FastQCFastQC Report
Tue 3 Mar 2026
A549_FFPE_01_RNA_0001_B23LG7FLT4_3_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameA549_FFPE_01_RNA_0001_B23LG7FLT4_3_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4618078
Total Bases697.3 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC96

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG362951478.59360539168027No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGG564231.2217853401350085No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGG388660.8416055337306991No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGG358290.7758422443276186No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGG204430.44267333726281793No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGG176530.38225859329357365No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGGGGGGGGGGG76240.16509032545574154No Hit
GGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70490.15263925815025212No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGG61330.13280416658185507No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGAGGGGGGGGGGGG59680.129231251615932No Hit
GGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG57890.1253551802286579No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGGGGGGGGG54220.11740815118324117No Hit
GGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG49220.1065811361349895No Hit
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC48160.10428580894476012No Hit
GNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG48110.10417753879427762No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGAGGGGGGGGGGG46460.10060462382835457No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)