File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-101300/bclconvert/L002/Reports/Demultiplex_Stats.csv
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5.6 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a
Published
May 28, 2026 11:05 AM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
2 RT4_FFPE_RNA_0001_B23LG7FLT4_1 TCACCGTGGT-TCGCTCTGCT 95975335 90386876 5588459 0 0.0236 0.9418 0.0582 0.0000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_1 CAACTACCGC-ATGCTGCAGG 116411059 109806430 6604629 0 0.0286 0.9433 0.0567 0.0000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_1 ACTCGTCCAG-TGGTCCTCGT 977059 918820 58239 0 0.0002 0.9404 0.0596 0.0000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_1 TCCGGAGAAC-ATTCCTCTGG 136666076 128624685 8041391 0 0.0335 0.9412 0.0588 0.0000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1 TTGTGAGAAG-TTCACTGGCT 161847607 152684086 9163521 0 0.0397 0.9434 0.0566 0.0000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_1 CCGAAGGTTC-TCTATCTGAC 22177161 20920181 1256980 0 0.0054 0.9433 0.0567 0.0000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_1 ATACACACCT-AGTGTGATAG 4374807 4104930 269877 0 0.0011 0.9383 0.0617 0.0000
2 Hs746T_FFPE_RNA_0001_B23LG7FLT4_1 AGCCTCTGCT-TTCGCCTTAG 135292281 125589507 9702774 0 0.0332 0.9283 0.0717 0.0000
2 RT4_FFPE_RNA_0001_B23LG7FLT4_2 CGGATCATTA-CCGTAACCTT 92754539 86759615 5994924 0 0.0228 0.9354 0.0646 0.0000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_2 CTCTCTCTAG-ACTTGATTGG 127731764 119838818 7892946 0 0.0313 0.9382 0.0618 0.0000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_2 AAGGCTCCAT-TGAAGATGGA 736408 694601 41807 0 0.0002 0.9432 0.0568 0.0000
2 Hs746T_FFPE_RNA_0001_23LG7FLT4_1 CTTGTTACTG-AATTCGGTGG 151239077 142836990 8402087 0 0.0371 0.9444 0.0556 0.0000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_2 GATAGATCAG-CGTACGCCAT 143087202 134394559 8692643 0 0.0351 0.9392 0.0608 0.0000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2 GCAGAAGTCT-CTGCGTCGAA 145964871 137368416 8596455 0 0.0358 0.9411 0.0589 0.0000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_2 TATACGATGC-CTCCTAATCT 22237327 20870452 1366875 0 0.0055 0.9385 0.0615 0.0000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2 AACGCTCTGA-GAGTAACGTG 3883268 3647259 236009 0 0.0010 0.9392 0.0608 0.0000
2 Hs746T_FFPE_RNA_0001_B23LG7FLT4_2 GATTGGCGAT-CTGTCTCATT 119585953 112040442 7545511 0 0.0293 0.9369 0.0631 0.0000
2 RT4_FFPE_RNA_0001_B23LG7FLT4_3 CAAGACGGAC-GTACTCCGTC 78696110 74040170 4655940 0 0.0193 0.9408 0.0592 0.0000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_3 CCACTCAACG-CCTGTCTAGA 120208957 113022938 7186019 0 0.0295 0.9402 0.0598 0.0000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_3 AGCCACTCGT-CCAAGAGGAT 1135167 1045727 89440 0 0.0003 0.9212 0.0788 0.0000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_3 GCGAAGAATT-TCACGGATGA 142888904 134141821 8747083 0 0.0351 0.9388 0.0612 0.0000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3 TGTCGGTGCT-AGTTCTTCCG 139376006 131289554 8086452 0 0.0342 0.9420 0.0580 0.0000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_3 TCTACAGCTA-AATGGAAGAC 20763090 19481811 1281279 0 0.0051 0.9383 0.0617 0.0000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_3 CAACCATGAT-ATAAGGTGAC 4372411 4113048 259363 0 0.0011 0.9407 0.0593 0.0000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_1 CGCACATTAC-TGGAACGTAG 96690699 91135463 5555236 0 0.0237 0.9425 0.0575 0.0000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_1 ATCTAACCTG-CCTGTGGTTC 109435058 102962904 6472154 0 0.0269 0.9409 0.0591 0.0000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1 GCGACAATAT-ATTCGTACGG 152560032 143562771 8997261 0 0.0374 0.9410 0.0590 0.0000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_1 TTGCCGTATC-ACATTAGCGG 91031565 85566087 5465478 0 0.0223 0.9400 0.0600 0.0000
2 A673_FFPE_RNA_0001_B23LG7FLT4_1 GATCCACTTA-GTGTTCTGTT 117788226 110644289 7143937 0 0.0289 0.9393 0.0607 0.0000
2 ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1 TCCGAGATGC-TGTCACCTTA 4644110 4275890 368220 0 0.0011 0.9207 0.0793 0.0000
2 SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1 ATAGAGTTCG-GCATAACGGC 2506233 2344661 161572 0 0.0006 0.9355 0.0645 0.0000
2 FFPE_V4_0001_RNA_0001_B23LG7FLT4_1 GCATTCCTTC-GAGCCTGCTT 69597426 50132507 19464919 0 0.0171 0.7203 0.2797 0.0000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_2 AATCGTGCGG-GTTCAGTAGA 110618058 104334864 6283194 0 0.0271 0.9432 0.0568 0.0000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_2 TACCGGAGCA-CTTAGCAGGC 97021649 91335065 5686584 0 0.0238 0.9414 0.0586 0.0000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2 AGCACCAGTC-CTCGTGTAGC 124473576 116968990 7504586 0 0.0305 0.9397 0.0603 0.0000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_2 TACCTAGACT-GCATTCGAAT 94983606 88267123 6716483 0 0.0233 0.9293 0.0707 0.0000
2 A673_FFPE_RNA_0001_B23LG7FLT4_2 CAGACTGCAG-ACCGGCCTTA 100561294 90232057 10329237 0 0.0247 0.8973 0.1027 0.0000
2 ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1 GTTAGTGCCT-CTGCATAGCA 3744011 3519037 224974 0 0.0009 0.9399 0.0601 0.0000
2 EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1 CGCAATAAGA-CCTACAGCGT 4323321 4045146 278175 0 0.0011 0.9357 0.0643 0.0000
2 FFPE_HD789_01_RNA_0002_B23LG7FLT4_1 TCGGTCTGTT-TGGTTGGTAC 94822764 89572232 5250532 0 0.0233 0.9446 0.0554 0.0000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_3 CTAGACGAGC-GAGGATGGAT 127617155 120171924 7445231 0 0.0313 0.9417 0.0583 0.0000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_3 GTAATACTCG-CTCACGAATC 110333472 100595649 9737823 0 0.0271 0.9117 0.0883 0.0000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3 GATTCTTAGC-TGCTAGCGGT 115642013 109095961 6546052 0 0.0284 0.9434 0.0566 0.0000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_3 TGTGATCGCG-AGACGAGTCT 89585734 83647596 5938138 0 0.0220 0.9337 0.0663 0.0000
2 A673_FFPE_RNA_0001_B23LG7FLT4_3 ATCGAGAGAC-TGGAAGCAGA 77817115 73090421 4726694 0 0.0191 0.9393 0.0607 0.0000
2 BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1 CTGAACGTAT-GCCAATACAT 3751615 3530672 220943 0 0.0009 0.9411 0.0589 0.0000
2 OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1 CACTAGACTT-TGTGGATTAG 1599175 1505577 93598 0 0.0004 0.9415 0.0585 0.0000
2 NTC_0001_0001_B23LG7FLT4_1 CGTCGCCTAT-TATCTTCTCG 214255 198280 15975 0 0.0001 0.9254 0.0746 0.0000
2 Undetermined 285165933 285165933 0 0 0.0700 1.0000 0.0000 0.0000
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