#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt PCDHGB2--PCDHGC4 2235 15 982.90 6.58 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 5 2251.00 375.17 GT 1.7819 AG 1.3383 3.3602 1585 0 PCDHGB2--PCDHGA10 2234 15 178.87 1.20 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 19 2250.00 112.50 GT 1.7819 AG 1.3383 0.6115 1890 0 PCDHGB2--PCDHGA10 3 15 3.00 0.02 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 6617 chr5:141413015:+ INCL_NON_REF_SPLICE NO 0 2 19.00 6.33 GT 1.7819 CA 1.2729 0.0103 927 0 PCDHGB2--PCDHGA11 2234 15 178.87 1.20 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4 2250.00 450.00 GT 1.7819 AG 1.3383 0.6115 1018 0 PCDHGB2--PCDHGA12 2234 15 178.87 1.20 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 2250.00 750.00 GT 1.7819 AG 1.3383 0.6115 1413 0 PCDHGB2--PCDHGA8 2234 15 178.87 1.20 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 7 2250.00 281.25 GT 1.7819 AG 1.3383 0.6115 1419 0 PCDHGB2--PCDHGA9 2234 15 178.87 1.20 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 774 2250.00 2.90 GT 1.7819 AG 1.3383 0.6115 1493 0 PCDHGB2--PCDHGC3 2234 15 178.87 1.20 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4301 2250.00 0.52 GT 1.7819 AG 1.3383 0.6115 1210 0 PCDHGB2--PCDHGC5 2234 15 178.87 1.20 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 44 2250.00 50.00 GT 1.7819 AG 1.3383 0.6115 1206 0 CENPU--ENPP6 321 5 321.00 4.93 CENPU^ENSG00000151725.12 8904 chr4:184712944:- ENPP6^ENSG00000164303.11 24241 chr4:184153733:- ONLY_REF_SPLICE YES 558 39 0.58 8.18 GT 1.9329 AG 1.9656 1.1068 149 0 CENPU--ENPP6 12 2 12.00 0.07 CENPU^ENSG00000151725.12 6906 chr4:184716397:- ENPP6^ENSG00000164303.11 24241 chr4:184153733:- ONLY_REF_SPLICE YES 638 39 0.02 0.38 GT 1.8295 AG 1.9656 0.041 1965 0 CENPU--ENPP6 1 0 1.00 0.00 CENPU^ENSG00000151725.12 8904 chr4:184712944:- ENPP6^ENSG00000164303.11 25421 chr4:184124272:- ONLY_REF_SPLICE YES 558 373 0.00 0.01 GT 1.9329 AG 1.7465 0.0034 1024 0 LMNA--MEX3A 216 0 216.00 0.00 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ MEX3A^ENSG00000254726.3 29334 chr1:156077682:- ONLY_REF_SPLICE YES 5579 387 0.04 0.56 GT 1.7465 AG 1.9086 0.7335 584 0 LMNA--MEX3A 21 0 21.00 0.00 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ MEX3A^ENSG00000254726.3 27867 chr1:156082011:- INCL_NON_REF_SPLICE YES 5579 149 0.00 0.15 GT 1.7465 AG 1.6402 0.0713 127 0 DHX38--AMPD1 214 1 214.00 0.56 DHX38^ENSG00000140829.12 3713 chr16:72097009:+ AMPD1^ENSG00000116748.21 23594 chr1:114688741:- ONLY_REF_SPLICE YES 110 72 1.95 2.96 GT 1.4295 AG 1.7465 0.7286 230 0 DHX38--AMPD1 167 2 167.00 1.44 DHX38^ENSG00000140829.12 4485 chr16:72097781:+ AMPD1^ENSG00000116748.21 23594 chr1:114688741:- ONLY_REF_SPLICE YES 427 72 0.40 2.33 GT 1.8892 AG 1.7465 0.572 277 0 DHX38--AMPD1 2 0 2.00 0.00 DHX38^ENSG00000140829.12 3713 chr16:72097009:+ AMPD1^ENSG00000116748.21 26155 chr1:114684364:- ONLY_REF_SPLICE YES 110 247 0.03 0.01 GT 1.4295 AG 1.8256 0.0068 2524 0 HIF1A--SNAPC1 164 3 164.00 3.00 HIF1A^ENSG00000100644.17 15201 chr14:61741188:+ SNAPC1^ENSG00000023608.5 23810 chr14:61766876:+ ONLY_REF_SPLICE YES 3433 774 0.05 0.22 GT 1.9899 AG 1.6895 0.5671 2372 0 TMED7--TICAM2 115 4 115.00 3.46 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1085 242 0.11 0.49 GT 1.9329 AG 1.6729 0.4022 331 0 TMED7--TICAM2 17 2 17.00 0.24 TMED7^ENSG00000134970.14 3819 chr5:115620435:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- ONLY_REF_SPLICE YES 1070 242 0.02 0.08 GT 1.9656 AG 1.6729 0.0585 1185 0 TMED7--TICAM2 10 4 10.00 0.30 TMED7^ENSG00000134970.14 4989 chr5:115616276:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1004 242 0.01 0.06 GC 1.7465 AG 1.6729 0.035 331 0 TMED7--TICAM2 9 0 9.00 0.00 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13166 chr5:115581197:- INCL_NON_REF_SPLICE YES 1085 615 0.01 0.02 GT 1.9329 AG 1.9656 0.0306 213 0 TLK2--AC240565.1 106 0 106.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 522 21 0.20 4.86 GT 1.8892 AG 1.8892 0.36 1734 0 BNC2--AL358117.1 105 3 105.00 3.00 BNC2^ENSG00000173068.18 6884 chr9:16704753:- AL358117.1^ENSG00000285169.2 32938 chr9:16988744:- ONLY_REF_SPLICE YES 873 2 0.12 36.33 GT 1.8892 AG 1.8062 0.3668 1281 0 BNC2--AL358117.1 5 0 5.00 0.00 BNC2^ENSG00000173068.18 5554 chr9:16727797:- AL358117.1^ENSG00000285169.2 32938 chr9:16988744:- ONLY_REF_SPLICE YES 191 2 0.03 2.00 GT 1.8892 AG 1.8062 0.017 2499 0 BNC2--AL358117.1 1 0 1.00 0.00 BNC2^ENSG00000173068.18 6884 chr9:16704753:- AL358117.1^ENSG00000285169.2 36695 chr9:16982867:- ONLY_REF_SPLICE YES 873 1 0.00 1.00 GT 1.8892 AG 1.9329 0.0034 4593 0 TVP23C--CDRT4 77 1 77.00 0.48 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 636 11 0.12 6.58 GT 1.8323 AG 1.9899 0.2631 2126 0 TVP23C--CDRT4 76 3 76.00 2.48 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 103 11 0.77 6.67 GT 1.9329 AG 1.9899 0.2665 1215 0 TVP23C--CDRT4 26 0 26.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 636 35 0.04 0.75 GT 1.8323 AG 1.6402 0.0883 1363 0 TVP23C--CDRT4 15 0 15.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 103 35 0.15 0.44 GT 1.9329 AG 1.6402 0.0509 137 0 TVP23C--CDRT4 8 0 8.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 248 11 0.04 0.75 GT 1.9086 AG 1.9899 0.0272 1774 0 TVP23C--CDRT4 6 1 6.00 0.04 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 48 11 0.16 0.67 GT 1.8892 AG 1.9899 0.0205 1949 0 ZKSCAN7--KIF15 56 0 56.00 0.00 ZKSCAN7^ENSG00000196345.13 7346 chr3:44570665:+ KIF15^ENSG00000163808.17 34746 chr3:44814911:+ ONLY_REF_SPLICE YES 17 163 3.17 0.35 GT 1.9656 AG 1.5850 0.1902 1082 0 ZKSCAN7--KIF15 4 0 4.00 0.00 ZKSCAN7^ENSG00000196345.13 5558 chr3:44568433:+ KIF15^ENSG00000163808.17 36248 chr3:44826375:+ ONLY_REF_SPLICE YES 30 147 0.16 0.03 GT 1.8256 AG 1.8062 0.0136 1900 0 ZKSCAN7--KIF15 2 0 2.00 0.00 ZKSCAN7^ENSG00000196345.13 5558 chr3:44568433:+ KIF15^ENSG00000163808.17 34746 chr3:44814911:+ ONLY_REF_SPLICE YES 30 163 0.10 0.02 GT 1.8256 AG 1.5850 0.0068 2383 0 ZKSCAN7--KIF15 1 0 1.00 0.00 ZKSCAN7^ENSG00000196345.13 5558 chr3:44568433:+ KIF15^ENSG00000163808.17 35912 chr3:44826039:+ ONLY_REF_SPLICE YES 30 125 0.06 0.02 GT 1.8256 AG 1.5546 0.0034 2236 0 ARHGEF3--RRP9 27 0 27.00 0.00 ARHGEF3^ENSG00000163947.12 4019 chr3:57035088:- RRP9^ENSG00000114767.7 32482 chr3:51941491:- ONLY_REF_SPLICE YES 98 81 0.28 0.34 GT 1.1589 AG 1.6895 0.0917 3389 0 ARHGEF3--RRP9 5 0 5.00 0.00 ARHGEF3^ENSG00000163947.12 4019 chr3:57035088:- RRP9^ENSG00000114767.7 33565 chr3:51938204:- ONLY_REF_SPLICE YES 98 402 0.06 0.01 GT 1.1589 AG 1.9086 0.017 2982 0 ARHGEF3--RRP9 4 0 4.00 0.00 ARHGEF3^ENSG00000163947.12 1104 chr3:57079226:- RRP9^ENSG00000114767.7 32482 chr3:51941491:- ONLY_REF_SPLICE YES 37 81 0.13 0.06 GT 1.5546 AG 1.6895 0.0136 1739 0 AC008969.1--SMARCA4 26 0 26.00 0.00 AC008969.1^ENSG00000176593.8 1986 chr19:58003046:+ SMARCA4^ENSG00000127616.19 25959 chr19:10994828:+ ONLY_REF_SPLICE YES 2 711 9.00 0.04 GT 1.9086 AG 1.8892 0.0883 1403 0 AC008969.1--SMARCA4 15 0 15.00 0.00 AC008969.1^ENSG00000176593.8 2276 chr19:58003336:+ SMARCA4^ENSG00000127616.19 25959 chr19:10994828:+ ONLY_REF_SPLICE YES 1 711 8.00 0.02 GT 1.6729 AG 1.8892 0.0509 1160 0 GUSB--NAIP 14 0 14.00 0.00 GUSB^ENSG00000169919.17 10117 chr7:65964323:- NAIP^ENSG00000249437.8 20593 chr5:71003857:- ONLY_REF_SPLICE YES 772 23 0.02 0.62 GT 1.9656 AG 1.8295 0.0475 1066 0 MB21D2--FGF12 12 0 12.00 0.00 MB21D2^ENSG00000180611.7 1227 chr3:192917630:- FGF12^ENSG00000114279.14 14161 chr3:192360538:- ONLY_REF_SPLICE YES 101 1418 0.13 0.01 GT 1.7465 AG 1.7056 0.0408 2125 0