FastQCFastQC Report
Thu 28 May 2026
ColoN_FFPE_L03_RNA_01_B23LG7FLT4_1_2.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameColoN_FFPE_L03_RNA_01_B23LG7FLT4_1_2.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19058536
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length151
%GC79

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG890686946.73427696649942No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGG3661361.9211129333333892No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGG997280.5232720918332867No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGG571910.30008076171223225No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGGGGGGGGGG410820.2155569556864179No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGGGGGGGGGGG360610.1892118051459986No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)