File Info
- Filename
- A549_FFPE_01_RNA_0001_B23LG7FLT4_3.sample_scores.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/tx2gene_qc/A549_FFPE_01_RNA_0001_B23LG7FLT4_3.sample_scores.tsv
- Size
- 2.8 KB
- Workflow Run
- dev_rna_exp0008_exp0011-e7be3c7a_b
- Published
- May 28, 2026 1:04 PM
Content
View in new tab| sample_id | category | signature | score_log2tpm1_mean | n_present | n_in_signature_targeted |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | Angiogenesis_VEGF | 0.0 | 9 | 9 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | BMP_signaling | 0.667 | 13 | 13 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | Cell_cycle | 0.0 | 15 | 15 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | Hedgehog_signaling | 0.0 | 10 | 10 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | Hippo_signaling | 0.0 | 13 | 13 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | Homologous_recombination_repair | 0.738 | 33 | 33 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | Hormone_receptor_signaling | 0.0 | 8 | 8 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | JAK_STAT | 0.0 | 11 | 11 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | MSI_MMR | 0.809 | 23 | 23 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | MYC_signaling | 0.0 | 5 | 5 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | Metastasis_EMT | 0.0 | 39 | 39 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | NFkB_signaling | 0.0 | 10 | 10 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | NOTCH_signaling | 0.0 | 27 | 27 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | PI3K_AKT_mTOR | 0.0 | 18 | 18 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | RTK_MAPK_signaling | 0.0 | 32 | 32 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | TGFb_signaling | 0.0 | 13 | 13 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | WNT_signaling | 0.0 | 38 | 38 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | cancer | p53_pathway | 0.0 | 7 | 7 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | housekeeping | Housekeeping_core_minimal | 1.768 | 10 | 10 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | housekeeping | Housekeeping_normalization | 0.884 | 20 | 20 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | sex_chromosome | chry_signature | 0.0 | 5 | 5 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Bladder | 0.0 | 12 | 12 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Brain_Glioma | 0.0 | 9 | 9 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Breast | 0.0 | 13 | 13 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Breast_Basal_like_TNBC | 0.0 | 8 | 8 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Breast_HER2_enriched | 0.0 | 9 | 9 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Breast_Luminal_A | 0.0 | 10 | 10 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Breast_Luminal_B | 0.0 | 11 | 11 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Colorectal | 0.0 | 13 | 13 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Endometrial | 0.0 | 9 | 9 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Kidney_ClearCell | 0.0 | 8 | 8 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Liver | 0.0 | 10 | 10 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Lung_Adenocarcinoma | 0.0 | 9 | 9 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Lung_Squamous | 0.0 | 7 | 7 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Melanoma | 0.0 | 7 | 7 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Neuroendocrine | 0.0 | 8 | 8 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Ovary | 0.0 | 8 | 8 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Pancreas | 0.0 | 10 | 10 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Prostate | 0.0 | 7 | 7 |
| A549_FFPE_01_RNA_0001_B23LG7FLT4_3 | tissue_origin | Upper_Urinary_Tract | 0.0 | 11 | 11 |
41 rows