB1^ENSG00000136144.12 | chr13:49549648:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1246:15093:23980 | . | NO_LDAS | 0.0821 | GT | 1.9329 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr17--chr13]"] |
| C11orf95--FLNA | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | C11orf95^ENSG00000188070.9 | chr11:63763258:- | FLNA^ENSG00000196924.19 | chrX:154362729:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1156:42380:17380 | . | NO_LDAS | 0.0205 | GT | 1.5546 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr11--chrX]"] |
| BTBD6--IGH@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | BTBD6^ENSG00000184887.13 | chr14:105250645:+ | IGH@-ext^IGH.g@-ext | chr14:106173074:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1326:2731:3494 | . | NO_LDAS | 0.0821 | AT | 1.7232 | TC | 1.7465 | ["INTRACHROMOSOMAL[chr14:0.33Mb]"] |
| B3GNT9--IQCE | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | B3GNT9^ENSG00000237172.4 | chr16:67148466:- | IQCE^ENSG00000106012.18 | chr7:2596956:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2406:6161:8370 | . | NO_LDAS | 0.0821 | GT | 1.5301 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr16--chr7]"] |
| AUTS2--HOXD8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AUTS2^ENSG00000158321.18 | chr7:70436643:+ | HOXD8^ENSG00000175879.9 | chr2:176130685:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1226:29275:15363 | . | NO_LDAS | 0.0821 | GT | 1.2419 | AG | 1.1033 | ["INTERCHROMOSOMAL[chr7--chr2]"] |
| ASH1L--IGL-@-ext | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | ASH1L^ENSG00000116539.14 | chr1:155562456:- | IGL-@-ext^IGL-.g@-ext | chr22:22474257:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1436:14518:11327 | . | NO_LDAS | 0.0271 | CT | 1.2419 | GC | 1.2419 | ["INTERCHROMOSOMAL[chr1--chr22]"] |
| ARSJ--CHD6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ARSJ^ENSG00000180801.14 | chr4:113978871:- | CHD6^ENSG00000124177.16 | chr20:41405418:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2319:28983:1350 | . | NO_LDAS | 0.0821 | GT | 1.1589 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr4--chr20]"] |
| ARHGAP17--IGL-@-ext | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | ARHGAP17^ENSG00000140750.17 | chr16:25015261:- | IGL-@-ext^IGL-.g@-ext | chr22:22474257:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1436:14518:11327 | . | NO_LDAS | 0.0271 | TG | 1.2419 | GC | 1.2419 | ["INTERCHROMOSOMAL[chr16--chr22]"] |
| APPL2--MECP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | APPL2^ENSG00000136044.12 | chr12:105207971:- | MECP2^ENSG00000169057.24 | chrX:154025827:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:2114:1995:8160 | . | NO_LDAS | 0.0821 | GT | 1.2729 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr12--chrX]"] |
| ANO3--AL132994.1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | ANO3^ENSG00000134343.14 | chr11:26516885:+ | AL132994.1^ENSG00000258680.2 | chr14:38835466:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2464:25577:3214 | . | NO_LDAS | 0.0271 | GT | 1.9656 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr11--chr14]"] |
| ALOX12-AS1--MUS81 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ALOX12-AS1^ENSG00000215067.10 | chr17:7002484:- | MUS81^ENSG00000172732.12 | chr11:65860225:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1230:8969:19174 | . | YES_LDAS | 0.0821 | GT | 1.9329 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr17--chr11]"] |
| ALG11--FTLP8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ALG11^ENSG00000253710.5 | chr13:52028886:+ | FTLP8^ENSG00000232217.1 | chr13:97987223:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1131:27746:13695 | . | NO_LDAS | 0.0821 | GT | 1.7819 | AG | 1.5058 | ["INTRACHROMOSOMAL[chr13:45.91Mb]"] |
| AL365356.2--RPL23AP42 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL365356.2^ENSG00000228685.1 | chr10:5625040:+ | RPL23AP42^ENSG00000234851.4 | chr3:161429486:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2234:45406:29375 | . | NO_LDAS | 0.0821 | GT | 1.2729 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr10--chr3]"] |
| AL356534.1--SOS2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AL356534.1^ENSG00000286215.1 | chr6:126819392:- | SOS2^ENSG00000100485.12 | chr14:50150230:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1407:43108:24302 | . | NO_LDAS | 0.0821 | GT | 1.9329 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr6--chr14]"] |
| AL162713.1--AC108073.3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL162713.1^ENSG00000270522.1 | chr13:43787787:+ | AC108073.3^ENSG00000286641.1 | chr4:187943695:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1225:9826:11243 | . | NO_LDAS | 0.0821 | AT | 0.9183 | AC | 1.5656 | ["INTERCHROMOSOMAL[chr13--chr4]"] |
| AL139246.5--ZNF587B | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AL139246.5^ENSG00000272449.2 | chr1:2546248:+ | ZNF587B^ENSG00000269343.9 | chr19:57841992:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1118:31265:19847 | . | NO_LDAS | 0.041 | GT | 0.7219 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr1--chr19]"] |
| AL035530.2--SYNE1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL035530.2^ENSG00000271913.7 | chr6:159000211:+ | SYNE1^ENSG00000131018.24 | chr6:152430556:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:6:1386:32203:19594 | . | NO_LDAS | 0.0821 | GT | 1.9219 | AG | 1.9899 | ["INTRACHROMOSOMAL[chr6:6.35Mb]"] |
| AKNA--AP001029.3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AKNA^ENSG00000106948.17 | chr9:114359709:- | AP001029.3^ENSG00000267515.1 | chr18:12451016:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2258:42939:3915 | . | YES_LDAS | 0.0821 | GT | 0.9183 | AG | 0.9710 | ["INTERCHROMOSOMAL[chr9--chr18]"] |
| ADRM1--CAMK2B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ADRM1^ENSG00000130706.13 | chr20:62307452:+ | CAMK2B^ENSG00000058404.20 | chr7:44267024:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2133:51393:29655 | . | NO_LDAS | 0.0821 | GT | 1.7232 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr20--chr7]"] |
| ACOX3--AKAP13 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ACOX3^ENSG00000087008.16 | chr4:8366309:- | AKAP13^ENSG00000170776.22 | chr15:85579691:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:1111:27252:12224 | . | NO_LDAS | 0.0821 | GT | 1.4256 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr4--chr15]"] |
| AC108002.2--DIDO1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC108002.2^ENSG00000277332.1 | chr8:142640507:+ | DIDO1^ENSG00000101191.17 | chr20:62879475:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:1277:13879:22131 | . | NO_LDAS | 0.0821 | GT | 0.9968 | AG | 1.4295 | ["INTERCHROMOSOMAL[chr8--chr20]"] |
| AC093503.1--HELZ | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC093503.1^ENSG00000269292.1 | chr19:46610770:- | HELZ^ENSG00000198265.12 | chr17:67109392:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:2439:35747:15951 | . | NO_LDAS | 0.0821 | GT | 1.9656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr19--chr17]"] |
| AC079921.2--KLHL5 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AC079921.2^ENSG00000249685.1 | chr4:39134045:+ | KLHL5^ENSG00000109790.17 | chr4:39075965:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:7:2312:47348:11467 | . | YES_LDAS | 0.0821 | GT | 1.7232 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr4:0.01Mb]","LOCAL_REARRANGEMENT:+:[7056]"] |
| AC026150.1--GOLGA2P2Y | 1 | 0 | 0.05 | 0.00 | ONLY_REF_SPLICE | AC026150.1^ENSG00000260693.1 | chr15:30544660:+ | GOLGA2P2Y^ENSG00000239533.6 | chrY:24215581:- | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1426:6299:8693 | . | NO_LDAS | 0.0041 | GT | 1.8323 | AG | 1.5058 | ["INTERCHROMOSOMAL[chr15--chrY]"] |
| AC009133.2--CES3 | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | AC009133.2^ENSG00000259952.1 | chr16:29807422:- | CES3^ENSG00000172828.13 | chr16:66973119:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:5:1132:7763:20421 | . | NO_LDAS | 0.014 | GT | 1.5656 | AG | 1.0530 | ["INTRACHROMOSOMAL[chr16:37.15Mb]"] |
| ABL1--IGL@-ext | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ABL1^ENSG00000097007.19 | chr9:130835493:+ | IGL@-ext^IGL.g@-ext | chr22:22824702:+ | &OvarianNP_FFPE_L02_RNA_01_B23LG7FLT4_1@LH00166:238:23LG7FLT4:8:1150:9527:8847 | . | NO_LDAS | 0.0821 | GC | 1.7465 | CC | 1.4295 | ["INTERCHROMOSOMAL[chr9--chr22]"] |
158 rows