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Filename
KG1_FFPE_01_RNA_0003_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/fusioninspector/KG1_FFPE_01_RNA_0003_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
Size
8.9 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 5:04 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
FGFR1OP2--FGFR1 2001 32 2001.00 32.00 FGFR1OP2^ENSG00000111790.14 5187 chr12:26957743:+ FGFR1^ENSG00000077782.21 37764 chr8:38418373:- ONLY_REF_SPLICE YES 433 458 4.69 4.43 GT 1.8256 AG 1.8256 6.8868 159 0
FGFR1OP2--FGFR1 1 0 1.00 0.00 FGFR1OP2^ENSG00000111790.14 1241 chr12:26938710:+ FGFR1^ENSG00000077782.21 37764 chr8:38418373:- ONLY_REF_SPLICE YES 1114 458 0.00 0.00 GT 1.7056 AG 1.8256 0.0034 1618 0
FGFR1OP2--FGFR1 1 0 1.00 0.00 FGFR1OP2^ENSG00000111790.14 4104 chr12:26956660:+ FGFR1^ENSG00000077782.21 37764 chr8:38418373:- ONLY_REF_SPLICE YES 1238 458 0.00 0.00 GT 1.1033 AG 1.8256 0.0034 964 0
RBM14--RBM4 1139 15 1139.00 14.29 RBM14^ENSG00000239306.5 1432 chr11:66617057:+ RBM4^ENSG00000173933.21 16040 chr11:66639700:+ ONLY_REF_SPLICE YES 1302 1045 0.89 1.10 GT 1.7465 AG 1.9086 3.9068 80 1
RBM14--RBM4 79 3 79.00 0.18 RBM14^ENSG00000239306.5 1432 chr11:66617057:+ RBM4^ENSG00000173933.21 20827 chr11:66646027:+ ONLY_REF_SPLICE YES 1302 1524 0.06 0.05 GT 1.7465 AG 1.2310 0.2682 156 0
RBM14--RBM4 20 15 20.00 0.25 RBM14^ENSG00000239306.5 1432 chr11:66617057:+ RBM4^ENSG00000173933.21 16018 chr11:66639678:+ INCL_NON_REF_SPLICE YES 1302 922 0.03 0.04 GT 1.7465 AG 1.4256 0.0686 100 0
RBM14--RBM4 19 4 19.00 0.06 RBM14^ENSG00000239306.5 1432 chr11:66617057:+ RBM4^ENSG00000173933.21 18533 chr11:66643450:+ ONLY_REF_SPLICE YES 1302 2103 0.02 0.01 GT 1.7465 AG 1.8062 0.0646 648 0
RBM14--RBM4 11 16 11.00 1.15 RBM14^ENSG00000239306.5 7750 chr11:66625678:+ RBM4^ENSG00000173933.21 16040 chr11:66639700:+ ONLY_REF_SPLICE YES 741 1045 0.04 0.03 GT 1.9329 AG 1.9086 0.0412 1067 0
RBM14--RBM4 12 0 12.00 0.00 RBM14^ENSG00000239306.5 1432 chr11:66617057:+ RBM4^ENSG00000173933.21 24560 chr11:66665856:+ ONLY_REF_SPLICE YES 1302 594 0.01 0.02 GT 1.7465 AG 1.9086 0.0407 1233 0
RBM14--RBM4 4 15 4.00 0.05 RBM14^ENSG00000239306.5 6396 chr11:66624324:+ RBM4^ENSG00000173933.21 16040 chr11:66639700:+ ONLY_REF_SPLICE YES 1722 1045 0.01 0.02 GT 1.8323 AG 1.9086 0.0138 202 0
RBM14--RBM4 1 15 1.00 0.01 RBM14^ENSG00000239306.5 1925 chr11:66617550:+ RBM4^ENSG00000173933.21 16040 chr11:66639700:+ ONLY_REF_SPLICE YES 1077 1045 0.02 0.02 GT 1.8892 AG 1.9086 0.0034 534 0
RBM14--RBM4 1 4 1.00 0.00 RBM14^ENSG00000239306.5 7750 chr11:66625678:+ RBM4^ENSG00000173933.21 18533 chr11:66643450:+ ONLY_REF_SPLICE YES 741 2103 0.01 0.00 GT 1.9329 AG 1.8062 0.0034 393 0
BCAT1--AC023796.2 278 1 278.00 1.00 BCAT1^ENSG00000060982.15 1175 chr12:24948927:- AC023796.2^ENSG00000256482.1 28610 chr12:24830701:+ INCL_NON_REF_SPLICE YES 1820 12 0.15 21.54 GT 1.6895 AG 1.3383 0.9451 10000 0
BCAT1--AC023796.2 39 0 39.00 0.00 BCAT1^ENSG00000060982.15 1175 chr12:24948927:- AC023796.2^ENSG00000256482.1 29699 chr12:24836477:+ ONLY_REF_SPLICE YES 1820 15 0.02 2.50 GT 1.6895 AG 1.9086 0.1321 10000 0
GUSBP2--NAIP 131 0 131.00 0.00 GUSBP2^ENSG00000241549.8 9027 chr6:26878700:- NAIP^ENSG00000249437.8 20492 chr5:71003857:- ONLY_REF_SPLICE YES 38 106 3.38 1.23 GT 1.9329 AG 1.8295 0.4438 366 0
GUSBP2--NAIP 24 0 24.00 0.00 GUSBP2^ENSG00000241549.8 9404 chr6:26878323:- NAIP^ENSG00000249437.8 20492 chr5:71003857:- INCL_NON_REF_SPLICE YES 13 106 1.79 0.23 GT 1.9086 AG 1.8295 0.0813 279 0
AMN1--WIF1 121 0 121.00 0.00 AMN1^ENSG00000151743.11 8399 chr12:31697361:- WIF1^ENSG00000156076.10 22097 chr12:65062576:- ONLY_REF_SPLICE YES 149 3 0.81 30.50 GT 1.6895 AG 1.7056 0.4099 3015 0
ST7--TFEC 118 8 118.00 7.61 ST7^ENSG00000004866.22 1454 chr7:116953691:+ TFEC^ENSG00000105967.16 43030 chr7:116112038:- ONLY_REF_SPLICE YES 369 32 0.34 3.85 GT 1.8892 AG 1.9086 0.4255 3333 0
ST7--TFEC 30 2 30.00 0.39 ST7^ENSG00000004866.22 1454 chr7:116953691:+ TFEC^ENSG00000105967.16 46477 chr7:115984513:- ONLY_REF_SPLICE YES 369 1189 0.09 0.03 GT 1.8892 AG 1.8295 0.1029 2424 0
ST7--TFEC 9 0 9.00 0.00 ST7^ENSG00000004866.22 1454 chr7:116953691:+ TFEC^ENSG00000105967.16 49945 chr7:115956793:- ONLY_REF_SPLICE YES 369 1173 0.03 0.01 GT 1.8892 AG 1.7465 0.0305 3780 0
ST7--TFEC 1 0 1.00 0.00 ST7^ENSG00000004866.22 1454 chr7:116953691:+ TFEC^ENSG00000105967.16 47729 chr7:115974256:- ONLY_REF_SPLICE YES 369 996 0.01 0.00 GT 1.8892 AG 1.8256 0.0034 2693 0
PPP1R9A--XRCC2 81 4 81.00 3.83 PPP1R9A^ENSG00000158528.12 15374 chr7:95252130:+ XRCC2^ENSG00000196584.3 35514 chr7:152660782:- ONLY_REF_SPLICE YES 120 457 0.71 0.19 GT 1.9656 AG 1.6895 0.2874 3189 0
PPP1R9A--XRCC2 5 3 5.00 0.17 PPP1R9A^ENSG00000158528.12 15374 chr7:95252130:+ XRCC2^ENSG00000196584.3 36596 chr7:152649363:- ONLY_REF_SPLICE YES 120 625 0.07 0.01 GT 1.9656 AG 1.7465 0.0175 2612 0
CCDC169--SOHLH2 75 3 75.00 2.88 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 130 7 0.60 9.88 GT 1.8295 AG 1.7232 0.2639 1362 0
CCDC169--SOHLH2 3 3 3.00 0.12 CCDC169^ENSG00000242715.8 14978 chr13:36227199:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- INCL_NON_REF_SPLICE YES 96 7 0.07 0.88 GT 1.8295 AG 1.7232 0.0106 93 1
GRIA3--STAG2 51 2 51.00 1.02 GRIA3^ENSG00000125675.19 7670 chrX:123326213:+ STAG2^ENSG00000101972.19 35940 chrX:124022531:+ ONLY_REF_SPLICE YES 35 7 1.50 6.75 GT 1.8892 AG 1.8256 0.1763 2763 0
GRIA3--STAG2 49 2 49.00 0.98 GRIA3^ENSG00000125675.19 7670 chrX:123326213:+ STAG2^ENSG00000101972.19 34875 chrX:124021367:+ ONLY_REF_SPLICE YES 35 0 1.44 52.00 GT 1.8892 AG 1.9086 0.1693 2689 0
PCDHGB2--PCDHGA10 44 0 5.50 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 17 45.00 2.50 GT 1.7819 AG 1.3383 0.0186 1890 0
PCDHGB2--PCDHGA11 44 0 5.50 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 3 45.00 11.25 GT 1.7819 AG 1.3383 0.0186 1018 0
PCDHGB2--PCDHGA12 44 0 5.50 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 45.00 45.00 GT 1.7819 AG 1.3383 0.0186 1413 0
PCDHGB2--PCDHGA8 44 0 5.50 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 45.00 15.00 GT 1.7819 AG 1.3383 0.0186 1419 0
PCDHGB2--PCDHGA9 44 0 5.50 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 45.00 45.00 GT 1.7819 AG 1.3383 0.0186 1493 0
PCDHGB2--PCDHGC3 44 0 5.50 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 45.00 15.00 GT 1.7819 AG 1.3383 0.0186 1210 0
PCDHGB2--PCDHGC4 44 0 5.50 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 45.00 45.00 GT 1.7819 AG 1.3383 0.0186 1585 0
PCDHGB2--PCDHGC5 44 0 5.50 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 45.00 45.00 GT 1.7819 AG 1.3383 0.0186 1206 0
TVP23C--CDRT4 30 0 30.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 43 0 0.70 31.00 GT 1.9329 AG 1.9899 0.1016 1215 0
TVP23C--CDRT4 12 0 12.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 204 0 0.06 13.00 GT 1.8323 AG 1.9899 0.0407 2126 0
TVP23C--CDRT4 9 0 9.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 204 11 0.05 0.83 GT 1.8323 AG 1.6402 0.0305 1363 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 43 11 0.11 0.42 GT 1.9329 AG 1.6402 0.0136 137 0
PCDHA4--PCDHAC1 19 0 9.50 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC1^ENSG00000248383.5 19813 chr5:140978949:+ ONLY_REF_SPLICE YES 15 4 1.25 4.00 GT 1.9656 AG 1.3996 0.0322 1304 0
PCDHA4--PCDHAC2 19 0 9.50 0.00 PCDHA4^ENSG00000204967.12 3644 chr5:140809572:+ PCDHAC2^ENSG00000243232.6 18677 chr5:140978949:+ ONLY_REF_SPLICE YES 15 5 1.25 3.33 GT 1.9656 AG 1.3996 0.0322 1213 0
SMURF2P1--LRRC37B 18 0 18.00 0.00 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ LRRC37B^ENSG00000185158.12 23391 chr17:32045700:+ ONLY_REF_SPLICE YES 3 297 4.75 0.06 GT 1.7819 AG 1.9329 0.061 2779 0
SMURF2P1--LRRC37B 4 0 4.00 0.00 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ LRRC37B^ENSG00000185158.12 25104 chr17:32047761:+ ONLY_REF_SPLICE YES 3 225 1.25 0.02 GT 1.7819 AG 1.9656 0.0136 2308 0
SMURF2P1--LRRC37B 1 0 1.00 0.00 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ LRRC37B^ENSG00000185158.12 26445 chr17:32049102:+ ONLY_REF_SPLICE YES 3 199 0.50 0.01 GT 1.7819 AG 1.9329 0.0034 2714 0
45 rows