[W::hts_idx_load3] The index file is older than the data file: SkinN_FFPE_L09_RNA_01_B23LG7FLT4_1.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	162196724
Known Splicing Events:	160283270
Partial Novel Splicing Events:	964339
Novel Splicing Events:	841923
Filtered Splicing Events:	107192

Total splicing  Junctions:	261971
Known Splicing Junctions:	196419
Partial Novel Splicing Junctions:	35129
Novel Splicing Junctions:	30423

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Create BED file ...
Create Interact file ...