File Info

Filename
fastq_list.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-101300/bclconvert/L002/Reports/fastq_list.csv
Size
9.7 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a
Published
May 28, 2026 11:05 AM

Content

View in new tab
RGID RGSM RGLB Lane Read1File Read2File
TCACCGTGGT.TCGCTCTGCT.2 RT4_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/RT4_FFPE_RNA_0001_B23LG7FLT4_1_S1_L002_R1_001.fastq.gz output/RT4_FFPE_RNA_0001_B23LG7FLT4_1_S1_L002_R2_001.fastq.gz
CAACTACCGC.ATGCTGCAGG.2 786-O_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/786-O_FFPE_RNA_0001_B23LG7FLT4_1_S2_L002_R1_001.fastq.gz output/786-O_FFPE_RNA_0001_B23LG7FLT4_1_S2_L002_R2_001.fastq.gz
ACTCGTCCAG.TGGTCCTCGT.2 A549_FFPE_01_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/A549_FFPE_01_RNA_0001_B23LG7FLT4_1_S3_L002_R1_001.fastq.gz output/A549_FFPE_01_RNA_0001_B23LG7FLT4_1_S3_L002_R2_001.fastq.gz
TCCGGAGAAC.ATTCCTCTGG.2 U118MG_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/U118MG_FFPE_RNA_0001_B23LG7FLT4_1_S4_L002_R1_001.fastq.gz output/U118MG_FFPE_RNA_0001_B23LG7FLT4_1_S4_L002_R2_001.fastq.gz
TTGTGAGAAG.TTCACTGGCT.2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1_S5_L002_R1_001.fastq.gz output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1_S5_L002_R2_001.fastq.gz
CCGAAGGTTC.TCTATCTGAC.2 BT-20_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/BT-20_FFPE_RNA_0001_B23LG7FLT4_1_S6_L002_R1_001.fastq.gz output/BT-20_FFPE_RNA_0001_B23LG7FLT4_1_S6_L002_R2_001.fastq.gz
ATACACACCT.AGTGTGATAG.2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_1_S7_L002_R1_001.fastq.gz output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_1_S7_L002_R2_001.fastq.gz
AGCCTCTGCT.TTCGCCTTAG.2 Hs746T_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/Hs746T_FFPE_RNA_0001_B23LG7FLT4_1_S8_L002_R1_001.fastq.gz output/Hs746T_FFPE_RNA_0001_B23LG7FLT4_1_S8_L002_R2_001.fastq.gz
CGGATCATTA.CCGTAACCTT.2 RT4_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/RT4_FFPE_RNA_0001_B23LG7FLT4_2_S9_L002_R1_001.fastq.gz output/RT4_FFPE_RNA_0001_B23LG7FLT4_2_S9_L002_R2_001.fastq.gz
CTCTCTCTAG.ACTTGATTGG.2 786-O_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/786-O_FFPE_RNA_0001_B23LG7FLT4_2_S10_L002_R1_001.fastq.gz output/786-O_FFPE_RNA_0001_B23LG7FLT4_2_S10_L002_R2_001.fastq.gz
AAGGCTCCAT.TGAAGATGGA.2 A549_FFPE_01_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/A549_FFPE_01_RNA_0001_B23LG7FLT4_2_S11_L002_R1_001.fastq.gz output/A549_FFPE_01_RNA_0001_B23LG7FLT4_2_S11_L002_R2_001.fastq.gz
CTTGTTACTG.AATTCGGTGG.2 Hs746T_FFPE_RNA_0001_23LG7FLT4_1 UnknownLibrary 2 output/Hs746T_FFPE_RNA_0001_23LG7FLT4_1_S12_L002_R1_001.fastq.gz output/Hs746T_FFPE_RNA_0001_23LG7FLT4_1_S12_L002_R2_001.fastq.gz
GATAGATCAG.CGTACGCCAT.2 U118MG_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/U118MG_FFPE_RNA_0001_B23LG7FLT4_2_S13_L002_R1_001.fastq.gz output/U118MG_FFPE_RNA_0001_B23LG7FLT4_2_S13_L002_R2_001.fastq.gz
GCAGAAGTCT.CTGCGTCGAA.2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2_S14_L002_R1_001.fastq.gz output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2_S14_L002_R2_001.fastq.gz
TATACGATGC.CTCCTAATCT.2 BT-20_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/BT-20_FFPE_RNA_0001_B23LG7FLT4_2_S15_L002_R1_001.fastq.gz output/BT-20_FFPE_RNA_0001_B23LG7FLT4_2_S15_L002_R2_001.fastq.gz
AACGCTCTGA.GAGTAACGTG.2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_2_S16_L002_R1_001.fastq.gz output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_2_S16_L002_R2_001.fastq.gz
GATTGGCGAT.CTGTCTCATT.2 Hs746T_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2_S17_L002_R1_001.fastq.gz output/Hs746T_FFPE_RNA_0001_B23LG7FLT4_2_S17_L002_R2_001.fastq.gz
CAAGACGGAC.GTACTCCGTC.2 RT4_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/RT4_FFPE_RNA_0001_B23LG7FLT4_3_S18_L002_R1_001.fastq.gz output/RT4_FFPE_RNA_0001_B23LG7FLT4_3_S18_L002_R2_001.fastq.gz
CCACTCAACG.CCTGTCTAGA.2 786-O_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/786-O_FFPE_RNA_0001_B23LG7FLT4_3_S19_L002_R1_001.fastq.gz output/786-O_FFPE_RNA_0001_B23LG7FLT4_3_S19_L002_R2_001.fastq.gz
AGCCACTCGT.CCAAGAGGAT.2 A549_FFPE_01_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/A549_FFPE_01_RNA_0001_B23LG7FLT4_3_S20_L002_R1_001.fastq.gz output/A549_FFPE_01_RNA_0001_B23LG7FLT4_3_S20_L002_R2_001.fastq.gz
GCGAAGAATT.TCACGGATGA.2 U118MG_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/U118MG_FFPE_RNA_0001_B23LG7FLT4_3_S21_L002_R1_001.fastq.gz output/U118MG_FFPE_RNA_0001_B23LG7FLT4_3_S21_L002_R2_001.fastq.gz
TGTCGGTGCT.AGTTCTTCCG.2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3_S22_L002_R1_001.fastq.gz output/SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3_S22_L002_R2_001.fastq.gz
TCTACAGCTA.AATGGAAGAC.2 BT-20_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/BT-20_FFPE_RNA_0001_B23LG7FLT4_3_S23_L002_R1_001.fastq.gz output/BT-20_FFPE_RNA_0001_B23LG7FLT4_3_S23_L002_R2_001.fastq.gz
CAACCATGAT.ATAAGGTGAC.2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_3_S24_L002_R1_001.fastq.gz output/22Rv1_FFPE_RNA_0001_B23LG7FLT4_3_S24_L002_R2_001.fastq.gz
CGCACATTAC.TGGAACGTAG.2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_1 UnknownLibrary 2 output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_1_S25_L002_R1_001.fastq.gz output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_1_S25_L002_R2_001.fastq.gz
ATCTAACCTG.CCTGTGGTTC.2 MCF7_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/MCF7_FFPE_RNA_0001_B23LG7FLT4_1_S26_L002_R1_001.fastq.gz output/MCF7_FFPE_RNA_0001_B23LG7FLT4_1_S26_L002_R2_001.fastq.gz
GCGACAATAT.ATTCGTACGG.2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1_S27_L002_R1_001.fastq.gz output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1_S27_L002_R2_001.fastq.gz
TTGCCGTATC.ACATTAGCGG.2 SW780_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/SW780_FFPE_RNA_0001_B23LG7FLT4_1_S28_L002_R1_001.fastq.gz output/SW780_FFPE_RNA_0001_B23LG7FLT4_1_S28_L002_R2_001.fastq.gz
GATCCACTTA.GTGTTCTGTT.2 A673_FFPE_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/A673_FFPE_RNA_0001_B23LG7FLT4_1_S29_L002_R1_001.fastq.gz output/A673_FFPE_RNA_0001_B23LG7FLT4_1_S29_L002_R2_001.fastq.gz
TCCGAGATGC.TGTCACCTTA.2 ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1 UnknownLibrary 2 output/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1_S30_L002_R1_001.fastq.gz output/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1_S30_L002_R2_001.fastq.gz
ATAGAGTTCG.GCATAACGGC.2 SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1 UnknownLibrary 2 output/SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1_S31_L002_R1_001.fastq.gz output/SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1_S31_L002_R2_001.fastq.gz
GCATTCCTTC.GAGCCTGCTT.2 FFPE_V4_0001_RNA_0001_B23LG7FLT4_1 UnknownLibrary 2 output/FFPE_V4_0001_RNA_0001_B23LG7FLT4_1_S32_L002_R1_001.fastq.gz output/FFPE_V4_0001_RNA_0001_B23LG7FLT4_1_S32_L002_R2_001.fastq.gz
AATCGTGCGG.GTTCAGTAGA.2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_2 UnknownLibrary 2 output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_2_S33_L002_R1_001.fastq.gz output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_2_S33_L002_R2_001.fastq.gz
TACCGGAGCA.CTTAGCAGGC.2 MCF7_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/MCF7_FFPE_RNA_0001_B23LG7FLT4_2_S34_L002_R1_001.fastq.gz output/MCF7_FFPE_RNA_0001_B23LG7FLT4_2_S34_L002_R2_001.fastq.gz
AGCACCAGTC.CTCGTGTAGC.2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2_S35_L002_R1_001.fastq.gz output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2_S35_L002_R2_001.fastq.gz
TACCTAGACT.GCATTCGAAT.2 SW780_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/SW780_FFPE_RNA_0001_B23LG7FLT4_2_S36_L002_R1_001.fastq.gz output/SW780_FFPE_RNA_0001_B23LG7FLT4_2_S36_L002_R2_001.fastq.gz
CAGACTGCAG.ACCGGCCTTA.2 A673_FFPE_RNA_0001_B23LG7FLT4_2 UnknownLibrary 2 output/A673_FFPE_RNA_0001_B23LG7FLT4_2_S37_L002_R1_001.fastq.gz output/A673_FFPE_RNA_0001_B23LG7FLT4_2_S37_L002_R2_001.fastq.gz
GTTAGTGCCT.CTGCATAGCA.2 ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1 UnknownLibrary 2 output/ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1_S38_L002_R1_001.fastq.gz output/ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1_S38_L002_R2_001.fastq.gz
CGCAATAAGA.CCTACAGCGT.2 EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1 UnknownLibrary 2 output/EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1_S39_L002_R1_001.fastq.gz output/EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1_S39_L002_R2_001.fastq.gz
TCGGTCTGTT.TGGTTGGTAC.2 FFPE_HD789_01_RNA_0002_B23LG7FLT4_1 UnknownLibrary 2 output/FFPE_HD789_01_RNA_0002_B23LG7FLT4_1_S40_L002_R1_001.fastq.gz output/FFPE_HD789_01_RNA_0002_B23LG7FLT4_1_S40_L002_R2_001.fastq.gz
CTAGACGAGC.GAGGATGGAT.2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_3 UnknownLibrary 2 output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_3_S41_L002_R1_001.fastq.gz output/KG1_FFPE_01_RNA_0003_B23LG7FLT4_3_S41_L002_R2_001.fastq.gz
GTAATACTCG.CTCACGAATC.2 MCF7_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/MCF7_FFPE_RNA_0001_B23LG7FLT4_3_S42_L002_R1_001.fastq.gz output/MCF7_FFPE_RNA_0001_B23LG7FLT4_3_S42_L002_R2_001.fastq.gz
GATTCTTAGC.TGCTAGCGGT.2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3_S43_L002_R1_001.fastq.gz output/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3_S43_L002_R2_001.fastq.gz
TGTGATCGCG.AGACGAGTCT.2 SW780_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/SW780_FFPE_RNA_0001_B23LG7FLT4_3_S44_L002_R1_001.fastq.gz output/SW780_FFPE_RNA_0001_B23LG7FLT4_3_S44_L002_R2_001.fastq.gz
ATCGAGAGAC.TGGAAGCAGA.2 A673_FFPE_RNA_0001_B23LG7FLT4_3 UnknownLibrary 2 output/A673_FFPE_RNA_0001_B23LG7FLT4_3_S45_L002_R1_001.fastq.gz output/A673_FFPE_RNA_0001_B23LG7FLT4_3_S45_L002_R2_001.fastq.gz
CTGAACGTAT.GCCAATACAT.2 BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1 UnknownLibrary 2 output/BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1_S46_L002_R1_001.fastq.gz output/BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1_S46_L002_R2_001.fastq.gz
CACTAGACTT.TGTGGATTAG.2 OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1 UnknownLibrary 2 output/OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1_S47_L002_R1_001.fastq.gz output/OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1_S47_L002_R2_001.fastq.gz
CGTCGCCTAT.TATCTTCTCG.2 NTC_0001_0001_B23LG7FLT4_1 UnknownLibrary 2 output/NTC_0001_0001_B23LG7FLT4_1_S48_L002_R1_001.fastq.gz output/NTC_0001_0001_B23LG7FLT4_1_S48_L002_R2_001.fastq.gz
49 rows