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Filename
KG1_FFPE_01_RNA_0003_B23LG7FLT4_1.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/fusioninspector/KG1_FFPE_01_RNA_0003_B23LG7FLT4_1.FusionInspector.fusions.abridged.tsv
Size
7.6 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 5:04 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
FGFR1OP2--FGFR1 2126 39 2126.00 39.00 FGFR1OP2^ENSG00000111790.14 5187 chr12:26957743:+ FGFR1^ENSG00000077782.21 37764 chr8:38418373:- ONLY_REF_SPLICE YES 387 498 5.58 4.34 GT 1.8256 AG 1.8256 7.3343 159 0
FGFR1OP2--FGFR1 3 0 3.00 0.00 FGFR1OP2^ENSG00000111790.14 5070 chr12:26957626:+ FGFR1^ENSG00000077782.21 41266 chr8:38414626:- INCL_NON_REF_SPLICE YES 1327 1927 0.00 0.00 CA 1.9656 GC 1.9656 0.0102 1705 0
BCAT1--AC023796.2 242 3 242.00 2.85 BCAT1^ENSG00000060982.15 1175 chr12:24948927:- AC023796.2^ENSG00000256482.1 28610 chr12:24830701:+ INCL_NON_REF_SPLICE YES 2054 9 0.12 24.60 GT 1.6895 AG 1.3383 0.8295 10000 0
BCAT1--AC023796.2 36 1 36.00 0.13 BCAT1^ENSG00000060982.15 1175 chr12:24948927:- AC023796.2^ENSG00000256482.1 29699 chr12:24836477:+ ONLY_REF_SPLICE YES 2054 29 0.02 1.27 GT 1.6895 AG 1.9086 0.1224 10000 0
BCAT1--AC023796.2 3 2 3.00 0.02 BCAT1^ENSG00000060982.15 1175 chr12:24948927:- AC023796.2^ENSG00000256482.1 28613 chr12:24830704:+ INCL_NON_REF_SPLICE YES 2054 10 0.00 0.55 GT 1.6895 AG 1.5329 0.0103 10000 0
ST7--TFEC 148 8 148.00 8.00 ST7^ENSG00000004866.22 1454 chr7:116953691:+ TFEC^ENSG00000105967.16 43030 chr7:116112038:- ONLY_REF_SPLICE YES 391 33 0.40 4.62 GT 1.8892 AG 1.9086 0.5285 3333 0
ST7--TFEC 21 0 21.00 0.00 ST7^ENSG00000004866.22 1454 chr7:116953691:+ TFEC^ENSG00000105967.16 46477 chr7:115984513:- ONLY_REF_SPLICE YES 391 1201 0.06 0.02 GT 1.8892 AG 1.8295 0.0711 2424 0
ST7--TFEC 9 0 9.00 0.00 ST7^ENSG00000004866.22 1454 chr7:116953691:+ TFEC^ENSG00000105967.16 49945 chr7:115956793:- ONLY_REF_SPLICE YES 391 1057 0.03 0.01 GT 1.8892 AG 1.7465 0.0305 3780 0
ST7--TFEC 2 0 2.00 0.00 ST7^ENSG00000004866.22 1454 chr7:116953691:+ TFEC^ENSG00000105967.16 47729 chr7:115974256:- ONLY_REF_SPLICE YES 391 962 0.01 0.00 GT 1.8892 AG 1.8256 0.0068 2693 0
AMN1--WIF1 121 0 121.00 0.00 AMN1^ENSG00000151743.11 8399 chr12:31697361:- WIF1^ENSG00000156076.10 22097 chr12:65062576:- ONLY_REF_SPLICE YES 142 2 0.85 40.67 GT 1.6895 AG 1.7056 0.4099 3015 0
CCDC169--SOHLH2 90 0 90.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 98 9 0.92 9.10 GT 1.8295 AG 1.7232 0.3049 1362 0
CCDC169--SOHLH2 7 0 7.00 0.00 CCDC169^ENSG00000242715.8 14978 chr13:36227199:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- INCL_NON_REF_SPLICE YES 127 9 0.06 0.80 GT 1.8295 AG 1.7232 0.0237 93 1
CCDC169--SOHLH2 4 0 4.00 0.00 CCDC169^ENSG00000242715.8 14829 chr13:36227348:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- INCL_NON_REF_SPLICE YES 95 9 0.05 0.50 GT 1.9656 AG 1.7232 0.0136 231 0
PPP1R9A--XRCC2 63 1 63.00 1.00 PPP1R9A^ENSG00000158528.12 15374 chr7:95252130:+ XRCC2^ENSG00000196584.3 35514 chr7:152660782:- ONLY_REF_SPLICE YES 109 529 0.59 0.12 GT 1.9656 AG 1.6895 0.2168 3189 0
PPP1R9A--XRCC2 8 0 8.00 0.00 PPP1R9A^ENSG00000158528.12 15374 chr7:95252130:+ XRCC2^ENSG00000196584.3 36596 chr7:152649363:- ONLY_REF_SPLICE YES 109 674 0.08 0.01 GT 1.9656 AG 1.7465 0.0271 2612 0
PPP1R9A--XRCC2 1 0 1.00 0.00 PPP1R9A^ENSG00000158528.12 15102 chr7:95251858:+ XRCC2^ENSG00000196584.3 35514 chr7:152660782:- ONLY_REF_SPLICE YES 112 529 0.02 0.00 GT 1.8323 AG 1.6895 0.0034 3431 0
GRIA3--STAG2 41 0 41.00 0.00 GRIA3^ENSG00000125675.19 7670 chrX:123326213:+ STAG2^ENSG00000101972.19 35940 chrX:124022531:+ ONLY_REF_SPLICE YES 38 10 1.08 3.82 GT 1.8892 AG 1.8256 0.1389 2763 0
GRIA3--STAG2 32 1 32.00 1.00 GRIA3^ENSG00000125675.19 7670 chrX:123326213:+ STAG2^ENSG00000101972.19 34875 chrX:124021367:+ ONLY_REF_SPLICE YES 38 1 0.87 17.00 GT 1.8892 AG 1.9086 0.1118 2689 0
PCDHGB2--PCDHGA10 41 0 5.12 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 30 42.00 1.35 GT 1.7819 AG 1.3383 0.0173 1890 0
PCDHGB2--PCDHGA11 41 0 5.12 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 3 42.00 10.50 GT 1.7819 AG 1.3383 0.0173 1018 0
PCDHGB2--PCDHGA12 41 0 5.12 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 42.00 42.00 GT 1.7819 AG 1.3383 0.0173 1413 0
PCDHGB2--PCDHGA8 41 0 5.12 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1 42.00 21.00 GT 1.7819 AG 1.3383 0.0173 1419 0
PCDHGB2--PCDHGA9 41 0 5.12 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1 42.00 21.00 GT 1.7819 AG 1.3383 0.0173 1493 0
PCDHGB2--PCDHGC3 41 0 5.12 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 42.00 42.00 GT 1.7819 AG 1.3383 0.0173 1210 0
PCDHGB2--PCDHGC4 41 0 5.12 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 42.00 42.00 GT 1.7819 AG 1.3383 0.0173 1585 0
PCDHGB2--PCDHGC5 41 0 5.12 0.00 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 42.00 14.00 GT 1.7819 AG 1.3383 0.0173 1206 0
TLK2--AC240565.1 28 0 28.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 635 32 0.05 0.88 GT 1.8892 AG 1.8892 0.0949 1734 0
TVP23C--CDRT4 27 0 27.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 49 6 0.56 4.00 GT 1.9329 AG 1.9899 0.0915 1215 0
TVP23C--CDRT4 15 0 15.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 249 6 0.06 2.29 GT 1.8323 AG 1.9899 0.0508 2126 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 249 9 0.02 0.50 GT 1.8323 AG 1.6402 0.0136 1363 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 49 9 0.08 0.40 GT 1.9329 AG 1.6402 0.0102 137 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 21 6 0.14 0.43 GT 1.8892 AG 1.9899 0.0068 1949 0
SMURF2P1--LRRC37B 17 0 17.00 0.00 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ LRRC37B^ENSG00000185158.12 23391 chr17:32045700:+ ONLY_REF_SPLICE YES 0 279 18.00 0.06 GT 1.7819 AG 1.9329 0.0576 2779 0
SMURF2P1--LRRC37B 1 0 1.00 0.00 SMURF2P1^ENSG00000248121.8 5305 chr17:30615980:+ LRRC37B^ENSG00000185158.12 23391 chr17:32045700:+ ONLY_REF_SPLICE YES 0 279 2.00 0.01 GT 1.8892 AG 1.9329 0.0034 3369 0
SMURF2P1--LRRC37B 1 0 1.00 0.00 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ LRRC37B^ENSG00000185158.12 26445 chr17:32049102:+ ONLY_REF_SPLICE YES 0 227 2.00 0.01 GT 1.7819 AG 1.9329 0.0034 2714 0
SMURF2P1--LRRC37B 1 0 1.00 0.00 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ LRRC37B^ENSG00000185158.12 25104 chr17:32047761:+ ONLY_REF_SPLICE YES 0 194 2.00 0.01 GT 1.7819 AG 1.9656 0.0034 2308 0
PRRT3-AS1--CRELD1 10 0 10.00 0.00 PRRT3-AS1^ENSG00000230082.1 2066 chr3:9948469:+ CRELD1^ENSG00000163703.19 6855 chr3:9934420:+ ONLY_REF_SPLICE YES 0 184 11.00 0.06 GT 1.9656 AG 1.7819 0.0339 68 1
38 rows