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U118MG_FFPE_RNA_0001_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/fusioninspector/U118MG_FFPE_RNA_0001_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
Size
13.9 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 5:13 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHGB2--PCDHGC4 947 6 911.93 5.78 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 6 954.00 136.29 GT 1.7819 AG 1.3383 3.1125 1585 0
PCDHGB2--PCDHGA10 944 6 5.01 0.03 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 125 951.00 7.55 GT 1.7819 AG 1.3383 0.0171 1890 0
PCDHGB2--PCDHGA11 944 6 5.01 0.03 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 15 951.00 59.44 GT 1.7819 AG 1.3383 0.0171 1018 0
PCDHGB2--PCDHGA12 944 6 5.01 0.03 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 3 951.00 237.75 GT 1.7819 AG 1.3383 0.0171 1413 0
PCDHGB2--PCDHGA8 944 6 5.01 0.03 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 260 951.00 3.64 GT 1.7819 AG 1.3383 0.0171 1419 0
PCDHGB2--PCDHGA9 944 6 5.01 0.03 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 46 951.00 20.23 GT 1.7819 AG 1.3383 0.0171 1493 0
PCDHGB2--PCDHGC3 944 6 5.01 0.03 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4759 951.00 0.20 GT 1.7819 AG 1.3383 0.0171 1210 0
PCDHGB2--PCDHGC5 944 6 5.01 0.03 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 466 951.00 2.04 GT 1.7819 AG 1.3383 0.0171 1206 0
GOPC--ROS1 789 7 789.00 7.00 GOPC^ENSG00000047932.14 9512 chr6:117566854:- ROS1^ENSG00000047936.11 53814 chr6:117321394:- ONLY_REF_SPLICE YES 50 70 15.63 11.23 GT 1.7968 AG 1.9329 2.6997 1252 0
GOPC--ROS1 20 0 20.00 0.00 GOPC^ENSG00000047932.14 9512 chr6:117566854:- ROS1^ENSG00000047936.11 54950 chr6:117320030:- ONLY_REF_SPLICE YES 50 836 0.41 0.03 GT 1.7968 AG 1.5301 0.0678 141 0
GOPC--ROS1 4 0 4.00 0.00 GOPC^ENSG00000047932.14 9486 chr6:117566880:- ROS1^ENSG00000047936.11 55085 chr6:117319895:- INCL_NON_REF_SPLICE YES 306 1111 0.02 0.00 AA 1.9219 GG 1.6402 0.0136 9 4
GOPC--ROS1 1 0 1.00 0.00 GOPC^ENSG00000047932.14 9512 chr6:117566854:- ROS1^ENSG00000047936.11 56113 chr6:117318252:- ONLY_REF_SPLICE YES 50 1047 0.04 0.00 GT 1.7968 AG 1.8256 0.0034 167 0
PTPN21--CEP128 313 14 313.00 13.82 PTPN21^ENSG00000070778.13 3609 chr14:88550238:- CEP128^ENSG00000100629.17 45539 chr14:80838278:- ONLY_REF_SPLICE YES 255 109 1.28 2.98 GT 1.7232 AG 1.9329 1.1085 1026 0
PTPN21--CEP128 11 0 11.00 0.00 PTPN21^ENSG00000070778.13 3609 chr14:88550238:- CEP128^ENSG00000100629.17 47747 chr14:80831294:- ONLY_REF_SPLICE YES 255 77 0.05 0.15 GT 1.7232 AG 1.6402 0.0373 1579 0
PTPN21--CEP128 4 14 4.00 0.18 PTPN21^ENSG00000070778.13 4732 chr14:88547529:- CEP128^ENSG00000100629.17 45539 chr14:80838278:- ONLY_REF_SPLICE YES 163 109 0.12 0.17 GT 1.8892 AG 1.9329 0.0142 1628 0
PTPN21--CEP128 6 0 6.00 0.00 PTPN21^ENSG00000070778.13 3609 chr14:88550238:- CEP128^ENSG00000100629.17 46614 chr14:80836337:- ONLY_REF_SPLICE YES 255 207 0.03 0.03 GT 1.7232 AG 1.9086 0.0203 1212 0
ARFGEF1--PREX2 219 4 219.00 3.98 ARFGEF1^ENSG00000066777.9 1618 chr8:67343164:- PREX2^ENSG00000046889.19 48514 chr8:68017846:+ ONLY_REF_SPLICE YES 216 38 1.03 5.74 GT 1.7232 AG 1.9329 0.7563 1203 0
ARFGEF1--PREX2 2 2 2.00 0.02 ARFGEF1^ENSG00000066777.9 1618 chr8:67343164:- PREX2^ENSG00000046889.19 49586 chr8:68019549:+ ONLY_REF_SPLICE YES 216 105 0.02 0.05 GT 1.7232 AG 1.8892 0.0069 2232 0
ARFGEF1--PREX2 1 0 1.00 0.00 ARFGEF1^ENSG00000066777.9 1618 chr8:67343164:- PREX2^ENSG00000046889.19 50709 chr8:68022036:+ ONLY_REF_SPLICE YES 216 214 0.01 0.01 GT 1.7232 AG 1.8892 0.0034 3339 0
TMED7--TICAM2 141 7 141.00 6.51 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1080 354 0.14 0.42 GT 1.9329 AG 1.6729 0.5003 331 0
TMED7--TICAM2 18 2 18.00 0.21 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13166 chr5:115581197:- INCL_NON_REF_SPLICE YES 1080 813 0.02 0.03 GT 1.9329 AG 1.9656 0.0617 213 0
TMED7--TICAM2 3 7 3.00 0.14 TMED7^ENSG00000134970.14 4993 chr5:115616272:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 864 354 0.01 0.03 GT 1.8892 AG 1.6729 0.0107 332 0
TMED7--TICAM2 3 7 3.00 0.14 TMED7^ENSG00000134970.14 4989 chr5:115616276:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 990 354 0.01 0.03 GC 1.7465 AG 1.6729 0.0107 331 0
TMED7--TICAM2 3 0 3.00 0.00 TMED7^ENSG00000134970.14 3819 chr5:115620435:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- ONLY_REF_SPLICE YES 1028 354 0.00 0.01 GT 1.9656 AG 1.6729 0.0102 1185 0
LINC01674--POTED 69 2 69.00 1.90 LINC01674^ENSG00000228159.2 6698 chr21:13565781:+ POTED^ENSG00000166351.10 12994 chr21:13615123:+ ONLY_REF_SPLICE YES 2 54 24.00 1.31 GT 1.7232 AG 1.8892 0.2404 1780 0
LINC01674--POTED 7 1 7.00 0.09 LINC01674^ENSG00000228159.2 1165 chr21:13516271:+ POTED^ENSG00000166351.10 12994 chr21:13615123:+ ONLY_REF_SPLICE YES 0 54 9.00 0.16 GT 1.8892 AG 1.8892 0.024 3739 0
LINC01674--POTED 3 0 3.00 0.00 LINC01674^ENSG00000228159.2 6698 chr21:13565781:+ POTED^ENSG00000166351.10 22104 chr21:13630941:+ ONLY_REF_SPLICE YES 2 42 1.33 0.09 GT 1.7232 AG 1.4566 0.0102 1346 0
LINC01674--POTED 1 1 1.00 0.01 LINC01674^ENSG00000228159.2 3317 chr21:13547128:+ POTED^ENSG00000166351.10 12994 chr21:13615123:+ ONLY_REF_SPLICE YES 0 54 3.00 0.05 GT 1.7819 AG 1.8892 0.0034 2163 0
LINC01674--POTED 1 0 1.00 0.00 LINC01674^ENSG00000228159.2 6698 chr21:13565781:+ POTED^ENSG00000166351.10 19988 chr21:13628382:+ ONLY_REF_SPLICE YES 2 34 0.67 0.06 GT 1.7232 AG 1.7232 0.0034 2616 0
LINC01674--POTED 1 0 1.00 0.00 LINC01674^ENSG00000228159.2 6698 chr21:13565781:+ POTED^ENSG00000166351.10 13268 chr21:13615397:+ ONLY_REF_SPLICE YES 2 81 0.67 0.02 GT 1.7232 AG 1.9086 0.0034 1961 0
TVP23C--CDRT4 61 1 61.00 1.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 103 6 0.61 9.00 GT 1.9329 AG 1.9899 0.2103 1215 0
TVP23C--CDRT4 36 0 36.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 124 6 0.30 5.29 GT 1.9086 AG 1.9899 0.1221 1774 0
TVP23C--CDRT4 5 0 5.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 103 17 0.06 0.33 GT 1.9329 AG 1.6402 0.017 137 0
TVP23C--CDRT4 4 0 4.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 124 17 0.04 0.28 GT 1.9086 AG 1.6402 0.0136 697 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 124 0 0.02 3.00 GT 1.9086 AG 1.8892 0.0068 1679 0
TVP23C--CDRT4 2 0 2.00 0.00 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 37 6 0.08 0.43 GT 1.8892 AG 1.9899 0.0068 1949 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 602 6 0.00 0.29 GT 1.8323 AG 1.9899 0.0034 2126 0
KHDRBS1--ARMH1 47 2 47.00 1.52 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 21390 chr1:44689676:+ ONLY_REF_SPLICE YES 819 60 0.06 0.82 GT 1.4566 AG 1.9656 0.1646 3092 0
KHDRBS1--ARMH1 14 3 14.00 1.48 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 19910 chr1:44688196:+ ONLY_REF_SPLICE YES 819 19 0.02 0.90 GT 1.4566 AG 1.9329 0.0525 3516 0
KHDRBS1--ARMH1 8 0 8.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 21456 chr1:44689742:+ ONLY_REF_SPLICE YES 819 100 0.01 0.09 GT 1.4566 AG 1.7465 0.0271 3089 0
KHDRBS1--ARMH1 8 0 8.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 25839 chr1:44700923:+ ONLY_REF_SPLICE YES 819 147 0.01 0.06 GT 1.4566 AG 1.9899 0.0271 2917 0
KHDRBS1--ARMH1 3 0 3.00 0.00 KHDRBS1^ENSG00000121774.18 2635 chr1:32030422:+ ARMH1^ENSG00000198520.12 21390 chr1:44689676:+ ONLY_REF_SPLICE YES 929 60 0.00 0.07 GT 1.8892 AG 1.9656 0.0102 4208 0
KHDRBS1--ARMH1 2 0 2.00 0.00 KHDRBS1^ENSG00000121774.18 2635 chr1:32030422:+ ARMH1^ENSG00000198520.12 25839 chr1:44700923:+ ONLY_REF_SPLICE YES 929 147 0.00 0.02 GT 1.8892 AG 1.9899 0.0068 2687 0
KHDRBS1--ARMH1 2 0 2.00 0.00 KHDRBS1^ENSG00000121774.18 2635 chr1:32030422:+ ARMH1^ENSG00000198520.12 19910 chr1:44688196:+ ONLY_REF_SPLICE YES 929 19 0.00 0.15 GT 1.8892 AG 1.9329 0.0068 4528 0
KHDRBS1--ARMH1 1 0 1.00 0.00 KHDRBS1^ENSG00000121774.18 3752 chr1:32031640:+ ARMH1^ENSG00000198520.12 27036 chr1:44704089:+ ONLY_REF_SPLICE YES 819 117 0.00 0.02 GT 1.4566 AG 1.9656 0.0034 1874 0
PMS2P8--CCDC146 42 0 42.00 0.00 PMS2P8^ENSG00000273897.1 3705 chr7:73041421:+ CCDC146^ENSG00000135205.15 10191 chr7:77167658:+ ONLY_REF_SPLICE YES 26 4 1.59 8.60 GT 1.4566 AG 1.7465 0.1424 6786 0
PMS2P8--CCDC146 12 0 12.00 0.00 PMS2P8^ENSG00000273897.1 3705 chr7:73041421:+ CCDC146^ENSG00000135205.15 11358 chr7:77236947:+ ONLY_REF_SPLICE YES 26 30 0.48 0.42 GT 1.4566 AG 1.9329 0.0407 5731 0
PMS2P8--CCDC146 1 0 1.00 0.00 PMS2P8^ENSG00000273897.1 4794 chr7:73044560:+ CCDC146^ENSG00000135205.15 10191 chr7:77167658:+ ONLY_REF_SPLICE YES 24 4 0.08 0.40 GT 1.8323 AG 1.7465 0.0034 7283 0
AK2--TESK2 35 0 35.00 0.00 AK2^ENSG00000004455.17 3067 chr1:33036736:- TESK2^ENSG00000070759.17 30956 chr1:45345558:- ONLY_REF_SPLICE YES 1428 128 0.03 0.28 GT 1.7819 AG 1.9086 0.1187 895 0
AK2--TESK2 27 0 27.00 0.00 AK2^ENSG00000004455.17 3067 chr1:33036736:- TESK2^ENSG00000070759.17 30520 chr1:45345994:- ONLY_REF_SPLICE YES 1428 81 0.02 0.34 GT 1.7819 AG 1.9656 0.0916 1329 0
EFL1--GOLGA6L11P 35 0 35.00 0.00 EFL1^ENSG00000140598.15 16923 chr15:82214717:- GOLGA6L11P^ENSG00000223698.3 29147 chrY:24169914:+ ONLY_REF_SPLICE YES 563 1 0.06 18.00 GT 1.9086 AG 1.5058 0.1187 2639 0
PCDHA11--PCDHAC1 35 0 17.50 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC1^ENSG00000248383.5 12566 chr5:140978949:+ INCL_NON_REF_SPLICE YES 5 2 6.00 12.00 GT 1.7819 AG 1.3996 0.0594 1419 0
PCDHA11--PCDHAC2 35 0 17.50 0.00 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC2^ENSG00000243232.6 11430 chr5:140978949:+ INCL_NON_REF_SPLICE YES 5 24 6.00 1.44 GT 1.7819 AG 1.3996 0.0594 1466 0
RPSAP52--HMGA2 29 0 29.00 0.00 RPSAP52^ENSG00000241749.4 1155 chr12:65826843:- HMGA2^ENSG00000149948.14 8958 chr12:65828001:+ ONLY_REF_SPLICE YES 20 3185 1.43 0.01 GT 1.9329 AG 1.8256 0.0984 799 0
MIER1--CD177 26 0 26.00 0.00 MIER1^ENSG00000198160.15 2302 chr1:66926242:+ CD177^ENSG00000204936.10 27594 chr19:43353853:+ ONLY_REF_SPLICE YES 483 10 0.06 2.45 GT 1.8892 AG 1.7968 0.0882 5564 0
MIER1--CD177 9 0 9.00 0.00 MIER1^ENSG00000198160.15 2302 chr1:66926242:+ CD177^ENSG00000204936.10 27948 chr19:43354207:+ ONLY_REF_SPLICE YES 483 25 0.02 0.38 GT 1.8892 AG 1.8062 0.0305 5210 0
TMED5--DR1 24 1 24.00 1.00 TMED5^ENSG00000117500.13 1463 chr1:93180054:- DR1^ENSG00000117505.13 19171 chr1:93353908:+ ONLY_REF_SPLICE YES 1273 789 0.02 0.03 GT 1.8892 AG 1.9329 0.0848 1482 0
PPTC7--TCTN1 24 0 24.00 0.00 PPTC7^ENSG00000196850.6 1510 chr12:110582809:- TCTN1^ENSG00000204852.17 36709 chr12:110647211:+ ONLY_REF_SPLICE YES 321 469 0.08 0.05 GT 1.7056 AG 1.8892 0.0814 2740 0
PPTC7--TCTN1 4 0 4.00 0.00 PPTC7^ENSG00000196850.6 1510 chr12:110582809:- TCTN1^ENSG00000204852.17 36694 chr12:110647196:+ ONLY_REF_SPLICE YES 321 458 0.02 0.01 GT 1.7056 AG 1.7232 0.0136 2726 0
VCL--ADK 19 1 19.00 1.00 VCL^ENSG00000035403.18 3233 chr10:73998375:+ ADK^ENSG00000156110.15 57954 chr10:74708321:+ ONLY_REF_SPLICE YES 1787 855 0.01 0.02 GT 1.8892 AG 1.7968 0.0678 1017 0
CEP128--ALDH6A1 19 0 19.00 0.00 CEP128^ENSG00000100629.17 15635 chr14:80840682:- ALDH6A1^ENSG00000119711.13 43770 chr14:74075017:- ONLY_REF_SPLICE YES 118 200 0.17 0.10 GT 1.7232 AG 1.8892 0.0644 4764 0
CEP128--ALDH6A1 2 0 2.00 0.00 CEP128^ENSG00000100629.17 14548 chr14:80862757:- ALDH6A1^ENSG00000119711.13 43770 chr14:74075017:- ONLY_REF_SPLICE YES 97 200 0.03 0.01 GT 1.9329 AG 1.8892 0.0068 5523 0
CARHSP1--PDILT 18 0 18.00 0.00 CARHSP1^ENSG00000153048.11 1047 chr16:8868966:- PDILT^ENSG00000169340.10 18943 chr16:20376201:- ONLY_REF_SPLICE YES 236 26 0.08 0.70 GT 1.8323 AG 1.7819 0.061 1378 0
CARHSP1--PDILT 11 0 11.00 0.00 CARHSP1^ENSG00000153048.11 1047 chr16:8868966:- PDILT^ENSG00000169340.10 22536 chr16:20369689:- ONLY_REF_SPLICE YES 236 97 0.05 0.12 GT 1.8323 AG 1.3996 0.0373 1673 0
CARHSP1--PDILT 1 0 1.00 0.00 CARHSP1^ENSG00000153048.11 1047 chr16:8868966:- PDILT^ENSG00000169340.10 21410 chr16:20372927:- ONLY_REF_SPLICE YES 236 81 0.01 0.02 GT 1.8323 AG 1.7819 0.0034 1553 0
ENTPD4--PHYHIP 15 0 15.00 0.00 ENTPD4^ENSG00000197217.13 18809 chr8:23403954:- PHYHIP^ENSG00000168490.14 26069 chr8:22228386:- ONLY_REF_SPLICE YES 1 12 8.00 1.23 GT 1.8323 AG 1.7819 0.0509 192 0
SOGA3--KIAA0408 13 0 13.00 0.00 SOGA3^ENSG00000214338.10 11088 chr6:127473080:- KIAA0408^ENSG00000189367.15 15731 chr6:127454101:- INCL_NON_REF_SPLICE YES 0 3 14.00 3.50 GT 1.6895 AG 1.7465 0.0441 176 0
SOGA3--KIAA0408 1 0 1.00 0.00 SOGA3^ENSG00000214338.10 9767 chr6:127475302:- KIAA0408^ENSG00000189367.15 21815 chr6:127444282:- ONLY_REF_SPLICE YES 218 349 0.01 0.01 GT 1.9656 AG 1.9899 0.0034 299 0
AC006453.1--FAM230C 12 0 12.00 0.00 AC006453.1^ENSG00000283132.1 3417 chr2:89631890:- FAM230C^ENSG00000279516.2 14493 chr13:18218999:+ ONLY_REF_SPLICE YES 236 5 0.05 2.17 GT 1.8892 AG 1.9329 0.0407 1981 0
FZR1--NFIC 10 0 10.00 0.00 FZR1^ENSG00000105325.15 1164 chr19:3506474:+ NFIC^ENSG00000141905.19 23162 chr19:3381712:+ ONLY_REF_SPLICE YES 982 2758 0.01 0.00 GT 1.5301 AG 1.9656 0.0339 1003 0
71 rows