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A673_FFPE_RNA_0001_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/fusioninspector/A673_FFPE_RNA_0001_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
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7.8 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 4:59 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
EWSR1--FLI1 6001 13 6001.00 12.95 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 37165 chr11:128805366:+ ONLY_REF_SPLICE YES 3178 132 1.89 45.23 GT 1.8062 AG 1.7819 20.3727 1466 0
EWSR1--FLI1 90 1 90.00 0.01 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 40039 chr11:128809157:+ ONLY_REF_SPLICE YES 3178 1363 0.03 0.07 GT 1.8062 AG 1.9329 0.3049 1609 0
EWSR1--FLI1 41 2 41.00 0.01 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 38979 chr11:128807180:+ ONLY_REF_SPLICE YES 3178 752 0.01 0.06 GT 1.8062 AG 1.8062 0.1389 1231 0
EWSR1--FLI1 6 13 6.00 0.01 EWSR1^ENSG00000182944.18 16555 chr22:29292606:+ FLI1^ENSG00000151702.17 33527 chr11:128772904:+ INCL_NON_REF_SPLICE NO 4392 0 0.00 20.00 GT 1.4295 AA 1.6895 0.0203 1475 0
EWSR1--FLI1 5 9 5.00 0.01 EWSR1^ENSG00000182944.18 11540 chr22:29287120:+ FLI1^ENSG00000151702.17 37164 chr11:128805365:+ INCL_NON_REF_SPLICE YES 3539 129 0.00 0.12 CT 1.5656 TA 1.9086 0.0169 1465 0
EWSR1--FLI1 1 0 1.00 0.00 EWSR1^ENSG00000182944.18 9174 chr22:29278216:+ FLI1^ENSG00000151702.17 37165 chr11:128805366:+ ONLY_REF_SPLICE YES 3153 132 0.00 0.02 GT 1.8323 AG 1.7819 0.0034 1110 0
PCDHA6--PCDHAC1 471 3 235.50 1.50 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC1^ENSG00000248383.5 12415 chr5:140978949:+ INCL_NON_REF_SPLICE YES 74 93 6.33 5.05 GT 1.9219 AG 1.3996 0.8029 1175 0
PCDHA6--PCDHAC1 13 0 6.50 0.00 PCDHA6^ENSG00000081842.18 2736 chr5:140829693:+ PCDHAC1^ENSG00000248383.5 12415 chr5:140978949:+ INCL_NON_REF_SPLICE YES 507 93 0.03 0.15 GT 1.9329 AG 1.3996 0.022 1433 0
PCDHA6--PCDHAC1 9 0 4.50 0.00 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC1^ENSG00000248383.5 14563 chr5:141009627:+ INCL_NON_REF_SPLICE YES 74 525 0.13 0.02 GT 1.9219 AG 1.5219 0.0152 638 0
PCDHA6--PCDHAC2 471 3 235.50 1.50 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC2^ENSG00000243232.6 11279 chr5:140978949:+ INCL_NON_REF_SPLICE YES 74 311 6.33 1.52 GT 1.9219 AG 1.3996 0.8029 1069 0
PCDHA6--PCDHAC2 13 0 6.50 0.00 PCDHA6^ENSG00000081842.18 2736 chr5:140829693:+ PCDHAC2^ENSG00000243232.6 11279 chr5:140978949:+ INCL_NON_REF_SPLICE YES 507 311 0.03 0.04 GT 1.9329 AG 1.3996 0.022 1106 0
PCDHA6--PCDHAC2 9 0 4.50 0.00 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC2^ENSG00000243232.6 15289 chr5:141009627:+ INCL_NON_REF_SPLICE YES 74 599 0.13 0.02 GT 1.9219 AG 1.5219 0.0152 638 0
SMURF2P1--SP2 366 1 366.00 0.99 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ SP2^ENSG00000167182.15 13324 chr17:47915312:+ ONLY_REF_SPLICE YES 0 296 368.00 1.24 GT 1.7819 AG 1.7056 1.2432 2882 0
SMURF2P1--SP2 2 1 2.00 0.01 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ SP2^ENSG00000167182.15 12738 chr17:47914726:+ ONLY_REF_SPLICE YES 0 180 4.00 0.02 GT 1.7819 AG 1.7819 0.0068 3270 0
SMURF2P1--SP2 2 1 2.00 0.01 SMURF2P1^ENSG00000248121.8 5305 chr17:30615980:+ SP2^ENSG00000167182.15 13324 chr17:47915312:+ ONLY_REF_SPLICE YES 0 296 4.00 0.01 GT 1.8892 AG 1.7056 0.0068 3802 0
SMURF2P1--SP2 1 0 1.00 0.00 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ SP2^ENSG00000167182.15 16869 chr17:47922962:+ ONLY_REF_SPLICE YES 0 333 2.00 0.01 GT 1.7819 AG 1.9219 0.0034 2910 0
PCDHGB2--PCDHGA10 190 1 23.75 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 18 192.00 10.11 GT 1.7819 AG 1.3383 0.0809 1890 0
PCDHGB2--PCDHGA11 190 1 23.75 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 542 192.00 0.35 GT 1.7819 AG 1.3383 0.0809 1018 0
PCDHGB2--PCDHGA12 190 1 23.75 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 5 192.00 32.00 GT 1.7819 AG 1.3383 0.0809 1413 0
PCDHGB2--PCDHGA8 190 1 23.75 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 8 192.00 21.33 GT 1.7819 AG 1.3383 0.0809 1419 0
PCDHGB2--PCDHGA9 190 1 23.75 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 17 192.00 10.67 GT 1.7819 AG 1.3383 0.0809 1493 0
PCDHGB2--PCDHGC3 190 1 23.75 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 862 192.00 0.22 GT 1.7819 AG 1.3383 0.0809 1210 0
PCDHGB2--PCDHGC4 190 1 23.75 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 6 192.00 27.43 GT 1.7819 AG 1.3383 0.0809 1585 0
PCDHGB2--PCDHGC4 3 1 3.00 0.02 PCDHGB2^ENSG00000253910.2 3510 chr5:141362551:+ PCDHGC4^ENSG00000242419.5 10378 chr5:141494803:+ INCL_NON_REF_SPLICE YES 0 6 5.00 0.71 TG 1.8062 CC 1.4566 0.0103 1580 0
PCDHGB2--PCDHGC5 190 1 23.75 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 23 192.00 8.00 GT 1.7819 AG 1.3383 0.0809 1206 0
SUPT20H--CHRDL2 82 0 82.00 0.00 SUPT20H^ENSG00000102710.20 1155 chr13:37059559:- CHRDL2^ENSG00000054938.16 46703 chr11:74697297:- ONLY_REF_SPLICE YES 563 47 0.15 1.73 GT 1.5656 AG 1.9329 0.2778 5352 0
SUPT20H--CHRDL2 24 0 24.00 0.00 SUPT20H^ENSG00000102710.20 1234 chr13:37059480:- CHRDL2^ENSG00000054938.16 46703 chr11:74697297:- ONLY_REF_SPLICE YES 607 47 0.04 0.52 GT 1.7465 AG 1.9329 0.0813 5278 0
SUPT20H--CHRDL2 3 0 3.00 0.00 SUPT20H^ENSG00000102710.20 1172 chr13:37059542:- CHRDL2^ENSG00000054938.16 46703 chr11:74697297:- INCL_NON_REF_SPLICE YES 564 47 0.01 0.08 GT 1.4256 AG 1.9329 0.0102 5336 0
CCDC169--SOHLH2 80 0 80.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 43 0 1.84 81.00 GT 1.8295 AG 1.7232 0.271 1362 0
CCDC169--SOHLH2 1 0 1.00 0.00 CCDC169^ENSG00000242715.8 3518 chr13:36283469:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 110 0 0.02 2.00 GT 1.9086 AG 1.7232 0.0034 1270 0
CYP7B1--LINC01414 59 0 59.00 0.00 CYP7B1^ENSG00000172817.4 1272 chr8:64798466:- LINC01414^ENSG00000253554.7 33162 chr8:63687231:- ONLY_REF_SPLICE YES 208 0 0.29 60.00 GT 1.8323 AG 1.6895 0.1999 5396 0
CYP7B1--LINC01414 1 0 1.00 0.00 CYP7B1^ENSG00000172817.4 1272 chr8:64798466:- LINC01414^ENSG00000253554.7 31927 chr8:63729008:- ONLY_REF_SPLICE YES 208 0 0.01 2.00 GT 1.8323 AG 1.9329 0.0034 4491 0
TLK2--AC240565.1 46 0 46.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 428 32 0.11 1.42 GT 1.8892 AG 1.8892 0.1558 1734 0
AC096555.1--PCSK2 15 0 15.00 0.00 AC096555.1^ENSG00000286152.1 2446 chr2:184057832:- PCSK2^ENSG00000125851.10 15954 chr20:17409263:+ ONLY_REF_SPLICE YES 0 1718 16.00 0.01 GT 1.9656 AG 1.8892 0.0508 4422 0
SOGA3--KIAA0408 11 1 11.00 1.00 SOGA3^ENSG00000214338.10 11088 chr6:127473080:- KIAA0408^ENSG00000189367.15 15731 chr6:127454101:- INCL_NON_REF_SPLICE YES 0 29 13.00 0.43 GT 1.6895 AG 1.7465 0.0407 176 0
SOGA3--KIAA0408 4 0 4.00 0.00 SOGA3^ENSG00000214338.10 9776 chr6:127475293:- KIAA0408^ENSG00000189367.15 19482 chr6:127447740:- ONLY_REF_SPLICE YES 536 780 0.01 0.01 GT 1.9656 AG 1.9329 0.0136 575 0
SOGA3--KIAA0408 1 0 1.00 0.00 SOGA3^ENSG00000214338.10 9776 chr6:127475293:- KIAA0408^ENSG00000189367.15 15731 chr6:127454101:- ONLY_REF_SPLICE YES 536 29 0.00 0.07 GT 1.9656 AG 1.7465 0.0034 1093 0
IGH-@-ext--SPG7 6 0 6.00 0.00 IGH-@-ext^IGH-.g@-ext 1292288 chr14:106875018:+ SPG7^ENSG00000197912.16 1314799 chr16:89526329:+ INCL_NON_REF_SPLICE YES 0 439 7.00 0.02 GT 1.9656 AG 1.9329 0.0203 879 0
39 rows