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Adapter_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/bclconvert/L002/Reports/Adapter_Metrics.csv
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7.6 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 12:38 PM

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Lane Sample_ID index index2 ReadNumber AdapterBases SampleBases % Adapter Bases
2 RT4_FFPE_RNA_0001_B23LG7FLT4_1 TCACCGTGGT TCGCTCTGCT 1 0 14492275585 0.000
2 RT4_FFPE_RNA_0001_B23LG7FLT4_1 TCACCGTGGT TCGCTCTGCT 2 0 14492275585 0.000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_1 CAACTACCGC ATGCTGCAGG 1 0 17578069909 0.000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_1 CAACTACCGC ATGCTGCAGG 2 0 17578069909 0.000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_1 ACTCGTCCAG TGGTCCTCGT 1 0 147535909 0.000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_1 ACTCGTCCAG TGGTCCTCGT 2 0 147535909 0.000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_1 TCCGGAGAAC ATTCCTCTGG 1 0 20636577476 0.000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_1 TCCGGAGAAC ATTCCTCTGG 2 0 20636577476 0.000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1 TTGTGAGAAG TTCACTGGCT 1 0 24438988657 0.000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_1 TTGTGAGAAG TTCACTGGCT 2 0 24438988657 0.000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_1 CCGAAGGTTC TCTATCTGAC 1 0 3348751311 0.000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_1 CCGAAGGTTC TCTATCTGAC 2 0 3348751311 0.000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_1 ATACACACCT AGTGTGATAG 1 0 660595857 0.000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_1 ATACACACCT AGTGTGATAG 2 0 660595857 0.000
2 Hs746T_FFPE_RNA_0001_B23LG7FLT4_1 AGCCTCTGCT TTCGCCTTAG 1 0 20429134431 0.000
2 Hs746T_FFPE_RNA_0001_B23LG7FLT4_1 AGCCTCTGCT TTCGCCTTAG 2 0 20429134431 0.000
2 RT4_FFPE_RNA_0001_B23LG7FLT4_2 CGGATCATTA CCGTAACCTT 1 0 14005935389 0.000
2 RT4_FFPE_RNA_0001_B23LG7FLT4_2 CGGATCATTA CCGTAACCTT 2 0 14005935389 0.000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_2 CTCTCTCTAG ACTTGATTGG 1 0 19287496364 0.000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_2 CTCTCTCTAG ACTTGATTGG 2 0 19287496364 0.000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_2 AAGGCTCCAT TGAAGATGGA 1 0 111197608 0.000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_2 AAGGCTCCAT TGAAGATGGA 2 0 111197608 0.000
2 Hs746T_FFPE_RNA_0001_23LG7FLT4_1 CTTGTTACTG AATTCGGTGG 1 0 22837100627 0.000
2 Hs746T_FFPE_RNA_0001_23LG7FLT4_1 CTTGTTACTG AATTCGGTGG 2 0 22837100627 0.000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_2 GATAGATCAG CGTACGCCAT 1 0 21606167502 0.000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_2 GATAGATCAG CGTACGCCAT 2 0 21606167502 0.000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2 GCAGAAGTCT CTGCGTCGAA 1 0 22040695521 0.000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_2 GCAGAAGTCT CTGCGTCGAA 2 0 22040695521 0.000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_2 TATACGATGC CTCCTAATCT 1 0 3357836377 0.000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_2 TATACGATGC CTCCTAATCT 2 0 3357836377 0.000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2 AACGCTCTGA GAGTAACGTG 1 0 586373468 0.000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_2 AACGCTCTGA GAGTAACGTG 2 0 586373468 0.000
2 Hs746T_FFPE_RNA_0001_B23LG7FLT4_2 GATTGGCGAT CTGTCTCATT 1 0 18057478903 0.000
2 Hs746T_FFPE_RNA_0001_B23LG7FLT4_2 GATTGGCGAT CTGTCTCATT 2 0 18057478903 0.000
2 RT4_FFPE_RNA_0001_B23LG7FLT4_3 CAAGACGGAC GTACTCCGTC 1 0 11883112610 0.000
2 RT4_FFPE_RNA_0001_B23LG7FLT4_3 CAAGACGGAC GTACTCCGTC 2 0 11883112610 0.000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_3 CCACTCAACG CCTGTCTAGA 1 0 18151552507 0.000
2 786-O_FFPE_RNA_0001_B23LG7FLT4_3 CCACTCAACG CCTGTCTAGA 2 0 18151552507 0.000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_3 AGCCACTCGT CCAAGAGGAT 1 0 171410217 0.000
2 A549_FFPE_01_RNA_0001_B23LG7FLT4_3 AGCCACTCGT CCAAGAGGAT 2 0 171410217 0.000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_3 GCGAAGAATT TCACGGATGA 1 0 21576224504 0.000
2 U118MG_FFPE_RNA_0001_B23LG7FLT4_3 GCGAAGAATT TCACGGATGA 2 0 21576224504 0.000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3 TGTCGGTGCT AGTTCTTCCG 1 0 21045776906 0.000
2 SK-BR-3_FFPE_01_RNA_0001_B23LG7FLT4_3 TGTCGGTGCT AGTTCTTCCG 2 0 21045776906 0.000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_3 TCTACAGCTA AATGGAAGAC 1 0 3135226590 0.000
2 BT-20_FFPE_RNA_0001_B23LG7FLT4_3 TCTACAGCTA AATGGAAGAC 2 0 3135226590 0.000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_3 CAACCATGAT ATAAGGTGAC 1 0 660234061 0.000
2 22Rv1_FFPE_RNA_0001_B23LG7FLT4_3 CAACCATGAT ATAAGGTGAC 2 0 660234061 0.000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_1 CGCACATTAC TGGAACGTAG 1 0 14600295549 0.000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_1 CGCACATTAC TGGAACGTAG 2 0 14600295549 0.000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_1 ATCTAACCTG CCTGTGGTTC 1 0 16524693758 0.000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_1 ATCTAACCTG CCTGTGGTTC 2 0 16524693758 0.000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1 GCGACAATAT ATTCGTACGG 1 0 23036564832 0.000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1 GCGACAATAT ATTCGTACGG 2 0 23036564832 0.000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_1 TTGCCGTATC ACATTAGCGG 1 0 13745766315 0.000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_1 TTGCCGTATC ACATTAGCGG 2 0 13745766315 0.000
2 A673_FFPE_RNA_0001_B23LG7FLT4_1 GATCCACTTA GTGTTCTGTT 1 0 17786022126 0.000
2 A673_FFPE_RNA_0001_B23LG7FLT4_1 GATCCACTTA GTGTTCTGTT 2 0 17786022126 0.000
2 ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1 TCCGAGATGC TGTCACCTTA 1 0 701260610 0.000
2 ColoN_FFPE_L01_RNA_01_B23LG7FLT4_1 TCCGAGATGC TGTCACCTTA 2 0 701260610 0.000
2 SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1 ATAGAGTTCG GCATAACGGC 1 0 378441183 0.000
2 SkinN_FFPE_L01_RNA_01_B23LG7FLT4_1 ATAGAGTTCG GCATAACGGC 2 0 378441183 0.000
2 FFPE_V4_0001_RNA_0001_B23LG7FLT4_1 GCATTCCTTC GAGCCTGCTT 1 0 10509211326 0.000
2 FFPE_V4_0001_RNA_0001_B23LG7FLT4_1 GCATTCCTTC GAGCCTGCTT 2 0 10509211326 0.000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_2 AATCGTGCGG GTTCAGTAGA 1 0 16703326758 0.000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_2 AATCGTGCGG GTTCAGTAGA 2 0 16703326758 0.000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_2 TACCGGAGCA CTTAGCAGGC 1 0 14650268999 0.000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_2 TACCGGAGCA CTTAGCAGGC 2 0 14650268999 0.000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2 AGCACCAGTC CTCGTGTAGC 1 0 18795509976 0.000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_2 AGCACCAGTC CTCGTGTAGC 2 0 18795509976 0.000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_2 TACCTAGACT GCATTCGAAT 1 0 14342524506 0.000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_2 TACCTAGACT GCATTCGAAT 2 0 14342524506 0.000
2 A673_FFPE_RNA_0001_B23LG7FLT4_2 CAGACTGCAG ACCGGCCTTA 1 0 15184755394 0.000
2 A673_FFPE_RNA_0001_B23LG7FLT4_2 CAGACTGCAG ACCGGCCTTA 2 0 15184755394 0.000
2 ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1 GTTAGTGCCT CTGCATAGCA 1 0 565345661 0.000
2 ColoN_FFPE_L06_RNA_01_B23LG7FLT4_1 GTTAGTGCCT CTGCATAGCA 2 0 565345661 0.000
2 EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1 CGCAATAAGA CCTACAGCGT 1 0 652821471 0.000
2 EndoN_FFPE_L02_RNA_01_B23LG7FLT4_1 CGCAATAAGA CCTACAGCGT 2 0 652821471 0.000
2 FFPE_HD789_01_RNA_0002_B23LG7FLT4_1 TCGGTCTGTT TGGTTGGTAC 1 0 14318237364 0.000
2 FFPE_HD789_01_RNA_0002_B23LG7FLT4_1 TCGGTCTGTT TGGTTGGTAC 2 0 14318237364 0.000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_3 CTAGACGAGC GAGGATGGAT 1 0 19270190405 0.000
2 KG1_FFPE_01_RNA_0003_B23LG7FLT4_3 CTAGACGAGC GAGGATGGAT 2 0 19270190405 0.000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_3 GTAATACTCG CTCACGAATC 1 0 16660354272 0.000
2 MCF7_FFPE_RNA_0001_B23LG7FLT4_3 GTAATACTCG CTCACGAATC 2 0 16660354272 0.000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3 GATTCTTAGC TGCTAGCGGT 1 0 17461943963 0.000
2 NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_3 GATTCTTAGC TGCTAGCGGT 2 0 17461943963 0.000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_3 TGTGATCGCG AGACGAGTCT 1 0 13527445834 0.000
2 SW780_FFPE_RNA_0001_B23LG7FLT4_3 TGTGATCGCG AGACGAGTCT 2 0 13527445834 0.000
2 A673_FFPE_RNA_0001_B23LG7FLT4_3 ATCGAGAGAC TGGAAGCAGA 1 0 11750384365 0.000
2 A673_FFPE_RNA_0001_B23LG7FLT4_3 ATCGAGAGAC TGGAAGCAGA 2 0 11750384365 0.000
2 BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1 CTGAACGTAT GCCAATACAT 1 0 566493865 0.000
2 BreastNP_FFPE_L02_RNA_01_B23LG7FLT4_1 CTGAACGTAT GCCAATACAT 2 0 566493865 0.000
2 OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1 CACTAGACTT TGTGGATTAG 1 0 241475425 0.000
2 OvarianN_FFPE_L03_RNA_01_B23LG7FLT4_1 CACTAGACTT TGTGGATTAG 2 0 241475425 0.000
2 NTC_0001_0001_B23LG7FLT4_1 CGTCGCCTAT TATCTTCTCG 1 0 32352505 0.000
2 NTC_0001_0001_B23LG7FLT4_1 CGTCGCCTAT TATCTTCTCG 2 0 32352505 0.000
2 Undetermined 1 0 43060055883 0.000
2 Undetermined 2 0 43060055883 0.000
99 rows