#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	LeftGene	LeftLocalBreakpoint	LeftBreakpoint	RightGene	RightLocalBreakpoint	RightBreakpoint	SpliceType	LargeAnchorSupport	NumCounterFusionLeft	NumCounterFusionRight	FAR_left	FAR_right	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	FFPM	microh_brkpt_dist	num_microh_near_brkpt
GOPC--ROS1	326	1	326.00	1.00	GOPC^ENSG00000047932.14	9512	chr6:117566854:-	ROS1^ENSG00000047936.11	53814	chr6:117321394:-	ONLY_REF_SPLICE	YES	22	25	14.26	12.62	GT	1.7968	AG	1.9329	3.3257	1252	0
GOPC--ROS1	4	0	4.00	0.00	GOPC^ENSG00000047932.14	9512	chr6:117566854:-	ROS1^ENSG00000047936.11	54950	chr6:117320030:-	ONLY_REF_SPLICE	YES	22	430	0.22	0.01	GT	1.7968	AG	1.5301	0.0407	141	0
PTPN21--CEP128	136	4	136.00	3.94	PTPN21^ENSG00000070778.13	3609	chr14:88550238:-	CEP128^ENSG00000100629.17	45539	chr14:80838278:-	ONLY_REF_SPLICE	YES	106	42	1.32	3.28	GT	1.7232	AG	1.9329	1.4233	1026	0
PTPN21--CEP128	4	0	4.00	0.00	PTPN21^ENSG00000070778.13	3609	chr14:88550238:-	CEP128^ENSG00000100629.17	46614	chr14:80836337:-	ONLY_REF_SPLICE	YES	106	76	0.05	0.06	GT	1.7232	AG	1.9086	0.0407	1212	0
PTPN21--CEP128	1	5	1.00	1.06	PTPN21^ENSG00000070778.13	4732	chr14:88547529:-	CEP128^ENSG00000100629.17	45539	chr14:80838278:-	ONLY_REF_SPLICE	YES	63	42	0.11	0.16	GT	1.8892	AG	1.9329	0.021	1628	0
PTPN21--CEP128	2	0	2.00	0.00	PTPN21^ENSG00000070778.13	3609	chr14:88550238:-	CEP128^ENSG00000100629.17	47747	chr14:80831294:-	ONLY_REF_SPLICE	YES	106	33	0.03	0.09	GT	1.7232	AG	1.6402	0.0203	1579	0
AC092691.1--LSAMP	121	0	121.00	0.00	AC092691.1^ENSG00000239268.3	1411	chr3:117997182:-	LSAMP^ENSG00000185565.12	10860	chr3:116444955:-	ONLY_REF_SPLICE	YES	1	26	61.00	4.52	GT	1.8892	AG	1.9329	1.2306	271	0
AC092691.1--LSAMP	1	0	1.00	0.00	AC092691.1^ENSG00000239268.3	1411	chr3:117997182:-	LSAMP^ENSG00000185565.12	11944	chr3:116086556:-	ONLY_REF_SPLICE	YES	1	44	1.00	0.04	GT	1.8892	AG	1.8062	0.0102	1318	0
ARFGEF1--PREX2	73	2	73.00	1.97	ARFGEF1^ENSG00000066777.9	1618	chr8:67343164:-	PREX2^ENSG00000046889.19	48514	chr8:68017846:+	ONLY_REF_SPLICE	YES	99	12	0.76	5.85	GT	1.7232	AG	1.9329	0.7624	1203	0
ARFGEF1--PREX2	2	1	2.00	0.03	ARFGEF1^ENSG00000066777.9	1618	chr8:67343164:-	PREX2^ENSG00000046889.19	49586	chr8:68019549:+	ONLY_REF_SPLICE	YES	99	43	0.04	0.09	GT	1.7232	AG	1.8892	0.0206	2232	0
KHDRBS1--ARMH1	24	0	24.00	0.00	KHDRBS1^ENSG00000121774.18	3752	chr1:32031640:+	ARMH1^ENSG00000198520.12	21390	chr1:44689676:+	ONLY_REF_SPLICE	YES	358	17	0.07	1.39	GT	1.4566	AG	1.9656	0.2441	3092	0
KHDRBS1--ARMH1	8	0	8.00	0.00	KHDRBS1^ENSG00000121774.18	3752	chr1:32031640:+	ARMH1^ENSG00000198520.12	19910	chr1:44688196:+	ONLY_REF_SPLICE	YES	358	5	0.03	1.50	GT	1.4566	AG	1.9329	0.0814	3516	0
KHDRBS1--ARMH1	4	0	4.00	0.00	KHDRBS1^ENSG00000121774.18	3752	chr1:32031640:+	ARMH1^ENSG00000198520.12	25839	chr1:44700923:+	ONLY_REF_SPLICE	YES	358	43	0.01	0.11	GT	1.4566	AG	1.9899	0.0407	2917	0
KHDRBS1--ARMH1	1	0	1.00	0.00	KHDRBS1^ENSG00000121774.18	3752	chr1:32031640:+	ARMH1^ENSG00000198520.12	20823	chr1:44689109:+	ONLY_REF_SPLICE	YES	358	7	0.01	0.25	GT	1.4566	AG	1.8295	0.0102	3181	0
KHDRBS1--ARMH1	1	0	1.00	0.00	KHDRBS1^ENSG00000121774.18	3752	chr1:32031640:+	ARMH1^ENSG00000198520.12	17845	chr1:44684393:+	ONLY_REF_SPLICE	YES	358	4	0.01	0.40	GT	1.4566	AG	1.8892	0.0102	4857	0
KHDRBS1--ARMH1	1	0	1.00	0.00	KHDRBS1^ENSG00000121774.18	3752	chr1:32031640:+	ARMH1^ENSG00000198520.12	27036	chr1:44704089:+	ONLY_REF_SPLICE	YES	358	47	0.01	0.04	GT	1.4566	AG	1.9656	0.0102	1874	0
LINC01674--POTED	19	1	19.00	1.00	LINC01674^ENSG00000228159.2	6698	chr21:13565781:+	POTED^ENSG00000166351.10	12994	chr21:13615123:+	ONLY_REF_SPLICE	YES	0	12	21.00	1.62	GT	1.7232	AG	1.8892	0.2034	1780	0
LINC01674--POTED	6	0	6.00	0.00	LINC01674^ENSG00000228159.2	1165	chr21:13516271:+	POTED^ENSG00000166351.10	12994	chr21:13615123:+	ONLY_REF_SPLICE	YES	0	12	7.00	0.54	GT	1.8892	AG	1.8892	0.061	3739	0
LINC01674--POTED	2	0	2.00	0.00	LINC01674^ENSG00000228159.2	1165	chr21:13516271:+	POTED^ENSG00000166351.10	22104	chr21:13630941:+	ONLY_REF_SPLICE	YES	0	20	3.00	0.14	GT	1.8892	AG	1.4566	0.0203	2638	0
LINC01674--POTED	2	0	2.00	0.00	LINC01674^ENSG00000228159.2	6698	chr21:13565781:+	POTED^ENSG00000166351.10	22104	chr21:13630941:+	ONLY_REF_SPLICE	YES	0	20	3.00	0.14	GT	1.7232	AG	1.4566	0.0203	1346	0
LINC01674--POTED	1	0	1.00	0.00	LINC01674^ENSG00000228159.2	6698	chr21:13565781:+	POTED^ENSG00000166351.10	15549	chr21:13620158:+	ONLY_REF_SPLICE	YES	0	22	2.00	0.09	GT	1.7232	AG	1.8062	0.0102	3912	0
LINC01674--POTED	1	0	1.00	0.00	LINC01674^ENSG00000228159.2	6698	chr21:13565781:+	POTED^ENSG00000166351.10	13268	chr21:13615397:+	ONLY_REF_SPLICE	YES	0	28	2.00	0.07	GT	1.7232	AG	1.9086	0.0102	1961	0
MIER1--CD177	16	0	16.00	0.00	MIER1^ENSG00000198160.15	2302	chr1:66926242:+	CD177^ENSG00000204936.10	27594	chr19:43353853:+	ONLY_REF_SPLICE	YES	228	3	0.07	4.25	GT	1.8892	AG	1.7968	0.1627	5564	0
MIER1--CD177	3	0	3.00	0.00	MIER1^ENSG00000198160.15	2302	chr1:66926242:+	CD177^ENSG00000204936.10	27948	chr19:43354207:+	ONLY_REF_SPLICE	YES	228	17	0.02	0.22	GT	1.8892	AG	1.8062	0.0305	5210	0
AC211476.4--CCDC146	14	0	14.00	0.00	AC211476.4^ENSG00000277125.1	3692	chr7:73069531:+	CCDC146^ENSG00000135205.15	10175	chr7:77167658:+	ONLY_REF_SPLICE	YES	6	1	2.14	7.50	GT	1.4566	AG	1.7465	0.1424	6786	0
AC211476.4--CCDC146	7	0	7.00	0.00	AC211476.4^ENSG00000277125.1	3692	chr7:73069531:+	CCDC146^ENSG00000135205.15	11342	chr7:77236947:+	ONLY_REF_SPLICE	YES	6	13	1.14	0.57	GT	1.4566	AG	1.9329	0.0712	5731	0
AC211476.4--CCDC146	2	0	2.00	0.00	AC211476.4^ENSG00000277125.1	4781	chr7:73072670:+	CCDC146^ENSG00000135205.15	11342	chr7:77236947:+	ONLY_REF_SPLICE	YES	11	13	0.25	0.21	GT	1.8323	AG	1.9329	0.0203	6311	0
RPSAP52--HMGA2	13	0	13.00	0.00	RPSAP52^ENSG00000241749.4	1155	chr12:65826843:-	HMGA2^ENSG00000149948.14	8958	chr12:65828001:+	ONLY_REF_SPLICE	YES	9	1877	1.40	0.01	GT	1.9329	AG	1.8256	0.1322	799	0
RPSAP52--HMGA2	1	0	1.00	0.00	RPSAP52^ENSG00000241749.4	1155	chr12:65826843:-	HMGA2^ENSG00000149948.14	18923	chr12:65951383:+	ONLY_REF_SPLICE	YES	9	1185	0.20	0.00	GT	1.9329	AG	1.9329	0.0102	677	0
ARFGEF1--RALBP1	12	0	12.00	0.00	ARFGEF1^ENSG00000066777.9	1618	chr8:67343164:-	RALBP1^ENSG00000017797.13	50269	chr18:9479344:+	ONLY_REF_SPLICE	YES	99	54	0.13	0.24	GT	1.7232	AG	1.7819	0.122	1217	0
AK2--TESK2	11	0	11.00	0.00	AK2^ENSG00000004455.17	3067	chr1:33036736:-	TESK2^ENSG00000070759.17	30956	chr1:45345558:-	ONLY_REF_SPLICE	YES	696	38	0.02	0.31	GT	1.7819	AG	1.9086	0.1119	895	0
AK2--TESK2	6	0	6.00	0.00	AK2^ENSG00000004455.17	3067	chr1:33036736:-	TESK2^ENSG00000070759.17	30520	chr1:45345994:-	ONLY_REF_SPLICE	YES	696	20	0.01	0.33	GT	1.7819	AG	1.9656	0.061	1329	0
TMED5--DR1	10	0	10.00	0.00	TMED5^ENSG00000117500.13	1463	chr1:93180054:-	DR1^ENSG00000117505.13	19171	chr1:93353908:+	ONLY_REF_SPLICE	YES	567	273	0.02	0.04	GT	1.8892	AG	1.9329	0.1017	1482	0
OR2M3--OR2M4	9	0	9.00	0.00	OR2M3^ENSG00000228198.3	1037	chr1:248197301:+	OR2M4^ENSG00000171180.3	16098	chr1:248238910:+	ONLY_REF_SPLICE	YES	0	57	10.00	0.17	GT	1.7819	AG	1.7968	0.0915	849	0
PPTC7--TCTN1	9	0	9.00	0.00	PPTC7^ENSG00000196850.6	1510	chr12:110582809:-	TCTN1^ENSG00000204852.17	36709	chr12:110647211:+	ONLY_REF_SPLICE	YES	151	219	0.07	0.05	GT	1.7056	AG	1.8892	0.0915	2740	0
PPTC7--TCTN1	1	0	1.00	0.00	PPTC7^ENSG00000196850.6	1510	chr12:110582809:-	TCTN1^ENSG00000204852.17	36694	chr12:110647196:+	ONLY_REF_SPLICE	YES	151	219	0.01	0.01	GT	1.7056	AG	1.7232	0.0102	2726	0
PSMD8--RYR1	8	0	8.00	0.00	PSMD8^ENSG00000099341.12	6401	chr19:38382228:+	RYR1^ENSG00000196218.13	41065	chr19:38489177:+	ONLY_REF_SPLICE	YES	363	11	0.02	0.75	GT	1.8062	AG	1.8323	0.0814	84	1
CEP128--ALDH6A1	7	0	7.00	0.00	CEP128^ENSG00000100629.17	15635	chr14:80840682:-	ALDH6A1^ENSG00000119711.13	43770	chr14:74075017:-	ONLY_REF_SPLICE	YES	33	88	0.24	0.09	GT	1.7232	AG	1.8892	0.0712	4764	0
CEP128--ALDH6A1	1	0	1.00	0.00	CEP128^ENSG00000100629.17	14548	chr14:80862757:-	ALDH6A1^ENSG00000119711.13	43770	chr14:74075017:-	ONLY_REF_SPLICE	YES	50	88	0.04	0.02	GT	1.9329	AG	1.8892	0.0102	5523	0
ENTPD4--PHYHIP	7	0	3.50	0.00	ENTPD4^ENSG00000197217.13	18809	chr8:23403954:-	PHYHIP^ENSG00000168490.14	26069	chr8:22228386:-	ONLY_REF_SPLICE	YES	1	4	4.00	1.60	GT	1.8323	AG	1.7819	0.0356	192	0
LOXL2--PHYHIP	7	0	3.50	0.00	LOXL2^ENSG00000134013.16	2551	chr8:23403954:-	PHYHIP^ENSG00000168490.14	29046	chr8:22228386:-	ONLY_REF_SPLICE	YES	487	4	0.02	1.60	GT	1.8323	AG	1.7819	0.0356	192	0
TPTE--BAGE2	7	0	7.00	0.00	TPTE^ENSG00000274391.5	3309	chr21:10527412:+	BAGE2^ENSG00000187172.15	31757	chr21:10454134:+	ONLY_REF_SPLICE	YES	86	757	0.09	0.01	GT	1.9656	AG	1.7968	0.0712	4448	0
TPTE--BAGE2	7	0	7.00	0.00	TPTE^ENSG00000274391.5	3309	chr21:10527412:+	BAGE2^ENSG00000187172.15	45067	chr21:10514122:+	ONLY_REF_SPLICE	YES	86	48	0.09	0.16	GT	1.9656	AG	1.7819	0.0712	9593	0
TPTE--BAGE2	3	0	3.00	0.00	TPTE^ENSG00000274391.5	3309	chr21:10527412:+	BAGE2^ENSG00000187172.15	42788	chr21:10499475:+	ONLY_REF_SPLICE	YES	86	96	0.05	0.04	GT	1.9656	AG	1.8323	0.0305	7385	0
TPTE--BAGE2	2	0	2.00	0.00	TPTE^ENSG00000274391.5	8465	chr21:10552716:+	BAGE2^ENSG00000187172.15	31757	chr21:10454134:+	ONLY_REF_SPLICE	YES	138	757	0.02	0.00	GT	1.8295	AG	1.7968	0.0203	2432	0
TPTE--BAGE2	2	0	2.00	0.00	TPTE^ENSG00000274391.5	6471	chr21:10542448:+	BAGE2^ENSG00000187172.15	45067	chr21:10514122:+	ONLY_REF_SPLICE	YES	178	48	0.02	0.06	GT	1.7465	AG	1.7819	0.0203	6676	0
TPTE--BAGE2	2	0	2.00	0.00	TPTE^ENSG00000274391.5	8465	chr21:10552716:+	BAGE2^ENSG00000187172.15	42788	chr21:10499475:+	ONLY_REF_SPLICE	YES	138	96	0.02	0.03	GT	1.8295	AG	1.8323	0.0203	4770	0
TPTE--BAGE2	1	0	1.00	0.00	TPTE^ENSG00000274391.5	6471	chr21:10542448:+	BAGE2^ENSG00000187172.15	38047	chr21:10485618:+	ONLY_REF_SPLICE	YES	178	264	0.01	0.01	GT	1.7465	AG	1.8295	0.0102	2580	0
TPTE--BAGE2	1	0	1.00	0.00	TPTE^ENSG00000274391.5	7405	chr21:10543382:+	BAGE2^ENSG00000187172.15	42788	chr21:10499475:+	ONLY_REF_SPLICE	YES	162	96	0.01	0.02	GT	1.9219	AG	1.8323	0.0102	5799	0
TPTE--BAGE2	1	0	1.00	0.00	TPTE^ENSG00000274391.5	8465	chr21:10552716:+	BAGE2^ENSG00000187172.15	45067	chr21:10514122:+	ONLY_REF_SPLICE	YES	138	48	0.01	0.04	GT	1.8295	AG	1.7819	0.0102	4716	0
TPTE--BAGE2	1	0	1.00	0.00	TPTE^ENSG00000274391.5	8465	chr21:10552716:+	BAGE2^ENSG00000187172.15	38047	chr21:10485618:+	ONLY_REF_SPLICE	YES	138	264	0.01	0.01	GT	1.8295	AG	1.8295	0.0102	3862	0
VCL--ADK	7	0	7.00	0.00	VCL^ENSG00000035403.18	3233	chr10:73998375:+	ADK^ENSG00000156110.15	57954	chr10:74708321:+	ONLY_REF_SPLICE	YES	756	401	0.01	0.02	GT	1.8892	AG	1.7968	0.0712	1017	0
SPOCD1--ADGRB2	6	1	6.00	0.50	SPOCD1^ENSG00000134668.12	12592	chr1:31792678:-	ADGRB2^ENSG00000121753.13	23002	chr1:31756815:-	ONLY_REF_SPLICE	YES	419	108	0.02	0.07	GT	1.5656	AG	1.6895	0.0661	480	0
SPOCD1--ADGRB2	6	1	6.00	0.50	SPOCD1^ENSG00000134668.12	13055	chr1:31792215:-	ADGRB2^ENSG00000121753.13	23002	chr1:31756815:-	ONLY_REF_SPLICE	YES	336	108	0.02	0.07	GT	1.7465	AG	1.6895	0.0661	270	0
SPOCD1--ADGRB2	1	0	1.00	0.00	SPOCD1^ENSG00000134668.12	12592	chr1:31792678:-	ADGRB2^ENSG00000121753.13	24819	chr1:31744731:-	ONLY_REF_SPLICE	YES	419	70	0.00	0.03	GT	1.5656	AG	1.6402	0.0102	1162	0
SPOCD1--ADGRB2	1	0	1.00	0.00	SPOCD1^ENSG00000134668.12	13055	chr1:31792215:-	ADGRB2^ENSG00000121753.13	24819	chr1:31744731:-	ONLY_REF_SPLICE	YES	336	70	0.01	0.03	GT	1.7465	AG	1.6402	0.0102	1071	0
CARHSP1--PDILT	6	0	6.00	0.00	CARHSP1^ENSG00000153048.11	1047	chr16:8868966:-	PDILT^ENSG00000169340.10	22536	chr16:20369689:-	ONLY_REF_SPLICE	YES	108	33	0.06	0.21	GT	1.8323	AG	1.3996	0.061	1673	0
CARHSP1--PDILT	5	0	5.00	0.00	CARHSP1^ENSG00000153048.11	1047	chr16:8868966:-	PDILT^ENSG00000169340.10	18943	chr16:20376201:-	ONLY_REF_SPLICE	YES	108	13	0.06	0.43	GT	1.8323	AG	1.7819	0.0509	1378	0
CARHSP1--PDILT	3	0	3.00	0.00	CARHSP1^ENSG00000153048.11	1047	chr16:8868966:-	PDILT^ENSG00000169340.10	21215	chr16:20373122:-	ONLY_REF_SPLICE	YES	108	29	0.04	0.13	GT	1.8323	AG	1.7465	0.0305	1389	0
CHD6--PTPRT	6	0	6.00	0.00	CHD6^ENSG00000124177.16	43855	chr20:41412144:-	PTPRT^ENSG00000196090.12	71035	chr20:42199388:-	ONLY_REF_SPLICE	YES	54	0	0.13	7.00	GT	1.7465	AG	1.7819	0.061	2171	0
CHD6--PTPRT	1	0	1.00	0.00	CHD6^ENSG00000124177.16	43855	chr20:41412144:-	PTPRT^ENSG00000196090.12	69996	chr20:42236258:-	ONLY_REF_SPLICE	YES	54	1	0.04	1.00	GT	1.7465	AG	1.8323	0.0102	1925	0
EYA1--SFRP1	4	0	4.00	0.00	EYA1^ENSG00000104313.20	23224	chr8:71317552:-	SFRP1^ENSG00000104332.12	42635	chr8:41303538:-	ONLY_REF_SPLICE	YES	337	2431	0.01	0.00	GT	1.9329	AG	1.9656	0.0407	2346	0
HDAC5--TEX2	4	0	4.00	0.00	HDAC5^ENSG00000108840.15	2660	chr17:44117494:-	TEX2^ENSG00000136478.8	29323	chr17:64214242:-	ONLY_REF_SPLICE	YES	263	117	0.02	0.04	GT	1.8892	AG	1.9329	0.0407	340	0
IL7--AC068700.2	3	0	3.00	0.00	IL7^ENSG00000104432.14	1611	chr8:78804913:-	AC068700.2^ENSG00000286675.1	20549	chr8:78630426:-	ONLY_REF_SPLICE	YES	154	0	0.03	4.00	GT	1.9899	AG	1.8892	0.0305	1195	0
IL7--AC068700.2	3	0	3.00	0.00	IL7^ENSG00000104432.14	2748	chr8:78798072:-	AC068700.2^ENSG00000286675.1	20549	chr8:78630426:-	ONLY_REF_SPLICE	YES	59	0	0.07	4.00	GT	1.8323	AG	1.8892	0.0305	228	0
IL7--AC068700.2	2	0	2.00	0.00	IL7^ENSG00000104432.14	2692	chr8:78798128:-	AC068700.2^ENSG00000286675.1	20549	chr8:78630426:-	ONLY_REF_SPLICE	YES	102	0	0.03	3.00	GT	1.5656	AG	1.8892	0.0203	243	0
ETNK1--SOX5	2	0	2.00	0.00	ETNK1^ENSG00000139163.16	1512	chr12:22625586:+	SOX5^ENSG00000134532.19	43739	chr12:23896024:-	ONLY_REF_SPLICE	YES	634	957	0.00	0.00	GT	1.8892	AG	1.9899	0.0203	2308	0
HIVEP3--MAD2L2	2	0	2.00	0.00	HIVEP3^ENSG00000127124.16	12121	chr1:41628749:-	MAD2L2^ENSG00000116670.15	38735	chr1:11675731:-	ONLY_REF_SPLICE	YES	46	709	0.06	0.00	GT	1.9656	AG	1.9656	0.0203	125	0
SFI1--NSD2	2	0	2.00	0.00	SFI1^ENSG00000198089.16	12083	chr22:31557059:+	NSD2^ENSG00000109685.19	78764	chr4:1974863:+	ONLY_REF_SPLICE	YES	203	296	0.01	0.01	GT	1.9656	AG	1.9219	0.0203	1354	0
ZDHHC14--AP002851.1	2	0	2.00	0.00	ZDHHC14^ENSG00000175048.17	4669	chr6:157593146:+	AP002851.1^ENSG00000283959.1	24696	chr8:102666203:+	ONLY_REF_SPLICE	YES	152	1	0.02	1.50	GT	1.9329	AG	1.9086	0.0203	2681	0
ARMC8--PHC3	1	1	1.00	1.00	ARMC8^ENSG00000114098.18	1352	chr3:138187599:+	PHC3^ENSG00000173889.16	50975	chr3:170113519:-	ONLY_REF_SPLICE	YES	289	367	0.01	0.01	GT	1.9329	AG	1.8062	0.0204	2286	0
ALK--AC009413.1	1	0	1.00	0.00	ALK^ENSG00000171094.18	7212	chr2:29383732:-	AC009413.1^ENSG00000287145.1	40115	chr2:41724687:+	ONLY_REF_SPLICE	YES	682	0	0.00	2.00	GT	1.8323	AG	1.8892	0.0102	1579	0