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A673_FFPE_RNA_0001_B23LG7FLT4_1.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/fusioninspector/A673_FFPE_RNA_0001_B23LG7FLT4_1.FusionInspector.fusions.abridged.tsv
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9.2 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 5:41 PM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
EWSR1--FLI1 6110 17 6110.00 16.97 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 37165 chr11:128805366:+ ONLY_REF_SPLICE YES 4111 184 1.49 33.12 GT 1.8062 AG 1.7819 20.768 1466 0
EWSR1--FLI1 55 0 55.00 0.00 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 40039 chr11:128809157:+ ONLY_REF_SPLICE YES 4111 2016 0.01 0.03 GT 1.8062 AG 1.9329 0.1864 1609 0
EWSR1--FLI1 42 1 42.00 0.01 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 38979 chr11:128807180:+ ONLY_REF_SPLICE YES 4111 1155 0.01 0.04 GT 1.8062 AG 1.8062 0.1424 1231 0
EWSR1--FLI1 8 17 8.00 0.02 EWSR1^ENSG00000182944.18 11554 chr22:29287134:+ FLI1^ENSG00000151702.17 35687 chr11:128803888:+ INCL_NON_REF_SPLICE YES 4111 4 0.01 5.20 GT 1.8062 AG 1.8892 0.0272 1464 0
EWSR1--FLI1 1 0 1.00 0.00 EWSR1^ENSG00000182944.18 10342 chr22:29282557:+ FLI1^ENSG00000151702.17 37165 chr11:128805366:+ ONLY_REF_SPLICE YES 4688 184 0.00 0.01 GT 1.6729 AG 1.7819 0.0034 697 0
PCDHGA6--PCDHGB6 624 2 312.50 0.99 PCDHGA6^ENSG00000253731.3 3515 chr5:141376507:+ PCDHGB6^ENSG00000253305.2 15252 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 10 627.00 57.00 GT 1.8892 AG 1.3383 1.0627 1927 0
PCDHGA6--PCDHGB6 7 2 7.00 0.02 PCDHGA6^ENSG00000253731.3 3515 chr5:141376507:+ PCDHGB6^ENSG00000253305.2 10898 chr5:141409268:+ INCL_NON_REF_SPLICE YES 0 273 10.00 0.04 GT 1.8892 AG 1.7819 0.0238 520 0
PCDHGA6--PCDHGC5 624 2 312.50 0.99 PCDHGA6^ENSG00000253731.3 3515 chr5:141376507:+ PCDHGC5^ENSG00000240764.4 13500 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 36 627.00 16.95 GT 1.8892 AG 1.3383 1.0627 1075 0
PCDHA6--PCDHAC1 476 1 238.00 0.50 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC1^ENSG00000248383.5 12415 chr5:140978949:+ INCL_NON_REF_SPLICE YES 115 148 4.12 3.21 GT 1.9219 AG 1.3996 0.8084 1175 0
PCDHA6--PCDHAC1 11 0 5.50 0.00 PCDHA6^ENSG00000081842.18 2736 chr5:140829693:+ PCDHAC1^ENSG00000248383.5 12415 chr5:140978949:+ INCL_NON_REF_SPLICE YES 730 148 0.02 0.08 GT 1.9329 AG 1.3996 0.0186 1433 0
PCDHA6--PCDHAC1 10 0 5.00 0.00 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC1^ENSG00000248383.5 14563 chr5:141009627:+ INCL_NON_REF_SPLICE YES 115 660 0.09 0.02 GT 1.9219 AG 1.5219 0.0169 638 0
PCDHA6--PCDHAC2 476 1 238.00 0.50 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC2^ENSG00000243232.6 11279 chr5:140978949:+ INCL_NON_REF_SPLICE YES 115 406 4.12 1.17 GT 1.9219 AG 1.3996 0.8084 1069 0
PCDHA6--PCDHAC2 11 0 5.50 0.00 PCDHA6^ENSG00000081842.18 2736 chr5:140829693:+ PCDHAC2^ENSG00000243232.6 11279 chr5:140978949:+ INCL_NON_REF_SPLICE YES 730 406 0.02 0.03 GT 1.9329 AG 1.3996 0.0186 1106 0
PCDHA6--PCDHAC2 10 0 5.00 0.00 PCDHA6^ENSG00000081842.18 3528 chr5:140830485:+ PCDHAC2^ENSG00000243232.6 15289 chr5:141009627:+ INCL_NON_REF_SPLICE YES 115 745 0.09 0.01 GT 1.9219 AG 1.5219 0.0169 638 0
SMURF2P1--SP2 391 2 391.00 1.95 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ SP2^ENSG00000167182.15 13324 chr17:47915312:+ ONLY_REF_SPLICE YES 0 316 394.00 1.24 GT 1.7819 AG 1.7056 1.3319 2882 0
SMURF2P1--SP2 5 0 5.00 0.00 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ SP2^ENSG00000167182.15 16869 chr17:47922962:+ ONLY_REF_SPLICE YES 0 367 6.00 0.02 GT 1.7819 AG 1.9219 0.0169 2910 0
SMURF2P1--SP2 4 2 4.00 0.02 SMURF2P1^ENSG00000248121.8 5305 chr17:30615980:+ SP2^ENSG00000167182.15 13324 chr17:47915312:+ ONLY_REF_SPLICE YES 0 316 7.00 0.02 GT 1.8892 AG 1.7056 0.0137 3802 0
SMURF2P1--SP2 3 2 3.00 0.01 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ SP2^ENSG00000167182.15 11671 chr17:47909664:+ ONLY_REF_SPLICE YES 0 195 6.00 0.03 GT 1.7819 AG 1.6895 0.0102 4099 0
SMURF2P1--SP2 3 2 3.00 0.01 SMURF2P1^ENSG00000248121.8 4220 chr17:30610942:+ SP2^ENSG00000167182.15 12738 chr17:47914726:+ ONLY_REF_SPLICE YES 0 201 6.00 0.03 GT 1.7819 AG 1.7819 0.0102 3270 0
PCDHGB2--PCDHGA10 237 1 29.62 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 18 239.00 12.58 GT 1.7819 AG 1.3383 0.1008 1890 0
PCDHGB2--PCDHGA11 237 1 29.62 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 715 239.00 0.33 GT 1.7819 AG 1.3383 0.1008 1018 0
PCDHGB2--PCDHGA12 237 1 29.62 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 3 239.00 59.75 GT 1.7819 AG 1.3383 0.1008 1413 0
PCDHGB2--PCDHGA8 237 1 29.62 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 16 239.00 14.06 GT 1.7819 AG 1.3383 0.1008 1419 0
PCDHGB2--PCDHGA9 237 1 29.62 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 15 239.00 14.94 GT 1.7819 AG 1.3383 0.1008 1493 0
PCDHGB2--PCDHGC3 237 1 29.62 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1053 239.00 0.23 GT 1.7819 AG 1.3383 0.1008 1210 0
PCDHGB2--PCDHGC4 237 1 29.62 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 17 239.00 13.28 GT 1.7819 AG 1.3383 0.1008 1585 0
PCDHGB2--PCDHGC5 237 1 29.62 0.12 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 36 239.00 6.46 GT 1.7819 AG 1.3383 0.1008 1206 0
FBXO25--AC240565.1 120 0 120.00 0.00 FBXO25^ENSG00000147364.17 7247 chr8:435707:+ AC240565.1^ENSG00000280136.2 27298 chr17:106864:- ONLY_REF_SPLICE YES 137 48 0.88 2.47 GT 1.7819 AG 1.8892 0.4068 7162 0
SUPT20H--CHRDL2 101 0 101.00 0.00 SUPT20H^ENSG00000102710.20 1155 chr13:37059559:- CHRDL2^ENSG00000054938.16 46703 chr11:74697297:- ONLY_REF_SPLICE YES 611 46 0.17 2.17 GT 1.5656 AG 1.9329 0.3424 5352 0
SUPT20H--CHRDL2 23 0 23.00 0.00 SUPT20H^ENSG00000102710.20 1234 chr13:37059480:- CHRDL2^ENSG00000054938.16 46703 chr11:74697297:- ONLY_REF_SPLICE YES 658 46 0.04 0.51 GT 1.7465 AG 1.9329 0.078 5278 0
CCDC169--SOHLH2 100 0 100.00 0.00 CCDC169^ENSG00000242715.8 10007 chr13:36248606:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 71 1 1.40 50.50 GT 1.8295 AG 1.7232 0.339 1362 0
CCDC169--SOHLH2 3 0 3.00 0.00 CCDC169^ENSG00000242715.8 3518 chr13:36283469:- SOHLH2^ENSG00000120669.16 24280 chr13:36202093:- ONLY_REF_SPLICE YES 120 1 0.03 2.00 GT 1.9086 AG 1.7232 0.0102 1270 0
CYP7B1--LINC01414 64 0 64.00 0.00 CYP7B1^ENSG00000172817.4 1272 chr8:64798466:- LINC01414^ENSG00000253554.7 33162 chr8:63687231:- ONLY_REF_SPLICE YES 226 0 0.29 65.00 GT 1.8323 AG 1.6895 0.2169 5396 0
CYP7B1--LINC01414 1 0 1.00 0.00 CYP7B1^ENSG00000172817.4 1272 chr8:64798466:- LINC01414^ENSG00000253554.7 31927 chr8:63729008:- ONLY_REF_SPLICE YES 226 0 0.01 2.00 GT 1.8323 AG 1.9329 0.0034 4491 0
SOGA3--KIAA0408 36 2 36.00 2.00 SOGA3^ENSG00000214338.10 11088 chr6:127473080:- KIAA0408^ENSG00000189367.15 15731 chr6:127454101:- INCL_NON_REF_SPLICE YES 3 40 9.75 0.95 GT 1.6895 AG 1.7465 0.1288 176 0
SOGA3--KIAA0408 2 0 2.00 0.00 SOGA3^ENSG00000214338.10 9776 chr6:127475293:- KIAA0408^ENSG00000189367.15 19482 chr6:127447740:- ONLY_REF_SPLICE YES 614 910 0.00 0.00 GT 1.9656 AG 1.9329 0.0068 575 0
SOGA3--KIAA0408 1 0 1.00 0.00 SOGA3^ENSG00000214338.10 9767 chr6:127475302:- KIAA0408^ENSG00000189367.15 19482 chr6:127447740:- ONLY_REF_SPLICE YES 650 910 0.00 0.00 GT 1.9656 AG 1.9329 0.0034 573 0
CPSF6--HOOK1 10 0 10.00 0.00 CPSF6^ENSG00000111605.18 11550 chr12:69262562:+ HOOK1^ENSG00000134709.12 30689 chr1:59847045:+ ONLY_REF_SPLICE YES 1772 1888 0.01 0.01 GT 1.9899 AG 1.9656 0.0339 1616 0
RCN3--FCGRT 9 0 9.00 0.00 RCN3^ENSG00000142552.8 4088 chr19:49537205:+ FCGRT^ENSG00000104870.13 20955 chr19:49526010:+ ONLY_REF_SPLICE YES 878 4688 0.01 0.00 GT 1.9656 AG 1.6402 0.0305 2520 0
RCN3--FCGRT 6 1 6.00 0.43 RCN3^ENSG00000142552.8 5149 chr19:49539179:+ FCGRT^ENSG00000104870.13 20955 chr19:49526010:+ ONLY_REF_SPLICE YES 838 4688 0.01 0.00 GT 1.8892 AG 1.6402 0.0218 1734 0
RCN3--FCGRT 5 1 5.00 0.36 RCN3^ENSG00000142552.8 6349 chr19:49542752:+ FCGRT^ENSG00000104870.13 20955 chr19:49526010:+ ONLY_REF_SPLICE YES 1033 4688 0.01 0.00 GT 1.5656 AG 1.6402 0.0181 571 0
RCN3--FCGRT 1 1 1.00 0.07 RCN3^ENSG00000142552.8 5149 chr19:49539179:+ FCGRT^ENSG00000104870.13 19452 chr19:49524507:+ ONLY_REF_SPLICE YES 838 4852 0.00 0.00 GT 1.8892 AG 1.6049 0.0036 2055 0
RCN3--FCGRT 1 1 1.00 0.07 RCN3^ENSG00000142552.8 6265 chr19:49542668:+ FCGRT^ENSG00000104870.13 19452 chr19:49524507:+ ONLY_REF_SPLICE YES 1187 4852 0.00 0.00 GT 1.6729 AG 1.6049 0.0036 1163 0
RCN3--FCGRT 1 1 1.00 0.07 RCN3^ENSG00000142552.8 6265 chr19:49542668:+ FCGRT^ENSG00000104870.13 20955 chr19:49526010:+ ONLY_REF_SPLICE YES 1187 4688 0.00 0.00 GT 1.6729 AG 1.6402 0.0036 648 0
HIVEP3--AL353613.1 4 0 4.00 0.00 HIVEP3^ENSG00000127124.16 12121 chr1:41628749:- AL353613.1^ENSG00000232211.1 32940 chr9:86632137:+ INCL_NON_REF_SPLICE YES 103 0 0.05 5.00 GT 1.9656 AG 1.9656 0.0136 2335 0
46 rows