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Filename
786-O_FFPE_RNA_0001_B23LG7FLT4_2.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/fusioninspector/786-O_FFPE_RNA_0001_B23LG7FLT4_2.FusionInspector.fusions.abridged.tsv
Size
10.2 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 5:02 PM

Content

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHGB2--PCDHGA9 2375 6 1506.81 3.80 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 703 2382.00 3.38 GT 1.7819 AG 1.3383 5.1229 1493 0
PCDHGB2--PCDHGC4 2373 6 538.96 1.36 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 6 2380.00 340.00 GT 1.7819 AG 1.3383 1.8324 1585 0
PCDHGB2--PCDHGA10 2372 6 55.04 0.14 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 20 2379.00 113.29 GT 1.7819 AG 1.3383 0.1872 1890 0
PCDHGB2--PCDHGA10 3 6 3.00 0.01 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 6617 chr5:141413015:+ INCL_NON_REF_SPLICE NO 0 4 10.00 2.00 GT 1.7819 CA 1.2729 0.0102 927 0
PCDHGB2--PCDHGA11 2372 6 55.04 0.14 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 2379.00 793.00 GT 1.7819 AG 1.3383 0.1872 1018 0
PCDHGB2--PCDHGA12 2372 6 55.04 0.14 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 2379.00 793.00 GT 1.7819 AG 1.3383 0.1872 1413 0
PCDHGB2--PCDHGA8 2372 6 55.04 0.14 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 6 2379.00 339.86 GT 1.7819 AG 1.3383 0.1872 1419 0
PCDHGB2--PCDHGC3 2372 6 55.04 0.14 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4040 2379.00 0.59 GT 1.7819 AG 1.3383 0.1872 1210 0
PCDHGB2--PCDHGC5 2372 6 55.04 0.14 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 41 2379.00 56.64 GT 1.7819 AG 1.3383 0.1872 1206 0
CENPU--ENPP6 329 12 329.00 12.00 CENPU^ENSG00000151725.12 8904 chr4:184712944:- ENPP6^ENSG00000164303.11 24241 chr4:184153733:- ONLY_REF_SPLICE YES 576 41 0.59 8.14 GT 1.9329 AG 1.9656 1.1564 149 0
CENPU--ENPP6 18 0 18.00 0.00 CENPU^ENSG00000151725.12 6906 chr4:184716397:- ENPP6^ENSG00000164303.11 24241 chr4:184153733:- ONLY_REF_SPLICE YES 679 41 0.03 0.45 GT 1.8295 AG 1.9656 0.061 1965 0
CENPU--ENPP6 2 0 2.00 0.00 CENPU^ENSG00000151725.12 8904 chr4:184712944:- ENPP6^ENSG00000164303.11 25421 chr4:184124272:- ONLY_REF_SPLICE YES 576 355 0.01 0.01 GT 1.9329 AG 1.7465 0.0068 1024 0
HIF1A--SNAPC1 197 2 197.00 2.00 HIF1A^ENSG00000100644.17 15201 chr14:61741188:+ SNAPC1^ENSG00000023608.5 23810 chr14:61766876:+ ONLY_REF_SPLICE YES 3604 725 0.06 0.28 GT 1.9899 AG 1.6895 0.6749 2372 0
HIF1A--SNAPC1 2 0 2.00 0.00 HIF1A^ENSG00000100644.17 16310 chr14:61744813:+ SNAPC1^ENSG00000023608.5 31637 chr14:61794949:+ ONLY_REF_SPLICE YES 3909 535 0.00 0.01 GT 1.8892 AG 1.9329 0.0068 935 0
HIF1A--SNAPC1 1 0 1.00 0.00 HIF1A^ENSG00000100644.17 14640 chr14:61740627:+ SNAPC1^ENSG00000023608.5 23810 chr14:61766876:+ ONLY_REF_SPLICE YES 3180 725 0.00 0.00 GT 1.7819 AG 1.6895 0.0034 1812 0
HIF1A--SNAPC1 1 0 1.00 0.00 HIF1A^ENSG00000100644.17 13073 chr14:61738373:+ SNAPC1^ENSG00000023608.5 23810 chr14:61766876:+ ONLY_REF_SPLICE YES 2784 725 0.00 0.00 GT 1.9656 AG 1.6895 0.0034 270 0
HIF1A--SNAPC1 1 0 1.00 0.00 HIF1A^ENSG00000100644.17 1327 chr14:61695839:+ SNAPC1^ENSG00000023608.5 23810 chr14:61766876:+ ONLY_REF_SPLICE YES 1686 725 0.00 0.00 GT 1.2419 AG 1.6895 0.0034 5830 0
LMNA--MEX3A 196 1 196.00 0.92 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ MEX3A^ENSG00000254726.3 29334 chr1:156077682:- ONLY_REF_SPLICE YES 5583 372 0.04 0.53 GT 1.7465 AG 1.9086 0.6678 584 0
LMNA--MEX3A 18 1 18.00 0.08 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ MEX3A^ENSG00000254726.3 27867 chr1:156082011:- INCL_NON_REF_SPLICE YES 5583 118 0.00 0.17 GT 1.7465 AG 1.6402 0.0613 127 0
DHX38--AMPD1 177 0 177.00 0.00 DHX38^ENSG00000140829.12 3713 chr16:72097009:+ AMPD1^ENSG00000116748.21 23594 chr1:114688741:- ONLY_REF_SPLICE YES 124 81 1.42 2.17 GT 1.4295 AG 1.7465 0.6003 230 0
DHX38--AMPD1 158 0 158.00 0.00 DHX38^ENSG00000140829.12 4485 chr16:72097781:+ AMPD1^ENSG00000116748.21 23594 chr1:114688741:- ONLY_REF_SPLICE YES 355 81 0.45 1.94 GT 1.8892 AG 1.7465 0.5358 277 0
DHX38--AMPD1 1 0 1.00 0.00 DHX38^ENSG00000140829.12 3713 chr16:72097009:+ AMPD1^ENSG00000116748.21 26155 chr1:114684364:- ONLY_REF_SPLICE YES 124 242 0.02 0.01 GT 1.4295 AG 1.8256 0.0034 2524 0
TMED7--TICAM2 125 2 125.00 1.84 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1128 219 0.11 0.58 GT 1.9329 AG 1.6729 0.4301 331 0
TMED7--TICAM2 20 0 20.00 0.00 TMED7^ENSG00000134970.14 3819 chr5:115620435:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- ONLY_REF_SPLICE YES 1094 219 0.02 0.10 GT 1.9656 AG 1.6729 0.0678 1185 0
TMED7--TICAM2 14 1 14.00 0.10 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13166 chr5:115581197:- INCL_NON_REF_SPLICE YES 1128 605 0.01 0.03 GT 1.9329 AG 1.9656 0.0478 213 0
TMED7--TICAM2 3 3 3.00 1.06 TMED7^ENSG00000134970.14 4989 chr5:115616276:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1026 219 0.01 0.03 GC 1.7465 AG 1.6729 0.0138 331 0
TLK2--AC240565.1 99 2 99.00 2.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 515 22 0.20 4.43 GT 1.8892 AG 1.8892 0.3425 1734 0
TVP23C--CDRT4 93 0 93.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 85 11 1.09 7.83 GT 1.9329 AG 1.9899 0.3154 1215 0
TVP23C--CDRT4 90 0 90.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 627 11 0.14 7.58 GT 1.8323 AG 1.9899 0.3052 2126 0
TVP23C--CDRT4 23 0 23.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 85 35 0.28 0.67 GT 1.9329 AG 1.6402 0.078 137 0
TVP23C--CDRT4 23 0 23.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 627 35 0.04 0.67 GT 1.8323 AG 1.6402 0.078 1363 0
TVP23C--CDRT4 8 0 8.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 57 11 0.16 0.75 GT 1.8892 AG 1.9899 0.0271 1949 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 265 11 0.02 0.42 GT 1.9086 AG 1.9899 0.0136 1774 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 265 35 0.02 0.11 GT 1.9086 AG 1.6402 0.0102 697 0
BNC2--AL358117.1 75 2 75.00 1.84 BNC2^ENSG00000173068.18 6884 chr9:16704753:- AL358117.1^ENSG00000285169.2 32938 chr9:16988744:- ONLY_REF_SPLICE YES 735 1 0.11 39.00 GT 1.8892 AG 1.8062 0.2605 1281 0
BNC2--AL358117.1 14 1 14.00 0.16 BNC2^ENSG00000173068.18 5554 chr9:16727797:- AL358117.1^ENSG00000285169.2 32938 chr9:16988744:- ONLY_REF_SPLICE YES 151 1 0.11 8.00 GT 1.8892 AG 1.8062 0.048 2499 0
GUSBP13--NAIP 74 1 74.00 1.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 14552 chr5:71003857:- ONLY_REF_SPLICE YES 0 35 76.00 2.11 GT 1.9329 AG 1.8295 0.2544 2864 0
GUSBP13--NAIP 8 0 8.00 0.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 21403 chr5:70985886:- ONLY_REF_SPLICE YES 0 158 9.00 0.06 GT 1.9329 AG 1.8323 0.0271 1351 0
GUSBP13--NAIP 5 0 5.00 0.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 19415 chr5:70987874:- ONLY_REF_SPLICE YES 0 82 6.00 0.07 GT 1.9329 AG 1.6895 0.017 2097 0
GUSBP13--NAIP 2 0 2.00 0.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 24515 chr5:70980036:- ONLY_REF_SPLICE YES 0 182 3.00 0.02 GT 1.9329 AG 1.5850 0.0068 1912 0
GUSBP13--NAIP 1 0 1.00 0.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 16266 chr5:71002143:- ONLY_REF_SPLICE YES 0 42 2.00 0.05 GT 1.9329 AG 1.8256 0.0034 4476 0
ZKSCAN7--KIF15 46 0 46.00 0.00 ZKSCAN7^ENSG00000196345.13 7346 chr3:44570665:+ KIF15^ENSG00000163808.17 34746 chr3:44814911:+ ONLY_REF_SPLICE YES 16 161 2.76 0.29 GT 1.9656 AG 1.5850 0.156 1082 0
ZKSCAN7--KIF15 5 0 5.00 0.00 ZKSCAN7^ENSG00000196345.13 5558 chr3:44568433:+ KIF15^ENSG00000163808.17 36248 chr3:44826375:+ ONLY_REF_SPLICE YES 44 164 0.13 0.04 GT 1.8256 AG 1.8062 0.017 1900 0
ZKSCAN7--KIF15 1 0 1.00 0.00 ZKSCAN7^ENSG00000196345.13 2867 chr3:44557470:+ KIF15^ENSG00000163808.17 35912 chr3:44826039:+ ONLY_REF_SPLICE YES 61 132 0.03 0.02 GT 1.6895 AG 1.5546 0.0034 643 0
AC008969.1--SMARCA4 26 0 26.00 0.00 AC008969.1^ENSG00000176593.8 1986 chr19:58003046:+ SMARCA4^ENSG00000127616.19 25959 chr19:10994828:+ ONLY_REF_SPLICE YES 1 625 13.50 0.04 GT 1.9086 AG 1.8892 0.0882 1403 0
AC008969.1--SMARCA4 10 2 10.00 1.67 AC008969.1^ENSG00000176593.8 2276 chr19:58003336:+ SMARCA4^ENSG00000127616.19 25959 chr19:10994828:+ ONLY_REF_SPLICE YES 2 625 4.33 0.02 GT 1.6729 AG 1.8892 0.0396 1160 0
AC008969.1--SMARCA4 2 2 2.00 0.33 AC008969.1^ENSG00000176593.8 3640 chr19:58004700:+ SMARCA4^ENSG00000127616.19 25959 chr19:10994828:+ ONLY_REF_SPLICE YES 1 625 2.50 0.01 GT 1.8323 AG 1.8892 0.0079 812 0
CCDC169--SOHLH2 20 0 20.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 36 1 0.57 10.50 GT 1.8295 AG 1.7232 0.0678 1362 0
ARHGEF3--RRP9 15 0 15.00 0.00 ARHGEF3^ENSG00000163947.12 4019 chr3:57035088:- RRP9^ENSG00000114767.7 32482 chr3:51941491:- ONLY_REF_SPLICE YES 98 63 0.16 0.25 GT 1.1589 AG 1.6895 0.0509 3389 0
ARHGEF3--RRP9 4 0 4.00 0.00 ARHGEF3^ENSG00000163947.12 4019 chr3:57035088:- RRP9^ENSG00000114767.7 33565 chr3:51938204:- ONLY_REF_SPLICE YES 98 356 0.05 0.01 GT 1.1589 AG 1.9086 0.0136 2982 0
ARHGEF3--RRP9 1 0 1.00 0.00 ARHGEF3^ENSG00000163947.12 1783 chr3:57078547:- RRP9^ENSG00000114767.7 32482 chr3:51941491:- ONLY_REF_SPLICE YES 51 63 0.04 0.03 GT 1.5656 AG 1.6895 0.0034 1864 0
52 rows