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Filename
ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.starfusion.starfusion.fusion_predictions.filter_summary.txt
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/starfusion/ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.starfusion.starfusion.fusion_predictions.filter_summary.txt
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1.0 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 5:50 PM

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STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: ColoN_FFPE_L01_RNA_01_B23LG7FLT4_2.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 845
Pass (CALL=1): 0 (0.0%)
Fail (CALL=0): 845 (100.0%)

Blacklist Flagging:
  Total blacklisted: 112
  All blacklisted fusions have CALL=0

Failure Reasons:
  Excluded SpliceType: INCL_NON_REF_SPLICE: 479
  Read count too low: 1 < 8: 204
  Blacklisted: 49
  aih_curated_blacklist score(3): 36
  Blacklisted; aih_curated_blacklist score(3): 27
  Read count too low: 2 < 8: 24
  Excluded annotation pattern: HGNC_GENEFAM: 19
  Read count too low: 3 < 8: 4
  Excluded annotation pattern: DGD_PARALOGS: 3

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 0 pass, 610 fail (total: 610)
  ONLY_REF_SPLICE: 0 pass, 235 fail (total: 235)