File Info
- Filename
- ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.starfusion.starfusion.fusion_predictions.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/starfusion/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.starfusion.starfusion.fusion_predictions.tsv
- Size
- 269.4 KB
- Workflow Run
- dev_rna_exp0008_exp0011-e7be3c7a_b
- Published
- May 28, 2026 5:47 PM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | SpliceType | LeftGene | LeftBreakpoint | RightGene | RightBreakpoint | JunctionReads | SpanningFrags | LargeAnchorSupport | FFPM | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | annots |
| PRB2--PRH2 | 148 | 0 | 147.98 | 0.00 | ONLY_REF_SPLICE | PRB2^ENSG00000121335.12 | chr12:11392794:- | PRH2^ENSG00000134551.13 | chr12:10932226:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1101:13709:12672,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1104:38513:20015,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1108:27082:4671,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1117:44791:10570,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1117:46563:2149,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1132:50300:13891,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1133:28207:11019,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1134:3014:11775,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1144:13273:21192,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1148:42550:21542,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1151:25602:27721,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1155:7027:10402,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1162:14001:8805,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1166:25011:11874,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1188:24914:5680,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1209:13556:25522,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1230:28158:1799,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1231:10619:22285,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1256:46223:21570,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1260:23175:10066,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1272:14106:28408,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1278:6331:14410,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1292:21589:10570,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1293:51611:24260,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1296:44468:20519,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1305:19793:1042,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1306:49305:8609,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1316:27592:19566,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1321:17034:16049,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1327:44637:21878,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1335:40042:27792,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1343:13661:12420,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1343:38036:5512,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1344:37882:19062,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1348:29420:8637,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1351:14494:21738,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1351:16428:7992,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1356:33926:10921,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1358:27487:4335,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1358:33983:5246,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1369:32260:3634,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1376:5757:6549,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1381:43052:3354,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1396:39258:3172,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1436:50478:19356,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1440:31791:10332,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1441:51271:18880,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1476:6590:18081,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1488:9236:22999,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2113:47331:18950,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2121:34938:24190,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2125:12399:14886,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2131:6898:3816,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2136:45479:22775,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2146:12237:23406,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2147:33182:22046,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2167:38352:18810,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2198:49686:7530,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2206:10441:10458,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2208:34614:2247,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2211:20537:29711,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2233:17706:14214,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2245:28652:16273,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2251:16047:5596,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2261:35277:26208,&ColoN_FFPE_L01_RNA_01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8:1212:37623:10430,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1214:46110:1813,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1221:18749:23896,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1273:29542:26362,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1312:28870:17324,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1321:11201:12532,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1377:21759:24344,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1470:49589:18403,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1489:37478:13149,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2180:38489:27203,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2257:25941:18613,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2272:43117:18824,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2292:24024:6745,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2305:39864:24288,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2324:49241:17240,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2402:4964:18151,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2421:30585:9758,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2468:4212:25143 | . | YES_LDAS | 0.5722 | GT | 1.8892 | AG | 1.3996 | ["DGD_PARALOGS","INTRACHROMOSOMAL[chr12:0.46Mb]"] |
| PRH2--PRB2 | 48 | 0 | 48.00 | 0.00 | ONLY_REF_SPLICE | PRH2^ENSG00000134551.13 | chr12:10931080:+ | PRB2^ENSG00000121335.12 | chr12:11391648:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1116:3435:26741,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1149:9486:18417,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1155:11922:20309,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1156:3953:13037,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1173:24291:16119,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1208:42833:18193,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1229:48432:14914,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1293:34784:23840,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1297:4107:16834,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1321:4705:8679,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1390:15772:7530,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1391:45697:29123,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1394:45689:3774,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1414:17018:24513,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1489:20570:24611,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2101:10465:21150,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2107:9632:27862,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2141:5288:11201,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2183:10101:24779,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2190:2327:8146,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2205:22115:23055,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2228:8985:22004,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2260:13620:29445,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2312:8338:3929,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2314:43028:9029,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2465:45851:20449,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1115:32276:19160,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1150:10053:17072,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1215:40746:5050,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1242:50891:29515,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1312:33150:26054,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1313:2335:13121,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1428:17601:25578,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1448:3200:12630,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1481:33554:22915,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2115:5676:18123,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2150:24679:22173,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2257:47566:3466,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1168:8394:10865,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1198:33158:24190,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2301:10490:11383,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1126:19469:11075,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1272:6906:20561,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1442:4657:17310,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1453:13936:23966,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2151:16953:28352,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2373:3945:11313,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2386:9430:1701 | . | YES_LDAS | 0.1856 | GT | 1.8062 | AG | 1.3996 | ["DGD_PARALOGS","INTRACHROMOSOMAL[chr12:0.46Mb]"] |
| PRH1--PRB3 | 23 | 0 | 11.50 | 0.00 | INCL_NON_REF_SPLICE | PRH1^ENSG00000231887.7 | chr12:10882217:- | PRB3^ENSG00000197870.12 | chr12:11267332:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1123:8216:9015,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1132:9519:8216,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1138:21290:25718,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1164:16654:14186,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1203:42850:1995,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1247:11986:10192,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1272:21557:25423,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1307:7245:9463,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1329:10206:12574,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1364:9842:16035,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1415:12496:28842,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1441:13192:2415,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2104:32106:22369,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2138:46264:5778,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2150:33109:14158,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2164:42664:10697,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2211:16274:27932,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2337:51271:12350,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2485:36588:23574,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1214:41919:10416,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2316:2092:1490,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2481:27875:27007,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2285:10117:8160 | . | NO_LDAS | 0.0445 | GT | 1.8892 | AG | 1.5656 | ["DGD_PARALOGS","INTRACHROMOSOMAL[chr12:0.09Mb]","LOCAL_REARRANGEMENT:-:[94316]"] |
| TPBG--CARM1 | 18 | 0 | 14.23 | 0.00 | INCL_NON_REF_SPLICE | TPBG^ENSG00000146242.9 | chr6:82365098:+ | CARM1^ENSG00000142453.12 | chr19:10871591:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1102:31224:11229,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1148:14802:5988,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1152:26289:3999,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2338:50527:12238,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1328:18118:18599,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1467:3977:21290,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1480:45171:14760,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2309:7610:20743,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2342:26047:28156,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1101:15594:19804,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1226:3071:4783,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1361:39775:22509,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2120:34088:6997,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2254:13677:8413,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2268:46765:27525,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2461:26548:7053,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1335:49750:17058,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2489:2723:22649 | . | NO_LDAS | 0.055 | GT | 1.3710 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr6--chr19]"] |
| RN7SL674P--RN7SL494P | 16 | 0 | 15.05 | 0.00 | INCL_NON_REF_SPLICE | RN7SL674P^ENSG00000239899.3 | chr2:11584878:+ | RN7SL494P^ENSG00000241175.3 | chr15:50244810:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2104:23563:2387,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2163:46175:18571,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2211:25658:20561,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2215:31791:4867,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2318:9980:1785,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2438:38174:18249,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1439:29202:28128,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2261:32171:25620,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2374:45188:18151,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1369:1194:21290,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2243:22560:3901,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2373:48771:12140,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1176:10506:10150,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1277:24987:15251,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1372:49459:22579,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2432:41741:7782 | . | YES_LDAS | 0.0582 | GT | 1.9086 | AG | 1.9656 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr2--chr15]"] |
| HLA-C--MUC16 | 13 | 0 | 13.00 | 0.00 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269489:- | MUC16^ENSG00000181143.15 | chr19:8848985:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1159:40398:26474,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1169:13604:29445,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1170:21282:12532,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1174:48424:16610,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1260:11201:8721,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1380:15279:7740,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1457:15530:13359,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1457:47089:1042,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1473:29145:7123,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2137:36094:8679,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2251:37478:8609,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2359:3734:7922,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2449:12892:29165 | . | NO_LDAS | 0.0503 | GT | 1.9656 | AG | 1.8062 | ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr6--chr19]"] |
| JUND--CCDC13 | 10 | 0 | 9.90 | 0.00 | INCL_NON_REF_SPLICE | JUND^ENSG00000130522.6 | chr19:18280504:- | CCDC13^ENSG00000244607.7 | chr3:42739711:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1163:35277:12224,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1182:15594:13499,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1185:25820:6213,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1246:31548:12854,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1249:35803:8959,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1331:3637:26082,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1423:15287:3298,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1479:43295:23280,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1115:49313:3466,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2329:23725:16456 | . | NO_LDAS | 0.0383 | GT | 1.7465 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr19--chr3]"] |
| IGL-@-ext--PPM1F-AS1 | 8 | 0 | 8.00 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22900976:- | PPM1F-AS1^ENSG00000224086.6 | chr22:21974013:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1216:23668:19833,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1346:27470:21990,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1443:8402:12756,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1125:19364:18431,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2271:41822:17002,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2324:3484:20631,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2169:50236:5372,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2353:12083:8791 | . | NO_LDAS | 0.0309 | CT | 1.9086 | AC | 1.9656 | ["INTRACHROMOSOMAL[chr22:0.05Mb]","LOCAL_INVERSION:-:+:[53302]"] |
| IGL-@-ext--CACNA1D | 8 | 0 | 8.00 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22895371:- | CACNA1D^ENSG00000157388.19 | chr3:53782559:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1103:48828:26671,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1117:19170:17198,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1164:4794:2695,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1258:36086:22957,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2385:42445:29235,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2412:32341:21682,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2421:30270:17955,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1218:37292:28184 | . | NO_LDAS | 0.0309 | GT | 1.8256 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr22--chr3]"] |
| SPATC1--IGL@-ext | 7 | 0 | 7.00 | 0.00 | INCL_NON_REF_SPLICE | SPATC1^ENSG00000186583.12 | chr8:144040803:+ | IGL@-ext^IGL.g@-ext | chr22:22895371:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1127:18669:8034,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1167:8831:1364,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1175:32939:24821,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1263:5700:6731,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1361:32664:13695,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1448:17204:25844,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2397:8613:16904 | . | NO_LDAS | 0.0271 | CT | 1.7232 | AC | 1.8256 | ["INTERCHROMOSOMAL[chr8--chr22]"] |
| KANSL1--ARL17A | 7 | 0 | 3.50 | 0.00 | ONLY_REF_SPLICE | KANSL1^ENSG00000120071.15 | chr17:46094560:- | ARL17A^ENSG00000185829.18 | chr17:46570869:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1106:40859:16624,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1108:32122:13653,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1137:49427:12238,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1203:3678:15839,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1344:6954:23868,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1387:51781:1042,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2179:45204:11509 | . | YES_LDAS | 0.0135 | GT | 1.8892 | AG | 1.7056 | ["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","INTRACHROMOSOMAL[chr17:0.29Mb]"] |
| AC099778.1--SLC6A8 | 7 | 0 | 7.00 | 0.00 | INCL_NON_REF_SPLICE | AC099778.1^ENSG00000260236.1 | chr3:47380520:- | SLC6A8^ENSG00000130821.17 | chrX:153688033:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2335:40099:16428,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1229:16144:2429,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1263:5328:13205,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2380:29776:7376,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2498:49119:22775,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1231:3451:4685,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1301:13815:25297 | . | NO_LDAS | 0.0271 | GT | 1.9329 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr3--chrX]"] |
| STATH--FGA | 6 | 0 | 6.00 | 0.00 | INCL_NON_REF_SPLICE | STATH^ENSG00000126549.11 | chr4:69999809:+ | FGA^ENSG00000171560.16 | chr4:154590638:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1245:28457:4055,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2222:32470:1056,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1170:23167:15965,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1430:7464:27301,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2340:18725:24387,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2118:30237:25858 | . | NO_LDAS | 0.0232 | GT | 1.8256 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr4:84.58Mb]"] |
| GOLGA2P8--ZNF774 | 6 | 0 | 6.00 | 0.00 | INCL_NON_REF_SPLICE | GOLGA2P8^ENSG00000214433.4 | chr15:90295226:+ | ZNF774^ENSG00000196391.11 | chr15:90354642:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1192:41151:4937,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1229:22722:27469,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1239:2116:18067,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2417:11557:16652,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2108:47380:1771,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2198:28919:28618 | . | YES_LDAS | 0.0232 | GT | 1.5329 | AG | 1.9899 | ["INTRACHROMOSOMAL[chr15:0.06Mb]","NEIGHBORS[56601]"] |
| CHCHD10--AC005064.1 | 6 | 0 | 6.00 | 0.00 | INCL_NON_REF_SPLICE | CHCHD10^ENSG00000250479.9 | chr22:23767834:- | AC005064.1^ENSG00000234715.2 | chr7:103446122:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1102:37421:10276,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1123:50543:26530,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1141:8677:23966,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1221:47655:17184,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1449:36984:8398,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1468:39339:22705 | . | NO_LDAS | 0.0232 | GT | 1.6402 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr22--chr7]"] |
| MMP24OS--SLC2A9 | 5 | 0 | 5.00 | 0.00 | INCL_NON_REF_SPLICE | MMP24OS^ENSG00000126005.17 | chr20:35277769:- | SLC2A9^ENSG00000109667.12 | chr4:10035220:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1158:17067:12098,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1198:20796:2135,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1231:30059:19384,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2374:44379:22046,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1205:26532:15545 | . | NO_LDAS | 0.0193 | GT | 1.3383 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr20--chr4]"] |
| GTF2E2--SLC6A8 | 5 | 0 | 4.80 | 0.00 | INCL_NON_REF_SPLICE | GTF2E2^ENSG00000197265.9 | chr8:30658137:- | SLC6A8^ENSG00000130821.17 | chrX:153688033:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1464:6275:15769,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1374:35180:14970,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1412:47930:7852,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2263:20278:4629,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2315:25950:6549 | . | NO_LDAS | 0.0186 | GT | 1.2419 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr8--chrX]"] |
| AC104123.1--CAST | 5 | 0 | 5.00 | 0.00 | ONLY_REF_SPLICE | AC104123.1^ENSG00000251314.2 | chr5:96379652:+ | CAST^ENSG00000153113.24 | chr5:96675539:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1213:34023:10893,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1396:22439:11061,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1497:13717:9379,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1390:48593:22761,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2146:48003:4503 | . | YES_LDAS | 0.0193 | GT | 1.7819 | AG | 1.8295 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.11Mb]"] |
| IGL-@-ext--STMN3 | 4 | 0 | 4.00 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22900976:- | STMN3^ENSG00000197457.10 | chr20:63640245:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1253:24623:5148,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1452:24469:4994,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2496:25189:2093,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1304:8847:7502 | . | NO_LDAS | 0.0155 | CT | 1.9086 | TT | 1.8295 | ["INTERCHROMOSOMAL[chr22--chr20]"] |
| HLA-C--NUMA1 | 4 | 0 | 4.00 | 0.00 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269493:- | NUMA1^ENSG00000137497.18 | chr11:72013673:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1169:21702:1715,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1272:27001:12826,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1340:22527:6507,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1265:43837:22845 | . | NO_LDAS | 0.0155 | GT | 1.8256 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr6--chr11]"] |
| AL139383.1--STARD13 | 4 | 0 | 4.00 | 0.00 | ONLY_REF_SPLICE | AL139383.1^ENSG00000230490.3 | chr13:33359465:- | STARD13^ENSG00000133121.21 | chr13:33167622:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1119:22018:13247,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1120:32972:12938,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1184:22544:13177,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1219:46086:7488 | . | YES_LDAS | 0.0155 | GT | 1.6895 | AG | 1.6402 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.00Mb]","NEIGHBORS[4576]"] |
| ZFP64--SIGLEC12 | 3 | 0 | 3.00 | 0.00 | INCL_NON_REF_SPLICE | ZFP64^ENSG00000020256.20 | chr20:52160119:- | SIGLEC12^ENSG00000254521.7 | chr19:51499621:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1177:14421:18978,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1252:32794:10024,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2120:16444:10626 | . | NO_LDAS | 0.0116 | GT | 1.9329 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr20--chr19]"] |
| XIAP--ZBTB4 | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | XIAP^ENSG00000101966.13 | chrX:123860293:+ | ZBTB4^ENSG00000174282.12 | chr17:7467327:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1162:36701:29375,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1190:8710:16147,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1216:51207:25017 | . | NO_LDAS | 0.0116 | GT | 1.5058 | AG | 1.5219 | ["INTERCHROMOSOMAL[chrX--chr17]"] |
| UMAD1--GLCCI1 | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | UMAD1^ENSG00000219545.11 | chr7:7801743:+ | GLCCI1^ENSG00000106415.13 | chr7:8003908:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1356:23870:19566,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1408:12423:1196,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1488:48545:10907 | . | YES_LDAS | 0.0116 | GT | 1.9656 | AG | 1.7465 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[776]"] |
| TVP23C--CDRT4 | 3 | 0 | 3.00 | 0.00 | INCL_NON_REF_SPLICE | TVP23C^ENSG00000175106.17 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | chr17:15438200:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1108:38311:21598,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1484:46401:3718,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1368:8499:23798 | . | YES_LDAS | 0.0116 | GT | 1.9329 | AG | 1.6402 | ["INTRACHROMOSOMAL[chr17:0.03Mb]","NEIGHBORS[26536]"] |
| TPD52--NCOA2 | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | TPD52^ENSG00000076554.15 | chr8:80171425:- | NCOA2^ENSG00000140396.13 | chr8:70174859:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1122:36758:9015,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1288:21638:24050,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2346:35941:6955 | . | YES_LDAS | 0.0116 | GT | 1.5656 | AG | 1.7819 | ["INTRACHROMOSOMAL[chr8:9.63Mb]"] |
| SPAG1--NAV1 | 3 | 0 | 1.50 | 0.00 | INCL_NON_REF_SPLICE | SPAG1^ENSG00000104450.13 | chr8:100213278:+ | NAV1^ENSG00000134369.15 | chr1:201648719:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1111:37106:8328,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2214:23231:29221,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1288:51279:26320 | . | NO_LDAS | 0.0058 | GC | 0.9183 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr8--chr1]"] |
| SAA4--SAA1 | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | SAA4^ENSG00000148965.10 | chr11:18232395:- | SAA1^ENSG00000173432.12 | chr11:18269717:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1113:43052:12014,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1133:26403:29193,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1422:51393:12028 | . | YES_LDAS | 0.0116 | GT | 1.9329 | AG | 1.7819 | ["DGD_PARALOGS","INTRACHROMOSOMAL[chr11:0.03Mb]","LOCAL_INVERSION:-:+:[29458]"] |
| MZT2B--AC018804.1 | 3 | 0 | 3.00 | 0.00 | INCL_NON_REF_SPLICE | MZT2B^ENSG00000152082.15 | chr2:130182775:+ | AC018804.1^ENSG00000227632.2 | chr2:130202325:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2164:48359:17591,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2273:28093:27413,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1353:13256:9730 | . | YES_LDAS | 0.0116 | GT | 1.7819 | AG | 1.9899 | ["INTRACHROMOSOMAL[chr2:0.01Mb]","NEIGHBORS[11583]"] |
| LEPROTL1--SMG1P1 | 3 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LEPROTL1^ENSG00000104660.19 | chr8:30104991:+ | SMG1P1^ENSG00000237296.9 | chr16:22451620:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1418:44904:27273,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1204:37089:14158,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1435:13362:22411 | . | YES_LDAS | 0.0039 | GC | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr8--chr16]"] |
| LDLRAD3--PRR5L | 3 | 0 | 3.00 | 0.00 | INCL_NON_REF_SPLICE | LDLRAD3^ENSG00000179241.13 | chr11:36098461:+ | PRR5L^ENSG00000135362.14 | chr11:36296290:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1405:9519:26993,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1411:41531:19328,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2309:26880:13849 | . | YES_LDAS | 0.0116 | GT | 1.9329 | AG | 1.8892 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr11:0.06Mb]","NEIGHBORS[64152]"] |
| HIVEP3--GNAS | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | HIVEP3^ENSG00000127124.16 | chr1:42035807:- | GNAS^ENSG00000087460.28 | chr20:58903531:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1242:20465:12098,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2348:42324:23504,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2265:6768:27441 | . | YES_LDAS | 0.0116 | GT | 1.2867 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr1--chr20]"] |
| HIC2--PI4KA | 3 | 0 | 3.00 | 0.00 | ONLY_REF_SPLICE | HIC2^ENSG00000169635.10 | chr22:21442857:+ | PI4KA^ENSG00000241973.11 | chr22:20718822:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1125:47534:14284,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1159:46822:7221,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2233:14041:8314 | . | NO_LDAS | 0.0116 | GT | 1.7465 | AG | 1.8892 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr22:0.56Mb]"] |
| EVC--ACSL6-AS1 | 3 | 0 | 1.50 | 0.00 | INCL_NON_REF_SPLICE | EVC^ENSG00000072840.13 | chr4:5711554:+ | ACSL6-AS1^ENSG00000223548.1 | chr5:132006943:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1122:41604:11271,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1306:44273:20071,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2488:3645:3284 | . | NO_LDAS | 0.0058 | GT | 1.5301 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr4--chr5]"] |
| EVC--AC051619.4 | 3 | 0 | 1.50 | 0.00 | INCL_NON_REF_SPLICE | EVC^ENSG00000072840.13 | chr4:5711554:+ | AC051619.4^ENSG00000259520.6 | chr15:45253779:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1122:41604:11271,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1306:44273:20071,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2488:3645:3284 | . | NO_LDAS | 0.0058 | GT | 1.5301 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr4--chr15]"] |
| CA13--CA3 | 3 | 0 | 3.00 | 0.00 | INCL_NON_REF_SPLICE | CA13^ENSG00000185015.8 | chr8:85281639:+ | CA3^ENSG00000164879.7 | chr8:85439712:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1123:44128:18641,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1183:19801:19861,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1393:24121:3830 | . | YES_LDAS | 0.0116 | GT | 1.7968 | AG | 1.8892 | ["DGD_PARALOGS","ConjoinG","GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr8:0.09Mb]","NEIGHBORS[89363]"] |
| ARL17A--KANSL1 | 3 | 0 | 1.50 | 0.00 | ONLY_REF_SPLICE | ARL17A^ENSG00000185829.18 | chr17:46570759:- | KANSL1^ENSG00000120071.15 | chr17:46094701:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1414:32041:2864,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2176:24954:10963,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2450:5425:29263 | . | YES_LDAS | 0.0058 | GT | 1.6402 | AG | 1.7819 | ["ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr17:0.29Mb]"] |
| ZBTB38--AC240565.1 | 2 | 0 | 0.33 | 0.00 | ONLY_REF_SPLICE | ZBTB38^ENSG00000177311.11 | chr3:141438365:+ | AC240565.1^ENSG00000280136.2 | chr17:106864:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1309:26314:2780,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2181:24704:5512 | . | NO_LDAS | 0.0013 | GT | 1.9329 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr3--chr17]"] |
| TTLL12--STRC | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TTLL12^ENSG00000100304.13 | chr22:43187091:- | STRC^ENSG00000242866.10 | chr15:43601551:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2219:51935:11621,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2378:26217:4069 | . | NO_LDAS | 0.0039 | GT | 1.5546 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr22--chr15]"] |
| TRIP10--CMTM4 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | TRIP10^ENSG00000125733.18 | chr19:6739724:+ | CMTM4^ENSG00000183723.13 | chr16:66696634:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1493:49241:26825,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1170:17957:2093 | . | NO_LDAS | 0.0077 | GT | 1.1589 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr19--chr16]"] |
| TLK2P1--AC110079.1 | 2 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | TLK2P1^ENSG00000226049.3 | chr17:34039043:- | AC110079.1^ENSG00000260404.3 | chr4:118595912:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2118:31896:20071,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1252:5644:28212 | . | YES_LDAS | 0.0007 | GT | 1.7465 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr17--chr4]"] |
| TBKBP1--PDGFC | 2 | 0 | 0.67 | 0.00 | INCL_NON_REF_SPLICE | TBKBP1^ENSG00000198933.9 | chr17:47708852:+ | PDGFC^ENSG00000145431.11 | chr4:156971504:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1202:14171:25830,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1227:3767:26362 | . | NO_LDAS | 0.0026 | GT | 1.5546 | AG | 1.0530 | ["INTERCHROMOSOMAL[chr17--chr4]"] |
| STATH--ZBED6 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | STATH^ENSG00000126549.11 | chr4:69998492:+ | ZBED6^ENSG00000257315.3 | chr1:203799999:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1359:2214:18936,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1409:31847:15166 | . | NO_LDAS | 0.0077 | GT | 1.7968 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr4--chr1]"] |
| STAT4--AC079777.1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | STAT4^ENSG00000138378.19 | chr2:191076227:- | AC079777.1^ENSG00000280083.1 | chr2:191155378:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1163:17633:12406,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1354:33053:4251 | . | YES_LDAS | 0.0077 | GT | 1.9656 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr2:0.00Mb]","LOCAL_REARRANGEMENT:-:[2522]"] |
| SPTBN1--IGL@-ext | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SPTBN1^ENSG00000115306.16 | chr2:54668619:+ | IGL@-ext^IGL.g@-ext | chr22:22770979:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2216:6097:20589,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1160:24113:9898 | . | NO_LDAS | 0.0039 | AG | 1.8892 | CA | 1.2867 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| SPTBN1--IGL@-ext | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SPTBN1^ENSG00000115306.16 | chr2:54668619:+ | IGL@-ext^IGL.g@-ext | chr22:22711518:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2216:6097:20589,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1160:24113:9898 | . | NO_LDAS | 0.0039 | AG | 1.8892 | CA | 1.2867 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| SPCS3--RN7SL454P | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | SPCS3^ENSG00000129128.13 | chr4:176331683:+ | RN7SL454P^ENSG00000243426.3 | chr17:78532998:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1111:4527:3018,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1440:38950:9449 | . | NO_LDAS | 0.0077 | GT | 1.3753 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr4--chr17]"] |
| SOX9--AC132872.5 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | SOX9^ENSG00000125398.8 | chr17:72123946:+ | AC132872.5^ENSG00000287737.1 | chr17:82274591:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1131:51894:26040,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1242:11889:15517 | . | NO_LDAS | 0.0077 | GC | 1.3383 | AG | 1.3710 | ["INTRACHROMOSOMAL[chr17:10.15Mb]"] |
| SH3BP5--ITPR1 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | SH3BP5^ENSG00000131370.16 | chr3:15304103:- | ITPR1^ENSG00000150995.20 | chr3:4627763:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1150:39177:13289,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1231:43473:15349 | . | YES_LDAS | 0.0077 | GT | 1.5546 | AG | 1.9086 | ["INTRACHROMOSOMAL[chr3:10.41Mb]"] |
| SEC24B--SETX | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | SEC24B^ENSG00000138802.11 | chr4:109539667:+ | SETX^ENSG00000107290.14 | chr9:132311856:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1159:3111:12252,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2158:19939:25199 | . | NO_LDAS | 0.0077 | GT | 1.9656 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr4--chr9]"] |
| RTL10--CST5 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | RTL10^ENSG00000215012.9 | chr22:19850205:- | CST5^ENSG00000170367.5 | chr20:23877618:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1432:13370:2303,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2126:3864:24905 | . | NO_LDAS | 0.0077 | GT | 1.8892 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr22--chr20]"] |
| RPS24--PARVA | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | RPS24^ENSG00000138326.21 | chr10:78040225:+ | PARVA^ENSG00000197702.14 | chr11:12530871:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2293:1639:9085,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2403:14672:25802 | . | NO_LDAS | 0.0077 | GT | 1.9086 | AG | 1.4295 | ["INTERCHROMOSOMAL[chr10--chr11]"] |
| RPL7A--RPL7AP28 | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | RPL7A^ENSG00000148303.17 | chr9:133350000:+ | RPL7AP28^ENSG00000184139.8 | chr4:131857572:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1262:30634:15026,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1324:46183:1154 | . | NO_LDAS | 0.0019 | GC | 1.5058 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr9--chr4]"] |
| RPL7A--AC092506.1 | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | RPL7A^ENSG00000148303.17 | chr9:133350000:+ | AC092506.1^ENSG00000215869.4 | chr1:104073280:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1262:30634:15026,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1324:46183:1154 | . | NO_LDAS | 0.0019 | GC | 1.5058 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr9--chr1]"] |
| RNF212--CACNA1D | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | RNF212^ENSG00000178222.13 | chr4:1096765:- | CACNA1D^ENSG00000157388.19 | chr3:53702641:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1206:16784:12168,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2253:37478:7628 | . | YES_LDAS | 0.0077 | GT | 1.8256 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr4--chr3]"] |
| REV3L--CEP128 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | REV3L^ENSG00000009413.16 | chr6:111482750:- | CEP128^ENSG00000100629.17 | chr14:80862873:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1114:43586:2569,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1218:12625:5526 | . | YES_LDAS | 0.0077 | GT | 1.5219 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr6--chr14]"] |
| REPS2--IGL-@-ext | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | REPS2^ENSG00000169891.18 | chrX:16946774:+ | IGL-@-ext^IGL-.g@-ext | chr22:22603357:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1275:31807:25522,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1468:22042:24162 | . | NO_LDAS | 0.0077 | AG | 0.9183 | AC | 1.7819 | ["INTERCHROMOSOMAL[chrX--chr22]"] |
| REEP3--TRAF3IP1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | REEP3^ENSG00000165476.14 | chr10:63610334:+ | TRAF3IP1^ENSG00000204104.12 | chr2:238400117:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1221:30537:5498,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2191:14276:29403 | . | YES_LDAS | 0.0077 | GT | 1.9329 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr10--chr2]"] |
| RBPMS-AS1--MXI1 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | RBPMS-AS1^ENSG00000254109.6 | chr8:30385144:- | MXI1^ENSG00000119950.21 | chr10:110228189:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1103:1647:1168,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1153:32365:10542 | . | YES_LDAS | 0.0077 | GT | 1.7968 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr8--chr10]"] |
| RBM19--BECN1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | RBM19^ENSG00000122965.11 | chr12:113818075:- | BECN1^ENSG00000126581.13 | chr17:42810928:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2146:32939:7221,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1318:15457:5414 | . | YES_LDAS | 0.0077 | GT | 1.9086 | AG | 1.5058 | ["INTERCHROMOSOMAL[chr12--chr17]"] |
| RBM14--RBM4 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | RBM4^ENSG00000173933.21 | chr11:66639700:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1332:31160:23280,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2376:11315:13933 | . | YES_LDAS | 0.0077 | GT | 1.7465 | AG | 1.9086 | ["HGNC_GENEFAM","Greger_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[8733]"] |
| PXT1--STK38 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | PXT1^ENSG00000179165.11 | chr6:36425914:- | STK38^ENSG00000112079.9 | chr6:36540207:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1231:29978:25886,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2305:13014:14410 | . | NO_LDAS | 0.0077 | GT | 1.9329 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr6:0.05Mb]","LOCAL_REARRANGEMENT:-:[51038]"] |
| PRR5L--IGL@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PRR5L^ENSG00000135362.14 | chr11:36462381:+ | IGL@-ext^IGL.g@-ext | chr22:22922592:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1269:35941:29683,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2395:13580:16932 | . | NO_LDAS | 0.0019 | GA | 1.9899 | GC | 1.8256 | ["INTERCHROMOSOMAL[chr11--chr22]"] |
| PRR5L--IGL@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PRR5L^ENSG00000135362.14 | chr11:36462381:+ | IGL@-ext^IGL.g@-ext | chr22:22919533:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1269:35941:29683,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2395:13580:16932 | . | NO_LDAS | 0.0019 | GA | 1.9899 | GC | 1.8256 | ["INTERCHROMOSOMAL[chr11--chr22]"] |
| PRR5L--IGL@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PRR5L^ENSG00000135362.14 | chr11:36462381:+ | IGL@-ext^IGL.g@-ext | chr22:22906340:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1269:35941:29683,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2395:13580:16932 | . | NO_LDAS | 0.0019 | GA | 1.9899 | GC | 1.8256 | ["INTERCHROMOSOMAL[chr11--chr22]"] |
| PRR5L--IGL@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PRR5L^ENSG00000135362.14 | chr11:36462381:+ | IGL@-ext^IGL.g@-ext | chr22:22900974:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1269:35941:29683,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2395:13580:16932 | . | NO_LDAS | 0.0019 | GA | 1.9899 | GC | 1.8256 | ["INTERCHROMOSOMAL[chr11--chr22]"] |
| PPP2R2B--IGL@-ext | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | PPP2R2B^ENSG00000156475.19 | chr5:147081300:- | IGL@-ext^IGL.g@-ext | chr22:22900974:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1148:37559:24779,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1267:22228:26082 | . | NO_LDAS | 0.0077 | CT | 1.9219 | GC | 1.8256 | ["INTERCHROMOSOMAL[chr5--chr22]"] |
| PPP1R1B--ZNF408 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | PPP1R1B^ENSG00000131771.14 | chr17:39629230:+ | ZNF408^ENSG00000175213.3 | chr11:46705691:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1230:14858:20323,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1339:3225:8216 | . | NO_LDAS | 0.0077 | GT | 1.7968 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr17--chr11]"] |
| POLR2J4--UPK3BL1 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | POLR2J4^ENSG00000272655.2 | chr7:44013593:- | UPK3BL1^ENSG00000267368.1 | chr7:102640773:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2244:4875:5330,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2419:46385:14900 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr7:58.62Mb]"] |
| PLXNB3--AP1M2 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | PLXNB3^ENSG00000198753.12 | chrX:153776135:+ | AP1M2^ENSG00000129354.12 | chr19:10574423:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:49127:1799,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2432:24016:2471 | . | NO_LDAS | 0.0077 | GT | 1.6895 | AG | 1.7968 | ["INTERCHROMOSOMAL[chrX--chr19]"] |
| PKD1P6--IGL@-ext | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | PKD1P6^ENSG00000250251.6 | chr16:15133264:- | IGL@-ext^IGL.g@-ext | chr22:22895380:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2160:31693:2709,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2495:2205:9533 | . | NO_LDAS | 0.0077 | GT | 1.9329 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr16--chr22]"] |
| PES1--CRACR2B | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | PES1^ENSG00000100029.18 | chr22:30578932:- | CRACR2B^ENSG00000177685.17 | chr11:828656:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1122:32082:19524,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1321:43270:10458 | . | NO_LDAS | 0.0077 | GT | 1.5058 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr22--chr11]"] |
| PDE4DIP--GRIP2 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PDE4DIP^ENSG00000178104.19 | chr1:148966644:+ | GRIP2^ENSG00000144596.13 | chr3:14556044:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2367:29331:28941,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2268:32551:1953 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr1--chr3]"] |
| PAX9--RBM47 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | PAX9^ENSG00000198807.13 | chr14:36657900:+ | RBM47^ENSG00000163694.15 | chr4:40438924:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1208:25343:16960,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2473:17908:6381 | . | YES_LDAS | 0.0077 | GT | 1.8256 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr14--chr4]"] |
| PA2G4--P2RX5 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | PA2G4^ENSG00000170515.14 | chr12:56107256:+ | P2RX5^ENSG00000083454.22 | chr17:3690244:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2414:26346:4013,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2461:46126:11369 | . | NO_LDAS | 0.0077 | GT | 1.9086 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr12--chr17]"] |
| OAZ2--SHARPIN | 2 | 0 | 0.67 | 0.00 | INCL_NON_REF_SPLICE | OAZ2^ENSG00000180304.14 | chr15:64703235:- | SHARPIN^ENSG00000179526.17 | chr8:144103740:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1185:7068:13443,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1365:46506:8441 | . | NO_LDAS | 0.0026 | GT | 0.9183 | AG | 0.8366 | ["INTERCHROMOSOMAL[chr15--chr8]"] |
| NEAT1--HNRNPC | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | NEAT1^ENSG00000245532.9 | chr11:65444063:+ | HNRNPC^ENSG00000092199.18 | chr14:21234229:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1354:18604:3662,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1411:3662:7936 | . | YES_LDAS | 0.0077 | GT | 1.9899 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr11--chr14]"] |
| MYL12A--AKAP6 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | MYL12A^ENSG00000101608.13 | chr18:3255824:+ | AKAP6^ENSG00000151320.11 | chr14:32821606:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1323:51611:21038,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2410:10562:20561 | . | NO_LDAS | 0.0077 | GT | 1.7465 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr18--chr14]"] |
| MMP15--RGS9 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | MMP15^ENSG00000102996.5 | chr16:58045343:+ | RGS9^ENSG00000108370.17 | chr17:65101216:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1461:6485:20841,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1187:50389:22817 | . | NO_LDAS | 0.0077 | GC | 1.8062 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr16--chr17]"] |
| MFN1--FBXL5 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | MFN1^ENSG00000171109.19 | chr3:179347810:+ | FBXL5^ENSG00000118564.15 | chr4:15625977:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1128:8904:24415,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2289:35010:12938 | . | NO_LDAS | 0.0077 | GT | 1.8295 | AG | 1.4295 | ["INTERCHROMOSOMAL[chr3--chr4]"] |
| MFAP3L--CLCN3 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | MFAP3L^ENSG00000198948.12 | chr4:170027164:- | CLCN3^ENSG00000109572.14 | chr4:169706868:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1397:42510:12504,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1397:42518:12518 | . | YES_LDAS | 0.0077 | GT | 1.9656 | AG | 1.7819 | ["INTRACHROMOSOMAL[chr4:0.26Mb]"] |
| LUC7L3--GGNBP2 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | LUC7L3^ENSG00000108848.16 | chr17:50719831:+ | GGNBP2^ENSG00000278311.5 | chr17:36554820:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:23587:9604,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1284:27090:11103 | . | YES_LDAS | 0.0077 | GT | 1.8062 | AG | 1.5656 | ["INTRACHROMOSOMAL[chr17:14.13Mb]"] |
| LRRC10B--PTP4A3 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | LRRC10B^ENSG00000204950.4 | chr11:61508816:+ | PTP4A3^ENSG00000184489.13 | chr8:141417895:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2252:47744:13639,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2274:10862:6815 | . | NO_LDAS | 0.0077 | GT | 0.9710 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr11--chr8]"] |
| LPCAT1--HOXA4 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | LPCAT1^ENSG00000153395.10 | chr5:1501461:- | HOXA4^ENSG00000197576.14 | chr7:27130388:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1111:49993:22467,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2191:1251:16343 | . | NO_LDAS | 0.0077 | GT | 1.8295 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr5--chr7]"] |
| LEPROT--LEPR | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | LEPROT^ENSG00000213625.9 | chr1:65425378:+ | LEPR^ENSG00000116678.20 | chr1:65565546:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1155:5385:11761,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1295:2658:5106 | . | YES_LDAS | 0.0077 | GT | 1.8256 | AG | 1.9219 | ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr1:0.09Mb]","NEIGHBORS[89682]"] |
| LBH--RTN2 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LBH^ENSG00000213626.13 | chr2:30232437:+ | RTN2^ENSG00000125744.12 | chr19:45496995:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1290:17261:18655,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2460:21176:7754 | . | NO_LDAS | 0.0039 | GT | 1.4716 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr2--chr19]"] |
| KRBOX1--GASK1A | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | KRBOX1^ENSG00000240747.8 | chr3:42942071:+ | GASK1A^ENSG00000144649.9 | chr3:43032267:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1103:44427:19188,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2288:12763:13779 | . | NO_LDAS | 0.0077 | GT | 1.7968 | AG | 1.5656 | ["INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS[36475]"] |
| KMT2B--ZBTB44 | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | KMT2B^ENSG00000272333.7 | chr19:35722582:+ | ZBTB44^ENSG00000196323.14 | chr11:130230791:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1134:42380:10626,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2415:36369:24344 | . | NO_LDAS | 0.0019 | GT | 1.7465 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr19--chr11]"] |
| KMT2B--IGL-@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | KMT2B^ENSG00000272333.7 | chr19:35722581:+ | IGL-@-ext^IGL-.g@-ext | chr22:22860684:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1134:42380:10626,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2415:36369:24344 | . | NO_LDAS | 0.0019 | TG | 1.6895 | CT | 1.9329 | ["INTERCHROMOSOMAL[chr19--chr22]"] |
| KMT2B--AAMDC | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | KMT2B^ENSG00000272333.7 | chr19:35722582:+ | AAMDC^ENSG00000087884.14 | chr11:77900584:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1134:42380:10626,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2415:36369:24344 | . | NO_LDAS | 0.0019 | GT | 1.7465 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr19--chr11]"] |
| KLLN--IGL@-ext | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | KLLN^ENSG00000227268.5 | chr10:87860456:- | IGL@-ext^IGL.g@-ext | chr22:22899625:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2273:46191:21878,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1489:1186:23826 | . | NO_LDAS | 0.0077 | CT | 1.8892 | TA | 1.7968 | ["INTERCHROMOSOMAL[chr10--chr22]"] |
| KCNH5--NCOA3 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KCNH5^ENSG00000140015.20 | chr14:62950140:- | NCOA3^ENSG00000124151.19 | chr20:47651078:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1172:38133:19160,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1249:2214:23532 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr14--chr20]"] |
| ITGA9--CD46 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | ITGA9^ENSG00000144668.12 | chr3:37542585:+ | CD46^ENSG00000117335.20 | chr1:207757014:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1110:25383:21290,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1271:51635:1238 | . | YES_LDAS | 0.0077 | GT | 1.9219 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr3--chr1]"] |
| IGL@-ext--INPP5D | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22124423:+ | INPP5D^ENSG00000168918.14 | chr2:233204262:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1188:9017:2555,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2124:51198:22565 | . | NO_LDAS | 0.0077 | GT | 1.8892 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr22--chr2]"] |
| IGL-@-ext--LZTR1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22900974:- | LZTR1^ENSG00000099949.21 | chr22:20990555:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1381:5692:26026,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2333:2804:29543 | . | NO_LDAS | 0.0077 | GC | 1.8256 | GG | 1.9656 | ["INTRACHROMOSOMAL[chr22:1.03Mb]"] |
| IGL-@-ext--L3MBTL4 | 2 | 0 | 1.50 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22922593:- | L3MBTL4^ENSG00000154655.16 | chr18:5955552:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2107:30965:27399,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2481:7496:19258 | . | NO_LDAS | 0.0058 | TG | 1.9086 | GA | 1.7232 | ["INTERCHROMOSOMAL[chr22--chr18]"] |
| IGL-@-ext--L3MBTL4 | 2 | 0 | 1.50 | 0.00 | INCL_NON_REF_SPLICE | IGL-@-ext^IGL-.g@-ext | chr22:22906341:- | L3MBTL4^ENSG00000154655.16 | chr18:5955552:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2107:30965:27399,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2275:28304:9646 | . | NO_LDAS | 0.0058 | TG | 1.9086 | GA | 1.7232 | ["INTERCHROMOSOMAL[chr22--chr18]"] |
| HLA-C--RFPL1S | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269489:- | RFPL1S^ENSG00000225465.10 | chr22:29470603:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1204:22083:6353,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1109:52161:19804 | . | NO_LDAS | 0.0077 | GT | 1.9656 | AG | 1.6729 | ["INTERCHROMOSOMAL[chr6--chr22]"] |
| GTF2A1--FKRP | 2 | 0 | 1.46 | 0.00 | INCL_NON_REF_SPLICE | GTF2A1^ENSG00000165417.12 | chr14:81220931:- | FKRP^ENSG00000181027.11 | chr19:46746069:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1209:46021:17240,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2371:31912:14718 | . | NO_LDAS | 0.0056 | GT | 1.1589 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr14--chr19]"] |
| GPS1--AC091874.2 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | GPS1^ENSG00000169727.12 | chr17:82051964:+ | AC091874.2^ENSG00000249287.1 | chr5:180970442:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2114:15335:12798,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1429:51490:22509 | . | NO_LDAS | 0.0077 | GT | 1.8892 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr17--chr5]"] |
| GPR132--EPS15 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | GPR132^ENSG00000183484.12 | chr14:105057938:- | EPS15^ENSG00000085832.17 | chr1:51445045:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1227:7707:28450,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2113:31702:22145 | . | NO_LDAS | 0.0077 | GT | 1.8295 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr14--chr1]"] |
| FUBP3--C1RL | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | FUBP3^ENSG00000107164.16 | chr9:130595588:+ | C1RL^ENSG00000139178.11 | chr12:7102087:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1102:30334:13443,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2442:38716:16806 | . | YES_LDAS | 0.0077 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr9--chr12]"] |
| EXTL3--SRP68 | 2 | 0 | 0.22 | 0.00 | INCL_NON_REF_SPLICE | EXTL3^ENSG00000012232.9 | chr8:28701640:+ | SRP68^ENSG00000167881.15 | chr17:76072466:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:33053:15293,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2130:37615:17030 | . | NO_LDAS | 0.0009 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr8--chr17]"] |
| EXTL3--SNX5 | 2 | 0 | 0.22 | 0.00 | INCL_NON_REF_SPLICE | EXTL3^ENSG00000012232.9 | chr8:28701640:+ | SNX5^ENSG00000089006.17 | chr20:17968498:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:33053:15293,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2130:37615:17030 | . | NO_LDAS | 0.0009 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr8--chr20]"] |
| EXTL3--SIX3 | 2 | 0 | 0.22 | 0.00 | INCL_NON_REF_SPLICE | EXTL3^ENSG00000012232.9 | chr8:28701640:+ | SIX3^ENSG00000138083.5 | chr2:44942292:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:33053:15293,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2130:37615:17030 | . | NO_LDAS | 0.0009 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr8--chr2]"] |
| EXTL3--NBPF26 | 2 | 0 | 0.22 | 0.00 | INCL_NON_REF_SPLICE | EXTL3^ENSG00000012232.9 | chr8:28701640:+ | NBPF26^ENSG00000273136.7 | chr1:120724130:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:33053:15293,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2130:37615:17030 | . | NO_LDAS | 0.0009 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr8--chr1]"] |
| EXTL3--GNAQ | 2 | 0 | 0.22 | 0.00 | INCL_NON_REF_SPLICE | EXTL3^ENSG00000012232.9 | chr8:28701640:+ | GNAQ^ENSG00000156052.11 | chr9:78031608:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:33053:15293,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2130:37615:17030 | . | NO_LDAS | 0.0009 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr8--chr9]"] |
| EXTL3--FOXO3B | 2 | 0 | 0.22 | 0.00 | INCL_NON_REF_SPLICE | EXTL3^ENSG00000012232.9 | chr8:28701640:+ | FOXO3B^ENSG00000240445.6 | chr17:18673055:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:33053:15293,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2130:37615:17030 | . | NO_LDAS | 0.0009 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr8--chr17]"] |
| ETNK2--APP | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | ETNK2^ENSG00000143845.15 | chr1:204141505:- | APP^ENSG00000142192.21 | chr21:25982357:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1122:41151:28898,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1288:5538:10318 | . | NO_LDAS | 0.0077 | GT | 1.9329 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr1--chr21]"] |
| DNM2--OTX1 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | DNM2^ENSG00000079805.18 | chr19:10829268:+ | OTX1^ENSG00000115507.10 | chr2:63051495:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1107:5668:18109,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1190:38667:10276 | . | NO_LDAS | 0.0077 | GT | 1.5301 | AG | 0.9056 | ["INTERCHROMOSOMAL[chr19--chr2]"] |
| DMD--MSN | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | DMD^ENSG00000198947.17 | chrX:31203961:- | MSN^ENSG00000147065.17 | chrX:65716818:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1208:32486:21430,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1296:22358:17899 | . | YES_LDAS | 0.0077 | GT | 1.8892 | AG | 1.8323 | ["INTRACHROMOSOMAL[chrX:32.25Mb]"] |
| CSNK1E--TPTEP2 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | CSNK1E^ENSG00000213923.13 | chr22:38293255:- | TPTEP2^ENSG00000244627.5 | chr22:38336706:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1195:3152:16778,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1197:43812:10697 | . | YES_LDAS | 0.0077 | GT | 1.8892 | AG | 1.6729 | ["INTRACHROMOSOMAL[chr22:0.02Mb]","LOCAL_REARRANGEMENT:-:[17678]"] |
| COX10-AS1--FBXW4 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | COX10-AS1^ENSG00000236088.10 | chr17:14034008:- | FBXW4^ENSG00000107829.15 | chr10:101676436:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1135:24607:26166,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2212:50826:8665 | . | YES_LDAS | 0.0077 | GT | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr17--chr10]"] |
| CLK3--RNF44 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | CLK3^ENSG00000179335.19 | chr15:74620225:+ | RNF44^ENSG00000146083.12 | chr5:176532516:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1308:38076:1266,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1142:40091:18796 | . | YES_LDAS | 0.0077 | GT | 1.7968 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr15--chr5]"] |
| CLASRP--ZNF503-AS2 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CLASRP^ENSG00000104859.15 | chr19:45067594:+ | ZNF503-AS2^ENSG00000237149.5 | chr10:75408336:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1146:3249:6661,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2354:52032:4895 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr19--chr10]"] |
| CLASRP--LRP3 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CLASRP^ENSG00000104859.15 | chr19:45067594:+ | LRP3^ENSG00000130881.14 | chr19:33194464:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1146:3249:6661,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2354:52032:4895 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 0.9710 | ["INTRACHROMOSOMAL[chr19:11.83Mb]"] |
| CHCHD10--ID2 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | CHCHD10^ENSG00000250479.9 | chr22:23767834:- | ID2^ENSG00000115738.10 | chr2:8682033:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2390:12722:12196,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2185:19146:28142 | . | NO_LDAS | 0.0077 | GT | 1.6402 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr22--chr2]"] |
| CFP--POM121 | 2 | 0 | 0.67 | 0.00 | ONLY_REF_SPLICE | CFP^ENSG00000126759.14 | chrX:47627141:- | POM121^ENSG00000196313.11 | chr7:72941837:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1416:2076:18613,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2343:34396:8987 | . | NO_LDAS | 0.0026 | GT | 1.7232 | AG | 1.9656 | ["INTERCHROMOSOMAL[chrX--chr7]"] |
| CDAN1--IGF2BP1 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CDAN1^ENSG00000140326.13 | chr15:42736480:- | IGF2BP1^ENSG00000159217.10 | chr17:49051618:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1118:17034:24485,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1151:8168:3859 | . | NO_LDAS | 0.0039 | GT | 1.2867 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr15--chr17]"] |
| CDAN1--IFITM10 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CDAN1^ENSG00000140326.13 | chr15:42736480:- | IFITM10^ENSG00000244242.2 | chr11:1732851:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1118:17034:24485,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1151:8168:3859 | . | NO_LDAS | 0.0039 | GT | 1.2867 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr15--chr11]"] |
| CCND2--CCND1 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | CCND2^ENSG00000118971.9 | chr12:4274235:+ | CCND1^ENSG00000110092.4 | chr11:69643031:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1180:27090:6479,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2111:51708:18880 | . | NO_LDAS | 0.0077 | GT | 1.9219 | AG | 1.8892 | ["TCGA_StarF2019","CCLE_StarF2019","INTERCHROMOSOMAL[chr12--chr11]"] |
| C8orf88--OLIG1 | 2 | 0 | 0.75 | 0.00 | INCL_NON_REF_SPLICE | C8orf88^ENSG00000253250.3 | chr8:90985236:- | OLIG1^ENSG00000184221.13 | chr21:33070363:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2125:25310:23826,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1180:14494:19468 | . | NO_LDAS | 0.0029 | GC | 1.0530 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr8--chr21]"] |
| BCKDHB--AL359715.4 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | BCKDHB^ENSG00000083123.15 | chr6:80273221:+ | AL359715.4^ENSG00000279022.1 | chr6:80440685:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1170:23579:22509,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1382:16015:7810 | . | YES_LDAS | 0.0077 | GT | 1.9899 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[94460]"] |
| ARF1--EFHB | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | ARF1^ENSG00000143761.16 | chr1:228097715:+ | EFHB^ENSG00000163576.18 | chr3:19933369:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1137:35399:1869,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1282:11339:16189 | . | NO_LDAS | 0.0077 | GT | 1.9086 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr1--chr3]"] |
| ANXA6--FBN3 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | ANXA6^ENSG00000197043.14 | chr5:151124286:- | FBN3^ENSG00000142449.13 | chr19:8138312:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1105:21023:23826,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:15376:2219 | . | NO_LDAS | 0.0077 | GT | 1.9329 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr5--chr19]"] |
| ANPEP--NCOA3 | 2 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ANPEP^ENSG00000166825.15 | chr15:89804827:- | NCOA3^ENSG00000124151.19 | chr20:47651078:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1172:38133:19160,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1249:2214:23532 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr15--chr20]"] |
| AL365356.2--RPL23AP42 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | AL365356.2^ENSG00000228685.1 | chr10:5625040:+ | RPL23AP42^ENSG00000234851.4 | chr3:161429486:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1131:3330:17787,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1423:20028:17675 | . | NO_LDAS | 0.0077 | GT | 1.2729 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr10--chr3]"] |
| AL357972.1--PIGL | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | AL357972.1^ENSG00000286109.1 | chr1:233724923:+ | PIGL^ENSG00000108474.17 | chr17:16299888:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1129:7933:8188,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1247:22487:15797 | . | YES_LDAS | 0.0077 | GT | 1.3383 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| AL157832.1--ADCY9 | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | AL157832.1^ENSG00000227374.1 | chr10:129769077:+ | ADCY9^ENSG00000162104.10 | chr16:3966122:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1235:49144:20659,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1278:47064:8174 | . | NO_LDAS | 0.0077 | GT | 1.9086 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr10--chr16]"] |
| AL138963.3--AC013268.4 | 2 | 0 | 0.67 | 0.00 | INCL_NON_REF_SPLICE | AL138963.3^ENSG00000273149.1 | chr13:45340783:+ | AC013268.4^ENSG00000283283.2 | chr2:110026048:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1121:40552:12700,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1217:9713:27385 | . | NO_LDAS | 0.0026 | GT | 1.9656 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr13--chr2]"] |
| AGAP12P--AC022400.4 | 2 | 0 | 0.67 | 0.00 | INCL_NON_REF_SPLICE | AGAP12P^ENSG00000265018.6 | chr10:48025897:- | AC022400.4^ENSG00000272140.2 | chr10:73713332:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1104:28854:24639,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1221:15797:28786 | . | YES_LDAS | 0.0026 | GT | 1.7465 | AG | 1.9086 | ["INTRACHROMOSOMAL[chr10:25.67Mb]"] |
| AC099778.1--NEXMIF | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | AC099778.1^ENSG00000260236.1 | chr3:47380520:- | NEXMIF^ENSG00000050030.16 | chrX:74925426:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2126:6598:24288,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2407:17843:6521 | . | NO_LDAS | 0.0077 | GT | 1.9329 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr3--chrX]"] |
| AC099654.11--AL627309.5 | 2 | 0 | 0.33 | 0.00 | ONLY_REF_SPLICE | AC099654.11^ENSG00000286436.1 | chr7:57148471:+ | AL627309.5^ENSG00000241860.7 | chr1:173862:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1309:26314:2780,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2181:24704:5512 | . | NO_LDAS | 0.0013 | GT | 1.9329 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr7--chr1]"] |
| AC091390.3--ZCCHC8 | 2 | 0 | 0.67 | 0.00 | INCL_NON_REF_SPLICE | AC091390.3^ENSG00000239969.5 | chr7:102364411:+ | ZCCHC8^ENSG00000033030.15 | chr12:122474046:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:34129:27273,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1273:27883:15054 | . | NO_LDAS | 0.0026 | GT | 1.5058 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr7--chr12]"] |
| AC091390.3--PLEKHB1 | 2 | 0 | 0.67 | 0.00 | INCL_NON_REF_SPLICE | AC091390.3^ENSG00000239969.5 | chr7:102364411:+ | PLEKHB1^ENSG00000021300.14 | chr11:73655898:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:34129:27273,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1273:27883:15054 | . | NO_LDAS | 0.0026 | GT | 1.5058 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr7--chr11]"] |
| AC091390.3--HAMP | 2 | 0 | 0.67 | 0.00 | INCL_NON_REF_SPLICE | AC091390.3^ENSG00000239969.5 | chr7:102364411:+ | HAMP^ENSG00000105697.9 | chr19:35284593:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:34129:27273,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1273:27883:15054 | . | NO_LDAS | 0.0026 | GT | 1.5058 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr7--chr19]"] |
| AC016629.1--RPL23AP53 | 2 | 0 | 2.00 | 0.00 | ONLY_REF_SPLICE | AC016629.1^ENSG00000269032.1 | chr19:58586356:+ | RPL23AP53^ENSG00000223508.5 | chr8:219417:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1176:13669:11173,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2129:16023:13541 | . | YES_LDAS | 0.0077 | GT | 1.7819 | AG | 1.5301 | ["INTERCHROMOSOMAL[chr19--chr8]"] |
| AC007342.2--DMPK | 2 | 0 | 2.00 | 0.00 | INCL_NON_REF_SPLICE | AC007342.2^ENSG00000259962.1 | chr16:53362013:- | DMPK^ENSG00000104936.19 | chr19:45771852:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1107:42380:1603,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1310:19979:4419 | . | NO_LDAS | 0.0077 | GT | 1.6402 | AG | 1.6729 | ["INTERCHROMOSOMAL[chr16--chr19]"] |
| ABI2--IGL@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ABI2^ENSG00000138443.17 | chr2:203328326:+ | IGL@-ext^IGL.g@-ext | chr22:22922595:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1455:5749:3957,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1438:39654:20281 | . | NO_LDAS | 0.0019 | AG | 1.7819 | GG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| ABI2--IGL@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ABI2^ENSG00000138443.17 | chr2:203328326:+ | IGL@-ext^IGL.g@-ext | chr22:22919536:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1455:5749:3957,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1438:39654:20281 | . | NO_LDAS | 0.0019 | AG | 1.7819 | GG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| ABI2--IGL@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ABI2^ENSG00000138443.17 | chr2:203328326:+ | IGL@-ext^IGL.g@-ext | chr22:22906343:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1455:5749:3957,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1438:39654:20281 | . | NO_LDAS | 0.0019 | AG | 1.7819 | GG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| ABI2--IGL@-ext | 2 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ABI2^ENSG00000138443.17 | chr2:203328326:+ | IGL@-ext^IGL.g@-ext | chr22:22900977:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1455:5749:3957,&ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1438:39654:20281 | . | NO_LDAS | 0.0019 | AG | 1.7819 | GG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| ZSCAN9--SALL2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZSCAN9^ENSG00000137185.13 | chr6:28230390:+ | SALL2^ENSG00000165821.12 | chr14:21525377:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2496:16824:13527 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8892 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr6--chr14]"] |
| ZNF880--AC010624.4 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | ZNF880^ENSG00000221923.9 | chr19:52384280:+ | AC010624.4^ENSG00000269540.1 | chr19:50058974:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1204:13515:28758 | . | NO_LDAS | 0.001 | AT | 1.6729 | AC | 1.9086 | ["INTRACHROMOSOMAL[chr19:2.31Mb]"] |
| ZNF827--PIK3C2B | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZNF827^ENSG00000151612.18 | chr4:145938365:- | PIK3C2B^ENSG00000133056.13 | chr1:204433425:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2153:42494:21528 | . | YES_LDAS | 0.0039 | GT | 1.7232 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr4--chr1]"] |
| ZNF800--KLF3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF800^ENSG00000048405.10 | chr7:127391497:- | KLF3^ENSG00000109787.13 | chr4:38689918:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1314:29323:18894 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9656 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr7--chr4]"] |
| ZNF776--ZNF823 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZNF776^ENSG00000152443.13 | chr19:57747091:+ | ZNF823^ENSG00000197933.13 | chr19:11725327:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1127:50373:4209 | . | YES_LDAS | 0.0039 | GT | 1.6895 | AG | 1.9329 | ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:46.01Mb]"] |
| ZNF750--JMJD4 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ZNF750^ENSG00000141579.7 | chr17:82832020:- | JMJD4^ENSG00000081692.13 | chr1:227730533:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1152:42566:19300 | . | NO_LDAS | 0.0019 | GC | 1.7465 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr17--chr1]"] |
| ZNF70--EXOC3L1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF70^ENSG00000187792.5 | chr22:23742510:- | EXOC3L1^ENSG00000179044.16 | chr16:67188892:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2169:25804:11565 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr22--chr16]"] |
| ZNF675--KRTCAP2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ZNF675^ENSG00000197372.10 | chr19:23526127:- | KRTCAP2^ENSG00000163463.13 | chr1:155172892:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1116:38101:8511 | . | NO_LDAS | 0.0019 | GT | 1.7819 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr19--chr1]"] |
| ZNF580--RBM10 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF580^ENSG00000213015.9 | chr19:55635115:+ | RBM10^ENSG00000182872.16 | chrX:47147357:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1170:39694:20351 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr19--chrX]"] |
| ZNF528--AC010332.1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZNF528^ENSG00000167555.14 | chr19:52406643:+ | AC010332.1^ENSG00000277977.1 | chr19:52392659:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1202:1307:20813 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr19:0.01Mb]","LOCAL_REARRANGEMENT:+:[5094]"] |
| ZNF467--CCNI | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF467^ENSG00000181444.13 | chr7:149765149:- | CCNI^ENSG00000118816.11 | chr4:77075747:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2160:17633:28744 | . | NO_LDAS | 0.0039 | GT | 1.2729 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr7--chr4]"] |
| ZNF37BP--GTF2I | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZNF37BP^ENSG00000234420.7 | chr10:42525540:- | GTF2I^ENSG00000263001.7 | chr7:74689124:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1341:14243:12560 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr10--chr7]"] |
| ZNF358--RNPEPL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF358^ENSG00000198816.7 | chr19:7516249:+ | RNPEPL1^ENSG00000142327.13 | chr2:240568629:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1417:29428:12294 | . | NO_LDAS | 0.0039 | GT | 1.1589 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr19--chr2]"] |
| ZNF316--ZNF497 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZNF316^ENSG00000205903.7 | chr7:6652749:+ | ZNF497^ENSG00000174586.11 | chr19:58356678:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2203:17253:28366 | . | YES_LDAS | 0.0039 | GC | 1.9329 | AG | 1.4566 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr7--chr19]"] |
| ZNF251--SNX27 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZNF251^ENSG00000198169.9 | chr8:144753683:- | SNX27^ENSG00000143376.14 | chr1:151638888:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1363:51417:14508 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr8--chr1]"] |
| ZHX3--ATG2A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZHX3^ENSG00000174306.21 | chr20:41204412:- | ATG2A^ENSG00000110046.13 | chr11:64907292:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2133:44063:16484 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr20--chr11]"] |
| ZFX--KLHL15 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZFX^ENSG00000005889.16 | chrX:24179770:+ | KLHL15^ENSG00000174010.9 | chrX:24006700:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2179:1372:28660 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.8892 | ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chrX:0.12Mb]"] |
| ZFP41--GLI4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZFP41^ENSG00000181638.20 | chr8:143251340:+ | GLI4^ENSG00000250571.7 | chr8:143274704:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2252:49370:6143 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.6729 | ["ConjoinG","HGNC_GENEFAM","INTRACHROMOSOMAL[chr8:0.00Mb]","NEIGHBORS[4728]"] |
| ZEB1--ZNF438 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZEB1^ENSG00000148516.22 | chr10:31461237:+ | ZNF438^ENSG00000183621.15 | chr10:30857778:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1115:28538:25634 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 1.8062 | ["DEEPEST2019","TumorFusionsNAR2018","HGNC_GENEFAM","ChimerSeq","INTRACHROMOSOMAL[chr10:0.29Mb]"] |
| ZC3H7B--PRKCZ | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ZC3H7B^ENSG00000100403.12 | chr22:41341150:+ | PRKCZ^ENSG00000067606.17 | chr1:2116245:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2157:22600:26110 | . | NO_LDAS | 0.0019 | GT | 1.7968 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr22--chr1]"] |
| ZC3H7B--C1orf109 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ZC3H7B^ENSG00000100403.12 | chr22:41341150:+ | C1orf109^ENSG00000116922.14 | chr1:37683955:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2157:22600:26110 | . | NO_LDAS | 0.0019 | GT | 1.7968 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr22--chr1]"] |
| ZC3H4--TM9SF2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ZC3H4^ENSG00000130749.10 | chr19:47064624:- | TM9SF2^ENSG00000125304.10 | chr13:99520036:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2275:22552:24120 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr19--chr13]"] |
| ZBTB38--ATL3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ZBTB38^ENSG00000177311.11 | chr3:141438365:+ | ATL3^ENSG00000184743.13 | chr11:63659252:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1142:32616:15909 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr3--chr11]"] |
| YWHAG--DDX24 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | YWHAG^ENSG00000170027.7 | chr7:76327665:- | DDX24^ENSG00000089737.17 | chr14:94051462:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1451:45713:1490 | . | NO_LDAS | 0.0039 | GT | 0.6998 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr7--chr14]"] |
| YWHAE--NR2F2-AS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | YWHAE^ENSG00000108953.17 | chr17:1400047:- | NR2F2-AS1^ENSG00000247809.9 | chr15:96110365:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1150:13192:11719 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr17--chr15]"] |
| XPNPEP1--KCNA3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | XPNPEP1^ENSG00000108039.18 | chr10:109892485:- | KCNA3^ENSG00000177272.9 | chr1:110673523:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1162:44322:6199 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr10--chr1]"] |
| XPC-AS1--KRR1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | XPC-AS1^ENSG00000228242.6 | chr3:14149602:+ | KRR1^ENSG00000111615.14 | chr12:75508446:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1401:33287:7460 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr3--chr12]"] |
| WWP2--ANKRD9 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | WWP2^ENSG00000198373.13 | chr16:69888121:+ | ANKRD9^ENSG00000156381.9 | chr14:102504199:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1324:37648:18151 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr16--chr14]"] |
| WWC1--FAT4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | WWC1^ENSG00000113645.15 | chr5:168397800:+ | FAT4^ENSG00000196159.14 | chr4:125415352:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1287:42170:23602 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr5--chr4]"] |
| WTAP--BTN2A3P | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | WTAP^ENSG00000146457.16 | chr6:159727703:+ | BTN2A3P^ENSG00000124549.14 | chr6:26429982:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2277:12464:4069 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr6:133.29Mb]"] |
| WDTC1--PDX1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | WDTC1^ENSG00000142784.16 | chr1:27287861:+ | PDX1^ENSG00000139515.6 | chr13:27926006:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1381:27155:1378 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr1--chr13]"] |
| WDTC1--AC084030.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | WDTC1^ENSG00000142784.16 | chr1:27307366:+ | AC084030.1^ENSG00000232328.3 | chr2:236754361:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2434:22139:18698 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr1--chr2]"] |
| WASH2P--KDELR3 | 1 | 0 | 0.12 | 0.00 | ONLY_REF_SPLICE | WASH2P^ENSG00000146556.14 | chr2:113598466:+ | KDELR3^ENSG00000100196.11 | chr22:38474523:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2216:1922:19188 | . | NO_LDAS | 0.0005 | GT | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| WARS1--SPTBN1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | WARS1^ENSG00000140105.18 | chr14:100360554:- | SPTBN1^ENSG00000115306.16 | chr2:54637713:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1104:22358:26278 | . | YES_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr14--chr2]"] |
| VWF--ANO2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | VWF^ENSG00000110799.14 | chr12:6095460:- | ANO2^ENSG00000047617.15 | chr12:5832603:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1292:10805:15741 | . | YES_LDAS | 0.0039 | GT | 1.5628 | AG | 1.8295 | ["INTRACHROMOSOMAL[chr12:0.00Mb]","NEIGHBORS[2645]"] |
| VWA7--SLC39A11 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | VWA7^ENSG00000204396.11 | chr6:31767362:- | SLC39A11^ENSG00000133195.11 | chr17:72649268:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1283:30545:27371 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr6--chr17]"] |
| VTI1A--AL158212.1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | VTI1A^ENSG00000151532.14 | chr10:112668998:+ | AL158212.1^ENSG00000225292.2 | chr10:112888735:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1111:39225:27553 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.8892 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr10:0.07Mb]","NEIGHBORS[69991]"] |
| VPS45--PLEKHO1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | VPS45^ENSG00000136631.15 | chr1:150110627:+ | PLEKHO1^ENSG00000023902.14 | chr1:150150912:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2190:38513:10402 | . | YES_LDAS | 0.0039 | GT | 1.4566 | AG | 1.8892 | ["Babiceanu_Normal","INTRACHROMOSOMAL[chr1:0.00Mb]","NEIGHBORS[3854]"] |
| VPS37B--TMEM254-AS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | VPS37B^ENSG00000139722.7 | chr12:122895952:- | TMEM254-AS1^ENSG00000230091.6 | chr10:80049136:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1490:33271:13793 | . | NO_LDAS | 0.0039 | GT | 1.5628 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr12--chr10]"] |
| VN2R17P--CBX6 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | VN2R17P^ENSG00000213014.3 | chr19:56317195:- | CBX6^ENSG00000183741.12 | chr22:38871757:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1113:51263:1575 | . | NO_LDAS | 0.0019 | GT | 1.7819 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr19--chr22]"] |
| VMP1--RFPL3S | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | VMP1^ENSG00000062716.13 | chr17:59839911:+ | RFPL3S^ENSG00000205853.12 | chr22:32363904:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2296:14437:9954 | . | NO_LDAS | 0.0039 | GT | 1.4256 | AG | 1.5058 | ["INTERCHROMOSOMAL[chr17--chr22]"] |
| VASP--KIF13B | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | VASP^ENSG00000125753.14 | chr19:45517834:+ | KIF13B^ENSG00000197892.13 | chr8:29177578:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1285:23636:29193 | . | NO_LDAS | 0.0039 | GT | 1.5301 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr19--chr8]"] |
| USP42--CDK5R2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | USP42^ENSG00000106346.11 | chr7:6154585:+ | CDK5R2^ENSG00000171450.6 | chr2:218961803:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2156:49993:14816 | . | NO_LDAS | 0.0039 | GC | 1.8323 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr7--chr2]"] |
| USP27X--CHD2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | USP27X^ENSG00000273820.2 | chrX:49881959:+ | CHD2^ENSG00000173575.22 | chr15:92985567:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1164:19243:14578 | . | YES_LDAS | 0.0039 | GT | 1.0530 | AG | 1.6895 | ["INTERCHROMOSOMAL[chrX--chr15]"] |
| UQCRH--TSPOAP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | UQCRH^ENSG00000173660.12 | chr1:46303820:+ | TSPOAP1^ENSG00000005379.17 | chr17:58309266:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1142:23692:10234 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| UQCRH--LRRN3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | UQCRH^ENSG00000173660.12 | chr1:46303820:+ | LRRN3^ENSG00000173114.13 | chr7:111099895:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1217:19777:1238 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr1--chr7]"] |
| UQCRH--AL355337.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | UQCRH^ENSG00000173660.12 | chr1:46309127:+ | AL355337.1^ENSG00000287084.1 | chr6:142680229:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2444:48383:19734 | . | NO_LDAS | 0.0039 | GT | 1.5058 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| UPK3BL2--AC004980.3 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | UPK3BL2^ENSG00000284981.1 | chr7:102541093:- | AC004980.3^ENSG00000230305.2 | chr7:76527766:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2352:32187:23406 | . | YES_LDAS | 0.0008 | GT | 1.6729 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr7:26.01Mb]"] |
| UHRF2--ATP13A2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | UHRF2^ENSG00000147854.17 | chr9:6506261:+ | ATP13A2^ENSG00000159363.19 | chr1:16990228:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2366:12666:25437 | . | NO_LDAS | 0.0039 | GT | 1.4295 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr9--chr1]"] |
| UBN2--SFTA3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | UBN2^ENSG00000157741.15 | chr7:139279364:+ | SFTA3^ENSG00000229415.10 | chr14:36473418:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1213:50721:3718 | . | NO_LDAS | 0.0019 | GT | 1.7232 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr7--chr14]"] |
| UBN2--SALL4P2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | UBN2^ENSG00000157741.15 | chr7:139279364:+ | SALL4P2^ENSG00000238040.1 | chrX:129871361:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1213:50721:3718 | . | NO_LDAS | 0.0019 | GT | 1.7232 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr7--chrX]"] |
| UBE2G2--ADGRB1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | UBE2G2^ENSG00000184787.19 | chr21:44768826:- | ADGRB1^ENSG00000181790.11 | chr8:142510932:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2443:1607:12364 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.3753 | ["INTERCHROMOSOMAL[chr21--chr8]"] |
| TXNDC15--CISD2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TXNDC15^ENSG00000113621.15 | chr5:134874536:+ | CISD2^ENSG00000145354.12 | chr4:102869314:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1423:4576:20449 | . | NO_LDAS | 0.0019 | GT | 1.5546 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr5--chr4]"] |
| TXNDC15--AXIN1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TXNDC15^ENSG00000113621.15 | chr5:134874536:+ | AXIN1^ENSG00000103126.15 | chr16:289594:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1423:4576:20449 | . | NO_LDAS | 0.0019 | GT | 1.5546 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr5--chr16]"] |
| TVP23C--CDRT4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TVP23C^ENSG00000175106.17 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | chr17:15440285:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1427:19575:29585 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9899 | ["INTRACHROMOSOMAL[chr17:0.03Mb]","NEIGHBORS[26536]"] |
| TUBGCP5--TCEAL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TUBGCP5^ENSG00000275835.5 | chr15:23030885:- | TCEAL1^ENSG00000172465.14 | chrX:103630308:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1333:17973:12938 | . | NO_LDAS | 0.0039 | GT | 1.8256 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr15--chrX]"] |
| TUBA1B--SDC3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TUBA1B^ENSG00000123416.15 | chr12:49131049:- | SDC3^ENSG00000162512.16 | chr1:30877165:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2131:21128:14424 | . | NO_LDAS | 0.0039 | GC | 1.3710 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr12--chr1]"] |
| TTN--LAMA1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | TTN^ENSG00000155657.28 | chr2:178663266:- | LAMA1^ENSG00000101680.15 | chr18:7023257:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2408:32810:5260 | . | NO_LDAS | 0.001 | GT | 1.8295 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr2--chr18]"] |
| TTN--LAMA1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | TTN^ENSG00000155657.28 | chr2:178659005:- | LAMA1^ENSG00000101680.15 | chr18:7023257:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2408:32810:5260 | . | NO_LDAS | 0.001 | GT | 1.8295 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr2--chr18]"] |
| TTN--LAMA1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | TTN^ENSG00000155657.28 | chr2:178654745:- | LAMA1^ENSG00000101680.15 | chr18:7023257:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2408:32810:5260 | . | NO_LDAS | 0.001 | GT | 1.8295 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr2--chr18]"] |
| TTN--LAMA1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | TTN^ENSG00000155657.28 | chr2:178652096:- | LAMA1^ENSG00000101680.15 | chr18:7023257:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2408:32810:5260 | . | NO_LDAS | 0.001 | GT | 1.8295 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr2--chr18]"] |
| TTC39A--HNRNPUL2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TTC39A^ENSG00000085831.16 | chr1:51300833:- | HNRNPUL2^ENSG00000214753.4 | chr11:62715607:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1127:36264:20911 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr1--chr11]"] |
| TSPAN7--STOX2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TSPAN7^ENSG00000156298.13 | chrX:38612517:+ | STOX2^ENSG00000173320.12 | chr4:184001325:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2429:15441:3312 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9899 | ["INTERCHROMOSOMAL[chrX--chr4]"] |
| TSPAN5--PPP3CA | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TSPAN5^ENSG00000168785.8 | chr4:98658146:- | PPP3CA^ENSG00000138814.17 | chr4:101109078:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1247:19995:20449 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr4:2.36Mb]"] |
| TRPM5--NPIPB2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TRPM5^ENSG00000070985.13 | chr11:2421065:- | NPIPB2^ENSG00000234719.9 | chr16:11927632:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2410:35269:24344 | . | NO_LDAS | 0.0039 | GT | 1.4295 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr11--chr16]"] |
| TRIM44--SRRM2-AS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TRIM44^ENSG00000166326.7 | chr11:35735445:+ | SRRM2-AS1^ENSG00000205913.7 | chr16:2740063:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1342:9446:7278 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr11--chr16]"] |
| TRIM41--AQP3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TRIM41^ENSG00000146063.20 | chr5:181223408:+ | AQP3^ENSG00000165272.16 | chr9:33442090:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1226:52007:28842 | . | YES_LDAS | 0.0039 | GT | 1.3753 | AG | 1.4295 | ["INTERCHROMOSOMAL[chr5--chr9]"] |
| TPST1--CACNA1A | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | TPST1^ENSG00000169902.15 | chr7:66240663:+ | CACNA1A^ENSG00000141837.22 | chr19:13506299:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1226:38141:8721 | . | NO_LDAS | 0.0004 | GT | 1.8295 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr7--chr19]"] |
| TOX4--AC108136.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TOX4^ENSG00000092203.15 | chr14:21488708:+ | AC108136.1^ENSG00000255325.2 | chr8:122486583:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1176:29784:3550 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr14--chr8]"] |
| TOX--SULT1C2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TOX^ENSG00000198846.6 | chr8:58815515:- | SULT1C2^ENSG00000198203.10 | chr2:108308761:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1452:37348:25283 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr8--chr2]"] |
| TOP1MT--RND2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TOP1MT^ENSG00000184428.13 | chr8:143334740:- | RND2^ENSG00000108830.10 | chr17:43029396:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1231:42089:4629 | . | NO_LDAS | 0.0039 | GT | 1.6729 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr8--chr17]"] |
| TNXB--ARCN1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TNXB^ENSG00000168477.19 | chr6:32109181:- | ARCN1^ENSG00000095139.14 | chr11:118590341:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1290:33109:25143 | . | YES_LDAS | 0.0039 | GT | 1.8256 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr6--chr11]"] |
| TNS3--MAP3K7CL | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TNS3^ENSG00000136205.17 | chr7:47280164:- | MAP3K7CL^ENSG00000156265.16 | chr21:29077687:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2139:12213:1953 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr7--chr21]"] |
| TNKS1BP1--SNHG12 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TNKS1BP1^ENSG00000149115.14 | chr11:57309907:- | SNHG12^ENSG00000197989.14 | chr1:28580984:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1357:31637:27021 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr11--chr1]"] |
| TNFSF14--THBS1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TNFSF14^ENSG00000125735.11 | chr19:6669903:- | THBS1^ENSG00000137801.11 | chr15:39582537:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2377:19850:20589 | . | NO_LDAS | 0.0019 | GT | 1.8323 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr19--chr15]"] |
| TNFRSF19--MXI1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TNFRSF19^ENSG00000127863.16 | chr13:23579529:+ | MXI1^ENSG00000119950.21 | chr10:110228189:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1449:17560:5386 | . | YES_LDAS | 0.0039 | GT | 1.7232 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr13--chr10]"] |
| TNFAIP8--ZNF738 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TNFAIP8^ENSG00000145779.8 | chr5:119394378:+ | ZNF738^ENSG00000172687.13 | chr19:21378607:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1478:5231:4209 | . | NO_LDAS | 0.0039 | AT | 1.7232 | AC | 0.0000 | ["INTERCHROMOSOMAL[chr5--chr19]"] |
| TMSB4XP6--TGFBR3L | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMSB4XP6^ENSG00000230043.1 | chr20:50840619:- | TGFBR3L^ENSG00000260001.7 | chr19:7917485:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2408:10757:28268 | . | NO_LDAS | 0.0039 | GT | 1.8256 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr20--chr19]"] |
| TMEM94--NKX2-5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMEM94^ENSG00000177728.17 | chr17:75490758:+ | NKX2-5^ENSG00000183072.10 | chr5:173234088:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1216:51061:6549 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr17--chr5]"] |
| TMEM8B--TCP1P1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMEM8B^ENSG00000137103.20 | chr9:35852973:+ | TCP1P1^ENSG00000229161.2 | chr7:42795425:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2159:4285:19160 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr9--chr7]"] |
| TMEM67--DAPK2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TMEM67^ENSG00000164953.16 | chr8:93763065:+ | DAPK2^ENSG00000035664.11 | chr15:63983754:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2218:6962:21332 | . | NO_LDAS | 0.0039 | GC | 1.9329 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr8--chr15]"] |
| TMEM214--GRID2IP | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMEM214^ENSG00000119777.20 | chr2:27040496:+ | GRID2IP^ENSG00000215045.8 | chr7:6502787:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2475:6105:20183 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr2--chr7]"] |
| TMEM158--TRPM5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMEM158^ENSG00000249992.2 | chr3:45225584:- | TRPM5^ENSG00000070985.13 | chr11:2414828:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2301:17091:17380 | . | NO_LDAS | 0.0039 | GT | 1.3710 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr3--chr11]"] |
| TMEM132B--ERLIN2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMEM132B^ENSG00000139364.10 | chr12:125650953:+ | ERLIN2^ENSG00000147475.17 | chr8:37737838:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1379:45633:26488 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr12--chr8]"] |
| TMEM114--BORCS8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMEM114^ENSG00000232258.6 | chr16:8572175:- | BORCS8^ENSG00000254901.8 | chr19:19180718:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2320:7383:25620 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr16--chr19]"] |
| TMEM104--ABCC5 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TMEM104^ENSG00000109066.14 | chr17:74777738:+ | ABCC5^ENSG00000114770.17 | chr3:183972034:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1112:41507:5974 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr17--chr3]"] |
| TMED3--UBE2L3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMED3^ENSG00000166557.14 | chr15:79414447:+ | UBE2L3^ENSG00000185651.15 | chr22:21621515:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2125:22261:12182 | . | NO_LDAS | 0.0039 | GT | 1.5546 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr15--chr22]"] |
| TMBIM1--PKD1L2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TMBIM1^ENSG00000135926.15 | chr2:218279038:- | PKD1L2^ENSG00000166473.17 | chr16:81175622:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1145:28749:11033 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr16]"] |
| TM9SF2--NOP14 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TM9SF2^ENSG00000125304.10 | chr13:99541667:+ | NOP14^ENSG00000087269.16 | chr4:2950192:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1226:36450:11593 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr13--chr4]"] |
| TM9SF1--BNIPL | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TM9SF1^ENSG00000100926.15 | chr14:24194675:- | BNIPL^ENSG00000163141.20 | chr1:151037315:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2115:44872:20491 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr14--chr1]"] |
| TM7SF2--TMCO3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | TM7SF2^ENSG00000149809.17 | chr11:65113594:+ | TMCO3^ENSG00000150403.18 | chr13:113503594:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1440:44298:11145 | . | NO_LDAS | 0.0019 | GT | 1.7819 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr11--chr13]"] |
| TLN2--GGCT | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TLN2^ENSG00000171914.16 | chr15:62675321:+ | GGCT^ENSG00000006625.18 | chr7:30497672:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2113:5927:18193 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr15--chr7]"] |
| TLL2--RASA3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TLL2^ENSG00000095587.9 | chr10:96397268:- | RASA3^ENSG00000185989.11 | chr13:114017351:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1217:30318:14116 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr10--chr13]"] |
| TLK1--R3HDM1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TLK1^ENSG00000198586.14 | chr2:171160290:- | R3HDM1^ENSG00000048991.16 | chr2:135721924:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1117:8718:21290 | . | YES_LDAS | 0.0039 | GT | 1.4566 | AG | 1.9899 | ["INTRACHROMOSOMAL[chr2:35.27Mb]"] |
| TLE5--KIAA1217 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TLE5^ENSG00000104964.15 | chr19:3054018:- | KIAA1217^ENSG00000120549.18 | chr10:24473448:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1121:8289:29123 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr19--chr10]"] |
| TLE2--TLE1 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | TLE2^ENSG00000065717.15 | chr19:3006420:- | TLE1^ENSG00000196781.16 | chr9:81591052:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2250:2189:26544 | . | NO_LDAS | 0.0019 | GT | 1.8892 | AG | 1.7232 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr9]"] |
| THBS1--DIDO1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | THBS1^ENSG00000137801.11 | chr15:39593426:+ | DIDO1^ENSG00000101191.17 | chr20:62896660:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1396:44168:19945 | . | NO_LDAS | 0.0019 | GT | 1.9656 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr15--chr20]"] |
| THBS1--BAG6 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | THBS1^ENSG00000137801.11 | chr15:39593426:+ | BAG6^ENSG00000204463.13 | chr6:31642771:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1396:44168:19945 | . | NO_LDAS | 0.0019 | GT | 1.9656 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr15--chr6]"] |
| TGFBR3--AKT1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TGFBR3^ENSG00000069702.11 | chr1:91695672:- | AKT1^ENSG00000142208.17 | chr14:104778412:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1177:18450:16792 | . | NO_LDAS | 0.0039 | GT | 1.8256 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr1--chr14]"] |
| TGFBR2--SHLD2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TGFBR2^ENSG00000163513.19 | chr3:30606977:+ | SHLD2^ENSG00000122376.12 | chr10:87180075:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1102:45802:3270 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr3--chr10]"] |
| TFRC--KRT18P16 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TFRC^ENSG00000072274.13 | chr3:196081918:- | KRT18P16^ENSG00000235275.3 | chr5:123636350:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1288:43553:27539 | . | NO_LDAS | 0.0039 | GT | 1.3383 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr3--chr5]"] |
| TFG--KY | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TFG^ENSG00000114354.15 | chr3:100736716:+ | KY^ENSG00000174611.12 | chr3:134610605:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2476:39945:15180 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr3:33.85Mb]"] |
| TET2--MBP | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TET2^ENSG00000168769.14 | chr4:105146979:+ | MBP^ENSG00000197971.16 | chr18:77105286:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2343:50066:2724 | . | YES_LDAS | 0.0039 | GT | 1.4295 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr4--chr18]"] |
| TBL1XR1--PACSIN2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | TBL1XR1^ENSG00000177565.18 | chr3:177197121:- | PACSIN2^ENSG00000100266.19 | chr22:42912157:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1472:41685:4657 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr3--chr22]"] |
| TBC1D27P--RPS4X | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TBC1D27P^ENSG00000128438.10 | chr17:16923225:- | RPS4X^ENSG00000198034.11 | chrX:72272711:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1154:17059:1210 | . | NO_LDAS | 0.0039 | GC | 1.8892 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr17--chrX]"] |
| TAOK1--HEBP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TAOK1^ENSG00000160551.12 | chr17:29495568:+ | HEBP2^ENSG00000051620.11 | chr6:138420352:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1250:42429:23574 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr17--chr6]"] |
| TAF11--SYT7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TAF11^ENSG00000064995.18 | chr6:34887787:- | SYT7^ENSG00000011347.10 | chr11:61518351:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2219:49847:8959 | . | NO_LDAS | 0.0039 | GT | 1.3383 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr6--chr11]"] |
| TACC1--ATXN8OS | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | TACC1^ENSG00000147526.20 | chr8:38843369:+ | ATXN8OS^ENSG00000230223.8 | chr13:70107332:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1156:14624:22887 | . | NO_LDAS | 0.0039 | AT | 1.9086 | AC | 1.8892 | ["INTERCHROMOSOMAL[chr8--chr13]"] |
| SYNDIG1--NFATC2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SYNDIG1^ENSG00000101463.6 | chr20:24584993:+ | NFATC2^ENSG00000101096.20 | chr20:51524110:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1133:2861:13079 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8062 | ["INTRACHROMOSOMAL[chr20:26.72Mb]"] |
| STX6--BAZ2B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | STX6^ENSG00000135823.14 | chr1:180984677:- | BAZ2B^ENSG00000123636.18 | chr2:159419840:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1127:46676:21122 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr1--chr2]"] |
| STX4--RN7SL559P | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | STX4^ENSG00000103496.15 | chr16:31038272:+ | RN7SL559P^ENSG00000240750.3 | chr1:28032130:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1202:28385:22733 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr16--chr1]"] |
| STX4--BAIAP2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | STX4^ENSG00000103496.15 | chr16:31033835:+ | BAIAP2^ENSG00000175866.15 | chr17:81105864:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1301:51943:28114 | . | NO_LDAS | 0.0019 | GT | 1.8256 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr16--chr17]"] |
| STX18-AS1--AC092437.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | STX18-AS1^ENSG00000247708.8 | chr4:4649542:+ | AC092437.1^ENSG00000280310.1 | chr4:4820406:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1449:18636:9576 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9086 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr4:0.03Mb]","NEIGHBORS[33046]"] |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | STX16^ENSG00000124222.22 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | chr20:58691724:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1324:27026:23966 | . | YES_LDAS | 0.0039 | GT | 1.7968 | AG | 1.8256 | ["INTRACHROMOSOMAL[chr20:0.01Mb]","NEIGHBORS[9605]"] |
| STT3B--ARHGAP31 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | STT3B^ENSG00000163527.10 | chr3:31580096:+ | ARHGAP31^ENSG00000031081.11 | chr3:119401822:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2273:15700:23322 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.3383 | ["INTRACHROMOSOMAL[chr3:87.66Mb]"] |
| STIM1--XIST | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | STIM1^ENSG00000167323.12 | chr11:4082351:+ | XIST^ENSG00000229807.12 | chrX:73826284:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2220:8985:23097 | . | NO_LDAS | 0.0039 | GT | 1.5546 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr11--chrX]"] |
| STAT2--AC092418.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | STAT2^ENSG00000170581.14 | chr12:56351292:- | AC092418.2^ENSG00000287502.1 | chr3:57555782:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2140:28498:24471 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr12--chr3]"] |
| STARD13--ZNF644 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | STARD13^ENSG00000133121.21 | chr13:33285470:- | ZNF644^ENSG00000122482.21 | chr1:90982370:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2244:16598:12910 | . | YES_LDAS | 0.0039 | GT | 1.6729 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr13--chr1]"] |
| ST14--AF117829.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ST14^ENSG00000149418.11 | chr11:130197853:+ | AF117829.1^ENSG00000251136.9 | chr8:89757685:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2489:46045:18880 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr11--chr8]"] |
| ST13--ITGA11 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ST13^ENSG00000100380.14 | chr22:40826114:- | ITGA11^ENSG00000137809.17 | chr15:68297466:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1391:36151:21948 | . | YES_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr22--chr15]"] |
| SSU72--UBE2J2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SSU72^ENSG00000160075.12 | chr1:1574478:- | UBE2J2^ENSG00000160087.21 | chr1:1257310:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2150:20044:12126 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr1:0.27Mb]"] |
| SSTR5-AS1--SPG21 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SSTR5-AS1^ENSG00000261713.6 | chr16:1077624:- | SPG21^ENSG00000090487.11 | chr15:64965460:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1231:22948:18081 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr16--chr15]"] |
| SSNA1--SNRNP25 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SSNA1^ENSG00000176101.12 | chr9:137189222:+ | SNRNP25^ENSG00000161981.11 | chr16:53898:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1260:40325:2527 | . | YES_LDAS | 0.0039 | GT | 1.9219 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr9--chr16]"] |
| SSBP4--MRPL23 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SSBP4^ENSG00000130511.16 | chr19:18431862:+ | MRPL23^ENSG00000214026.11 | chr11:1953187:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1133:8645:2107 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr19--chr11]"] |
| SRSF4--SPATA6 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SRSF4^ENSG00000116350.17 | chr1:29181646:- | SPATA6^ENSG00000132122.12 | chr1:48305878:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1252:45171:6773 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr1:19.11Mb]"] |
| SRSF4--MAGI1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SRSF4^ENSG00000116350.17 | chr1:29181646:- | MAGI1^ENSG00000151276.23 | chr3:65361337:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1239:6105:3032 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr1--chr3]"] |
| SRA1--CERCAM | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SRA1^ENSG00000213523.11 | chr5:140552045:- | CERCAM^ENSG00000167123.19 | chr9:128434183:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1126:40374:22453 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr5--chr9]"] |
| SQLE--CIRBP | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SQLE^ENSG00000104549.12 | chr8:124999694:+ | CIRBP^ENSG00000099622.14 | chr19:1271597:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1144:7262:29557 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.6049 | ["INTERCHROMOSOMAL[chr8--chr19]"] |
| SPTBN1--SPTB | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SPTBN1^ENSG00000115306.16 | chr2:54623596:+ | SPTB^ENSG00000070182.21 | chr14:64796715:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1202:29210:27077 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr2--chr14]"] |
| SPTBN1--NAV3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SPTBN1^ENSG00000115306.16 | chr2:54632768:+ | NAV3^ENSG00000067798.16 | chr12:77572221:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1359:23490:17198 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr12]"] |
| SPTBN1--DKK3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SPTBN1^ENSG00000115306.16 | chr2:54629789:+ | DKK3^ENSG00000050165.18 | chr11:11964539:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1166:19680:7235 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr2--chr11]"] |
| SP100--UHRF1BP1L | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SP100^ENSG00000067066.17 | chr2:230466354:+ | UHRF1BP1L^ENSG00000111647.13 | chr12:100142673:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2410:12868:19034 | . | NO_LDAS | 0.0039 | GT | 1.5301 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr2--chr12]"] |
| SP1--AKT2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SP1^ENSG00000185591.10 | chr12:53383622:+ | AKT2^ENSG00000105221.18 | chr19:40255269:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2367:41798:6002 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr12--chr19]"] |
| SOX9--U2AF1L4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SOX9^ENSG00000125398.8 | chr17:72124312:+ | U2AF1L4^ENSG00000161265.15 | chr19:35744888:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1471:8281:10781 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr17--chr19]"] |
| SOX12--NAPRT | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SOX12^ENSG00000177732.9 | chr20:325758:+ | NAPRT^ENSG00000147813.16 | chr8:143578068:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1218:26532:2653 | . | NO_LDAS | 0.0039 | GT | 1.0530 | AG | 1.0530 | ["INTERCHROMOSOMAL[chr20--chr8]"] |
| SOX10--INSR | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SOX10^ENSG00000100146.18 | chr22:37984481:- | INSR^ENSG00000171105.14 | chr19:7117190:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1177:5482:24625 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.0530 | ["INTERCHROMOSOMAL[chr22--chr19]"] |
| SNX30--NUMB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SNX30^ENSG00000148158.17 | chr9:112751157:+ | NUMB^ENSG00000133961.20 | chr14:73322817:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2196:16355:16582 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr9--chr14]"] |
| SND1--LRRC56 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SND1^ENSG00000197157.11 | chr7:128089692:+ | LRRC56^ENSG00000161328.11 | chr11:554341:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1326:32664:18347 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr7--chr11]"] |
| SNCA--SNCG | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SNCA^ENSG00000145335.17 | chr4:89828143:- | SNCG^ENSG00000173267.14 | chr10:86960001:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2201:15044:12966 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr4--chr10]"] |
| SNAI3--HADHB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SNAI3^ENSG00000185669.6 | chr16:88677934:- | HADHB^ENSG00000138029.14 | chr2:26263380:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2417:29501:9057 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr16--chr2]"] |
| SMYD4--AGBL5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SMYD4^ENSG00000186532.12 | chr17:1800599:- | AGBL5^ENSG00000084693.16 | chr2:27052952:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1198:2942:6521 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr17--chr2]"] |
| SMURF2--SUB1 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | SMURF2^ENSG00000108854.16 | chr17:64661829:- | SUB1^ENSG00000113387.12 | chr5:32536638:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2189:49402:22817 | . | YES_LDAS | 0.0019 | GT | 1.9086 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr17--chr5]"] |
| SMURF2--AC021074.3 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | SMURF2^ENSG00000108854.16 | chr17:64661829:- | AC021074.3^ENSG00000243818.5 | chr3:142935841:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2189:49402:22817 | . | YES_LDAS | 0.0019 | GT | 1.9086 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr17--chr3]"] |
| SMCHD1--COP1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SMCHD1^ENSG00000101596.16 | chr18:2656261:+ | COP1^ENSG00000143207.21 | chr1:176027688:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1493:13612:22677 | . | YES_LDAS | 0.0039 | GT | 1.6895 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr18--chr1]"] |
| SMC2--ATF4 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | SMC2^ENSG00000136824.19 | chr9:104102567:+ | ATF4^ENSG00000128272.16 | chr22:39522444:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1470:44209:24891 | . | NO_LDAS | 0.0019 | GT | 1.6729 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr9--chr22]"] |
| SMBD1P--SDHAP1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SMBD1P^ENSG00000283426.1 | chr3:195708841:+ | SDHAP1^ENSG00000185485.14 | chr3:195960086:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2195:41264:10570 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8062 | ["INTRACHROMOSOMAL[chr3:0.25Mb]"] |
| SMAD9--ZMYM2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SMAD9^ENSG00000120693.14 | chr13:36879278:- | ZMYM2^ENSG00000121741.17 | chr13:19993063:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1152:28595:17913 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr13:16.75Mb]"] |
| SLFN11--AC026254.2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SLFN11^ENSG00000172716.16 | chr17:35367541:- | AC026254.2^ENSG00000266313.2 | chr17:27334260:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2361:13742:23294 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.7232 | ["INTRACHROMOSOMAL[chr17:8.00Mb]"] |
| SLC9A3R1--OTUB1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SLC9A3R1^ENSG00000109062.12 | chr17:74763520:+ | OTUB1^ENSG00000167770.12 | chr11:63998238:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1118:25642:11425 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr17--chr11]"] |
| SLC7A5--AC073111.3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SLC7A5^ENSG00000103257.9 | chr16:87851724:- | AC073111.3^ENSG00000284691.1 | chr7:150407584:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1263:4090:18207 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr16--chr7]"] |
| SLC3A2--AC139099.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SLC3A2^ENSG00000168003.18 | chr11:62882066:+ | AC139099.2^ENSG00000262898.3 | chr17:83135761:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1138:49920:22985 | . | NO_LDAS | 0.0039 | GT | 1.5546 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr11--chr17]"] |
| SLC38A4--SLC38A2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SLC38A4^ENSG00000139209.16 | chr12:46784542:- | SLC38A2^ENSG00000134294.14 | chr12:46366945:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2378:25537:17324 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.9329 | ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr12:0.39Mb]"] |
| SLC25A6P5--SLC25A6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SLC25A6P5^ENSG00000228948.2 | chr9:105849819:+ | SLC25A6^ENSG00000169100.14 | chrX:1389727:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1307:48496:12728 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.7465 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr9--chrX]"] |
| SHKBP1--KRBA1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SHKBP1^ENSG00000160410.15 | chr19:40580597:+ | KRBA1^ENSG00000133619.17 | chr7:149719564:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2152:39169:21262 | . | NO_LDAS | 0.0039 | GT | 1.6729 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr19--chr7]"] |
| SHC1--RNF146 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SHC1^ENSG00000160691.19 | chr1:154967671:- | RNF146^ENSG00000118518.16 | chr6:127286616:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1375:26338:18796 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| SH3TC2--POLDIP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SH3TC2^ENSG00000169247.14 | chr5:148995552:- | POLDIP2^ENSG00000004142.12 | chr17:28353310:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2483:39403:15222 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr5--chr17]"] |
| SH3GLB2--MON2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SH3GLB2^ENSG00000148341.18 | chr9:129021091:- | MON2^ENSG00000061987.16 | chr12:62509136:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2127:4001:28534 | . | YES_LDAS | 0.0039 | GT | 1.7232 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr9--chr12]"] |
| SH3GLB1--EEF2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SH3GLB1^ENSG00000097033.14 | chr1:86704647:+ | EEF2^ENSG00000167658.16 | chr19:3984350:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2318:7941:24148 | . | NO_LDAS | 0.0039 | GT | 1.5329 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr1--chr19]"] |
| SFXN4--SETDB1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SFXN4^ENSG00000183605.17 | chr10:119155169:- | SETDB1^ENSG00000143379.12 | chr1:150949197:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1210:40123:6605 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr10--chr1]"] |
| SF3B2--EME2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SF3B2^ENSG00000087365.16 | chr11:66068186:+ | EME2^ENSG00000197774.13 | chr16:1777337:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2114:45681:24499 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr11--chr16]"] |
| SETD3--PPP1R13B | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SETD3^ENSG00000183576.13 | chr14:99480728:- | PPP1R13B^ENSG00000088808.18 | chr14:103797518:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2241:44654:21878 | . | NO_LDAS | 0.0039 | GT | 1.3383 | AG | 1.6895 | ["INTRACHROMOSOMAL[chr14:4.25Mb]"] |
| SETD3--ECM2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SETD3^ENSG00000183576.13 | chr14:99458279:- | ECM2^ENSG00000106823.12 | chr9:92494030:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1173:20465:22327 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr14--chr9]"] |
| SERPINB9P1--ESYT1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SERPINB9P1^ENSG00000230438.7 | chr6:2876312:- | ESYT1^ENSG00000139641.13 | chr12:56128423:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1129:22382:5050 | . | NO_LDAS | 0.0039 | GT | 1.5656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr6--chr12]"] |
| SERINC2--ZSCAN9 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SERINC2^ENSG00000168528.12 | chr1:31429538:+ | ZSCAN9^ENSG00000137185.13 | chr6:28232562:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1243:8766:12098 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| SERINC2--SLFNL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SERINC2^ENSG00000168528.12 | chr1:31423743:+ | SLFNL1^ENSG00000171790.15 | chr1:41017341:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1181:11468:6689 | . | NO_LDAS | 0.0039 | GC | 1.7465 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr1:9.58Mb]"] |
| SEPTIN9--RPL37A | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | SEPTIN9^ENSG00000184640.20 | chr17:77498820:+ | RPL37A^ENSG00000197756.10 | chr2:216499348:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1138:26322:11313 | . | NO_LDAS | 0.0019 | GT | 1.6895 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr17--chr2]"] |
| SEPTIN14--AP006222.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SEPTIN14^ENSG00000154997.9 | chr7:55795924:- | AP006222.1^ENSG00000228463.10 | chr1:289370:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2156:3443:3074 | . | YES_LDAS | 0.0039 | GT | 1.5546 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr7--chr1]"] |
| SEPHS2--MARCKS | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SEPHS2^ENSG00000179918.19 | chr16:30444990:- | MARCKS^ENSG00000277443.3 | chr6:113860421:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1170:35706:1112 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.0530 | ["INTERCHROMOSOMAL[chr16--chr6]"] |
| SENP2--STAT5B | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | SENP2^ENSG00000163904.13 | chr3:185632829:+ | STAT5B^ENSG00000173757.10 | chr17:42217240:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1382:46498:25802 | . | NO_LDAS | 0.0019 | GT | 1.7232 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr3--chr17]"] |
| SELENOS--CPSF6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SELENOS^ENSG00000131871.15 | chr15:101277421:- | CPSF6^ENSG00000111605.18 | chr12:69239612:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2445:28231:18179 | . | NO_LDAS | 0.0039 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr15--chr12]"] |
| SEC22A--TTL | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SEC22A^ENSG00000121542.12 | chr3:123271904:+ | TTL^ENSG00000114999.8 | chr2:112483372:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1286:23280:9491 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr3--chr2]"] |
| SEC13--FKBP8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SEC13^ENSG00000157020.18 | chr3:10305139:- | FKBP8^ENSG00000105701.16 | chr19:18541850:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1149:49047:20939 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr3--chr19]"] |
| SDK2--ZNF429 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SDK2^ENSG00000069188.17 | chr17:73401020:- | ZNF429^ENSG00000197013.10 | chr19:21541764:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1145:42138:9982 | . | YES_LDAS | 0.0039 | GT | 1.7056 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr17--chr19]"] |
| SCUBE1--KCTD13 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SCUBE1^ENSG00000159307.19 | chr22:43197586:- | KCTD13^ENSG00000174943.11 | chr16:29923359:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1253:33012:10879 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr22--chr16]"] |
| SCGB3A1--CACNB3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SCGB3A1^ENSG00000161055.4 | chr5:180590231:- | CACNB3^ENSG00000167535.8 | chr12:48826330:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2169:40075:15349 | . | NO_LDAS | 0.0039 | GC | 1.9086 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr5--chr12]"] |
| SCFD2--BMP2K | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | SCFD2^ENSG00000184178.16 | chr4:53352598:- | BMP2K^ENSG00000138756.19 | chr4:78826037:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2144:50802:2345 | . | YES_LDAS | 0.0039 | GT | 1.8256 | AG | 1.9899 | ["INTRACHROMOSOMAL[chr4:25.41Mb]"] |
| SCAMP3--BCL7A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SCAMP3^ENSG00000116521.11 | chr1:155257285:- | BCL7A^ENSG00000110987.9 | chr12:122020425:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1101:9317:16414 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr1--chr12]"] |
| SAV1--WWP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | SAV1^ENSG00000151748.15 | chr14:50644932:- | WWP2^ENSG00000198373.13 | chr16:69929450:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:51061:4307 | . | NO_LDAS | 0.0039 | GT | 1.5656 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr14--chr16]"] |
| S1PR4--IFIT1P1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | S1PR4^ENSG00000125910.6 | chr19:3179047:+ | IFIT1P1^ENSG00000215515.2 | chr13:32384872:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2474:2383:15166 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr19--chr13]"] |
| RYK--NEB | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RYK^ENSG00000163785.13 | chr3:134222418:- | NEB^ENSG00000183091.20 | chr2:151527022:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1274:1024:22201 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr3--chr2]"] |
| RUNX1--SCAF4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RUNX1^ENSG00000159216.19 | chr21:34859474:- | SCAF4^ENSG00000156304.15 | chr21:31706357:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1324:18774:26432 | . | YES_LDAS | 0.0039 | GT | 1.7819 | AG | 1.6402 | ["INTRACHROMOSOMAL[chr21:3.06Mb]"] |
| RSRP1--TRIM16L | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | RSRP1^ENSG00000117616.18 | chr1:25246527:- | TRIM16L^ENSG00000108448.22 | chr17:18735119:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1476:10037:14746 | . | NO_LDAS | 0.0019 | GT | 1.9329 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| RS1--CC2D1A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RS1^ENSG00000102104.9 | chrX:18640436:- | CC2D1A^ENSG00000132024.18 | chr19:13912323:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2394:46353:22495 | . | NO_LDAS | 0.0039 | GT | 0.3534 | AG | 1.8256 | ["INTERCHROMOSOMAL[chrX--chr19]"] |
| RS1--ATP2A2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RS1^ENSG00000102104.9 | chrX:18640436:- | ATP2A2^ENSG00000174437.17 | chr12:110339529:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1164:29566:19678 | . | NO_LDAS | 0.0039 | GT | 0.3534 | AG | 1.9219 | ["INTERCHROMOSOMAL[chrX--chr12]"] |
| RPS6--RPS6P23 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPS6^ENSG00000137154.13 | chr9:19378368:- | RPS6P23^ENSG00000230871.1 | chr13:99174107:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2367:28385:5554 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr9--chr13]"] |
| RPS2P5--TNFSF9 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | RPS2P5^ENSG00000240342.3 | chr12:118246432:+ | TNFSF9^ENSG00000125657.5 | chr19:6534922:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2117:24890:21108 | . | NO_LDAS | 0.001 | GT | 1.8256 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr12--chr19]"] |
| RPS26--FAAP20 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPS26^ENSG00000197728.11 | chr12:56043493:+ | FAAP20^ENSG00000162585.17 | chr1:2192551:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1440:5263:2836 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr12--chr1]"] |
| RPS24P1--RPS24 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPS24P1^ENSG00000236477.1 | chrY:12245451:+ | RPS24^ENSG00000138326.21 | chr10:78040208:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2486:29331:11061 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9329 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chrY--chr10]"] |
| RPS23--RPS23P3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPS23^ENSG00000186468.13 | chr5:82276178:- | RPS23P3^ENSG00000244099.1 | chr4:66431301:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2488:39185:6465 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr5--chr4]"] |
| RPRD1B--TTI1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RPRD1B^ENSG00000101413.12 | chr20:38034098:+ | TTI1^ENSG00000101407.13 | chr20:38013857:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1260:19114:1827 | . | NO_LDAS | 0.0039 | GT | 1.8256 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr20:0.00Mb]","LOCAL_INVERSION:+:-:[264]"] |
| RPLP1--AC092639.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPLP1^ENSG00000137818.12 | chr15:69455287:+ | AC092639.1^ENSG00000248755.1 | chr4:171169521:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1462:26589:2527 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr15--chr4]"] |
| RPL8--ACSS3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL8^ENSG00000161016.18 | chr8:144791277:- | ACSS3^ENSG00000111058.8 | chr12:81255679:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1390:28344:12798 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.4256 | ["INTERCHROMOSOMAL[chr8--chr12]"] |
| RPL7AP30--RPL7AP51 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL7AP30^ENSG00000241741.1 | chr4:112788543:- | RPL7AP51^ENSG00000226448.1 | chr10:67334428:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1253:6388:15124 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr4--chr10]"] |
| RPL37A--XXYLT1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL37A^ENSG00000197756.10 | chr2:216500031:+ | XXYLT1^ENSG00000173950.16 | chr3:195069933:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1310:15570:8356 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr2--chr3]"] |
| RPL32P32--RPL32 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL32P32^ENSG00000241157.1 | chr17:60245407:- | RPL32^ENSG00000144713.13 | chr3:12836223:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1327:44589:18263 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr17--chr3]"] |
| RPL31P35--RPL31P63 | 1 | 0 | 0.12 | 0.00 | INCL_NON_REF_SPLICE | RPL31P35^ENSG00000232612.1 | chr7:54656475:+ | RPL31P63^ENSG00000236735.3 | chrX:68600219:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2169:47615:13863 | . | NO_LDAS | 0.0005 | GT | 1.9086 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr7--chrX]"] |
| RPL26P34--RPL26 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL26P34^ENSG00000225404.2 | chr13:24704716:- | RPL26^ENSG00000161970.15 | chr17:8382230:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1403:25828:28955 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr13--chr17]"] |
| RPL24--LINC00114 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL24^ENSG00000114391.13 | chr3:101685814:- | LINC00114^ENSG00000223806.8 | chr21:38739169:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2298:16929:12476 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr3--chr21]"] |
| RPL24--AL359764.3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL24^ENSG00000114391.13 | chr3:101685818:- | AL359764.3^ENSG00000287738.1 | chr1:241455495:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1247:21629:3438 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr3--chr1]"] |
| RPL13A--ZNF234 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL13A^ENSG00000142541.18 | chr19:49490295:+ | ZNF234^ENSG00000263002.8 | chr19:44159165:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1156:36127:29501 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.7968 | ["INTRACHROMOSOMAL[chr19:5.33Mb]"] |
| RPL13A--NPHP4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL13A^ENSG00000142541.18 | chr19:49490295:+ | NPHP4^ENSG00000131697.18 | chr1:5879491:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1236:48974:3354 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr19--chr1]"] |
| RPL12P27--RPL12P10 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL12P27^ENSG00000237169.1 | chr10:97309710:- | RPL12P10^ENSG00000226279.2 | chr7:22882143:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2234:31548:6829 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr10--chr7]"] |
| RPL10--TNC | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL10^ENSG00000147403.18 | chrX:154399396:+ | TNC^ENSG00000041982.16 | chr9:115026584:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1116:51651:25872 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.9656 | ["INTERCHROMOSOMAL[chrX--chr9]"] |
| RPL10--TBC1D9B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RPL10^ENSG00000147403.18 | chrX:154399594:+ | TBC1D9B^ENSG00000197226.13 | chr5:179867822:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1384:50228:1995 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.5628 | ["INTERCHROMOSOMAL[chrX--chr5]"] |
| RNF152--DCAF8 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RNF152^ENSG00000176641.11 | chr18:61892795:- | DCAF8^ENSG00000132716.19 | chr1:160218968:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1288:43610:28702 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr18--chr1]"] |
| RNF126--FBXL16 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RNF126^ENSG00000070423.18 | chr19:652233:- | FBXL16^ENSG00000127585.12 | chr16:695461:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2375:12795:23223 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr19--chr16]"] |
| RN7SL753P--TRIOBP | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | RN7SL753P^ENSG00000264275.1 | chr2:202333613:+ | TRIOBP^ENSG00000100106.22 | chr22:37746312:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1335:50511:27595 | . | NO_LDAS | 0.001 | GT | 1.9656 | AG | 0.8366 | ["INTERCHROMOSOMAL[chr2--chr22]"] |
| RN7SL630P--RN7SL617P | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | RN7SL630P^ENSG00000264978.2 | chr12:93831228:+ | RN7SL617P^ENSG00000241162.3 | chr6:110440150:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1355:34913:24961 | . | YES_LDAS | 0.0013 | GT | 1.8323 | AG | 1.9329 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr12--chr6]"] |
| RN7SL630P--RN7SL452P | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RN7SL630P^ENSG00000264978.2 | chr12:93831228:+ | RN7SL452P^ENSG00000243103.3 | chr14:50637835:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1372:11833:29319 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9086 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr12--chr14]"] |
| RN7SL630P--RN7SL277P | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | RN7SL630P^ENSG00000264978.2 | chr12:93831228:+ | RN7SL277P^ENSG00000240490.3 | chr1:19424537:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1355:34913:24961 | . | YES_LDAS | 0.0013 | GT | 1.8323 | AG | 1.9329 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr12--chr1]"] |
| RN7SL47P--RN7SL296P | 1 | 0 | 0.11 | 0.00 | INCL_NON_REF_SPLICE | RN7SL47P^ENSG00000244710.3 | chr6:106283481:- | RN7SL296P^ENSG00000275090.1 | chr3:33103058:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1173:2027:8160 | . | NO_LDAS | 0.0004 | GT | 1.9086 | AG | 1.8892 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr6--chr3]"] |
| RN7SL361P--PDE6A | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | RN7SL361P^ENSG00000242158.3 | chr2:60640792:+ | PDE6A^ENSG00000132915.11 | chr5:149867234:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2264:4293:17296 | . | NO_LDAS | 0.0004 | GT | 1.7968 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr2--chr5]"] |
| RN7SL263P--RN7SL127P | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | RN7SL263P^ENSG00000240160.3 | chr22:23261801:- | RN7SL127P^ENSG00000242175.3 | chr4:78899004:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1426:40059:11089 | . | NO_LDAS | 0.0019 | GT | 1.8892 | AG | 1.5656 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr22--chr4]"] |
| RN7SL221P--PDE6A | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | RN7SL221P^ENSG00000239472.3 | chr6:5918768:- | PDE6A^ENSG00000132915.11 | chr5:149867234:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2264:4293:17296 | . | NO_LDAS | 0.0004 | GT | 1.7056 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr6--chr5]"] |
| RN7SKP292--RN7SKP80 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | RN7SKP292^ENSG00000202392.1 | chr4:6997194:+ | RN7SKP80^ENSG00000202058.1 | chr22:42565143:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1111:32219:21556 | . | YES_LDAS | 0.0013 | GT | 1.9329 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr4--chr22]"] |
| RN7SKP292--PLCG2 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | RN7SKP292^ENSG00000202392.1 | chr4:6997194:+ | PLCG2^ENSG00000197943.10 | chr16:81962114:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1111:32219:21556 | . | YES_LDAS | 0.0013 | GT | 1.9329 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr4--chr16]"] |
| RIT1--RIT2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RIT1^ENSG00000143622.11 | chr1:155904311:- | RIT2^ENSG00000152214.14 | chr18:42974147:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1152:4090:24457 | . | NO_LDAS | 0.0039 | GT | 1.6729 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr1--chr18]"] |
| RIN3--RCOR1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RIN3^ENSG00000100599.16 | chr14:92513976:+ | RCOR1^ENSG00000089902.10 | chr14:102681895:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1164:37065:3270 | . | YES_LDAS | 0.0039 | GT | 1.4295 | AG | 1.7819 | ["INTRACHROMOSOMAL[chr14:9.90Mb]"] |
| RIMKLBP1--TCF12 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RIMKLBP1^ENSG00000189089.5 | chr21:36050345:+ | TCF12^ENSG00000140262.18 | chr15:56921026:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1481:30294:19118 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr21--chr15]"] |
| RHOBTB3--PCCB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RHOBTB3^ENSG00000164292.13 | chr5:95780425:+ | PCCB^ENSG00000114054.14 | chr3:136334606:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2281:19607:26278 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr5--chr3]"] |
| RFX1--EPHA2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RFX1^ENSG00000132005.9 | chr19:14006103:- | EPHA2^ENSG00000142627.13 | chr1:16125320:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1132:2845:7390 | . | YES_LDAS | 0.0039 | GT | 1.4716 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr19--chr1]"] |
| RFX1--AP000721.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RFX1^ENSG00000132005.9 | chr19:13993525:- | AP000721.2^ENSG00000256824.1 | chr11:64103581:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1153:45794:26208 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 0.9056 | ["INTERCHROMOSOMAL[chr19--chr11]"] |
| RETREG1--GOLPH3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RETREG1^ENSG00000154153.14 | chr5:16565763:- | GOLPH3^ENSG00000113384.14 | chr5:32126636:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1492:47089:22733 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9086 | ["INTRACHROMOSOMAL[chr5:15.51Mb]"] |
| REPS1--AC135895.1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | REPS1^ENSG00000135597.19 | chr6:138987530:- | AC135895.1^ENSG00000198671.3 | chr12:65019347:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1217:7601:20449 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr6--chr12]"] |
| RELA--POLR3D | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | RELA^ENSG00000173039.19 | chr11:65658718:- | POLR3D^ENSG00000168495.13 | chr8:22248617:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1243:42866:14522 | . | NO_LDAS | 0.0019 | GT | 1.6895 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr11--chr8]"] |
| RELA--CISH | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | RELA^ENSG00000173039.19 | chr11:65658718:- | CISH^ENSG00000114737.16 | chr3:50610698:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1243:42866:14522 | . | NO_LDAS | 0.0019 | GT | 1.6895 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr11--chr3]"] |
| RCC2P3--MGMT | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RCC2P3^ENSG00000233951.3 | chr7:138122294:+ | MGMT^ENSG00000170430.10 | chr10:129707912:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1410:1615:3802 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr7--chr10]"] |
| RBPMSLP--SLC35F3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RBPMSLP^ENSG00000234159.1 | chr21:15744882:- | SLC35F3^ENSG00000183780.13 | chr1:233905012:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1455:32130:19020 | . | NO_LDAS | 0.0039 | GT | 1.3996 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr21--chr1]"] |
| RBM14--RBM4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | RBM4^ENSG00000173933.21 | chr11:66646027:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2170:49419:2780 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.2310 | ["HGNC_GENEFAM","Greger_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[8733]"] |
| RBM10--TAOK2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RBM10^ENSG00000182872.16 | chrX:47186144:+ | TAOK2^ENSG00000149930.18 | chr16:29983051:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1195:13256:10262 | . | NO_LDAS | 0.0039 | GT | 1.5219 | AG | 1.8295 | ["INTERCHROMOSOMAL[chrX--chr16]"] |
| RBCK1--FKBP4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RBCK1^ENSG00000125826.21 | chr20:422238:+ | FKBP4^ENSG00000004478.8 | chr12:2803151:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1244:49047:11663 | . | YES_LDAS | 0.0039 | GT | 1.6895 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr20--chr12]"] |
| RASAL1--CIB1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RASAL1^ENSG00000111344.11 | chr12:113112086:- | CIB1^ENSG00000185043.12 | chr15:90233703:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1131:37195:9211 | . | NO_LDAS | 0.0039 | GT | 1.5656 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr12--chr15]"] |
| RASA4DP--CHMP7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RASA4DP^ENSG00000233297.4 | chr7:102690064:- | CHMP7^ENSG00000147457.14 | chr8:23246780:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2236:51441:28338 | . | NO_LDAS | 0.0039 | GC | 1.7465 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr7--chr8]"] |
| RASA4--POLR2J | 1 | 0 | 0.11 | 0.00 | ONLY_REF_SPLICE | RASA4^ENSG00000105808.18 | chr7:102583004:- | POLR2J^ENSG00000005075.15 | chr7:102476270:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1265:19227:12896 | . | YES_LDAS | 0.0004 | GT | 1.8256 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr7:0.09Mb]","NEIGHBORS[94900]"] |
| RANBP2--IFT140 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RANBP2^ENSG00000153201.16 | chr2:108719678:+ | IFT140^ENSG00000187535.14 | chr16:1524063:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2309:38813:3270 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr2--chr16]"] |
| RANBP17--PGBD2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RANBP17^ENSG00000204764.14 | chr5:170968377:+ | PGBD2^ENSG00000185220.12 | chr1:248917279:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1179:40034:26124 | . | YES_LDAS | 0.0039 | GT | 1.6402 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr5--chr1]"] |
| RALGAPB--ADCY7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RALGAPB^ENSG00000170471.15 | chr20:38562616:+ | ADCY7^ENSG00000121281.13 | chr16:50279578:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2365:34962:23083 | . | NO_LDAS | 0.0039 | GC | 1.7465 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr20--chr16]"] |
| RACGAP1--ZMYM2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RACGAP1^ENSG00000161800.13 | chr12:50016649:- | ZMYM2^ENSG00000121741.17 | chr13:19993063:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1413:45908:21668 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr12--chr13]"] |
| RABGGTB--KCTD3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RABGGTB^ENSG00000137955.16 | chr1:75794990:+ | KCTD3^ENSG00000136636.13 | chr1:215595356:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2107:30512:14284 | . | NO_LDAS | 0.0039 | GT | 1.5656 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr1:139.77Mb]"] |
| RAB30--KREMEN1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | RAB30^ENSG00000137502.10 | chr11:83060077:- | KREMEN1^ENSG00000183762.13 | chr22:29137342:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1466:7205:19146 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr11--chr22]"] |
| RAB2A--AC026412.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RAB2A^ENSG00000104388.15 | chr8:60517253:+ | AC026412.1^ENSG00000188002.10 | chr5:1602036:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1111:17811:5736 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr8--chr5]"] |
| RAB11FIP1--GPX4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | RAB11FIP1^ENSG00000156675.16 | chr8:37862130:- | GPX4^ENSG00000167468.18 | chr19:1106242:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1250:44913:10640 | . | NO_LDAS | 0.0039 | GC | 1.7819 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr8--chr19]"] |
| PTTG1IP--PER1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PTTG1IP^ENSG00000183255.12 | chr21:44851544:- | PER1^ENSG00000179094.16 | chr17:8140878:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2211:46741:8567 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr21--chr17]"] |
| PTPRN2-AS1--RBM38 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PTPRN2-AS1^ENSG00000233038.6 | chr7:157856063:+ | RBM38^ENSG00000132819.17 | chr20:57393279:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2471:5417:17394 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr7--chr20]"] |
| PTPRM--ARHGEF34P | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | PTPRM^ENSG00000173482.17 | chr18:8387221:+ | ARHGEF34P^ENSG00000204959.4 | chr7:144286031:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2267:1874:18179 | . | NO_LDAS | 0.0013 | GT | 1.4566 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr18--chr7]"] |
| PTMA--LRP8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PTMA^ENSG00000187514.17 | chr2:231711425:+ | LRP8^ENSG00000157193.18 | chr1:53273658:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2249:13410:10612 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr2--chr1]"] |
| PTK2--SUMF2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PTK2^ENSG00000169398.19 | chr8:140674298:- | SUMF2^ENSG00000129103.19 | chr7:56079702:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1160:5102:16259 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr8--chr7]"] |
| PTK2--FGFR1OP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PTK2^ENSG00000169398.19 | chr8:140789474:- | FGFR1OP2^ENSG00000111790.14 | chr12:26961949:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2343:43303:15643 | . | NO_LDAS | 0.0039 | GT | 1.8256 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr8--chr12]"] |
| PSMD7--LSM8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PSMD7^ENSG00000103035.11 | chr16:74304596:+ | LSM8^ENSG00000128534.8 | chr7:118185654:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1106:28789:24106 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr16--chr7]"] |
| PSKH1--NYAP1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | PSKH1^ENSG00000159792.10 | chr16:67909039:+ | NYAP1^ENSG00000166924.9 | chr7:100494404:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2230:10522:24667 | . | NO_LDAS | 0.0013 | GT | 1.9656 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr16--chr7]"] |
| PRUNE2--KIDINS220 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PRUNE2^ENSG00000106772.18 | chr9:76846515:- | KIDINS220^ENSG00000134313.16 | chr2:8751644:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1185:38950:21332 | . | YES_LDAS | 0.0039 | GT | 1.9219 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr9--chr2]"] |
| PRPF8--OSBP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PRPF8^ENSG00000174231.17 | chr17:1651414:- | OSBP2^ENSG00000184792.16 | chr22:30881700:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1109:20189:28800 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.4295 | ["INTERCHROMOSOMAL[chr17--chr22]"] |
| PRKAR1B--UVSSA | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PRKAR1B^ENSG00000188191.15 | chr7:680595:- | UVSSA^ENSG00000163945.19 | chr4:1346252:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2258:36515:4895 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr7--chr4]"] |
| PRKAG2--RHEB | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PRKAG2^ENSG00000106617.15 | chr7:151632069:- | RHEB^ENSG00000106615.10 | chr7:151491014:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1395:37348:17436 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr7:0.04Mb]","NEIGHBORS[36004]"] |
| PREP--RBM33 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PREP^ENSG00000085377.15 | chr6:105277512:- | RBM33^ENSG00000184863.11 | chr7:155700773:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2336:12407:5596 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr6--chr7]"] |
| PPP3CB--MSS51 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PPP3CB^ENSG00000107758.16 | chr10:73444725:- | MSS51^ENSG00000166343.10 | chr10:73428301:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1125:31847:3957 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr10:0.00Mb]","NEIGHBORS[2872]"] |
| PPP3CA--GRK2 | 1 | 0 | 0.08 | 0.00 | INCL_NON_REF_SPLICE | PPP3CA^ENSG00000138814.17 | chr4:101347529:- | GRK2^ENSG00000173020.11 | chr11:67266653:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1293:5344:19847 | . | YES_LDAS | 0.0003 | GT | 1.0530 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr4--chr11]"] |
| PPP2R5C--SUSD6 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PPP2R5C^ENSG00000078304.19 | chr14:101810036:+ | SUSD6^ENSG00000100647.8 | chr14:69703395:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1158:51304:15012 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7232 | ["INTRACHROMOSOMAL[chr14:32.05Mb]"] |
| PPP1R3C--RTF1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PPP1R3C^ENSG00000119938.9 | chr10:91632956:- | RTF1^ENSG00000137815.14 | chr15:41438321:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1226:50478:29249 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr10--chr15]"] |
| PPP1R1A--DNAH9 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PPP1R1A^ENSG00000135447.17 | chr12:54588518:- | DNAH9^ENSG00000007174.18 | chr17:11769259:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1152:33506:9127 | . | NO_LDAS | 0.0039 | GC | 1.5546 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr12--chr17]"] |
| PPP1R12C--SLCO1A2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PPP1R12C^ENSG00000125503.13 | chr19:55091650:- | SLCO1A2^ENSG00000084453.16 | chr12:21274960:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1364:42752:11944 | . | NO_LDAS | 0.0039 | GT | 1.5329 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr19--chr12]"] |
| PPFIA1--ITPR2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PPFIA1^ENSG00000131626.19 | chr11:70324926:+ | ITPR2^ENSG00000123104.12 | chr12:26602706:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1292:44411:18431 | . | NO_LDAS | 0.0039 | GT | 1.5058 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr11--chr12]"] |
| POLR3A--AC090515.4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | POLR3A^ENSG00000148606.13 | chr10:78026169:- | AC090515.4^ENSG00000259353.1 | chr15:58865023:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2467:51409:27721 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr10--chr15]"] |
| POLR2J2--AC004951.2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | POLR2J2^ENSG00000228049.7 | chr7:102666077:- | AC004951.2^ENSG00000239556.4 | chr7:43988247:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2172:18806:9590 | . | NO_LDAS | 0.0019 | GT | 1.9086 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr7:58.68Mb]"] |
| POLR2F--GLI3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | POLR2F^ENSG00000100142.16 | chr22:37986312:+ | GLI3^ENSG00000106571.15 | chr7:42223295:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1106:48100:3634 | . | YES_LDAS | 0.0039 | GT | 1.5329 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr22--chr7]"] |
| PNPLA6--PPP2R5C | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PNPLA6^ENSG00000032444.17 | chr19:7550587:+ | PPP2R5C^ENSG00000078304.19 | chr14:101823683:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1265:43998:7067 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr19--chr14]"] |
| PNN--PHC2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PNN^ENSG00000100941.9 | chr14:39181474:+ | PHC2^ENSG00000134686.18 | chr1:33375468:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2461:29550:17633 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr14--chr1]"] |
| PNLIPRP2--AL162231.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PNLIPRP2^ENSG00000266200.6 | chr10:116645142:+ | AL162231.1^ENSG00000187186.15 | chr9:34665139:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1268:34080:25395 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr10--chr9]"] |
| PNISR--GAB2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PNISR^ENSG00000132424.17 | chr6:99402692:- | GAB2^ENSG00000033327.13 | chr11:78221709:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2356:27454:8398 | . | NO_LDAS | 0.0039 | AT | 1.6895 | AC | 1.7819 | ["INTERCHROMOSOMAL[chr6--chr11]"] |
| PMS2P11--BAZ1B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PMS2P11^ENSG00000241350.1 | chr7:77015855:+ | BAZ1B^ENSG00000009954.11 | chr7:73470483:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1246:10894:14858 | . | YES_LDAS | 0.0039 | GT | 1.4566 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr7:3.49Mb]"] |
| PMS2CL--UPK3BL1 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | PMS2CL^ENSG00000187953.10 | chr7:6711469:+ | UPK3BL1^ENSG00000267368.1 | chr7:102640773:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1191:47687:12896 | . | NO_LDAS | 0.0019 | GT | 1.9329 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr7:95.88Mb]"] |
| PMS1--ADAMTS3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PMS1^ENSG00000064933.18 | chr2:189854793:+ | ADAMTS3^ENSG00000156140.10 | chr4:72283428:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1415:1283:10234 | . | NO_LDAS | 0.0039 | GT | 1.3996 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr4]"] |
| PLTP--AL162588.1 | 1 | 0 | 0.17 | 0.00 | ONLY_REF_SPLICE | PLTP^ENSG00000100979.15 | chr20:45902267:- | AL162588.1^ENSG00000285115.1 | chr9:113060507:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2353:7925:17394 | . | NO_LDAS | 0.0007 | GT | 1.8323 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr20--chr9]"] |
| PLEKHO2--ANKDD1A | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PLEKHO2^ENSG00000241839.10 | chr15:64855037:+ | ANKDD1A^ENSG00000166839.17 | chr15:64926066:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1280:40067:12140 | . | YES_LDAS | 0.0039 | GT | 1.8256 | AG | 1.9899 | ["Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr15:0.04Mb]","NEIGHBORS[43900]"] |
| PLEKHH1--AC012301.2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PLEKHH1^ENSG00000054690.14 | chr14:67586097:+ | AC012301.2^ENSG00000286777.1 | chr18:57047116:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2335:48181:5624 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr14--chr18]"] |
| PLEKHG3--DEPTOR | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PLEKHG3^ENSG00000126822.17 | chr14:64737375:+ | DEPTOR^ENSG00000155792.10 | chr8:120049576:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1432:50495:3102 | . | NO_LDAS | 0.0039 | GT | 1.7056 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr14--chr8]"] |
| PLEKHA7--5_8S_rRNA | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | PLEKHA7^ENSG00000166689.16 | chr11:16801044:- | 5_8S_rRNA^ENSG00000276871.1 | chr22:11249907:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2339:21128:12266 | . | YES_LDAS | 0.0004 | GT | 1.8295 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr11--chr20]"] |
| PLEKHA7--5_8S_rRNA | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | PLEKHA7^ENSG00000166689.16 | chr11:16801044:- | 5_8S_rRNA^ENSG00000277739.1 | chr21:8256833:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2339:21128:12266 | . | YES_LDAS | 0.0004 | GT | 1.8295 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr11--chr20]"] |
| PLEKHA7--5_8S_rRNA | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | PLEKHA7^ENSG00000166689.16 | chr11:16801044:- | 5_8S_rRNA^ENSG00000275877.1 | chr20:30485024:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2339:21128:12266 | . | YES_LDAS | 0.0004 | GT | 1.8295 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr11--chr20]"] |
| PLEKHA7--5_8S_rRNA | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | PLEKHA7^ENSG00000166689.16 | chr11:16801044:- | 5_8S_rRNA^ENSG00000283568.1 | chr20:29297194:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2339:21128:12266 | . | YES_LDAS | 0.0004 | GT | 1.8295 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr11--chr20]"] |
| PLEKHA7--5_8S_rRNA | 1 | 0 | 0.10 | 0.00 | INCL_NON_REF_SPLICE | PLEKHA7^ENSG00000166689.16 | chr11:16801044:- | 5_8S_rRNA^ENSG00000283274.1 | chr14:16057524:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2339:21128:12266 | . | YES_LDAS | 0.0004 | GT | 1.8295 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr11--chr20]"] |
| PLD3--C16orf46 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PLD3^ENSG00000105223.20 | chr19:40366510:+ | C16orf46^ENSG00000166455.14 | chr16:81062065:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2240:28498:28926 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr19--chr16]"] |
| PLCB1--TRIB1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PLCB1^ENSG00000182621.18 | chr20:8150371:+ | TRIB1^ENSG00000173334.4 | chr8:125436006:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2181:30739:9435 | . | NO_LDAS | 0.0039 | GT | 1.5546 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr20--chr8]"] |
| PKD1--JPH4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PKD1^ENSG00000008710.20 | chr16:2111804:- | JPH4^ENSG00000092051.17 | chr14:23575980:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1130:37122:19258 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr16--chr14]"] |
| PINLYP--AP001972.3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PINLYP^ENSG00000234465.11 | chr19:43576110:+ | AP001972.3^ENSG00000255136.3 | chr11:75241141:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1292:47833:29319 | . | NO_LDAS | 0.0039 | GT | 1.4256 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr19--chr11]"] |
| PINCR--PIEZO1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PINCR^ENSG00000224294.1 | chrX:43226115:+ | PIEZO1^ENSG00000103335.22 | chr16:88722066:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1248:45026:24148 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.6402 | ["INTERCHROMOSOMAL[chrX--chr16]"] |
| PIM3--PRDX1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PIM3^ENSG00000198355.5 | chr22:49963043:+ | PRDX1^ENSG00000117450.15 | chr1:45521903:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2262:4592:18459 | . | NO_LDAS | 0.0019 | GT | 1.3753 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr22--chr1]"] |
| PIM3--CD151 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PIM3^ENSG00000198355.5 | chr22:49962713:+ | CD151^ENSG00000177697.19 | chr11:837508:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1326:8281:26614 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr22--chr11]"] |
| PIK3R1--PIK3R2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PIK3R1^ENSG00000145675.15 | chr5:68281006:+ | PIK3R2^ENSG00000105647.19 | chr19:18162202:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1347:38958:12490 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.8295 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr5--chr19]"] |
| PIGO--CAMTA2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PIGO^ENSG00000165282.14 | chr9:35091696:- | CAMTA2^ENSG00000108509.21 | chr17:4972526:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2264:22074:20855 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.3383 | ["INTERCHROMOSOMAL[chr9--chr17]"] |
| PIEZO1--ASPSCR1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PIEZO1^ENSG00000103335.22 | chr16:88723095:- | ASPSCR1^ENSG00000169696.16 | chr17:81996790:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2310:34120:20141 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.5058 | ["INTERCHROMOSOMAL[chr16--chr17]"] |
| PI4KB--ZSCAN29 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PI4KB^ENSG00000143393.16 | chr1:151327405:- | ZSCAN29^ENSG00000140265.12 | chr15:43371007:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2361:33133:13023 | . | NO_LDAS | 0.0039 | GT | 1.5628 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr1--chr15]"] |
| PHB--MTRNR2L6 | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | PHB^ENSG00000167085.13 | chr17:49404858:- | MTRNR2L6^ENSG00000270672.1 | chr7:142667191:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2224:50033:19230 | . | NO_LDAS | 0.0003 | GT | 1.3996 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr17--chr7]"] |
| PHB--MTRNR2L4 | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | PHB^ENSG00000167085.13 | chr17:49404858:- | MTRNR2L4^ENSG00000232196.4 | chr16:3371942:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2224:50033:19230 | . | NO_LDAS | 0.0003 | GT | 1.3996 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr17--chr16]"] |
| PHB--MTRNR2L11 | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | PHB^ENSG00000167085.13 | chr17:49404858:- | MTRNR2L11^ENSG00000270188.1 | chr1:237944366:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2224:50033:19230 | . | NO_LDAS | 0.0003 | GT | 1.3996 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr17--chr1]"] |
| PHB--MTRNR2L10 | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | PHB^ENSG00000167085.13 | chr17:49404858:- | MTRNR2L10^ENSG00000256045.3 | chrX:55182034:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2224:50033:19230 | . | NO_LDAS | 0.0003 | GT | 1.3996 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr17--chrX]"] |
| PHB--AC025627.3 | 1 | 0 | 0.09 | 0.00 | INCL_NON_REF_SPLICE | PHB^ENSG00000167085.13 | chr17:49404858:- | AC025627.3^ENSG00000266179.2 | chr17:19600888:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2224:50033:19230 | . | NO_LDAS | 0.0003 | GT | 1.3996 | AG | 1.9086 | ["INTRACHROMOSOMAL[chr17:29.80Mb]"] |
| PGAM1P5--WRN | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PGAM1P5^ENSG00000257150.3 | chr12:95671141:+ | WRN^ENSG00000165392.11 | chr8:31064289:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1370:4673:13611 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr12--chr8]"] |
| PER2--PER1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PER2^ENSG00000132326.12 | chr2:238258497:- | PER1^ENSG00000179094.16 | chr17:8146502:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1366:27980:2948 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr2--chr17]"] |
| PDZRN3--SUMF1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PDZRN3^ENSG00000121440.15 | chr3:73602354:- | SUMF1^ENSG00000144455.14 | chr3:4418132:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1215:7666:12574 | . | YES_LDAS | 0.0039 | GT | 1.8256 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr3:68.92Mb]"] |
| PDXDC1--RIPK1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PDXDC1^ENSG00000179889.19 | chr16:15001856:+ | RIPK1^ENSG00000137275.16 | chr6:3106798:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1269:10231:14466 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr16--chr6]"] |
| PDXDC1--NPIPB14P | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | PDXDC1^ENSG00000179889.19 | chr16:15030056:+ | NPIPB14P^ENSG00000226232.8 | chr16:69982757:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1118:20400:6269 | . | YES_LDAS | 0.0019 | GT | 1.9329 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr16:54.84Mb]"] |
| PDLIM1--PVT1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PDLIM1^ENSG00000107438.9 | chr10:95268778:- | PVT1^ENSG00000249859.12 | chr8:127943147:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1406:1866:6367 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr10--chr8]"] |
| PDK2--TLN1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PDK2^ENSG00000005882.12 | chr17:50109400:+ | TLN1^ENSG00000137076.21 | chr9:35711313:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1479:28304:12112 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr17--chr9]"] |
| PDE8B--SNED1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PDE8B^ENSG00000113231.14 | chr5:77211154:+ | SNED1^ENSG00000162804.14 | chr2:241049897:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2306:48254:28983 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.5219 | ["INTERCHROMOSOMAL[chr5--chr2]"] |
| PDE5A--AC110079.1 | 1 | 0 | 0.08 | 0.00 | INCL_NON_REF_SPLICE | PDE5A^ENSG00000138735.16 | chr4:119498563:- | AC110079.1^ENSG00000260404.3 | chr4:118597094:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2253:38165:23532 | . | NO_LDAS | 0.0003 | GT | 1.8062 | AG | 1.7968 | ["INTRACHROMOSOMAL[chr4:0.86Mb]"] |
| PDE4DIP--MAGI2-AS3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PDE4DIP^ENSG00000178104.19 | chr1:148960785:+ | MAGI2-AS3^ENSG00000234456.8 | chr7:79462177:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1152:24752:23252 | . | NO_LDAS | 0.0019 | GT | 1.5656 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr1--chr7]"] |
| PDE3B--GPT2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PDE3B^ENSG00000152270.9 | chr11:14645053:+ | GPT2^ENSG00000166123.14 | chr16:46922242:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1239:37009:23041 | . | YES_LDAS | 0.0039 | GT | 1.9219 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr11--chr16]"] |
| PDE3B--CASP4LP | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PDE3B^ENSG00000152270.9 | chr11:14861370:+ | CASP4LP^ENSG00000235505.7 | chr11:104908897:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2409:2197:2906 | . | NO_LDAS | 0.0019 | GT | 1.8256 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr11:90.03Mb]"] |
| PDE3B--ANP32E | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PDE3B^ENSG00000152270.9 | chr11:14861370:+ | ANP32E^ENSG00000143401.15 | chr1:150235780:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2409:2197:2906 | . | NO_LDAS | 0.0019 | GT | 1.8256 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr11--chr1]"] |
| PCNX3--OAS2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PCNX3^ENSG00000197136.4 | chr11:65636689:+ | OAS2^ENSG00000111335.14 | chr12:112978504:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2306:13637:29053 | . | NO_LDAS | 0.0019 | GT | 1.6895 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr11--chr12]"] |
| PCMTD1--RB1CC1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PCMTD1^ENSG00000168300.14 | chr8:51845661:- | RB1CC1^ENSG00000023287.13 | chr8:52645867:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1281:49411:6157 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.8323 | ["TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr8:0.72Mb]"] |
| PCGF3--S100A1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PCGF3^ENSG00000185619.18 | chr4:705935:+ | S100A1^ENSG00000160678.12 | chr1:153630509:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1145:32761:4363 | . | YES_LDAS | 0.0039 | GT | 1.2729 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr4--chr1]"] |
| PCDH17--AKT2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PCDH17^ENSG00000118946.12 | chr13:57635111:+ | AKT2^ENSG00000105221.18 | chr19:40265351:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1275:49807:12924 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr13--chr19]"] |
| PCBP1-AS1--CNTNAP3 | 1 | 0 | 0.33 | 0.00 | ONLY_REF_SPLICE | PCBP1-AS1^ENSG00000179818.14 | chr2:70018015:- | CNTNAP3^ENSG00000106714.17 | chr9:39171630:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1404:34574:22803 | . | YES_LDAS | 0.0013 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr2--chr9]"] |
| PC--PKN1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PC^ENSG00000173599.15 | chr11:66849611:- | PKN1^ENSG00000123143.13 | chr19:14441224:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1323:40471:11131 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr11--chr19]"] |
| PBXIP1--CTCF | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | PBXIP1^ENSG00000163346.17 | chr1:154956069:- | CTCF^ENSG00000102974.16 | chr16:67610824:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2250:39856:22845 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr1--chr16]"] |
| PAXX--NKX2-1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | PAXX^ENSG00000148362.11 | chr9:136993411:+ | NKX2-1^ENSG00000136352.19 | chr14:36520605:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1158:8669:23980 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr9--chr14]"] |
| PAX9--PRKAG2 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | PAX9^ENSG00000198807.13 | chr14:36662093:+ | PRKAG2^ENSG00000106617.15 | chr7:151753054:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1233:9511:5680 | . | NO_LDAS | 0.001 | GT | 1.9219 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr14--chr7]"] |
| PAX9--ERC1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | PAX9^ENSG00000198807.13 | chr14:36662093:+ | ERC1^ENSG00000082805.20 | chr12:1257148:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1233:9511:5680 | . | NO_LDAS | 0.001 | GT | 1.9219 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr14--chr12]"] |
| PAX9--CLPB | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | PAX9^ENSG00000198807.13 | chr14:36662093:+ | CLPB^ENSG00000162129.14 | chr11:72288925:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1233:9511:5680 | . | NO_LDAS | 0.001 | GT | 1.9219 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr14--chr11]"] |
| PAX9--CHL1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | PAX9^ENSG00000198807.13 | chr14:36662093:+ | CHL1^ENSG00000134121.10 | chr3:196792:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1233:9511:5680 | . | NO_LDAS | 0.001 | GT | 1.9219 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr14--chr3]"] |
| PARD3--NPIPB3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | PARD3^ENSG00000148498.16 | chr10:34450317:- | NPIPB3^ENSG00000169246.16 | chr16:21431567:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2414:16347:8945 | . | YES_LDAS | 0.0019 | GT | 1.3383 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr10--chr16]"] |
| OXSM--CRYAB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | OXSM^ENSG00000151093.8 | chr3:25783228:+ | CRYAB^ENSG00000109846.9 | chr11:111908838:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2470:9260:25816 | . | NO_LDAS | 0.0039 | GT | 1.2419 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr3--chr11]"] |
| OTULIN--EPS8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | OTULIN^ENSG00000154124.5 | chr5:14693094:+ | EPS8^ENSG00000151491.14 | chr12:15682972:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2135:31750:4629 | . | YES_LDAS | 0.0039 | GT | 1.7819 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr5--chr12]"] |
| OR51S1--TP53I11 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | OR51S1^ENSG00000176922.4 | chr11:4848669:- | TP53I11^ENSG00000175274.19 | chr11:44933050:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1483:39889:14270 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.4256 | ["INTRACHROMOSOMAL[chr11:40.04Mb]"] |
| OR2C3--SLFN13 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | OR2C3^ENSG00000196242.10 | chr1:247527410:- | SLFN13^ENSG00000154760.14 | chr17:35440792:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2401:32122:17184 | . | NO_LDAS | 0.0039 | GT | 1.5329 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| OPN3--CLEC4A | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | OPN3^ENSG00000054277.14 | chr1:241614043:- | CLEC4A^ENSG00000111729.15 | chr12:8125561:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1107:49847:26306 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr1--chr12]"] |
| OPHN1--DMD | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | OPHN1^ENSG00000079482.14 | chrX:68432867:- | DMD^ENSG00000198947.17 | chrX:31134194:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1290:47081:10304 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9329 | ["INTRACHROMOSOMAL[chrX:34.61Mb]"] |
| OFD1--TXLNG | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | OFD1^ENSG00000046651.15 | chrX:13761211:+ | TXLNG^ENSG00000086712.13 | chrX:16818574:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1111:30820:24877 | . | YES_LDAS | 0.0039 | GT | 1.5329 | AG | 1.9086 | ["INTRACHROMOSOMAL[chrX:3.02Mb]"] |
| OAS2--FAT4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | OAS2^ENSG00000111335.14 | chr12:112987308:+ | FAT4^ENSG00000196159.14 | chr4:125408681:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2147:36442:6507 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr12--chr4]"] |
| NXPH1--QTRT1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NXPH1^ENSG00000122584.13 | chr7:8433956:+ | QTRT1^ENSG00000213339.9 | chr19:10712953:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2278:31119:3676 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr7--chr19]"] |
| NUP160--LATS2 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | NUP160^ENSG00000030066.13 | chr11:47803509:- | LATS2^ENSG00000150457.9 | chr13:20983557:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1359:16929:15811 | . | NO_LDAS | 0.001 | GT | 1.9086 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr11--chr13]"] |
| NUP153--CD2AP | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NUP153^ENSG00000124789.12 | chr6:17706277:- | CD2AP^ENSG00000198087.7 | chr6:47503280:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1315:41725:5932 | . | YES_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr6:29.77Mb]"] |
| NTHL1--AC022382.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NTHL1^ENSG00000065057.9 | chr16:2047709:- | AC022382.2^ENSG00000287878.1 | chr3:9695171:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1373:24696:2667 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.4295 | ["INTERCHROMOSOMAL[chr16--chr3]"] |
| NSUN5P1--AHSA2P | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NSUN5P1^ENSG00000223705.9 | chr7:75410726:+ | AHSA2P^ENSG00000173209.23 | chr2:61178981:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2385:31426:27497 | . | YES_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr7--chr2]"] |
| NSFL1C--ZDHHC4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NSFL1C^ENSG00000088833.18 | chr20:1455107:- | ZDHHC4^ENSG00000136247.15 | chr7:6578675:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1232:15950:11902 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr20--chr7]"] |
| NRSN2-AS1--C20orf96 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NRSN2-AS1^ENSG00000225377.6 | chr20:348100:- | C20orf96^ENSG00000196476.12 | chr20:289676:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1155:50656:11733 | . | YES_LDAS | 0.0039 | GT | 1.9899 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr20:0.03Mb]","NEIGHBORS[26082]"] |
| NRIP1--LINC02246 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NRIP1^ENSG00000180530.11 | chr21:15064745:- | LINC02246^ENSG00000281903.2 | chr21:14857708:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2291:29687:4391 | . | NO_LDAS | 0.0039 | GT | 1.2729 | AG | 1.5546 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr21:0.04Mb]","NEIGHBORS[42683]"] |
| NPTN--SATB1-AS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NPTN^ENSG00000156642.17 | chr15:73633566:- | SATB1-AS1^ENSG00000228956.8 | chr3:18445284:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1154:10522:16764 | . | NO_LDAS | 0.0039 | GT | 1.2419 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr15--chr3]"] |
| NPTN--LPP | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | NPTN^ENSG00000156642.17 | chr15:73587524:- | LPP^ENSG00000145012.13 | chr3:188609161:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1160:12286:11103 | . | NO_LDAS | 0.0019 | GT | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr15--chr3]"] |
| NPM3--RN7SL144P | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | NPM3^ENSG00000107833.10 | chr10:101783325:- | RN7SL144P^ENSG00000242559.3 | chrX:41683266:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2127:23523:17927 | . | NO_LDAS | 0.0013 | GT | 1.4716 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr10--chrX]"] |
| NPIPB3--PDXDC2P | 1 | 0 | 0.33 | 0.00 | ONLY_REF_SPLICE | NPIPB3^ENSG00000169246.16 | chr16:21421806:- | PDXDC2P^ENSG00000255185.6 | chr16:70031968:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1136:7334:25536 | . | YES_LDAS | 0.0013 | GT | 1.9656 | AG | 1.5058 | ["INTRACHROMOSOMAL[chr16:48.56Mb]"] |
| NPIPB15--TRIM72 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NPIPB15^ENSG00000196436.8 | chr16:74378039:+ | TRIM72^ENSG00000177238.14 | chr16:31231208:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1108:1526:17577 | . | YES_LDAS | 0.0039 | GT | 1.5546 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr16:43.15Mb]"] |
| NOTCH3--PML | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NOTCH3^ENSG00000074181.9 | chr19:15185536:- | PML^ENSG00000140464.20 | chr15:73994870:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2476:39622:23532 | . | NO_LDAS | 0.0039 | GT | 1.6049 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr19--chr15]"] |
| NOTCH2--AC126177.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NOTCH2^ENSG00000134250.20 | chr1:119916083:- | AC126177.2^ENSG00000257392.1 | chr12:107889756:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2322:10449:22411 | . | NO_LDAS | 0.0039 | GC | 1.9329 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr1--chr12]"] |
| NOS1AP--DLX4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NOS1AP^ENSG00000198929.13 | chr1:162287436:+ | DLX4^ENSG00000108813.11 | chr17:49974079:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2210:1429:1294 | . | NO_LDAS | 0.0039 | GT | 0.8366 | AG | 1.5329 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| NOMO2--NR2C2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | NOMO2^ENSG00000185164.14 | chr16:18434719:- | NR2C2^ENSG00000177463.15 | chr3:15003913:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2327:11687:20463 | . | NO_LDAS | 0.0019 | GT | 1.7056 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr16--chr3]"] |
| NOL4--YLPM1 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | NOL4^ENSG00000101746.16 | chr18:34222990:- | YLPM1^ENSG00000119596.18 | chr14:74855217:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1255:19194:9646 | . | YES_LDAS | 0.0019 | GT | 1.8892 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr18--chr14]"] |
| NME4--HBE1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NME4^ENSG00000103202.13 | chr16:399480:+ | HBE1^ENSG00000213931.7 | chr11:5269588:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1101:19736:9435 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr16--chr11]"] |
| NME3--NME2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NME3^ENSG00000103024.7 | chr16:1771070:- | NME2^ENSG00000243678.12 | chr17:51169937:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1465:42121:19510 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr16--chr17]"] |
| NKX2-8--GMIP | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NKX2-8^ENSG00000136327.7 | chr14:36581066:- | GMIP^ENSG00000089639.11 | chr19:19643631:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1297:22633:17983 | . | NO_LDAS | 0.0039 | GT | 0.9183 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr14--chr19]"] |
| NFATC2--AL021920.2 | 1 | 0 | 0.25 | 0.00 | ONLY_REF_SPLICE | NFATC2^ENSG00000101096.20 | chr20:51516784:- | AL021920.2^ENSG00000280114.1 | chr1:16686755:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1231:32834:16428 | . | NO_LDAS | 0.001 | GT | 1.9329 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr20--chr1]"] |
| NDRG1--DIDO1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NDRG1^ENSG00000104419.17 | chr8:133247873:- | DIDO1^ENSG00000101191.17 | chr20:62881018:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1107:24785:24793 | . | NO_LDAS | 0.0039 | AT | 1.7968 | AC | 1.9219 | ["INTERCHROMOSOMAL[chr8--chr20]"] |
| NCK1--RYBP | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NCK1^ENSG00000158092.7 | chr3:136862319:+ | RYBP^ENSG00000163602.11 | chr3:72379427:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2173:10983:21878 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7968 | ["INTRACHROMOSOMAL[chr3:64.42Mb]"] |
| NCAPH--C3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NCAPH^ENSG00000121152.10 | chr2:96341894:+ | C3^ENSG00000125730.17 | chr19:6677803:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2331:20618:16736 | . | NO_LDAS | 0.0039 | GT | 1.6049 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr2--chr19]"] |
| NBPF12--FAM166A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NBPF12^ENSG00000268043.7 | chr1:146970719:+ | FAM166A^ENSG00000188163.8 | chr9:137244424:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2216:17576:28926 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr1--chr9]"] |
| NAV2--WARS1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NAV2^ENSG00000166833.22 | chr11:19351027:+ | WARS1^ENSG00000140105.18 | chr14:100354566:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1235:21646:29445 | . | YES_LDAS | 0.0039 | GT | 1.5329 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr11--chr14]"] |
| NAGK--FNDC3B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NAGK^ENSG00000124357.13 | chr2:71072751:+ | FNDC3B^ENSG00000075420.13 | chr3:172343022:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2122:16557:14522 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr2--chr3]"] |
| NAGA--ATP6V1E1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | NAGA^ENSG00000198951.12 | chr22:42062827:- | ATP6V1E1^ENSG00000131100.13 | chr22:17619127:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1205:36847:15391 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr22:24.43Mb]"] |
| NAB1--CCDC71L | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | NAB1^ENSG00000138386.17 | chr2:190659995:+ | CCDC71L^ENSG00000253276.4 | chr7:106660681:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1248:21306:16834 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr2--chr7]"] |
| MYO18A--TWSG1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | MYO18A^ENSG00000196535.17 | chr17:29107076:- | TWSG1^ENSG00000128791.12 | chr18:9396334:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1120:51959:14073 | . | NO_LDAS | 0.0013 | GT | 1.6895 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr17--chr18]"] |
| MYO18A--NICN1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | MYO18A^ENSG00000196535.17 | chr17:29107076:- | NICN1^ENSG00000145029.14 | chr3:49425917:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1120:51959:14073 | . | NO_LDAS | 0.0013 | GT | 1.6895 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr17--chr3]"] |
| MYH11--AC005329.1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | MYH11^ENSG00000133392.18 | chr16:15732574:- | AC005329.1^ENSG00000248015.7 | chr19:1393098:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1233:2553:7137 | . | NO_LDAS | 0.0013 | GT | 1.9086 | AG | 1.5219 | ["INTERCHROMOSOMAL[chr16--chr19]"] |
| MYC--ATRX | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MYC^ENSG00000136997.21 | chr8:127739019:+ | ATRX^ENSG00000085224.23 | chrX:77652334:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2261:34387:8973 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 0.9710 | ["INTERCHROMOSOMAL[chr8--chrX]"] |
| MSI1--AC011921.1 | 1 | 0 | 0.17 | 0.00 | INCL_NON_REF_SPLICE | MSI1^ENSG00000135097.7 | chr12:120369115:- | AC011921.1^ENSG00000259349.2 | chr17:60550737:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2313:47234:9225 | . | NO_LDAS | 0.0007 | GC | 1.3383 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr12--chr17]"] |
| MSANTD3--TMEFF1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | MSANTD3^ENSG00000066697.15 | chr9:100442356:+ | TMEFF1^ENSG00000241697.5 | chr9:100498765:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1312:7343:14228 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.5656 | ["INTRACHROMOSOMAL[chr9:0.02Mb]","NEIGHBORS[21415]"] |
| MRPS11--SLC16A4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MRPS11^ENSG00000181991.16 | chr15:88475243:+ | SLC16A4^ENSG00000168679.18 | chr1:110363737:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1478:30868:5120 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.2366 | ["INTERCHROMOSOMAL[chr15--chr1]"] |
| MRPL23--SLC9A3R2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MRPL23^ENSG00000214026.11 | chr11:1956554:+ | SLC9A3R2^ENSG00000065054.14 | chr16:2032802:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1124:40010:21234 | . | NO_LDAS | 0.0039 | GC | 1.7232 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr11--chr16]"] |
| MROH1--TNS3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MROH1^ENSG00000179832.17 | chr8:144242515:+ | TNS3^ENSG00000136205.17 | chr7:47278425:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1159:41628:5260 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr8--chr7]"] |
| MOB3A--AP3D1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | MOB3A^ENSG00000172081.14 | chr19:2096226:- | AP3D1^ENSG00000065000.19 | chr19:2102268:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1286:25852:24513 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.9656 | ["DEEPEST2019","INTRACHROMOSOMAL[chr19:0.00Mb]","LOCAL_REARRANGEMENT:-:[4315]"] |
| MMP24OS--KRBA1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MMP24OS^ENSG00000126005.17 | chr20:35277784:- | KRBA1^ENSG00000133619.17 | chr7:149730240:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2204:23417:9085 | . | YES_LDAS | 0.0039 | GC | 1.2419 | AG | 1.2419 | ["INTERCHROMOSOMAL[chr20--chr7]"] |
| MMP14--LRP2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MMP14^ENSG00000157227.14 | chr14:22841639:+ | LRP2^ENSG00000081479.15 | chr2:169289107:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2304:34598:16371 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr14--chr2]"] |
| MIR552--WWP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MIR552^ENSG00000207941.1 | chr1:34669630:- | WWP1^ENSG00000123124.14 | chr8:86438585:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1491:30132:23938 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr1--chr8]"] |
| MIR23AHG--RAB37 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MIR23AHG^ENSG00000267519.6 | chr19:13841862:- | RAB37^ENSG00000172794.20 | chr17:74745271:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1333:17180:28464 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.3710 | ["INTERCHROMOSOMAL[chr19--chr17]"] |
| MICALL1--LINC02018 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | MICALL1^ENSG00000100139.14 | chr22:37922426:+ | LINC02018^ENSG00000272690.6 | chr3:75446468:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1138:15950:20954 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr22--chr3]"] |
| MICALL1--AL354854.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MICALL1^ENSG00000100139.14 | chr22:37924717:+ | AL354854.1^ENSG00000223421.1 | chr9:31166843:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1204:7690:13009 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr22--chr9]"] |
| MIA3--LRRC8C-DT | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MIA3^ENSG00000154305.18 | chr1:222652332:+ | LRRC8C-DT^ENSG00000231999.7 | chr1:89620618:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1263:15335:23111 | . | NO_LDAS | 0.0039 | GT | 1.1589 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr1:132.99Mb]"] |
| MGRN1--AC061975.6 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | MGRN1^ENSG00000102858.13 | chr16:4688924:+ | AC061975.6^ENSG00000266830.1 | chr17:28247928:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2339:16242:9491 | . | NO_LDAS | 0.0013 | GC | 1.8323 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr16--chr17]"] |
| MEGF8--HCFC1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MEGF8^ENSG00000105429.13 | chr19:42355856:+ | HCFC1^ENSG00000172534.14 | chrX:153956732:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2219:49775:11888 | . | NO_LDAS | 0.0039 | GT | 1.5329 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr19--chrX]"] |
| MED18--SEC22B | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | MED18^ENSG00000130772.14 | chr1:28330721:+ | SEC22B^ENSG00000265808.4 | chr1:120157151:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2113:49354:1126 | . | NO_LDAS | 0.001 | GT | 1.8892 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr1:91.81Mb]"] |
| MDGA2--RAB11FIP3 | 1 | 0 | 0.11 | 0.00 | INCL_NON_REF_SPLICE | MDGA2^ENSG00000139915.21 | chr14:47675016:- | RAB11FIP3^ENSG00000090565.17 | chr16:425863:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1427:33222:2920 | . | NO_LDAS | 0.0004 | GC | 0.9183 | AG | 1.4295 | ["INTERCHROMOSOMAL[chr14--chr16]"] |
| MCM5--ABHD2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | MCM5^ENSG00000100297.16 | chr22:35406563:+ | ABHD2^ENSG00000140526.18 | chr15:89198845:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1373:38376:3382 | . | NO_LDAS | 0.0019 | GT | 1.9656 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr22--chr15]"] |
| MCL1--WBP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MCL1^ENSG00000143384.14 | chr1:150574737:- | WBP1^ENSG00000239779.7 | chr2:74460395:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2187:19316:17282 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr1--chr2]"] |
| MCFD2--ZNF761 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | MCFD2^ENSG00000180398.13 | chr2:46910780:- | ZNF761^ENSG00000160336.16 | chr19:53454650:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1175:16767:3760 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr2--chr19]"] |
| MCC--BSPRY | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MCC^ENSG00000171444.18 | chr5:113488579:- | BSPRY^ENSG00000119411.11 | chr9:113370102:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1104:47663:11061 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr5--chr9]"] |
| MBTPS1--KRT8P6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MBTPS1^ENSG00000140943.17 | chr16:84059302:- | KRT8P6^ENSG00000214930.2 | chrX:138488689:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2368:10465:18347 | . | NO_LDAS | 0.0039 | GT | 1.5219 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr16--chrX]"] |
| MAST2--LINC02043 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | MAST2^ENSG00000086015.22 | chr1:45804072:+ | LINC02043^ENSG00000232233.1 | chr3:186812081:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2269:42542:18726 | . | YES_LDAS | 0.0039 | GT | 1.3996 | AG | 1.6729 | ["INTERCHROMOSOMAL[chr1--chr3]"] |
| MARCHF8--AC093525.10 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | MARCHF8^ENSG00000165406.16 | chr10:45533110:- | AC093525.10^ENSG00000280402.1 | chr16:2578960:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2182:12269:22845 | . | NO_LDAS | 0.0019 | GT | 1.2867 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr10--chr16]"] |
| MAP3K1--AGO3 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | MAP3K1^ENSG00000095015.6 | chr5:56859909:+ | AGO3^ENSG00000126070.20 | chr1:36061769:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2131:34849:13891 | . | NO_LDAS | 0.0019 | GT | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr5--chr1]"] |
| MAGI1--MECOM | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | MAGI1^ENSG00000151276.23 | chr3:66037996:- | MECOM^ENSG00000085276.19 | chr3:169143832:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1201:42874:23308 | . | NO_LDAS | 0.0039 | GT | 1.8256 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr3:103.04Mb]"] |
| LYRM4--TRIO | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LYRM4^ENSG00000214113.11 | chr6:5260648:- | TRIO^ENSG00000038382.20 | chr5:14381130:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2282:25950:19804 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr6--chr5]"] |
| LUCAT1--PIGL | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LUCAT1^ENSG00000248323.7 | chr5:91313638:- | PIGL^ENSG00000108474.17 | chr17:16299888:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2166:37623:2667 | . | YES_LDAS | 0.0039 | GT | 1.3383 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr5--chr17]"] |
| LTBP3--HMCN2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LTBP3^ENSG00000168056.17 | chr11:65553164:- | HMCN2^ENSG00000148357.16 | chr9:130432429:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1293:35763:10234 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr11--chr9]"] |
| LSR--AL080285.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LSR^ENSG00000105699.17 | chr19:35267685:+ | AL080285.2^ENSG00000275716.1 | chr6:100093502:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1484:44160:4321 | . | NO_LDAS | 0.0039 | GT | 0.8366 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr19--chr6]"] |
| LRP1--C7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LRP1^ENSG00000123384.14 | chr12:57176063:+ | C7^ENSG00000112936.19 | chr5:40983994:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1315:48407:26054 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr12--chr5]"] |
| LNCOG--COA1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LNCOG^ENSG00000257219.6 | chr12:76302879:+ | COA1^ENSG00000106603.19 | chr7:43650712:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1143:20133:19903 | . | YES_LDAS | 0.0039 | GT | 1.9899 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr12--chr7]"] |
| LINC02802--AC245060.4 | 1 | 0 | 0.33 | 0.00 | ONLY_REF_SPLICE | LINC02802^ENSG00000232527.8 | chr1:144250225:- | AC245060.4^ENSG00000272779.1 | chr22:22303224:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2160:6712:23027 | . | YES_LDAS | 0.0013 | GT | 1.9329 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr1--chr22]"] |
| LINC02699--FURIN | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LINC02699^ENSG00000254456.6 | chr11:25774309:+ | FURIN^ENSG00000140564.13 | chr15:90880094:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1495:12140:10682 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr11--chr15]"] |
| LINC01659--AP000344.1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LINC01659^ENSG00000234928.1 | chr22:23434061:+ | AP000344.1^ENSG00000227755.1 | chr22:23460353:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2179:39759:25283 | . | YES_LDAS | 0.0039 | GT | 1.4566 | AG | 1.6402 | ["INTRACHROMOSOMAL[chr22:0.01Mb]","NEIGHBORS[11527]"] |
| LINC01499--SCAPER | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LINC01499^ENSG00000255171.7 | chr11:41718427:+ | SCAPER^ENSG00000140386.13 | chr15:76841931:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2273:42332:16904 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr11--chr15]"] |
| LINC00461--FBXO31 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LINC00461^ENSG00000245526.11 | chr5:88670958:- | FBXO31^ENSG00000103264.18 | chr16:87336264:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2398:46644:22271 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr5--chr16]"] |
| LIMD1--RNGTT | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LIMD1^ENSG00000144791.10 | chr3:45596287:+ | RNGTT^ENSG00000111880.16 | chr6:88941180:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1192:30302:25213 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr3--chr6]"] |
| LIMD1--HDAC8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LIMD1^ENSG00000144791.10 | chr3:45681025:+ | HDAC8^ENSG00000147099.21 | chrX:72422287:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2329:45705:10332 | . | NO_LDAS | 0.0039 | GT | 0.0000 | AG | 1.3753 | ["INTERCHROMOSOMAL[chr3--chrX]"] |
| LGSN--UBR4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LGSN^ENSG00000146166.17 | chr6:63277949:- | UBR4^ENSG00000127481.15 | chr1:19169532:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1385:11007:3116 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr6--chr1]"] |
| LGMN--TRAK1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LGMN^ENSG00000100600.15 | chr14:92741062:- | TRAK1^ENSG00000182606.17 | chr3:42188045:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1492:39646:28562 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr14--chr3]"] |
| LGMN--RIN3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LGMN^ENSG00000100600.15 | chr14:92748489:- | RIN3^ENSG00000100599.16 | chr14:92555751:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1230:27139:22733 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.8062 | ["INTRACHROMOSOMAL[chr14:0.01Mb]","LOCAL_INVERSION:-:+:[14813]"] |
| LGI2--ITGA6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LGI2^ENSG00000153012.12 | chr4:25030696:- | ITGA6^ENSG00000091409.15 | chr2:172427707:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2335:13612:9758 | . | NO_LDAS | 0.0039 | GC | 1.2419 | AG | 1.5219 | ["INTERCHROMOSOMAL[chr4--chr2]"] |
| LENG8--TMEM198B | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | LENG8^ENSG00000167615.17 | chr19:54458521:+ | TMEM198B^ENSG00000182796.14 | chr12:55832871:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1274:19114:2695 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr19--chr12]"] |
| LENG8--KHSRP | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | LENG8^ENSG00000167615.17 | chr19:54456777:+ | KHSRP^ENSG00000088247.18 | chr19:6415734:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1148:35747:28142 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.8256 | ["INTRACHROMOSOMAL[chr19:48.02Mb]"] |
| KRT7--MFSD4B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KRT7^ENSG00000135480.16 | chr12:52248211:+ | MFSD4B^ENSG00000173214.7 | chr6:111274776:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1142:43634:2457 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr12--chr6]"] |
| KRT10--KRT19 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | KRT10^ENSG00000186395.9 | chr17:40820511:- | KRT19^ENSG00000171345.13 | chr17:41524540:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1105:52072:2527 | . | YES_LDAS | 0.0039 | GT | 1.5058 | AG | 1.9656 | ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr17:0.70Mb]"] |
| KLF6--ZSCAN4 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | KLF6^ENSG00000067082.15 | chr10:3781641:- | ZSCAN4^ENSG00000180532.10 | chr19:57678778:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1189:14122:19580 | . | NO_LDAS | 0.0013 | GT | 1.5850 | AG | 1.8295 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr10--chr19]"] |
| KHDRBS1--TRAPPC9 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | KHDRBS1^ENSG00000121774.18 | chr1:32014377:+ | TRAPPC9^ENSG00000167632.18 | chr8:140405698:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2456:33142:7235 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr1--chr8]"] |
| KHDC4--ATP1A1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | KHDC4^ENSG00000132680.11 | chr1:155915873:- | ATP1A1^ENSG00000163399.16 | chr1:116388638:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1119:5207:4559 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr1:39.50Mb]"] |
| KF456478.1--UBALD2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KF456478.1^ENSG00000267688.1 | chr19:3122079:- | UBALD2^ENSG00000185262.9 | chr17:76270447:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2327:48448:14942 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr19--chr17]"] |
| KDM4A--IGSF1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KDM4A^ENSG00000066135.13 | chr1:43668019:+ | IGSF1^ENSG00000147255.19 | chrX:131281917:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2365:42097:15096 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr1--chrX]"] |
| KCNT1--GOLGA8A | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | KCNT1^ENSG00000107147.14 | chr9:135792225:+ | GOLGA8A^ENSG00000175265.17 | chr15:34382526:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1363:36798:29543 | . | NO_LDAS | 0.0019 | GT | 1.7232 | AG | 1.5301 | ["INTERCHROMOSOMAL[chr9--chr15]"] |
| KCNN4--KDM3B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KCNN4^ENSG00000104783.14 | chr19:43781182:- | KDM3B^ENSG00000120733.14 | chr5:138425415:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2216:11922:7698 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr19--chr5]"] |
| KCNMB2-AS1--ZMAT3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | KCNMB2-AS1^ENSG00000237978.6 | chr3:178801793:- | ZMAT3^ENSG00000172667.11 | chr3:179004184:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1342:24607:26923 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9219 | ["INTRACHROMOSOMAL[chr3:0.02Mb]","LOCAL_REARRANGEMENT:-:[22769]"] |
| KCNJ6--SPRED2 | 1 | 0 | 0.12 | 0.00 | INCL_NON_REF_SPLICE | KCNJ6^ENSG00000157542.11 | chr21:37610018:- | SPRED2^ENSG00000198369.10 | chr2:65432243:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1274:36992:9702 | . | NO_LDAS | 0.0005 | GT | 1.6402 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr21--chr2]"] |
| KCNJ6--IL10RA | 1 | 0 | 0.12 | 0.00 | INCL_NON_REF_SPLICE | KCNJ6^ENSG00000157542.11 | chr21:37610018:- | IL10RA^ENSG00000110324.11 | chr11:117995274:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1274:36992:9702 | . | NO_LDAS | 0.0005 | GT | 1.6402 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr21--chr11]"] |
| KCNJ11--NELFB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | KCNJ11^ENSG00000187486.6 | chr11:17387405:- | NELFB^ENSG00000188986.9 | chr9:137263037:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1260:45956:1743 | . | NO_LDAS | 0.0039 | GT | 1.5058 | AG | 1.6729 | ["INTERCHROMOSOMAL[chr11--chr9]"] |
| KAT2B--KAT2A | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | KAT2B^ENSG00000114166.8 | chr3:20099954:+ | KAT2A^ENSG00000108773.11 | chr17:42119718:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1149:48076:2443 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8323 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chr17]"] |
| KAT2B--KAT2A | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | KAT2B^ENSG00000114166.8 | chr3:20072459:+ | KAT2A^ENSG00000108773.11 | chr17:42120370:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1497:3063:5302 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8295 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chr17]"] |
| JMJD1C--KDM3A | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | JMJD1C^ENSG00000171988.19 | chr10:63521738:- | KDM3A^ENSG00000115548.17 | chr2:86449807:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2235:33344:16778 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.4295 | ["INTERCHROMOSOMAL[chr10--chr2]"] |
| JAZF1--CBX6 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | JAZF1^ENSG00000153814.13 | chr7:27831453:- | CBX6^ENSG00000183741.12 | chr22:38871757:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1113:51263:1575 | . | NO_LDAS | 0.0019 | GT | 1.6895 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr7--chr22]"] |
| JAG2--WDR1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | JAG2^ENSG00000184916.9 | chr14:105151956:- | WDR1^ENSG00000071127.17 | chr4:10077445:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2391:16614:11705 | . | NO_LDAS | 0.0039 | GC | 1.9086 | AG | 1.5329 | ["INTERCHROMOSOMAL[chr14--chr4]"] |
| ITSN2--DOCK1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ITSN2^ENSG00000198399.15 | chr2:24360304:- | DOCK1^ENSG00000150760.13 | chr10:126970702:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2246:27956:23756 | . | YES_LDAS | 0.0039 | GT | 1.3996 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr2--chr10]"] |
| ITPR2--TMEM44-AS1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ITPR2^ENSG00000123104.12 | chr12:26832690:- | TMEM44-AS1^ENSG00000231770.6 | chr3:194589021:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2296:41062:5260 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr12--chr3]"] |
| ITPR2--ITPR3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ITPR2^ENSG00000123104.12 | chr12:26657707:- | ITPR3^ENSG00000096433.11 | chr6:33670325:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1365:44209:27581 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.9899 | ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr12--chr6]"] |
| ITGA9--GOLGA4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ITGA9^ENSG00000144668.12 | chr3:37542585:+ | GOLGA4^ENSG00000144674.16 | chr3:37335053:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2188:7569:6325 | . | YES_LDAS | 0.0039 | GT | 1.9219 | AG | 1.8323 | ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr3:0.09Mb]","LOCAL_REARRANGEMENT:+:[85364]"] |
| ITGA7--DTNB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ITGA7^ENSG00000135424.18 | chr12:55707878:- | DTNB^ENSG00000138101.19 | chr2:25427631:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1339:30828:25564 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr12--chr2]"] |
| IRX2--AC005104.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IRX2^ENSG00000170561.13 | chr5:2746746:- | AC005104.1^ENSG00000223374.1 | chr2:241351562:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2164:47089:9814 | . | NO_LDAS | 0.0039 | GT | 0.0000 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr5--chr2]"] |
| IRAK1--NKAIN3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IRAK1^ENSG00000184216.14 | chrX:154019232:- | NKAIN3^ENSG00000185942.13 | chr8:62982820:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1396:16751:3284 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.7819 | ["INTERCHROMOSOMAL[chrX--chr8]"] |
| IQGAP1--ZNF774 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | IQGAP1^ENSG00000140575.13 | chr15:90390873:+ | ZNF774^ENSG00000196391.11 | chr15:90354642:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1136:2311:18992 | . | YES_LDAS | 0.0039 | GT | 1.2867 | AG | 1.9899 | ["TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr15:0.02Mb]","LOCAL_REARRANGEMENT:+:[19096]"] |
| ILK--ADGRE2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ILK^ENSG00000166333.14 | chr11:6610035:+ | ADGRE2^ENSG00000127507.18 | chr19:14766987:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1259:35350:24765 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr11--chr19]"] |
| IL20RA--G2E3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IL20RA^ENSG00000016402.13 | chr6:137008599:- | G2E3^ENSG00000092140.16 | chr14:30618275:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1186:40325:26348 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr6--chr14]"] |
| IL17REL--AMY1B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IL17REL^ENSG00000188263.10 | chr22:49996379:- | AMY1B^ENSG00000174876.16 | chr1:103693382:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1123:35585:20015 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr22--chr1]"] |
| IL17D--PRSS23 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | IL17D^ENSG00000172458.4 | chr13:20721729:+ | PRSS23^ENSG00000150687.12 | chr11:86807636:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1334:8451:14662 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr13--chr11]"] |
| IL10RB--CHD2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | IL10RB^ENSG00000243646.10 | chr21:33288261:+ | CHD2^ENSG00000173575.22 | chr15:93020012:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1169:48205:27105 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr21--chr15]"] |
| IFT140--PRKACG | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | IFT140^ENSG00000187535.14 | chr16:1526619:- | PRKACG^ENSG00000165059.8 | chr9:69014071:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1477:48877:29669 | . | NO_LDAS | 0.0019 | GT | 1.8892 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr16--chr9]"] |
| IER3IP1--DTNB | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | IER3IP1^ENSG00000134049.6 | chr18:47176187:- | DTNB^ENSG00000138101.19 | chr2:25596240:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1438:22228:16974 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr18--chr2]"] |
| HTR1A--SETD1A | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HTR1A^ENSG00000178394.5 | chr5:63959659:- | SETD1A^ENSG00000099381.18 | chr16:30966884:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2121:31071:11299 | . | NO_LDAS | 0.0039 | GT | 1.2310 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr5--chr16]"] |
| HSP90B1--FHAD1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HSP90B1^ENSG00000166598.16 | chr12:103931583:+ | FHAD1^ENSG00000142621.19 | chr1:15382158:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1102:12318:10767 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr12--chr1]"] |
| HSF4--PPAN | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HSF4^ENSG00000102878.17 | chr16:67167840:+ | PPAN^ENSG00000130810.20 | chr19:10110502:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2381:32041:7628 | . | NO_LDAS | 0.0039 | GT | 1.4256 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr16--chr19]"] |
| HSF1--RFWD3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HSF1^ENSG00000185122.11 | chr8:144291874:+ | RFWD3^ENSG00000168411.14 | chr16:74664579:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2407:10473:5442 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr8--chr16]"] |
| HSDL1--CTNNA1 | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | HSDL1^ENSG00000103160.12 | chr16:84145080:- | CTNNA1^ENSG00000044115.21 | chr5:138904349:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1465:10182:1126 | . | NO_LDAS | 0.0019 | GT | 1.8256 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr16--chr5]"] |
| HOXA10--TMEM63A | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | HOXA10^ENSG00000253293.5 | chr7:27174141:- | TMEM63A^ENSG00000196187.12 | chr1:225862028:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1366:20901:4195 | . | NO_LDAS | 0.0013 | GT | 1.1589 | AG | 1.0530 | ["INTERCHROMOSOMAL[chr7--chr1]"] |
| HNRNPC--CFL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HNRNPC^ENSG00000092199.18 | chr14:21230319:- | CFL1^ENSG00000172757.13 | chr11:65826496:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1184:41636:27077 | . | NO_LDAS | 0.0039 | GT | 1.8256 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr14--chr11]"] |
| HMGA2--ABCC5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HMGA2^ENSG00000149948.14 | chr12:65824769:+ | ABCC5^ENSG00000114770.17 | chr3:183920257:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2392:23409:11005 | . | NO_LDAS | 0.0039 | GC | 0.9968 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr12--chr3]"] |
| HMGA1--RUNDC3B | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | HMGA1^ENSG00000137309.20 | chr6:34243522:+ | RUNDC3B^ENSG00000105784.15 | chr7:87777912:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1108:27236:16091 | . | NO_LDAS | 0.0019 | GT | 1.8295 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr6--chr7]"] |
| HLA-A--RUFY1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HLA-A^ENSG00000206503.13 | chr6:29945281:+ | RUFY1^ENSG00000176783.15 | chr5:179609464:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1114:3217:10248 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr6--chr5]"] |
| HLA-A--C12orf40 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | HLA-A^ENSG00000206503.13 | chr6:29942951:+ | C12orf40^ENSG00000180116.15 | chr12:39716794:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1171:12464:6030 | . | NO_LDAS | 0.0019 | AT | 1.5656 | AC | 1.7056 | ["INTERCHROMOSOMAL[chr6--chr12]"] |
| HDAC7--MMP24OS | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HDAC7^ENSG00000061273.18 | chr12:47798108:- | MMP24OS^ENSG00000126005.17 | chr20:35277806:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1253:38966:15615 | . | NO_LDAS | 0.0039 | GT | 1.9219 | AG | 1.1033 | ["INTERCHROMOSOMAL[chr12--chr20]"] |
| HBEGF--ADPRHL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | HBEGF^ENSG00000113070.8 | chr5:140333477:- | ADPRHL1^ENSG00000153531.13 | chr13:113403058:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1473:36709:12630 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr5--chr13]"] |
| H1-0--KCTD7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | H1-0^ENSG00000189060.5 | chr22:37806409:+ | KCTD7^ENSG00000243335.10 | chr7:66638511:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2347:1752:18641 | . | NO_LDAS | 0.0039 | GT | 1.2419 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr22--chr7]"] |
| GTF2I--ANKRD13D | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | GTF2I^ENSG00000263001.7 | chr7:74758008:+ | ANKRD13D^ENSG00000172932.16 | chr11:67302471:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1435:8710:25367 | . | NO_LDAS | 0.0013 | GT | 1.5329 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr7--chr11]"] |
| GSTK1--TRAPPC4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GSTK1^ENSG00000197448.14 | chr7:143265296:+ | TRAPPC4^ENSG00000196655.12 | chr11:119023361:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2246:25157:12518 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr7--chr11]"] |
| GRSF1--ZACN | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GRSF1^ENSG00000132463.14 | chr4:70839517:- | ZACN^ENSG00000186919.13 | chr17:76080912:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2379:1534:29025 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr4--chr17]"] |
| GRHL1--TMEM179B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GRHL1^ENSG00000134317.18 | chr2:9990747:+ | TMEM179B^ENSG00000185475.11 | chr11:62790255:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2148:17868:24779 | . | NO_LDAS | 0.0039 | GC | 1.0530 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr2--chr11]"] |
| GPR146--ADIRF | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | GPR146^ENSG00000164849.10 | chr7:1044658:+ | ADIRF^ENSG00000148671.14 | chr10:86970200:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2445:9834:11733 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr7--chr10]"] |
| GOLPH3--PITPNM1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GOLPH3^ENSG00000113384.14 | chr5:32174083:- | PITPNM1^ENSG00000110697.13 | chr11:67504218:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1453:6283:23882 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr5--chr11]"] |
| GOLPH3--AC113385.3 | 1 | 0 | 0.07 | 0.00 | ONLY_REF_SPLICE | GOLPH3^ENSG00000113384.14 | chr5:32143749:- | AC113385.3^ENSG00000275374.1 | chr5:100381398:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1351:1639:9758 | . | YES_LDAS | 0.0003 | GT | 1.7232 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr5:68.20Mb]"] |
| GOLM2--NEK6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GOLM2^ENSG00000166734.20 | chr15:44289185:+ | NEK6^ENSG00000119408.17 | chr9:124258044:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2121:16266:25031 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr15--chr9]"] |
| GOLGA8A--MTPAP | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | GOLGA8A^ENSG00000175265.17 | chr15:34383746:- | MTPAP^ENSG00000107951.15 | chr10:30369133:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2204:33101:16133 | . | NO_LDAS | 0.0019 | GT | 1.8323 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr15--chr10]"] |
| GOLGA8A--CCDC134 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | GOLGA8A^ENSG00000175265.17 | chr15:34381968:- | CCDC134^ENSG00000100147.14 | chr22:41809896:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2280:43206:13233 | . | NO_LDAS | 0.0019 | GT | 0.9968 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr15--chr22]"] |
| GLUL--LHFPL5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GLUL^ENSG00000135821.19 | chr1:182392097:- | LHFPL5^ENSG00000197753.11 | chr6:35814635:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2273:48642:29095 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr1--chr6]"] |
| GHR--ITGA1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | GHR^ENSG00000112964.14 | chr5:42629103:+ | ITGA1^ENSG00000213949.10 | chr5:52881873:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1159:33975:15377 | . | YES_LDAS | 0.0039 | GT | 1.7465 | AG | 1.8256 | ["INTRACHROMOSOMAL[chr5:10.07Mb]"] |
| GDF2--EIF4G1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GDF2^ENSG00000263761.3 | chr10:47323014:+ | EIF4G1^ENSG00000114867.22 | chr3:184327279:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2143:34768:29053 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.4716 | ["INTERCHROMOSOMAL[chr10--chr3]"] |
| GCSH--C16orf46 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | GCSH^ENSG00000140905.11 | chr16:81096131:- | C16orf46^ENSG00000166455.14 | chr16:81062138:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2419:52105:25115 | . | YES_LDAS | 0.0039 | GT | 1.5301 | AG | 1.7232 | ["INTRACHROMOSOMAL[chr16:0.00Mb]","NEIGHBORS[4678]"] |
| GBA--SLC25A19 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | GBA^ENSG00000177628.16 | chr1:155234692:- | SLC25A19^ENSG00000125454.12 | chr17:75277483:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1240:35124:20141 | . | NO_LDAS | 0.0019 | GT | 1.9656 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| GATD3B--CLIP1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | GATD3B^ENSG00000280071.4 | chr21:5122149:- | CLIP1^ENSG00000130779.22 | chr12:122319348:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1409:20918:9772 | . | NO_LDAS | 0.0013 | GT | 1.3996 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr21--chr12]"] |
| GALT--IL11RA | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | GALT^ENSG00000213930.12 | chr9:34649564:+ | IL11RA^ENSG00000137070.18 | chr9:34651884:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1228:46401:3438 | . | YES_LDAS | 0.0039 | GT | 1.8295 | AG | 1.9329 | ["DGD_PARALOGS","ConjoinG","Babiceanu_Normal","INTRACHROMOSOMAL[chr9:0.00Mb]","NEIGHBORS_OVERLAP:+:+:[333]"] |
| FZD4--RPL18A | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | FZD4^ENSG00000174804.4 | chr11:86954801:- | RPL18A^ENSG00000105640.13 | chr19:17861293:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1121:3039:28436 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr11--chr19]"] |
| FURIN--SFI1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FURIN^ENSG00000140564.13 | chr15:90876359:+ | SFI1^ENSG00000198089.16 | chr22:31573070:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1369:33983:20911 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr15--chr22]"] |
| FSTL1--HNRNPH1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FSTL1^ENSG00000163430.12 | chr3:120399883:- | HNRNPH1^ENSG00000169045.17 | chr5:179619318:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1203:48068:2429 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr3--chr5]"] |
| FRMPD3--MAML3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FRMPD3^ENSG00000147234.10 | chrX:107603268:+ | MAML3^ENSG00000196782.12 | chr4:139889986:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2206:41345:2331 | . | YES_LDAS | 0.0039 | GT | 1.5850 | AG | 1.4566 | ["INTERCHROMOSOMAL[chrX--chr4]"] |
| FRMD1--FGF22 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FRMD1^ENSG00000153303.17 | chr6:168079106:- | FGF22^ENSG00000070388.11 | chr19:643526:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1147:42680:26671 | . | NO_LDAS | 0.0039 | GT | 1.2419 | AG | 1.1589 | ["INTERCHROMOSOMAL[chr6--chr19]"] |
| FOXO4--PRSS55 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FOXO4^ENSG00000184481.17 | chrX:71096981:+ | PRSS55^ENSG00000184647.11 | chr8:10529538:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2245:49160:1518 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9899 | ["INTERCHROMOSOMAL[chrX--chr8]"] |
| FOXO1--LINC00598 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40350302:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2448:3581:10234 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.9656 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] |
| FOXK1--AC022382.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FOXK1^ENSG00000164916.11 | chr7:4762794:+ | AC022382.2^ENSG00000287878.1 | chr3:9693666:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1203:1396:16904 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr7--chr3]"] |
| FOXI2--SYMPK | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FOXI2^ENSG00000186766.8 | chr10:127739659:+ | SYMPK^ENSG00000125755.19 | chr19:45830204:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1188:39800:14087 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr10--chr19]"] |
| FOS--POLD1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FOS^ENSG00000170345.10 | chr14:75280711:+ | POLD1^ENSG00000062822.15 | chr19:50399463:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1466:4754:9519 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr14--chr19]"] |
| FIS1--PPIL1P1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FIS1^ENSG00000214253.9 | chr7:101240142:- | PPIL1P1^ENSG00000237951.1 | chr2:26162177:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1326:38287:17156 | . | YES_LDAS | 0.0039 | GT | 1.6895 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr7--chr2]"] |
| FHOD3--TMEM242 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FHOD3^ENSG00000134775.15 | chr18:36297970:+ | TMEM242^ENSG00000215712.11 | chr6:157290060:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1104:2974:5400 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr18--chr6]"] |
| FDCSP--PSMC6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FDCSP^ENSG00000181617.6 | chr4:70233026:+ | PSMC6^ENSG00000100519.12 | chr14:52708517:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1371:28668:23055 | . | NO_LDAS | 0.0039 | GT | 1.4716 | AG | 1.5301 | ["INTERCHROMOSOMAL[chr4--chr14]"] |
| FBXW4--XPO1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FBXW4^ENSG00000107829.15 | chr10:101667886:- | XPO1^ENSG00000082898.19 | chr2:61481268:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2435:15821:13751 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr10--chr2]"] |
| FBXL8--TMC4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | FBXL8^ENSG00000135722.9 | chr16:67161937:+ | TMC4^ENSG00000167608.12 | chr19:54163159:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1116:31596:15124 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr16--chr19]"] |
| FBRS--TRIO | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FBRS^ENSG00000156860.16 | chr16:30658642:+ | TRIO^ENSG00000038382.20 | chr5:14406573:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1404:37429:12644 | . | NO_LDAS | 0.0039 | GT | 1.6729 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr16--chr5]"] |
| FARSA--SYCE2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FARSA^ENSG00000179115.11 | chr19:12922728:- | SYCE2^ENSG00000161860.8 | chr19:12918337:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2457:46466:15180 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9086 | ["Babiceanu_Normal","INTRACHROMOSOMAL[chr19:0.00Mb]","NEIGHBORS[3186]"] |
| FANCM--LURAP1L | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FANCM^ENSG00000187790.11 | chr14:45136499:+ | LURAP1L^ENSG00000153714.6 | chr9:12821710:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1316:43772:21052 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr14--chr9]"] |
| FAM53B--PSMB1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | FAM53B^ENSG00000189319.14 | chr10:124681607:- | PSMB1^ENSG00000008018.9 | chr6:170549113:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1195:33700:9463 | . | YES_LDAS | 0.0039 | GT | 1.8256 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr10--chr6]"] |
| FAM3B--AL035530.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FAM3B^ENSG00000183844.17 | chr21:41323066:+ | AL035530.2^ENSG00000271913.7 | chr6:159027962:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2439:40690:23672 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr21--chr6]"] |
| FAM171B--SZT2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FAM171B^ENSG00000144369.13 | chr2:186694411:+ | SZT2^ENSG00000198198.17 | chr1:43428557:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1356:4632:10795 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr2--chr1]"] |
| FAM157A--NOSIP | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | FAM157A^ENSG00000236438.7 | chr3:198210368:+ | NOSIP^ENSG00000142546.14 | chr19:49560692:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1224:36847:6283 | . | YES_LDAS | 0.0019 | GT | 1.9329 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr3--chr19]"] |
| FAM117B--RASAL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | FAM117B^ENSG00000138439.12 | chr2:202635049:+ | RASAL1^ENSG00000111344.11 | chr12:113130941:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2431:37308:28520 | . | NO_LDAS | 0.0039 | GT | 1.2310 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr2--chr12]"] |
| EYA3--HNRNPA1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | EYA3^ENSG00000158161.16 | chr1:28017175:- | HNRNPA1^ENSG00000135486.19 | chr12:54284258:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1113:8321:10598 | . | NO_LDAS | 0.0019 | GT | 1.9086 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr1--chr12]"] |
| EXOC4--HERC4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | EXOC4^ENSG00000131558.15 | chr7:133480138:+ | HERC4^ENSG00000148634.16 | chr10:67966802:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1257:21460:13961 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr7--chr10]"] |
| EVA1C--DGCR2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | EVA1C^ENSG00000166979.13 | chr21:32413013:+ | DGCR2^ENSG00000070413.20 | chr22:19041959:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1140:43812:22579 | . | YES_LDAS | 0.0039 | GT | 1.8323 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr21--chr22]"] |
| ESYT2--NFATC2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ESYT2^ENSG00000117868.17 | chr7:158829089:- | NFATC2^ENSG00000101096.20 | chr20:51523596:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1109:12455:9295 | . | YES_LDAS | 0.0039 | GT | 1.6895 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr7--chr20]"] |
| ESCO1--ZC3H13 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ESCO1^ENSG00000141446.11 | chr18:21600623:- | ZC3H13^ENSG00000123200.17 | chr13:46045516:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1130:6550:9267 | . | YES_LDAS | 0.0039 | GT | 1.5058 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr18--chr13]"] |
| ERBB4--DNAH7 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ERBB4^ENSG00000178568.15 | chr2:212538449:- | DNAH7^ENSG00000118997.14 | chr2:195972466:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2446:19025:23139 | . | YES_LDAS | 0.0039 | GT | 1.9899 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr2:15.31Mb]"] |
| ERBB3--SSH1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ERBB3^ENSG00000065361.16 | chr12:56088647:+ | SSH1^ENSG00000084112.15 | chr12:108787833:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2276:46029:6325 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.4716 | ["INTRACHROMOSOMAL[chr12:52.67Mb]"] |
| ERBB2--RASIP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ERBB2^ENSG00000141736.14 | chr17:39716526:+ | RASIP1^ENSG00000105538.10 | chr19:48720628:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1319:46102:24695 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr17--chr19]"] |
| EPCAM--PITPNM2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EPCAM^ENSG00000119888.11 | chr2:47369500:+ | PITPNM2^ENSG00000090975.13 | chr12:122990673:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2417:47364:19146 | . | NO_LDAS | 0.0039 | GC | 1.5058 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr2--chr12]"] |
| EPC1--SH3TC1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | EPC1^ENSG00000120616.16 | chr10:32346763:- | SH3TC1^ENSG00000125089.17 | chr4:8231976:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1216:43820:19202 | . | YES_LDAS | 0.0039 | GT | 1.5628 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr10--chr4]"] |
| ENDOV--SPEG | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ENDOV^ENSG00000173818.17 | chr17:80415821:+ | SPEG^ENSG00000072195.15 | chr2:219451138:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2326:4972:3873 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr17--chr2]"] |
| EML6--EEF1D | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EML6^ENSG00000214595.12 | chr2:54902013:+ | EEF1D^ENSG00000104529.17 | chr8:143581326:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1116:52032:5372 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr2--chr8]"] |
| ELOBP1--C12orf43 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | ELOBP1^ENSG00000234152.1 | chr13:25365803:- | C12orf43^ENSG00000157895.11 | chr12:121003725:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1136:11630:18375 | . | NO_LDAS | 0.001 | GT | 1.9329 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr13--chr12]"] |
| ELOB--PSAPL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ELOB^ENSG00000103363.15 | chr16:2775451:- | PSAPL1^ENSG00000178597.7 | chr4:7434413:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2146:7982:1238 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr16--chr4]"] |
| EIF4H--TTTY13 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | EIF4H^ENSG00000106682.16 | chr7:74194878:+ | TTTY13^ENSG00000184991.3 | chrY:21566118:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1164:13256:24611 | . | NO_LDAS | 0.0019 | GT | 1.5301 | AG | 1.4256 | ["INTERCHROMOSOMAL[chr7--chrY]"] |
| EEF2--DPP6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EEF2^ENSG00000167658.16 | chr19:3976616:- | DPP6^ENSG00000130226.17 | chr7:154795952:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1381:45649:18221 | . | NO_LDAS | 0.0039 | GC | 1.7968 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr19--chr7]"] |
| EEF1DP7--APP | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EEF1DP7^ENSG00000263883.1 | chr17:63636813:+ | APP^ENSG00000142192.21 | chr21:26021986:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1133:24574:29417 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr17--chr21]"] |
| EEF1D--TRIM11 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | EEF1D^ENSG00000104529.17 | chr8:143586219:- | TRIM11^ENSG00000154370.16 | chr1:228402865:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1141:33716:11089 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr8--chr1]"] |
| ECH1--AL445228.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ECH1^ENSG00000104823.9 | chr19:38816284:- | AL445228.2^ENSG00000271387.1 | chr1:184386631:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2393:15538:17941 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr19--chr1]"] |
| DYRK1A--XKR6 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | DYRK1A^ENSG00000157540.22 | chr21:37420384:+ | XKR6^ENSG00000171044.11 | chr8:11195221:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1113:38780:11874 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr21--chr8]"] |
| DYRK1A--ADGRG1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DYRK1A^ENSG00000157540.22 | chr21:37481534:+ | ADGRG1^ENSG00000205336.14 | chr16:57650253:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1444:47825:1729 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr21--chr16]"] |
| DYNC1H1--ANAPC2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | DYNC1H1^ENSG00000197102.13 | chr14:102016086:+ | ANAPC2^ENSG00000176248.9 | chr9:137185087:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1401:23061:23350 | . | YES_LDAS | 0.0039 | GT | 1.9899 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr14--chr9]"] |
| DUSP5--EHBP1L1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DUSP5^ENSG00000138166.6 | chr10:110498367:+ | EHBP1L1^ENSG00000173442.13 | chr11:65585115:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2221:34549:11832 | . | NO_LDAS | 0.0039 | GT | 1.1589 | AG | 0.9710 | ["INTERCHROMOSOMAL[chr10--chr11]"] |
| DPP7--MUS81 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DPP7^ENSG00000176978.14 | chr9:137111873:- | MUS81^ENSG00000172732.12 | chr11:65860311:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2154:40560:25437 | . | NO_LDAS | 0.0039 | GT | 1.3383 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr9--chr11]"] |
| DPP4--GFM2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DPP4^ENSG00000197635.11 | chr2:162026888:- | GFM2^ENSG00000164347.18 | chr5:74741609:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1435:22900:18922 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr2--chr5]"] |
| DONSON--JPT1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DONSON^ENSG00000159147.18 | chr21:33577609:- | JPT1^ENSG00000189159.16 | chr17:75153769:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1315:42227:25353 | . | NO_LDAS | 0.0039 | GT | 0.9968 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr21--chr17]"] |
| DOCK9--MROH5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DOCK9^ENSG00000088387.19 | chr13:98848592:- | MROH5^ENSG00000226807.6 | chr8:141474013:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2428:9826:23462 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr13--chr8]"] |
| DNM2--KLC4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DNM2^ENSG00000079805.18 | chr19:10829268:+ | KLC4^ENSG00000137171.15 | chr6:43060064:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1288:49791:29571 | . | NO_LDAS | 0.0039 | GT | 1.5301 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr19--chr6]"] |
| DNASE1--LPO | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DNASE1^ENSG00000213918.10 | chr16:3611913:+ | LPO^ENSG00000167419.11 | chr17:58252182:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1158:1518:3382 | . | NO_LDAS | 0.0039 | GC | 1.4295 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr16--chr17]"] |
| DNAJB4--ATAD3B | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | DNAJB4^ENSG00000162616.9 | chr1:77981302:+ | ATAD3B^ENSG00000160072.20 | chr1:1478644:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1104:9802:15124 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr1:76.48Mb]"] |
| DNAH1--SAT2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | DNAH1^ENSG00000114841.17 | chr3:52353603:+ | SAT2^ENSG00000141504.12 | chr17:7626614:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1221:42486:14003 | . | NO_LDAS | 0.0019 | GT | 1.7968 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr3--chr17]"] |
| DLG5--PRKG2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DLG5^ENSG00000151208.17 | chr10:77841881:- | PRKG2^ENSG00000138669.9 | chr4:81174892:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2243:24048:20071 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr10--chr4]"] |
| DIP2C--NR2F1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DIP2C^ENSG00000151240.17 | chr10:689660:- | NR2F1^ENSG00000175745.14 | chr5:93584823:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2184:36960:14578 | . | NO_LDAS | 0.0039 | GT | 1.5301 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr10--chr5]"] |
| DHX58--CPSF1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DHX58^ENSG00000108771.13 | chr17:42105102:- | CPSF1^ENSG00000071894.17 | chr8:144399710:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1373:51838:23728 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr17--chr8]"] |
| DHX30--ATG3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DHX30^ENSG00000132153.15 | chr3:47846302:+ | ATG3^ENSG00000144848.11 | chr3:112537890:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2475:10037:29487 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.9086 | ["INTRACHROMOSOMAL[chr3:64.68Mb]"] |
| DHRS4-AS1--AL022326.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DHRS4-AS1^ENSG00000215256.4 | chr14:23940350:- | AL022326.1^ENSG00000224794.2 | chr22:39294309:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1161:19914:21766 | . | NO_LDAS | 0.0039 | GT | 0.3534 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr14--chr22]"] |
| DGKZ--CHRND | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | DGKZ^ENSG00000149091.15 | chr11:46367399:+ | CHRND^ENSG00000135902.10 | chr2:232534093:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1294:1866:14410 | . | NO_LDAS | 0.0019 | GT | 1.8892 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr11--chr2]"] |
| DGAT1--SELENOS | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | DGAT1^ENSG00000185000.12 | chr8:144318461:- | SELENOS^ENSG00000131871.15 | chr15:101276675:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1328:37397:12224 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr8--chr15]"] |
| DEPTOR--TRAV1-2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | DEPTOR^ENSG00000155792.10 | chr8:120049735:+ | TRAV1-2^ENSG00000256553.1 | chr14:21642876:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1269:4560:24625 | . | NO_LDAS | 0.0019 | GT | 1.7465 | AG | 1.2729 | ["INTERCHROMOSOMAL[chr8--chr14]"] |
| DENND5A--ZNF317 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DENND5A^ENSG00000184014.9 | chr11:9180760:- | ZNF317^ENSG00000130803.15 | chr19:9160912:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2367:4818:6829 | . | NO_LDAS | 0.0039 | GT | 1.5058 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr11--chr19]"] |
| DENND4B--MRPS15P1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DENND4B^ENSG00000198837.10 | chr1:153934797:- | MRPS15P1^ENSG00000259186.1 | chr15:73483279:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2498:8758:20463 | . | NO_LDAS | 0.0039 | GT | 1.5656 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr1--chr15]"] |
| DDTL--HULC | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | DDTL^ENSG00000099974.8 | chr22:23967561:+ | HULC^ENSG00000285219.2 | chr6:8856398:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1127:39031:8328 | . | YES_LDAS | 0.0019 | GT | 1.7056 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr22--chr6]"] |
| DDT--HULC | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | DDT^ENSG00000099977.14 | chr22:23973768:- | HULC^ENSG00000285219.2 | chr6:8856398:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1127:39031:8328 | . | YES_LDAS | 0.0019 | GT | 1.7056 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr22--chr6]"] |
| DDR2--RPA3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DDR2^ENSG00000162733.19 | chr1:162775725:+ | RPA3^ENSG00000106399.11 | chr7:7641083:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1256:19914:29025 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr1--chr7]"] |
| DCAF8--AC009486.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DCAF8^ENSG00000132716.19 | chr1:160239697:- | AC009486.1^ENSG00000261117.1 | chr2:12715408:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1455:47849:15335 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr1--chr2]"] |
| DAB2IP--PCDHAC2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | DAB2IP^ENSG00000136848.17 | chr9:121760038:+ | PCDHAC2^ENSG00000243232.6 | chr5:140967336:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2389:15918:18627 | . | NO_LDAS | 0.0039 | GC | 1.8892 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr9--chr5]"] |
| CYTH1--SEC14L1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CYTH1^ENSG00000108669.16 | chr17:78782202:- | SEC14L1^ENSG00000129657.16 | chr17:77190803:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1411:13378:1084 | . | YES_LDAS | 0.0039 | GT | 1.8256 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr17:1.46Mb]"] |
| CTDP1--CCDC8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CTDP1^ENSG00000060069.17 | chr18:79735924:+ | CCDC8^ENSG00000169515.8 | chr19:46411789:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1134:4220:24288 | . | NO_LDAS | 0.0039 | GT | 1.6049 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr18--chr19]"] |
| CSMD3--METTL26 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | CSMD3^ENSG00000164796.18 | chr8:112310984:- | METTL26^ENSG00000130731.16 | chr16:634705:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2470:4584:22537 | . | NO_LDAS | 0.001 | GT | 1.6729 | AG | 1.5058 | ["INTERCHROMOSOMAL[chr8--chr16]"] |
| CRACR2B--SEMA4C | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CRACR2B^ENSG00000177685.17 | chr11:830713:+ | SEMA4C^ENSG00000168758.11 | chr2:96870076:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1470:39007:8707 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr11--chr2]"] |
| CRACR2A--ETV6 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CRACR2A^ENSG00000130038.10 | chr12:3713237:- | ETV6^ENSG00000139083.11 | chr12:11884445:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1152:4940:14214 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.9219 | ["INTRACHROMOSOMAL[chr12:7.88Mb]"] |
| COX4I1--PACSIN2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | COX4I1^ENSG00000131143.10 | chr16:85801278:+ | PACSIN2^ENSG00000100266.19 | chr22:42858522:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1290:14761:2892 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr16--chr22]"] |
| COL7A1--LRRC8C | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL7A1^ENSG00000114270.18 | chr3:48565410:- | LRRC8C^ENSG00000171488.15 | chr1:89769453:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2118:23968:10682 | . | NO_LDAS | 0.0039 | GT | 1.5628 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr3--chr1]"] |
| COL6A2--CCL21 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | COL6A2^ENSG00000142173.16 | chr21:46116053:+ | CCL21^ENSG00000137077.8 | chr9:34709897:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1447:20238:25690 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr21--chr9]"] |
| COL5A2--MYH10 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL5A2^ENSG00000204262.14 | chr2:189063180:- | MYH10^ENSG00000133026.13 | chr17:8493783:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2261:47234:21836 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr2--chr17]"] |
| COL4A5--EP400 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | COL4A5^ENSG00000188153.14 | chrX:108668504:+ | EP400^ENSG00000183495.14 | chr12:132044671:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1131:46668:8889 | . | YES_LDAS | 0.0039 | GT | 1.9086 | AG | 1.9329 | ["INTERCHROMOSOMAL[chrX--chr12]"] |
| COL18A1--MBL3P | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL18A1^ENSG00000182871.16 | chr21:45490871:+ | MBL3P^ENSG00000219430.2 | chr10:79584799:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1308:26572:7740 | . | NO_LDAS | 0.0039 | GT | 1.4295 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr21--chr10]"] |
| COL17A1--PSMG3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COL17A1^ENSG00000065618.21 | chr10:104039445:- | PSMG3^ENSG00000157778.9 | chr7:1567724:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2346:19510:16217 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr10--chr7]"] |
| COBL--PRDM16-DT | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | COBL^ENSG00000106078.19 | chr7:51028119:- | PRDM16-DT^ENSG00000177133.11 | chr1:3067566:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2451:34226:22004 | . | NO_LDAS | 0.0039 | GT | 1.9219 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr7--chr1]"] |
| CNOT9--RN7SL724P | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CNOT9^ENSG00000144580.14 | chr2:218574064:+ | RN7SL724P^ENSG00000244692.3 | chr3:139609904:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1109:18167:8174 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9219 | ["INTERCHROMOSOMAL[chr2--chr3]"] |
| CMIP--CD63 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CMIP^ENSG00000153815.17 | chr16:81664424:+ | CD63^ENSG00000135404.12 | chr12:55727339:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1413:20254:20113 | . | NO_LDAS | 0.0039 | GT | 1.5219 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr16--chr12]"] |
| CLPTM1--SLC9A8 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CLPTM1^ENSG00000104853.16 | chr19:44992354:+ | SLC9A8^ENSG00000197818.12 | chr20:49888382:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1120:51587:8384 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr19--chr20]"] |
| CHMP7--LINC02476 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CHMP7^ENSG00000147457.14 | chr8:23258081:+ | LINC02476^ENSG00000225546.6 | chr7:119751006:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2307:45770:20113 | . | NO_LDAS | 0.0039 | GT | 1.7056 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr8--chr7]"] |
| CHFR--AL049872.1 | 1 | 0 | 0.12 | 0.00 | INCL_NON_REF_SPLICE | CHFR^ENSG00000072609.18 | chr12:132841518:- | AL049872.1^ENSG00000259020.3 | chr14:92026611:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2101:12650:25522 | . | NO_LDAS | 0.0005 | GT | 1.9899 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr12--chr14]"] |
| CHD6--PAXBP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CHD6^ENSG00000124177.16 | chr20:41483309:- | PAXBP1^ENSG00000159086.15 | chr21:32751134:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1136:39638:22747 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.4566 | ["INTERCHROMOSOMAL[chr20--chr21]"] |
| CFAP74--LINC01847 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | CFAP74^ENSG00000142609.18 | chr1:1964888:- | LINC01847^ENSG00000253311.3 | chr5:159751124:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1391:39492:14900 | . | NO_LDAS | 0.0019 | GT | 1.6402 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr1--chr5]"] |
| CEP20--AC087280.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CEP20^ENSG00000133393.13 | chr16:15884008:- | AC087280.2^ENSG00000283415.2 | chr11:6823763:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1167:45552:11299 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr16--chr11]"] |
| CELSR2--PARD6G | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CELSR2^ENSG00000143126.8 | chr1:109271296:+ | PARD6G^ENSG00000178184.16 | chr18:80247494:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1182:3759:4573 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr1--chr18]"] |
| CELF4--AC008013.1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CELF4^ENSG00000101489.20 | chr18:37253767:- | AC008013.1^ENSG00000226472.8 | chr12:30988586:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1132:11404:13863 | . | NO_LDAS | 0.0039 | GT | 1.8062 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr18--chr12]"] |
| CELF1--FRMD3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CELF1^ENSG00000149187.18 | chr11:47475336:- | FRMD3^ENSG00000172159.16 | chr9:83298776:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1488:25852:13583 | . | NO_LDAS | 0.0039 | GT | 1.4295 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr11--chr9]"] |
| CDKN1C--TTLL11 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CDKN1C^ENSG00000129757.14 | chr11:2884974:- | TTLL11^ENSG00000175764.15 | chr9:122092965:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2411:19607:3606 | . | NO_LDAS | 0.0039 | GT | 1.4295 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr11--chr9]"] |
| CDKN1A--ADAMTS9 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CDKN1A^ENSG00000124762.14 | chr6:36678798:+ | ADAMTS9^ENSG00000163638.13 | chr3:64658791:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2394:22293:25381 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr6--chr3]"] |
| CDK18--NOC4L | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CDK18^ENSG00000117266.16 | chr1:205504878:+ | NOC4L^ENSG00000184967.7 | chr12:132150981:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1147:46806:27651 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr1--chr12]"] |
| CDK16--ERMAP | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CDK16^ENSG00000102225.16 | chrX:47223675:+ | ERMAP^ENSG00000164010.15 | chr1:42842517:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1180:23442:1112 | . | NO_LDAS | 0.0039 | GC | 1.3383 | AG | 1.8892 | ["INTERCHROMOSOMAL[chrX--chr1]"] |
| CDIN1--RACK1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CDIN1^ENSG00000186073.14 | chr15:36746951:+ | RACK1^ENSG00000204628.12 | chr5:181241639:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1343:7051:3606 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.5656 | ["INTERCHROMOSOMAL[chr15--chr5]"] |
| CDC34--TNKS1BP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CDC34^ENSG00000099804.9 | chr19:536360:+ | TNKS1BP1^ENSG00000149115.14 | chr11:57320683:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1391:34792:17184 | . | NO_LDAS | 0.0039 | GT | 1.4256 | AG | 1.3710 | ["INTERCHROMOSOMAL[chr19--chr11]"] |
| CD93--LRRC32 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CD93^ENSG00000125810.10 | chr20:23085251:- | LRRC32^ENSG00000137507.11 | chr11:76659760:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2401:51554:10458 | . | NO_LDAS | 0.0039 | GC | 1.6729 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr20--chr11]"] |
| CD83--AL009177.1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CD83^ENSG00000112149.10 | chr6:14118065:+ | AL009177.1^ENSG00000286277.1 | chr6:14498057:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1123:37122:14270 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8295 | ["INTRACHROMOSOMAL[chr6:0.29Mb]"] |
| CD81--CCDC130 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CD81^ENSG00000110651.12 | chr11:2377541:+ | CCDC130^ENSG00000104957.14 | chr19:13762850:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2303:43853:24499 | . | NO_LDAS | 0.0039 | GC | 0.9183 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr11--chr19]"] |
| CD47--H2AZ2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CD47^ENSG00000196776.17 | chr3:108090987:- | H2AZ2^ENSG00000105968.19 | chr7:44848043:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1132:22746:5456 | . | NO_LDAS | 0.0039 | GT | 1.2310 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr3--chr7]"] |
| CD164L2--GHSR | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CD164L2^ENSG00000174950.11 | chr1:27382328:- | GHSR^ENSG00000121853.4 | chr3:172448194:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1113:7852:15026 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr1--chr3]"] |
| CCN2--AC073611.1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CCN2^ENSG00000118523.6 | chr6:131951164:- | AC073611.1^ENSG00000288663.1 | chr12:53299510:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1283:50737:3887 | . | NO_LDAS | 0.0039 | GC | 1.6402 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr6--chr12]"] |
| CCDC88B--AC005329.3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CCDC88B^ENSG00000168071.22 | chr11:64343615:+ | AC005329.3^ENSG00000280486.2 | chr19:1387105:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1178:6404:27231 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr11--chr19]"] |
| CCDC85C--GPI | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CCDC85C^ENSG00000205476.9 | chr14:99510624:- | GPI^ENSG00000105220.17 | chr19:34366783:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1198:36628:15068 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr14--chr19]"] |
| CCDC6--CIART | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CCDC6^ENSG00000108091.11 | chr10:59906118:- | CIART^ENSG00000159208.16 | chr1:150282594:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2171:37518:16329 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr10--chr1]"] |
| CCDC117--ITGB4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CCDC117^ENSG00000159873.10 | chr22:28773370:+ | ITGB4^ENSG00000132470.14 | chr17:75733662:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1350:38732:25746 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr22--chr17]"] |
| CBX8--RBM25 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CBX8^ENSG00000141570.11 | chr17:79795264:- | RBM25^ENSG00000119707.14 | chr14:73105901:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2269:41393:14942 | . | NO_LDAS | 0.0039 | GT | 1.3383 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr17--chr14]"] |
| CASTOR2--FAM157B | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CASTOR2^ENSG00000274070.2 | chr7:74965098:+ | FAM157B^ENSG00000233013.10 | chr9:138243620:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1415:6347:25171 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr7--chr9]"] |
| CAST--CCDC7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CAST^ENSG00000153113.24 | chr5:96712357:+ | CCDC7^ENSG00000216937.13 | chr10:32472481:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1327:6671:10262 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr5--chr10]"] |
| CAPRIN1--TBC1D4 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | CAPRIN1^ENSG00000135387.21 | chr11:34090678:+ | TBC1D4^ENSG00000136111.14 | chr13:75309951:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1108:46603:6171 | . | NO_LDAS | 0.0013 | GT | 1.8323 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr11--chr13]"] |
| CAPRIN1--AC026341.3 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | CAPRIN1^ENSG00000135387.21 | chr11:34090678:+ | AC026341.3^ENSG00000288074.1 | chr3:115438144:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1108:46603:6171 | . | NO_LDAS | 0.0013 | GT | 1.8323 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr11--chr3]"] |
| CAPN1--ZFHX2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CAPN1^ENSG00000014216.16 | chr11:65206002:+ | ZFHX2^ENSG00000136367.14 | chr14:23527687:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2142:48796:29585 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.5058 | ["INTERCHROMOSOMAL[chr11--chr14]"] |
| CAMSAP2--MFSD14A | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | CAMSAP2^ENSG00000118200.14 | chr1:200761098:+ | MFSD14A^ENSG00000156875.14 | chr1:100049909:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1131:51465:29641 | . | YES_LDAS | 0.0039 | GT | 1.7968 | AG | 1.9656 | ["INTRACHROMOSOMAL[chr1:100.66Mb]"] |
| CA14--NARF | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | CA14^ENSG00000118298.12 | chr1:150258078:+ | NARF^ENSG00000141562.18 | chr17:82478800:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2395:28813:5680 | . | NO_LDAS | 0.0039 | GT | 1.7056 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| C4orf19--B3GNTL1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | C4orf19^ENSG00000154274.15 | chr4:37454028:+ | B3GNTL1^ENSG00000175711.8 | chr17:82960393:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1116:46255:11173 | . | NO_LDAS | 0.0039 | GT | 0.9183 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr4--chr17]"] |
| C3--EXOC5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | C3^ENSG00000125730.17 | chr19:6680158:- | EXOC5^ENSG00000070367.16 | chr14:57205036:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1434:42000:4979 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr19--chr14]"] |
| C19orf71--HACD3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | C19orf71^ENSG00000183397.5 | chr19:3539260:+ | HACD3^ENSG00000074696.13 | chr15:65535721:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1131:51571:2695 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr19--chr15]"] |
| BTG3--C14orf28 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | BTG3^ENSG00000154640.15 | chr21:17612699:- | C14orf28^ENSG00000179476.8 | chr14:44897514:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1198:19647:16091 | . | NO_LDAS | 0.001 | GT | 1.2310 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr21--chr14]"] |
| BSPRY--SAMD15 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | BSPRY^ENSG00000119411.11 | chr9:113360549:+ | SAMD15^ENSG00000100583.4 | chr14:77378232:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2457:13863:4643 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr9--chr14]"] |
| BPIFA2--ST13P15 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | BPIFA2^ENSG00000131050.11 | chr20:33174178:+ | ST13P15^ENSG00000243759.1 | chr3:143517382:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2260:3759:20603 | . | NO_LDAS | 0.001 | GT | 1.9656 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr20--chr3]"] |
| BORCS8--COPA | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | BORCS8^ENSG00000254901.8 | chr19:19180686:- | COPA^ENSG00000122218.16 | chr1:160291496:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1166:21274:15012 | . | YES_LDAS | 0.0039 | GT | 1.5546 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr19--chr1]"] |
| BCORL1--ARF1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | BCORL1^ENSG00000085185.16 | chrX:130016213:+ | ARF1^ENSG00000143761.16 | chr1:228098091:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2379:47097:7530 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.9656 | ["INTERCHROMOSOMAL[chrX--chr1]"] |
| BANP--MEIS2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | BANP^ENSG00000172530.20 | chr16:87950646:+ | MEIS2^ENSG00000134138.20 | chr15:37098020:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1129:10271:11537 | . | YES_LDAS | 0.0039 | GC | 1.9086 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr16--chr15]"] |
| BAIAP2--STAT6 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | BAIAP2^ENSG00000175866.15 | chr17:81100040:+ | STAT6^ENSG00000166888.12 | chr12:57105317:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1489:32664:5820 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7232 | ["INTERCHROMOSOMAL[chr17--chr12]"] |
| BABAM2--LTBP1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | BABAM2^ENSG00000158019.21 | chr2:28045799:+ | LTBP1^ENSG00000049323.16 | chr2:33273656:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1127:49427:22046 | . | YES_LDAS | 0.0039 | GT | 1.8256 | AG | 1.6402 | ["INTRACHROMOSOMAL[chr2:4.61Mb]"] |
| ATP9B--HHAT | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ATP9B^ENSG00000166377.20 | chr18:79374034:+ | HHAT^ENSG00000054392.13 | chr1:210404506:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1148:4301:5596 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr18--chr1]"] |
| ATP5PD--EWSAT1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ATP5PD^ENSG00000167863.12 | chr17:75040088:- | EWSAT1^ENSG00000212766.9 | chr15:69094827:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1341:5992:9197 | . | NO_LDAS | 0.0039 | GT | 1.2419 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr17--chr15]"] |
| ATP13A1--LRRC32 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ATP13A1^ENSG00000105726.17 | chr19:19647599:- | LRRC32^ENSG00000137507.11 | chr11:76660023:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1413:29194:10262 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr19--chr11]"] |
| ATP11B--AL450326.2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ATP11B^ENSG00000058063.16 | chr3:182880981:+ | AL450326.2^ENSG00000236114.1 | chr10:43523876:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2350:4899:9351 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr3--chr10]"] |
| ATG16L2--PLPP5 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ATG16L2^ENSG00000168010.11 | chr11:72817855:+ | PLPP5^ENSG00000147535.17 | chr8:38266311:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1118:33773:20827 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr11--chr8]"] |
| ATG13--SARS1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ATG13^ENSG00000175224.16 | chr11:46630100:+ | SARS1^ENSG00000031698.13 | chr1:109223982:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1325:50842:3284 | . | YES_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr11--chr1]"] |
| ATF2--SIN3B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ATF2^ENSG00000115966.17 | chr2:175114692:- | SIN3B^ENSG00000127511.10 | chr19:16880114:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1439:12900:20631 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr2--chr19]"] |
| ASAP2--C14orf28 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | ASAP2^ENSG00000151693.11 | chr2:9207018:+ | C14orf28^ENSG00000179476.8 | chr14:44897514:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1198:19647:16091 | . | NO_LDAS | 0.001 | GT | 1.2310 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr2--chr14]"] |
| ARRB1--PPP1R9B | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ARRB1^ENSG00000137486.17 | chr11:75265261:- | PPP1R9B^ENSG00000108819.11 | chr17:50139491:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2129:16274:9828 | . | NO_LDAS | 0.0039 | GT | 1.1589 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr11--chr17]"] |
| ARRB1--BCL2L2-PABPN1 | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | ARRB1^ENSG00000137486.17 | chr11:75265261:- | BCL2L2-PABPN1^ENSG00000258643.6 | chr14:23322250:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1151:4778:26881 | . | NO_LDAS | 0.0013 | GT | 1.1589 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr11--chr14]"] |
| ARMC4--CHTF8 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ARMC4^ENSG00000169126.16 | chr10:27853242:- | CHTF8^ENSG00000168802.14 | chr16:69121493:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1119:32891:29025 | . | NO_LDAS | 0.0039 | GC | 1.9329 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr10--chr16]"] |
| ARL8B--LRIG1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ARL8B^ENSG00000134108.14 | chr3:5122588:+ | LRIG1^ENSG00000144749.14 | chr3:66462509:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2145:32147:28520 | . | YES_LDAS | 0.0039 | GT | 1.9899 | AG | 1.8295 | ["INTRACHROMOSOMAL[chr3:61.20Mb]"] |
| ARHGEF3--FLNB | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ARHGEF3^ENSG00000163947.12 | chr3:57035088:- | FLNB^ENSG00000136068.15 | chr3:58077046:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2409:45988:29039 | . | YES_LDAS | 0.0039 | GT | 1.1589 | AG | 1.9219 | ["INTRACHROMOSOMAL[chr3:0.93Mb]"] |
| ARHGAP8--MTSS2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ARHGAP8^ENSG00000241484.10 | chr22:44825593:+ | MTSS2^ENSG00000132613.15 | chr16:70685820:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1491:51360:21332 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr22--chr16]"] |
| ARHGAP29--XRN2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ARHGAP29^ENSG00000137962.13 | chr1:94209296:- | XRN2^ENSG00000088930.8 | chr20:21303431:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1179:38214:4391 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr1--chr20]"] |
| ARHGAP26--NDFIP1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ARHGAP26^ENSG00000145819.18 | chr5:142932125:+ | NDFIP1^ENSG00000131507.11 | chr5:142131808:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2105:36564:23840 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr5:0.62Mb]"] |
| ARGLU1--RFX3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ARGLU1^ENSG00000134884.15 | chr13:106559432:- | RFX3^ENSG00000080298.15 | chr9:3330517:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2450:30973:11215 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.6895 | ["INTERCHROMOSOMAL[chr13--chr9]"] |
| ARFGEF3--SCML2 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ARFGEF3^ENSG00000112379.9 | chr6:138253984:+ | SCML2^ENSG00000102098.19 | chrX:18260291:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1453:7318:25788 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr6--chrX]"] |
| ARFGEF1--PCM1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ARFGEF1^ENSG00000066777.9 | chr8:67343164:- | PCM1^ENSG00000078674.18 | chr8:17960014:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2284:15441:27834 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr8:49.15Mb]"] |
| APLP2--CERS3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | APLP2^ENSG00000084234.18 | chr11:130121799:+ | CERS3^ENSG00000154227.14 | chr15:100402823:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1284:49127:6535 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 0.9968 | ["INTERCHROMOSOMAL[chr11--chr15]"] |
| AP001033.1--TMEM94 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AP001033.1^ENSG00000264964.2 | chr18:9310978:- | TMEM94^ENSG00000177728.17 | chr17:75490099:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1115:33489:26306 | . | YES_LDAS | 0.0039 | AT | 0.9056 | AC | 1.2867 | ["INTERCHROMOSOMAL[chr18--chr17]"] |
| ANXA7--SMG1P1 | 1 | 0 | 0.33 | 0.00 | ONLY_REF_SPLICE | ANXA7^ENSG00000138279.16 | chr10:73377445:- | SMG1P1^ENSG00000237296.9 | chr16:22451620:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2257:15392:11075 | . | YES_LDAS | 0.0013 | GT | 1.9329 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr10--chr16]"] |
| ANXA7--LINC02574 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ANXA7^ENSG00000138279.16 | chr10:73400803:- | LINC02574^ENSG00000233975.2 | chr1:27662180:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1242:32931:1042 | . | NO_LDAS | 0.0039 | GT | 1.8323 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr10--chr1]"] |
| ANP32B--HMGB1P48 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ANP32B^ENSG00000136938.9 | chr9:98005153:+ | HMGB1P48^ENSG00000234379.1 | chr1:45532093:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2188:42000:21038 | . | NO_LDAS | 0.0039 | GT | 1.2729 | AG | 1.2867 | ["INTERCHROMOSOMAL[chr9--chr1]"] |
| ANKS3--BRAF | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ANKS3^ENSG00000168096.15 | chr16:4729592:- | BRAF^ENSG00000157764.14 | chr7:140808995:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2329:15538:15951 | . | YES_LDAS | 0.0039 | GT | 1.8295 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr16--chr7]"] |
| ANKRD30A--ATOH7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ANKRD30A^ENSG00000148513.18 | chr10:37125731:+ | ATOH7^ENSG00000179774.9 | chr10:68231657:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2237:35601:21444 | . | NO_LDAS | 0.0039 | GT | 0.9056 | AG | 0.9968 | ["INTRACHROMOSOMAL[chr10:30.85Mb]"] |
| ANKRD24--RPL13P12 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ANKRD24^ENSG00000089847.12 | chr19:4218094:+ | RPL13P12^ENSG00000215030.5 | chr17:17383667:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2114:51134:2303 | . | NO_LDAS | 0.0019 | GC | 1.9086 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr19--chr17]"] |
| ANGPTL2--ZNF761 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ANGPTL2^ENSG00000136859.10 | chr9:127107915:- | ZNF761^ENSG00000160336.16 | chr19:53445001:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2345:2391:28884 | . | YES_LDAS | 0.0039 | GT | 1.7819 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr9--chr19]"] |
| ANAPC7--ARPC3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ANAPC7^ENSG00000196510.13 | chr12:110403527:- | ARPC3^ENSG00000111229.16 | chr12:110435217:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1166:35188:27007 | . | YES_LDAS | 0.0039 | GT | 1.7968 | AG | 1.6895 | ["DEEPEST2019","INTRACHROMOSOMAL[chr12:0.03Mb]","LOCAL_REARRANGEMENT:-:[31093]"] |
| ANAPC16--RPS24 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ANAPC16^ENSG00000166295.9 | chr10:72233693:+ | RPS24^ENSG00000138326.21 | chr10:78040204:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1289:7391:17226 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr10:5.80Mb]"] |
| ALPK3--COPE | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ALPK3^ENSG00000136383.7 | chr15:84864525:+ | COPE^ENSG00000105669.14 | chr19:18899947:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1244:29906:4293 | . | NO_LDAS | 0.0039 | GT | 1.7819 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr15--chr19]"] |
| ALDOC--ASIC3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ALDOC^ENSG00000109107.14 | chr17:28575479:- | ASIC3^ENSG00000213199.8 | chr7:151051861:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1237:18790:3116 | . | NO_LDAS | 0.0039 | AT | 1.9329 | AC | 1.7056 | ["INTERCHROMOSOMAL[chr17--chr7]"] |
| ALDH1A1--SBDS | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ALDH1A1^ENSG00000165092.13 | chr9:72940148:- | SBDS^ENSG00000126524.10 | chr7:66988468:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1451:7512:16371 | . | NO_LDAS | 0.0039 | GT | 1.2729 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr9--chr7]"] |
| ALAD--NRDE2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ALAD^ENSG00000148218.16 | chr9:113387069:- | NRDE2^ENSG00000119720.18 | chr14:90276862:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1147:12787:10542 | . | YES_LDAS | 0.0039 | GT | 1.8062 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr9--chr14]"] |
| AL772363.1--TCF3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL772363.1^ENSG00000203987.3 | chr9:137875621:- | TCF3^ENSG00000071564.17 | chr19:1619234:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1293:2934:15587 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr9--chr19]"] |
| AL445250.1--NOSIP | 1 | 0 | 0.50 | 0.00 | ONLY_REF_SPLICE | AL445250.1^ENSG00000225096.3 | chr6:57961742:+ | NOSIP^ENSG00000142546.14 | chr19:49560692:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1224:36847:6283 | . | YES_LDAS | 0.0019 | GT | 1.9329 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr6--chr19]"] |
| AL359265.2--RPL13P12 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AL359265.2^ENSG00000232463.1 | chr1:176231293:- | RPL13P12^ENSG00000215030.5 | chr17:17383470:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2189:43456:20365 | . | NO_LDAS | 0.0019 | GC | 1.9086 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| AL356489.3--CYTH2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL356489.3^ENSG00000287063.1 | chr9:33707036:+ | CYTH2^ENSG00000105443.15 | chr19:48470478:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2298:30173:29697 | . | NO_LDAS | 0.0039 | GT | 1.5546 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr9--chr19]"] |
| AL355916.1--EBF4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL355916.1^ENSG00000232774.8 | chr14:61654186:+ | EBF4^ENSG00000088881.21 | chr20:2755813:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1188:2335:26741 | . | NO_LDAS | 0.0039 | GT | 1.3753 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr14--chr20]"] |
| AL161757.5--PHC3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AL161757.5^ENSG00000259133.5 | chr14:56725890:- | PHC3^ENSG00000173889.16 | chr3:170145521:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1253:8419:6899 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr14--chr3]"] |
| AL160391.1--PGGHG | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL160391.1^ENSG00000288330.1 | chr13:70139382:- | PGGHG^ENSG00000142102.16 | chr11:291447:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2108:35876:22509 | . | NO_LDAS | 0.0039 | GT | 1.8256 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr13--chr11]"] |
| AL160236.1--HMGN2P31 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL160236.1^ENSG00000258656.1 | chr14:60972314:- | HMGN2P31^ENSG00000214195.4 | chr9:5311607:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2356:30197:18641 | . | YES_LDAS | 0.0039 | GT | 0.9968 | AG | 0.9710 | ["INTERCHROMOSOMAL[chr14--chr9]"] |
| AL139383.1--STARD13 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AL139383.1^ENSG00000230490.3 | chr13:33439691:- | STARD13^ENSG00000133121.21 | chr13:33167622:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2220:10384:24401 | . | YES_LDAS | 0.0039 | GT | 1.6895 | AG | 1.6402 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.00Mb]","NEIGHBORS[4576]"] |
| AL139094.1--TMC4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AL139094.1^ENSG00000220685.3 | chr6:5066922:- | TMC4^ENSG00000167608.12 | chr19:54171991:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1313:37615:9828 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.2310 | ["INTERCHROMOSOMAL[chr6--chr19]"] |
| AL033384.1--MLIP | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AL033384.1^ENSG00000236740.6 | chr6:53930277:+ | MLIP^ENSG00000146147.15 | chr6:54121447:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1131:4843:28030 | . | NO_LDAS | 0.0039 | GT | 1.9086 | AG | 1.5219 | ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.02Mb]","NEIGHBORS[21249]"] |
| AIFM1--PDE6A | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AIFM1^ENSG00000156709.15 | chrX:130136041:- | PDE6A^ENSG00000132915.11 | chr5:149867226:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1295:4835:4111 | . | NO_LDAS | 0.0019 | GT | 1.9329 | AG | 1.8256 | ["INTERCHROMOSOMAL[chrX--chr5]"] |
| AHSA2P--UBTF | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AHSA2P^ENSG00000173209.23 | chr2:61178192:+ | UBTF^ENSG00000108312.15 | chr17:44218290:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2425:22827:15825 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr2--chr17]"] |
| AHCY--SLCO2B1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AHCY^ENSG00000101444.13 | chr20:34294081:- | SLCO2B1^ENSG00000137491.15 | chr11:75202061:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1164:24000:13065 | . | NO_LDAS | 0.0039 | GT | 1.8892 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr20--chr11]"] |
| ADRA2C--GMPPB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ADRA2C^ENSG00000184160.8 | chr4:3766822:+ | GMPPB^ENSG00000173540.14 | chr3:49722147:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2169:24558:4895 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr4--chr3]"] |
| ADPRS--PAGE4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ADPRS^ENSG00000116863.11 | chr1:36092098:+ | PAGE4^ENSG00000101951.17 | chrX:49831093:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2231:11549:6269 | . | NO_LDAS | 0.0039 | GT | 1.7968 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr1--chrX]"] |
| ADGRL4--WWC1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ADGRL4^ENSG00000162618.15 | chr1:79006777:- | WWC1^ENSG00000113645.15 | chr5:168464711:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1330:5587:23209 | . | NO_LDAS | 0.0039 | GC | 1.7465 | AG | 1.2366 | ["INTERCHROMOSOMAL[chr1--chr5]"] |
| ADD1--PRICKLE1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | ADD1^ENSG00000087274.17 | chr4:2915012:+ | PRICKLE1^ENSG00000139174.12 | chr12:42460639:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1415:18677:12112 | . | NO_LDAS | 0.0019 | GT | 1.7465 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr4--chr12]"] |
| ADAP1--AC091564.3 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ADAP1^ENSG00000105963.15 | chr7:901096:- | AC091564.3^ENSG00000254641.1 | chr11:6608783:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1133:26532:25830 | . | NO_LDAS | 0.0039 | GT | 1.6402 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr7--chr11]"] |
| ADAMTSL4--LDLRAD4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ADAMTSL4^ENSG00000143382.16 | chr1:150559548:+ | LDLRAD4^ENSG00000168675.19 | chr18:13651271:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1233:14624:23364 | . | NO_LDAS | 0.0039 | GT | 1.7232 | AG | 1.3996 | ["INTERCHROMOSOMAL[chr1--chr18]"] |
| AD000864.1--PILRB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AD000864.1^ENSG00000280194.1 | chr19:35902969:- | PILRB^ENSG00000121716.20 | chr7:100367349:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1288:51328:15194 | . | NO_LDAS | 0.0039 | GT | 1.4295 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr19--chr7]"] |
| ACTN4--ZBED4 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ACTN4^ENSG00000130402.13 | chr19:38647907:+ | ZBED4^ENSG00000100426.7 | chr22:49883334:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1165:25424:4489 | . | YES_LDAS | 0.0039 | GT | 1.5656 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr19--chr22]"] |
| ACTG1--ARHGEF34P | 1 | 0 | 0.33 | 0.00 | INCL_NON_REF_SPLICE | ACTG1^ENSG00000184009.13 | chr17:81512806:- | ARHGEF34P^ENSG00000204959.4 | chr7:144286033:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1236:45568:24415 | . | NO_LDAS | 0.0013 | GT | 1.1589 | AG | 1.7968 | ["INTERCHROMOSOMAL[chr17--chr7]"] |
| ACTA2--ACTG1 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ACTA2^ENSG00000107796.13 | chr10:88938061:- | ACTG1^ENSG00000184009.13 | chr17:81510833:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1333:21994:4573 | . | YES_LDAS | 0.0039 | GT | 1.8295 | AG | 1.6402 | ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr10--chr17]"] |
| ACIN1--KLK1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ACIN1^ENSG00000100813.14 | chr14:23061524:- | KLK1^ENSG00000167748.11 | chr19:50822066:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1249:27932:21976 | . | NO_LDAS | 0.0039 | GT | 0.9056 | AG | 1.5628 | ["INTERCHROMOSOMAL[chr14--chr19]"] |
| ACADVL--SIRT5 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ACADVL^ENSG00000072778.20 | chr17:7223730:+ | SIRT5^ENSG00000124523.17 | chr6:13574674:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1290:20149:1406 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.7056 | ["INTERCHROMOSOMAL[chr17--chr6]"] |
| AC245100.7--SEC22B3P | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC245100.7^ENSG00000285062.1 | chr1:148459602:- | SEC22B3P^ENSG00000275140.1 | chr1:148784591:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1119:18992:6213 | . | YES_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8256 | ["INTRACHROMOSOMAL[chr1:0.31Mb]"] |
| AC242842.1--PITPNC1 | 1 | 0 | 0.33 | 0.00 | ONLY_REF_SPLICE | AC242842.1^ENSG00000275557.1 | chr1:149611848:+ | PITPNC1^ENSG00000154217.15 | chr17:67532802:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2269:37842:6745 | . | NO_LDAS | 0.0013 | GT | 1.9656 | AG | 1.8295 | ["INTERCHROMOSOMAL[chr1--chr17]"] |
| AC211476.6--GSTK1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC211476.6^ENSG00000285886.1 | chr7:72954902:+ | GSTK1^ENSG00000197448.14 | chr7:143268791:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1279:34703:16470 | . | NO_LDAS | 0.0039 | GT | 1.6895 | AG | 1.7968 | ["INTRACHROMOSOMAL[chr7:70.29Mb]"] |
| AC211476.4--DTX2 | 1 | 0 | 0.09 | 0.00 | ONLY_REF_SPLICE | AC211476.4^ENSG00000277125.1 | chr7:73069531:+ | DTX2^ENSG00000091073.19 | chr7:76463545:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2390:32680:22523 | . | YES_LDAS | 0.0003 | GT | 1.4566 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr7:3.38Mb]"] |
| AC138969.1--SRCAP | 1 | 0 | 0.14 | 0.00 | ONLY_REF_SPLICE | AC138969.1^ENSG00000183889.12 | chr16:16331980:+ | SRCAP^ENSG00000080603.17 | chr16:30728966:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2219:50381:21906 | . | YES_LDAS | 0.0005 | GT | 1.9329 | AG | 1.9329 | ["INTRACHROMOSOMAL[chr16:14.35Mb]"] |
| AC138409.2--NAIP | 1 | 0 | 0.06 | 0.00 | ONLY_REF_SPLICE | AC138409.2^ENSG00000215158.9 | chr5:34175822:- | NAIP^ENSG00000249437.8 | chr5:71003857:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2383:42469:14452 | . | YES_LDAS | 0.0002 | GT | 1.9329 | AG | 1.8295 | ["INTRACHROMOSOMAL[chr5:36.72Mb]"] |
| AC134407.3--FBXO9 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC134407.3^ENSG00000279880.1 | chr17:67975807:+ | FBXO9^ENSG00000112146.17 | chr6:53100325:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2192:32664:1224 | . | NO_LDAS | 0.0039 | AT | 1.7968 | AC | 1.8295 | ["INTERCHROMOSOMAL[chr17--chr6]"] |
| AC116345.4--UXT | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC116345.4^ENSG00000287090.1 | chr5:73195972:- | UXT^ENSG00000126756.12 | chrX:47657285:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1247:39913:29473 | . | NO_LDAS | 0.0039 | GT | 1.9899 | AG | 1.8256 | ["INTERCHROMOSOMAL[chr5--chrX]"] |
| AC106791.1--GAPVD1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC106791.1^ENSG00000250159.7 | chr5:137811177:- | GAPVD1^ENSG00000165219.22 | chr9:125298890:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1486:4956:19566 | . | YES_LDAS | 0.0039 | GT | 1.8256 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr5--chr9]"] |
| AC104162.1--THOC7 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AC104162.1^ENSG00000224479.6 | chr3:63826824:- | THOC7^ENSG00000163634.12 | chr3:63839773:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1207:21265:18726 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.8892 | ["INTRACHROMOSOMAL[chr3:0.01Mb]","LOCAL_REARRANGEMENT:-:[6425]"] |
| AC103564.1--SRSF2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC103564.1^ENSG00000229203.1 | chr2:131829909:- | SRSF2^ENSG00000161547.17 | chr17:76736804:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1388:34371:3004 | . | NO_LDAS | 0.0039 | GT | 1.4716 | AG | 1.8062 | ["INTERCHROMOSOMAL[chr2--chr17]"] |
| AC097500.1--LINC01473 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC097500.1^ENSG00000287129.1 | chr2:185950644:- | LINC01473^ENSG00000237877.7 | chr2:186086370:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1420:15999:12770 | . | YES_LDAS | 0.0039 | GT | 1.9899 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr2:0.08Mb]","LOCAL_REARRANGEMENT:-:[79713]"] |
| AC092865.4--AC079804.3 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AC092865.4^ENSG00000284687.1 | chr12:8390270:- | AC079804.3^ENSG00000287860.1 | chr7:6987410:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1106:1906:4307 | . | YES_LDAS | 0.0039 | GT | 1.4566 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr12--chr7]"] |
| AC092745.5--STARD13 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AC092745.5^ENSG00000286895.1 | chr12:8251507:+ | STARD13^ENSG00000133121.21 | chr13:33167622:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1240:22439:27960 | . | YES_LDAS | 0.0039 | GT | 1.5329 | AG | 1.6402 | ["INTERCHROMOSOMAL[chr12--chr13]"] |
| AC090403.1--RN7SL515P | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AC090403.1^ENSG00000264151.6 | chr18:27392780:- | RN7SL515P^ENSG00000241406.3 | chr13:41807912:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1241:39872:26825 | . | NO_LDAS | 0.0019 | GT | 1.5058 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr18--chr13]"] |
| AC084851.2--DDX23 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC084851.2^ENSG00000255452.1 | chr11:49092468:+ | DDX23^ENSG00000174243.10 | chr12:48837654:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1196:37656:1266 | . | NO_LDAS | 0.0039 | GT | 1.4566 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr11--chr12]"] |
| AC073476.2--SZT2 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC073476.2^ENSG00000261096.1 | chr2:231810826:+ | SZT2^ENSG00000198198.17 | chr1:43432517:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2440:42583:3634 | . | NO_LDAS | 0.0039 | GT | 1.3996 | AG | 1.7465 | ["INTERCHROMOSOMAL[chr2--chr1]"] |
| AC034236.1--PLA2R1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AC034236.1^ENSG00000185641.6 | chr5:116052187:- | PLA2R1^ENSG00000153246.13 | chr2:160016709:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:1441:29728:21668 | . | NO_LDAS | 0.0019 | GT | 1.3383 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr5--chr2]"] |
| AC034102.6--ARFGEF1 | 1 | 0 | 0.14 | 0.00 | INCL_NON_REF_SPLICE | AC034102.6^ENSG00000258317.1 | chr12:56129241:- | ARFGEF1^ENSG00000066777.9 | chr8:67343233:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1216:31645:15405 | . | NO_LDAS | 0.0005 | GT | 1.8295 | AG | 1.9656 | ["INTERCHROMOSOMAL[chr12--chr8]"] |
| AC021078.1--AL354751.1 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | AC021078.1^ENSG00000230551.4 | chr5:149496830:- | AL354751.1^ENSG00000234537.1 | chr9:92137375:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1140:50454:9337 | . | NO_LDAS | 0.0008 | GC | 1.5329 | AG | 1.5850 | ["INTERCHROMOSOMAL[chr5--chr9]"] |
| AC020741.1--ADGRA1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AC020741.1^ENSG00000205682.2 | chr4:61428174:- | ADGRA1^ENSG00000197177.15 | chr10:133129189:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1412:6129:19328 | . | NO_LDAS | 0.0019 | GT | 1.7819 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr4--chr10]"] |
| AC020741.1--AC010491.2 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AC020741.1^ENSG00000205682.2 | chr4:61428174:- | AC010491.2^ENSG00000286970.1 | chr5:14732965:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1412:6129:19328 | . | NO_LDAS | 0.0019 | GT | 1.7819 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr4--chr5]"] |
| AC016907.2--ALK | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | AC016907.2^ENSG00000233862.7 | chr2:30119768:- | ALK^ENSG00000171094.18 | chr2:29717697:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1178:4228:7964 | . | YES_LDAS | 0.0039 | GT | 1.8062 | AG | 1.9329 | ["CCLE_StarF2019","INTRACHROMOSOMAL[chr2:0.13Mb]"] |
| AC015712.1--HMCN1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC015712.1^ENSG00000232386.9 | chr15:100850332:+ | HMCN1^ENSG00000143341.12 | chr1:185734841:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2414:4932:6269 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.9329 | ["INTERCHROMOSOMAL[chr15--chr1]"] |
| AC009950.1--PILRB | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC009950.1^ENSG00000225963.8 | chr2:230121756:+ | PILRB^ENSG00000121716.20 | chr7:100358242:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2114:5304:4895 | . | NO_LDAS | 0.0039 | GT | 1.5058 | AG | 1.3710 | ["INTERCHROMOSOMAL[chr2--chr7]"] |
| AC009237.3--OR7E102P | 1 | 0 | 0.06 | 0.00 | INCL_NON_REF_SPLICE | AC009237.3^ENSG00000229689.3 | chr2:95527233:+ | OR7E102P^ENSG00000168992.4 | chr2:95546574:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:7:2436:27357:21430 | . | NO_LDAS | 0.0002 | GT | 1.7968 | AG | 1.9086 | ["INTRACHROMOSOMAL[chr2:0.01Mb]","NEIGHBORS[14126]"] |
| AC008691.1--ATP6V0A4 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC008691.1^ENSG00000249738.10 | chr5:159424182:+ | ATP6V0A4^ENSG00000105929.16 | chr7:138768874:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:2128:44403:12868 | . | NO_LDAS | 0.0039 | GT | 1.9329 | AG | 1.9086 | ["INTERCHROMOSOMAL[chr5--chr7]"] |
| AC008038.1--CACNB3 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | AC008038.1^ENSG00000283041.1 | chr7:133035453:- | CACNB3^ENSG00000167535.8 | chr12:48824696:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1247:18741:21108 | . | NO_LDAS | 0.001 | GT | 1.8295 | AG | 1.9899 | ["INTERCHROMOSOMAL[chr7--chr12]"] |
| AC008038.1--AC073587.1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | AC008038.1^ENSG00000283041.1 | chr7:133035453:- | AC073587.1^ENSG00000234522.1 | chr10:120439353:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1247:18741:21108 | . | NO_LDAS | 0.001 | GT | 1.8295 | AG | 1.8892 | ["INTERCHROMOSOMAL[chr7--chr10]"] |
| AC004980.3--UPK3BL1 | 1 | 0 | 0.12 | 0.00 | INCL_NON_REF_SPLICE | AC004980.3^ENSG00000230305.2 | chr7:76527852:+ | UPK3BL1^ENSG00000267368.1 | chr7:102640773:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1345:37340:14452 | . | YES_LDAS | 0.0005 | GT | 1.9086 | AG | 1.7465 | ["INTRACHROMOSOMAL[chr7:26.10Mb]"] |
| AC004980.2--AC004980.1 | 1 | 0 | 0.50 | 0.00 | INCL_NON_REF_SPLICE | AC004980.2^ENSG00000214243.3 | chr7:76650398:- | AC004980.1^ENSG00000205485.13 | chr7:76551420:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1177:6250:7123 | . | YES_LDAS | 0.0019 | GT | 1.9656 | AG | 1.8323 | ["INTRACHROMOSOMAL[chr7:0.02Mb]","LOCAL_INVERSION:-:+:[22419]"] |
| AC004923.1--MSRA | 1 | 0 | 0.07 | 0.00 | ONLY_REF_SPLICE | AC004923.1^ENSG00000254610.3 | chr11:67955482:- | MSRA^ENSG00000175806.15 | chr8:10207833:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2210:16517:7249 | . | YES_LDAS | 0.0003 | GT | 1.4566 | AG | 1.7819 | ["INTERCHROMOSOMAL[chr11--chr8]"] |
| AC004076.1--ZNF772 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | AC004076.1^ENSG00000268163.1 | chr19:57455653:- | ZNF772^ENSG00000197128.12 | chr19:57467085:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1471:28263:2261 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.8062 | ["INTRACHROMOSOMAL[chr19:0.01Mb]","LOCAL_REARRANGEMENT:-:[10424]"] |
| ABR--KRT17P1 | 1 | 0 | 0.25 | 0.00 | INCL_NON_REF_SPLICE | ABR^ENSG00000159842.15 | chr17:1050537:- | KRT17P1^ENSG00000131885.17 | chr17:16842305:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1344:23862:17535 | . | NO_LDAS | 0.001 | GT | 1.8892 | AG | 1.9219 | ["INTRACHROMOSOMAL[chr17:15.61Mb]"] |
| ABR--DDX5 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ABR^ENSG00000159842.15 | chr17:1050050:- | DDX5^ENSG00000108654.16 | chr17:64504842:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:2113:34857:3648 | . | NO_LDAS | 0.0039 | GT | 1.7465 | AG | 1.8256 | ["INTRACHROMOSOMAL[chr17:63.27Mb]"] |
| ABI1--CDH7 | 1 | 0 | 1.00 | 0.00 | ONLY_REF_SPLICE | ABI1^ENSG00000136754.18 | chr10:26823138:- | CDH7^ENSG00000081138.14 | chr18:65803115:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1131:36135:19286 | . | YES_LDAS | 0.0039 | GT | 1.8062 | AG | 1.8323 | ["INTERCHROMOSOMAL[chr10--chr18]"] |
| ABCD3--NDUFS7 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ABCD3^ENSG00000117528.14 | chr1:94418444:+ | NDUFS7^ENSG00000115286.20 | chr19:1395489:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:2303:18458:19608 | . | NO_LDAS | 0.0039 | GT | 0.9183 | AG | 0.9183 | ["INTERCHROMOSOMAL[chr1--chr19]"] |
| ABCB9--RUNX1T1 | 1 | 0 | 0.20 | 0.00 | INCL_NON_REF_SPLICE | ABCB9^ENSG00000150967.18 | chr12:122974617:- | RUNX1T1^ENSG00000079102.16 | chr8:92103176:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1136:24898:9071 | . | NO_LDAS | 0.0008 | GT | 1.2419 | AG | 1.0530 | ["INTERCHROMOSOMAL[chr12--chr8]"] |
| ABCB7--NIBAN1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ABCB7^ENSG00000131269.19 | chrX:75052670:- | NIBAN1^ENSG00000135842.17 | chr1:184793445:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:6:1141:23725:19790 | . | NO_LDAS | 0.0039 | GT | 1.8295 | AG | 1.9329 | ["INTERCHROMOSOMAL[chrX--chr1]"] |
| ABCA2--SVEP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ABCA2^ENSG00000107331.17 | chr9:137024143:- | SVEP1^ENSG00000165124.18 | chr9:110407601:- | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:8:1390:32025:6871 | . | NO_LDAS | 0.0039 | GT | 1.9656 | AG | 1.7819 | ["INTRACHROMOSOMAL[chr9:26.43Mb]"] |
| ABCA2--MRFAP1 | 1 | 0 | 1.00 | 0.00 | INCL_NON_REF_SPLICE | ABCA2^ENSG00000107331.17 | chr9:137022368:- | MRFAP1^ENSG00000179010.15 | chr4:6641093:+ | &ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2@LH00166:238:23LG7FLT4:5:1255:37033:17142 | . | NO_LDAS | 0.0039 | GT | 1.6729 | AG | 1.5546 | ["INTERCHROMOSOMAL[chr9--chr4]"] |
846 rows