File Info

Filename
786-O_FFPE_RNA_0001_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/fusioninspector/786-O_FFPE_RNA_0001_B23LG7FLT4_3.FusionInspector.fusions.abridged.tsv
Size
11.2 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 5:39 PM

Content

View in new tab
#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHGB2--PCDHGC4 2429 5 1021.54 2.10 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 2435.00 811.67 GT 1.7819 AG 1.3383 3.4741 1585 0
PCDHGB2--PCDHGA10 2428 5 201.07 0.41 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 24 2434.00 97.36 GT 1.7819 AG 1.3383 0.6838 1890 0
PCDHGB2--PCDHGA11 2428 5 201.07 0.41 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 6 2434.00 347.71 GT 1.7819 AG 1.3383 0.6838 1018 0
PCDHGB2--PCDHGA12 2428 5 201.07 0.41 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1 2434.00 1217.00 GT 1.7819 AG 1.3383 0.6838 1413 0
PCDHGB2--PCDHGA8 2428 5 201.07 0.41 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4 2434.00 486.80 GT 1.7819 AG 1.3383 0.6838 1419 0
PCDHGB2--PCDHGA9 2428 5 201.07 0.41 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 656 2434.00 3.70 GT 1.7819 AG 1.3383 0.6838 1493 0
PCDHGB2--PCDHGC3 2428 5 201.07 0.41 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 3833 2434.00 0.63 GT 1.7819 AG 1.3383 0.6838 1210 0
PCDHGB2--PCDHGC5 2428 5 201.07 0.41 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 17 2434.00 135.22 GT 1.7819 AG 1.3383 0.6838 1206 0
CENPU--ENPP6 279 5 279.00 4.88 CENPU^ENSG00000151725.12 8904 chr4:184712944:- ENPP6^ENSG00000164303.11 24241 chr4:184153733:- ONLY_REF_SPLICE YES 524 48 0.54 5.82 GT 1.9329 AG 1.9656 0.9635 149 0
CENPU--ENPP6 12 3 12.00 0.12 CENPU^ENSG00000151725.12 6906 chr4:184716397:- ENPP6^ENSG00000164303.11 24241 chr4:184153733:- ONLY_REF_SPLICE YES 601 48 0.03 0.33 GT 1.8295 AG 1.9656 0.0411 1965 0
CENPU--ENPP6 4 0 4.00 0.00 CENPU^ENSG00000151725.12 8904 chr4:184712944:- ENPP6^ENSG00000164303.11 25421 chr4:184124272:- ONLY_REF_SPLICE YES 524 346 0.01 0.01 GT 1.9329 AG 1.7465 0.0136 1024 0
HIF1A--SNAPC1 188 3 188.00 3.00 HIF1A^ENSG00000100644.17 15201 chr14:61741188:+ SNAPC1^ENSG00000023608.5 23810 chr14:61766876:+ ONLY_REF_SPLICE YES 3171 735 0.06 0.26 GT 1.9899 AG 1.6895 0.6483 2372 0
HIF1A--SNAPC1 1 0 1.00 0.00 HIF1A^ENSG00000100644.17 14640 chr14:61740627:+ SNAPC1^ENSG00000023608.5 23810 chr14:61766876:+ ONLY_REF_SPLICE YES 2867 735 0.00 0.00 GT 1.7819 AG 1.6895 0.0034 1812 0
LMNA--MEX3A 187 0 187.00 0.00 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ MEX3A^ENSG00000254726.3 29334 chr1:156077682:- ONLY_REF_SPLICE YES 5658 350 0.03 0.54 GT 1.7465 AG 1.9086 0.6347 584 0
LMNA--MEX3A 13 0 13.00 0.00 LMNA^ENSG00000160789.23 12742 chr1:156115274:+ MEX3A^ENSG00000254726.3 27867 chr1:156082011:- INCL_NON_REF_SPLICE YES 5658 118 0.00 0.12 GT 1.7465 AG 1.6402 0.0441 127 0
DHX38--AMPD1 184 2 184.00 2.00 DHX38^ENSG00000140829.12 4485 chr16:72097781:+ AMPD1^ENSG00000116748.21 23594 chr1:114688741:- ONLY_REF_SPLICE YES 419 65 0.45 2.83 GT 1.8892 AG 1.7465 0.6313 277 0
DHX38--AMPD1 178 0 178.00 0.00 DHX38^ENSG00000140829.12 3713 chr16:72097009:+ AMPD1^ENSG00000116748.21 23594 chr1:114688741:- ONLY_REF_SPLICE YES 114 65 1.56 2.71 GT 1.4295 AG 1.7465 0.6041 230 0
DHX38--AMPD1 1 0 1.00 0.00 DHX38^ENSG00000140829.12 1439 chr16:72094051:+ AMPD1^ENSG00000116748.21 23594 chr1:114688741:- ONLY_REF_SPLICE YES 591 65 0.00 0.03 GT 1.7465 AG 1.7465 0.0034 2504 0
TMED7--TICAM2 133 2 133.00 1.81 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1121 203 0.12 0.67 GT 1.9329 AG 1.6729 0.4575 331 0
TMED7--TICAM2 28 0 28.00 0.00 TMED7^ENSG00000134970.14 3819 chr5:115620435:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- ONLY_REF_SPLICE YES 991 203 0.03 0.14 GT 1.9656 AG 1.6729 0.095 1185 0
TMED7--TICAM2 10 0 10.00 0.00 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13166 chr5:115581197:- INCL_NON_REF_SPLICE YES 1121 539 0.01 0.02 GT 1.9329 AG 1.9656 0.0339 213 0
TMED7--TICAM2 8 2 8.00 0.11 TMED7^ENSG00000134970.14 4989 chr5:115616276:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1039 203 0.01 0.05 GC 1.7465 AG 1.6729 0.0276 331 0
TMED7--TICAM2 6 2 6.00 0.08 TMED7^ENSG00000134970.14 4993 chr5:115616272:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 923 203 0.01 0.04 GT 1.8892 AG 1.6729 0.0207 332 0
TVP23C--CDRT4 96 0 96.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 555 7 0.17 12.12 GT 1.8323 AG 1.9899 0.3258 2126 0
TVP23C--CDRT4 64 0 64.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 103 7 0.62 8.12 GT 1.9329 AG 1.9899 0.2172 1215 0
TVP23C--CDRT4 39 0 39.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 555 37 0.07 1.05 GT 1.8323 AG 1.6402 0.1324 1363 0
TVP23C--CDRT4 17 0 17.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 103 37 0.17 0.47 GT 1.9329 AG 1.6402 0.0577 137 0
TVP23C--CDRT4 3 0 3.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- INCL_NON_REF_SPLICE YES 103 1 0.04 2.00 GT 1.9329 AG 1.8892 0.0102 1153 0
TVP23C--CDRT4 1 0 1.00 0.00 TVP23C^ENSG00000175106.17 7982 chr17:15540433:- CDRT4^ENSG00000239704.11 21051 chr17:15453085:- ONLY_REF_SPLICE YES 555 1 0.00 1.00 GT 1.8323 AG 1.8892 0.0034 1044 0
TLK2--AC240565.1 94 0 94.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 474 21 0.20 4.32 GT 1.8892 AG 1.8892 0.319 1734 0
GUSBP13--NAIP 80 1 80.00 1.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 14552 chr5:71003857:- ONLY_REF_SPLICE YES 0 13 82.00 5.86 GT 1.9329 AG 1.8295 0.2749 2864 0
GUSBP13--NAIP 6 0 6.00 0.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 21403 chr5:70985886:- ONLY_REF_SPLICE YES 0 133 7.00 0.05 GT 1.9329 AG 1.8323 0.0204 1351 0
GUSBP13--NAIP 4 0 4.00 0.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 19415 chr5:70987874:- ONLY_REF_SPLICE YES 0 49 5.00 0.10 GT 1.9329 AG 1.6895 0.0136 2097 0
GUSBP13--NAIP 3 0 3.00 0.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 24515 chr5:70980036:- ONLY_REF_SPLICE YES 0 139 4.00 0.03 GT 1.9329 AG 1.5850 0.0102 1912 0
GUSBP13--NAIP 1 0 1.00 0.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 20487 chr5:70986802:- ONLY_REF_SPLICE YES 0 59 2.00 0.03 GT 1.9329 AG 1.6729 0.0034 1426 0
BNC2--AL358117.1 71 1 71.00 0.95 BNC2^ENSG00000173068.18 6884 chr9:16704753:- AL358117.1^ENSG00000285169.2 32938 chr9:16988744:- ONLY_REF_SPLICE YES 729 0 0.10 73.00 GT 1.8892 AG 1.8062 0.2442 1281 0
BNC2--AL358117.1 10 0 10.00 0.00 BNC2^ENSG00000173068.18 5554 chr9:16727797:- AL358117.1^ENSG00000285169.2 32938 chr9:16988744:- ONLY_REF_SPLICE YES 145 0 0.08 11.00 GT 1.8892 AG 1.8062 0.0339 2499 0
BNC2--AL358117.1 4 1 4.00 0.05 BNC2^ENSG00000173068.18 6889 chr9:16704748:- AL358117.1^ENSG00000285169.2 32938 chr9:16988744:- INCL_NON_REF_SPLICE YES 723 0 0.01 6.00 GT 1.9899 AG 1.8062 0.0138 1277 0
BNC2--AL358117.1 3 0 3.00 0.00 BNC2^ENSG00000173068.18 6884 chr9:16704753:- AL358117.1^ENSG00000285169.2 36695 chr9:16982867:- ONLY_REF_SPLICE YES 729 1 0.01 2.00 GT 1.8892 AG 1.9329 0.0102 4593 0
ZKSCAN7--KIF15 44 1 44.00 1.00 ZKSCAN7^ENSG00000196345.13 7346 chr3:44570665:+ KIF15^ENSG00000163808.17 34746 chr3:44814911:+ ONLY_REF_SPLICE YES 19 152 2.30 0.30 GT 1.9656 AG 1.5850 0.1527 1082 0
ZKSCAN7--KIF15 9 0 9.00 0.00 ZKSCAN7^ENSG00000196345.13 5558 chr3:44568433:+ KIF15^ENSG00000163808.17 36248 chr3:44826375:+ ONLY_REF_SPLICE YES 43 110 0.23 0.09 GT 1.8256 AG 1.8062 0.0305 1900 0
ZKSCAN7--KIF15 2 0 2.00 0.00 ZKSCAN7^ENSG00000196345.13 5558 chr3:44568433:+ KIF15^ENSG00000163808.17 34746 chr3:44814911:+ ONLY_REF_SPLICE YES 43 152 0.07 0.02 GT 1.8256 AG 1.5850 0.0068 2383 0
ZKSCAN7--KIF15 1 0 1.00 0.00 ZKSCAN7^ENSG00000196345.13 5558 chr3:44568433:+ KIF15^ENSG00000163808.17 35912 chr3:44826039:+ ONLY_REF_SPLICE YES 43 87 0.05 0.02 GT 1.8256 AG 1.5546 0.0034 2236 0
AC008969.1--SMARCA4 25 1 25.00 0.56 AC008969.1^ENSG00000176593.8 1986 chr19:58003046:+ SMARCA4^ENSG00000127616.19 25959 chr19:10994828:+ ONLY_REF_SPLICE YES 1 599 13.50 0.04 GT 1.9086 AG 1.8892 0.0867 1403 0
AC008969.1--SMARCA4 19 1 19.00 0.42 AC008969.1^ENSG00000176593.8 2276 chr19:58003336:+ SMARCA4^ENSG00000127616.19 25959 chr19:10994828:+ ONLY_REF_SPLICE YES 1 599 10.50 0.04 GT 1.6729 AG 1.8892 0.0659 1160 0
AC008969.1--SMARCA4 1 1 1.00 0.02 AC008969.1^ENSG00000176593.8 3640 chr19:58004700:+ SMARCA4^ENSG00000127616.19 25959 chr19:10994828:+ ONLY_REF_SPLICE NO 2 599 1.00 0.01 GT 1.8323 AG 1.8892 0.0035 812 0
ARHGEF3--RRP9 19 1 19.00 1.00 ARHGEF3^ENSG00000163947.12 4019 chr3:57035088:- RRP9^ENSG00000114767.7 32482 chr3:51941491:- ONLY_REF_SPLICE YES 84 76 0.25 0.27 GT 1.1589 AG 1.6895 0.0679 3389 0
ARHGEF3--RRP9 9 0 9.00 0.00 ARHGEF3^ENSG00000163947.12 4019 chr3:57035088:- RRP9^ENSG00000114767.7 33565 chr3:51938204:- ONLY_REF_SPLICE YES 84 391 0.12 0.03 GT 1.1589 AG 1.9086 0.0305 2982 0
ARHGEF3--RRP9 2 0 2.00 0.00 ARHGEF3^ENSG00000163947.12 1104 chr3:57079226:- RRP9^ENSG00000114767.7 32482 chr3:51941491:- ONLY_REF_SPLICE YES 34 76 0.09 0.04 GT 1.5546 AG 1.6895 0.0068 1739 0
CCDC169--SOHLH2 13 0 13.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 28 0 0.48 14.00 GT 1.8295 AG 1.7232 0.0441 1362 0
CCDC169--SOHLH2 1 0 1.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 27842 chr13:36190056:- ONLY_REF_SPLICE YES 28 9 0.07 0.20 GT 1.8295 AG 1.8892 0.0034 1850 0
TAS2R14--PRH2 7 1 7.00 0.41 TAS2R14^ENSG00000212127.6 2321 chr12:11047020:- PRH2^ENSG00000134551.13 11775 chr12:10930662:+ ONLY_REF_SPLICE YES 56 265 0.16 0.03 GT 1.9086 AG 1.8892 0.0252 2006 0
TAS2R14--PRH2 5 1 5.00 0.29 TAS2R14^ENSG00000212127.6 4492 chr12:10973655:- PRH2^ENSG00000134551.13 11775 chr12:10930662:+ ONLY_REF_SPLICE YES 52 265 0.13 0.03 GT 1.9329 AG 1.8892 0.018 1854 0
TAS2R14--PRH2 4 1 4.00 0.24 TAS2R14^ENSG00000212127.6 2321 chr12:11047020:- PRH2^ENSG00000134551.13 11382 chr12:10930269:+ ONLY_REF_SPLICE YES 56 1 0.11 3.00 GT 1.9086 AG 1.8892 0.0144 2399 0
TAS2R14--PRH2 1 1 1.00 0.06 TAS2R14^ENSG00000212127.6 3425 chr12:11034782:- PRH2^ENSG00000134551.13 11382 chr12:10930269:+ ONLY_REF_SPLICE YES 33 1 0.09 1.50 GT 1.6402 AG 1.8892 0.0036 2673 0
GTF2A1L--STON1-GTF2A1L 1 0 1.00 0.00 GTF2A1L^ENSG00000242441.8 8867 chr2:48671680:+ STON1-GTF2A1L^ENSG00000068781.21 15563 chr2:48776280:+ ONLY_REF_SPLICE YES 13 51 0.14 0.04 GT 1.8256 AG 1.7819 0.0034 1034 0
57 rows