#==================================================
#All numbers are READ count
#==================================================

Total records:                          1049870061

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        457932715
Unmapped reads:                         9287118
mapq < mapq_cut (non-unique):           89900414

mapq >= mapq_cut (unique):              492749814
Read-1:                                 246655100
Read-2:                                 246094714
Reads map to '+':                       246397410
Reads map to '-':                       246352404
Non-splice reads:                       348918678
Splice reads:                           143831136
Reads mapped in proper pairs:           490872518
Proper-paired reads map to different chrom:0