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Filename
NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0008_exp0011/B23LG7FLT4/nfcore_rnafusion__e7be3c7a--20260528-111100/fusioninspector/NCI-H2228_FFPE_RNA_0001_B23LG7FLT4_1.FusionInspector.fusions.abridged.tsv
Size
19.4 KB
Workflow Run
dev_rna_exp0008_exp0011-e7be3c7a_b
Published
May 28, 2026 6:25 PM

Content

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PCDHGB2--PCDHGA10 741 6 92.62 0.75 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA10^ENSG00000253846.2 12051 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 1 748.00 374.00 GT 1.7819 AG 1.3383 0.3163 1890 0
PCDHGB2--PCDHGA11 741 6 92.62 0.75 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA11^ENSG00000253873.6 11222 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4 748.00 149.60 GT 1.7819 AG 1.3383 0.3163 1018 0
PCDHGB2--PCDHGA12 741 6 92.62 0.75 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA12^ENSG00000253159.3 10305 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 748.00 748.00 GT 1.7819 AG 1.3383 0.3163 1413 0
PCDHGB2--PCDHGA8 741 6 92.62 0.75 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA8^ENSG00000253767.3 14069 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 0 748.00 748.00 GT 1.7819 AG 1.3383 0.3163 1419 0
PCDHGB2--PCDHGA9 741 6 92.62 0.75 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGA9^ENSG00000261934.2 10157 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4 748.00 149.60 GT 1.7819 AG 1.3383 0.3163 1493 0
PCDHGB2--PCDHGC3 741 6 92.62 0.75 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC3^ENSG00000240184.7 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 711 748.00 1.05 GT 1.7819 AG 1.3383 0.3163 1210 0
PCDHGB2--PCDHGC4 741 6 92.62 0.75 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC4^ENSG00000242419.5 10382 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 15 748.00 46.75 GT 1.7819 AG 1.3383 0.3163 1585 0
PCDHGB2--PCDHGC5 741 6 92.62 0.75 PCDHGB2^ENSG00000253910.2 3515 chr5:141362556:+ PCDHGC5^ENSG00000240764.4 10438 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 75 748.00 9.84 GT 1.7819 AG 1.3383 0.3163 1206 0
EML4--ALK 626 2 626.00 1.96 EML4^ENSG00000143924.19 8520 chr2:42264951:+ ALK^ENSG00000171094.18 59003 chr2:29223528:- ONLY_REF_SPLICE YES 996 392 0.63 1.60 GT 1.2419 AG 1.9086 2.1272 1008 0
EML4--ALK 414 0 414.00 0.00 EML4^ENSG00000143924.19 8300 chr2:42264731:+ ALK^ENSG00000171094.18 59003 chr2:29223528:- ONLY_REF_SPLICE YES 1030 392 0.40 1.06 GT 1.7819 AG 1.9086 1.4025 1031 0
EML4--ALK 9 2 9.00 0.03 EML4^ENSG00000143924.19 8519 chr2:42264950:+ ALK^ENSG00000171094.18 59001 chr2:29223530:- INCL_NON_REF_SPLICE YES 1001 345 0.01 0.03 GG 1.2419 GC 1.9329 0.0306 1010 0
EML4--ALK 3 2 3.00 0.01 EML4^ENSG00000143924.19 8520 chr2:42264951:+ ALK^ENSG00000171094.18 57853 chr2:29224678:- ONLY_REF_SPLICE YES 996 5 0.01 1.00 GT 1.2419 AG 1.9329 0.0102 2158 0
EML4--ALK 1 0 1.00 0.00 EML4^ENSG00000143924.19 8300 chr2:42264731:+ ALK^ENSG00000171094.18 57853 chr2:29224678:- ONLY_REF_SPLICE YES 1030 5 0.00 0.33 GT 1.7819 AG 1.9329 0.0034 2168 0
STAG3L3--AC090114.3 615 16 615.00 13.88 STAG3L3^ENSG00000174353.17 1230 chr7:73005693:- AC090114.3^ENSG00000280828.1 19364 chr7:128608118:+ ONLY_REF_SPLICE YES 183 513 3.43 1.23 GT 1.9899 AG 1.8892 2.1304 4340 0
STAG3L3--AC090114.3 93 17 93.00 3.12 STAG3L3^ENSG00000174353.17 1347 chr7:73005576:- AC090114.3^ENSG00000280828.1 19364 chr7:128608118:+ ONLY_REF_SPLICE YES 146 513 0.76 0.22 GT 1.9656 AG 1.8892 0.3256 4226 0
STAG3L3--AC090114.3 4 0 4.00 0.00 STAG3L3^ENSG00000174353.17 1230 chr7:73005693:- AC090114.3^ENSG00000280828.1 21553 chr7:128615860:+ ONLY_REF_SPLICE YES 183 342 0.03 0.01 GT 1.9899 AG 1.9656 0.0136 5299 0
PCDHA11--PCDHAC2 580 2 580.00 1.46 PCDHA11^ENSG00000249158.7 3520 chr5:140870702:+ PCDHAC2^ENSG00000243232.6 11430 chr5:140978949:+ INCL_NON_REF_SPLICE YES 409 788 1.42 0.74 GT 1.9656 AG 1.3996 1.9697 1328 0
PCDHA11--PCDHAC2 204 11 204.00 9.54 PCDHA11^ENSG00000249158.7 4312 chr5:140871494:+ PCDHAC2^ENSG00000243232.6 11430 chr5:140978949:+ INCL_NON_REF_SPLICE YES 43 788 4.91 0.27 GT 1.7819 AG 1.3996 0.7234 1466 0
PCDHA11--PCDHAC2 8 0 4.00 0.00 PCDHA11^ENSG00000249158.7 3520 chr5:140870702:+ PCDHAC2^ENSG00000243232.6 15440 chr5:141009627:+ INCL_NON_REF_SPLICE YES 409 1175 0.02 0.01 GT 1.9656 AG 1.5219 0.0136 1036 0
DCBLD2--STXBP5L 491 20 491.00 19.99 DCBLD2^ENSG00000057019.16 19629 chr3:98808081:- STXBP5L^ENSG00000145087.13 53865 chr3:121318475:+ ONLY_REF_SPLICE YES 2897 68 0.18 7.42 GT 1.7819 AG 1.9086 1.731 4623 0
DCBLD2--STXBP5L 10 0 10.00 0.00 DCBLD2^ENSG00000057019.16 6588 chr3:98849461:- STXBP5L^ENSG00000145087.13 53865 chr3:121318475:+ ONLY_REF_SPLICE YES 3959 68 0.00 0.16 GT 1.6402 AG 1.9086 0.0339 2425 0
DCBLD2--STXBP5L 2 3 2.00 0.01 DCBLD2^ENSG00000057019.16 19629 chr3:98808081:- STXBP5L^ENSG00000145087.13 56024 chr3:121378716:+ ONLY_REF_SPLICE YES 2897 210 0.00 0.03 GT 1.7819 AG 1.9219 0.0068 2516 0
DCBLD2--STXBP5L 2 0 2.00 0.00 DCBLD2^ENSG00000057019.16 12439 chr3:98817769:- STXBP5L^ENSG00000145087.13 53865 chr3:121318475:+ ONLY_REF_SPLICE YES 2714 68 0.00 0.04 GT 1.7056 AG 1.9086 0.0068 2932 0
DCBLD2--STXBP5L 1 0 1.00 0.00 DCBLD2^ENSG00000057019.16 19629 chr3:98808081:- STXBP5L^ENSG00000145087.13 59861 chr3:121413158:+ ONLY_REF_SPLICE YES 2897 403 0.00 0.00 GT 1.7819 AG 1.8323 0.0034 1311 0
DCBLD2--STXBP5L 1 0 1.00 0.00 DCBLD2^ENSG00000057019.16 1574 chr3:98901122:- STXBP5L^ENSG00000145087.13 53865 chr3:121318475:+ ONLY_REF_SPLICE YES 3908 68 0.00 0.03 GT 1.8256 AG 1.9086 0.0034 2194 0
DCBLD2--STXBP5L 1 0 1.00 0.00 DCBLD2^ENSG00000057019.16 5450 chr3:98881540:- STXBP5L^ENSG00000145087.13 53865 chr3:121318475:+ ONLY_REF_SPLICE YES 2701 68 0.00 0.03 GT 1.7968 AG 1.9086 0.0034 3107 0
DCBLD2--STXBP5L 1 0 1.00 0.00 DCBLD2^ENSG00000057019.16 6588 chr3:98849461:- STXBP5L^ENSG00000145087.13 58435 chr3:121407243:+ ONLY_REF_SPLICE YES 3959 466 0.00 0.00 GT 1.6402 AG 1.7819 0.0034 2628 0
ALK--PTPN3 435 5 435.00 5.00 ALK^ENSG00000171094.18 15377 chr2:29275099:- PTPN3^ENSG00000070159.14 41256 chr9:109457399:- ONLY_REF_SPLICE YES 11 384 36.75 1.15 GT 1.9086 AG 1.7465 1.4905 2315 0
ALK--PTPN3 1 2 1.00 0.00 ALK^ENSG00000171094.18 15377 chr2:29275099:- PTPN3^ENSG00000070159.14 41440 chr9:109457215:- ONLY_REF_SPLICE YES 11 507 0.33 0.01 GT 1.9086 AG 1.8323 0.0034 2314 0
SND1--CFTR 239 3 239.00 2.97 SND1^ENSG00000197157.11 24964 chr7:127991056:+ CFTR^ENSG00000001626.16 75444 chr7:117627522:+ ONLY_REF_SPLICE YES 3496 38 0.07 6.23 GT 1.8295 AG 1.9656 0.8197 1208 0
SND1--CFTR 3 1 3.00 0.01 SND1^ENSG00000197157.11 24964 chr7:127991056:+ CFTR^ENSG00000001626.16 76833 chr7:117642438:+ ONLY_REF_SPLICE YES 3496 94 0.00 0.05 GT 1.8295 AG 1.7465 0.0102 1635 0
SND1--CFTR 1 3 1.00 0.01 SND1^ENSG00000197157.11 27680 chr7:128008144:+ CFTR^ENSG00000001626.16 75444 chr7:117627522:+ ONLY_REF_SPLICE YES 1501 38 0.00 0.13 GT 1.4295 AG 1.9656 0.0034 1360 0
SND1--CFTR 1 1 1.00 0.00 SND1^ENSG00000197157.11 22748 chr7:127929329:+ CFTR^ENSG00000001626.16 75444 chr7:117627522:+ ONLY_REF_SPLICE YES 4060 38 0.00 0.08 GT 1.7819 AG 1.9656 0.0034 992 0
TMED7--TICAM2 220 13 220.00 11.84 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1661 64 0.14 3.60 GT 1.9329 AG 1.6729 0.7854 331 0
TMED7--TICAM2 46 2 46.00 0.32 TMED7^ENSG00000134970.14 4947 chr5:115616318:- TICAM2^ENSG00000243414.6 13166 chr5:115581197:- INCL_NON_REF_SPLICE YES 1661 363 0.03 0.13 GT 1.9329 AG 1.9656 0.1569 213 0
TMED7--TICAM2 8 13 8.00 0.43 TMED7^ENSG00000134970.14 4989 chr5:115616276:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1524 64 0.01 0.34 GC 1.7465 AG 1.6729 0.0286 331 0
TMED7--TICAM2 9 1 9.00 0.04 TMED7^ENSG00000134970.14 3819 chr5:115620435:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- ONLY_REF_SPLICE YES 1700 64 0.01 0.17 GT 1.9656 AG 1.6729 0.0306 1185 0
TMED7--TICAM2 4 13 4.00 0.22 TMED7^ENSG00000134970.14 4993 chr5:115616272:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 1379 64 0.01 0.28 GT 1.8892 AG 1.6729 0.0143 332 0
TMED7--TICAM2 3 13 3.00 0.16 TMED7^ENSG00000134970.14 5119 chr5:115616146:- TICAM2^ENSG00000243414.6 13048 chr5:115581315:- INCL_NON_REF_SPLICE YES 561 64 0.03 0.26 GT 1.5329 AG 1.6729 0.0107 364 0
KATNAL1--ZC3H13 198 0 198.00 0.00 KATNAL1^ENSG00000102781.14 1221 chr13:30307331:- ZC3H13^ENSG00000123200.17 32091 chr13:45989097:- ONLY_REF_SPLICE YES 119 245 1.66 0.81 GT 1.8062 AG 1.7968 0.6707 546 0
KATNAL1--ZC3H13 37 0 37.00 0.00 KATNAL1^ENSG00000102781.14 1612 chr13:30306940:- ZC3H13^ENSG00000123200.17 32091 chr13:45989097:- ONLY_REF_SPLICE YES 132 245 0.29 0.15 GT 1.2729 AG 1.7968 0.1253 286 0
KATNAL1--ZC3H13 21 1 21.00 1.00 KATNAL1^ENSG00000102781.14 1873 chr13:30306679:- ZC3H13^ENSG00000123200.17 32091 chr13:45989097:- INCL_NON_REF_SPLICE YES 158 245 0.14 0.09 GT 1.7232 AG 1.7968 0.0745 322 0
KATNAL1--ZC3H13 9 0 9.00 0.00 KATNAL1^ENSG00000102781.14 1839 chr13:30306713:- ZC3H13^ENSG00000123200.17 32091 chr13:45989097:- ONLY_REF_SPLICE YES 155 245 0.06 0.04 GT 1.9656 AG 1.7968 0.0305 305 0
KATNAL1--ZC3H13 7 0 7.00 0.00 KATNAL1^ENSG00000102781.14 1792 chr13:30306760:- ZC3H13^ENSG00000123200.17 32091 chr13:45989097:- INCL_NON_REF_SPLICE YES 146 245 0.05 0.03 GT 1.9656 AG 1.7968 0.0237 288 0
KATNAL1--ZC3H13 3 0 3.00 0.00 KATNAL1^ENSG00000102781.14 1788 chr13:30306764:- ZC3H13^ENSG00000123200.17 32091 chr13:45989097:- ONLY_REF_SPLICE YES 145 245 0.03 0.02 GT 1.9899 AG 1.7968 0.0102 286 0
AC078846.1--SND1 175 3 175.00 1.02 AC078846.1^ENSG00000273329.1 1269 chr7:129611362:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 17 5153 9.94 0.03 GC 1.6729 AG 1.8892 0.5963 1355 0
AC078846.1--SND1 134 11 134.00 4.04 AC078846.1^ENSG00000273329.1 1313 chr7:129611318:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 19 5153 7.30 0.03 GT 1.5656 AG 1.8892 0.4676 1338 0
AC078846.1--SND1 107 11 107.00 3.23 AC078846.1^ENSG00000273329.1 1310 chr7:129611321:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 20 5153 5.67 0.02 GT 1.5058 AG 1.8892 0.3734 1339 0
AC078846.1--SND1 19 14 19.00 1.28 AC078846.1^ENSG00000273329.1 5675 chr7:129606956:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 1 5153 17.00 0.01 GT 1.9656 AG 1.8892 0.0687 2376 0
AC078846.1--SND1 18 14 18.00 1.21 AC078846.1^ENSG00000273329.1 5935 chr7:129606696:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 15 5153 2.06 0.01 GC 1.9329 AG 1.8892 0.0651 2345 0
AC078846.1--SND1 15 14 15.00 1.01 AC078846.1^ENSG00000273329.1 5551 chr7:129607080:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 1 5153 15.00 0.01 GT 1.7465 AG 1.8892 0.0542 2399 0
AC078846.1--SND1 10 13 10.00 0.54 AC078846.1^ENSG00000273329.1 1562 chr7:129611069:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 1 5153 12.00 0.00 GT 1.5219 AG 1.8892 0.0357 1268 0
AC078846.1--SND1 8 14 8.00 0.54 AC078846.1^ENSG00000273329.1 5743 chr7:129606888:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 1 5153 11.50 0.00 GT 1.9329 AG 1.8892 0.0289 2365 0
AC078846.1--SND1 7 16 7.00 1.60 AC078846.1^ENSG00000273329.1 7635 chr7:129604996:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 6 5153 3.43 0.00 GC 1.9899 AG 1.8892 0.0291 2540 0
AC078846.1--SND1 10 0 10.00 0.00 AC078846.1^ENSG00000273329.1 1211 chr7:129611420:- SND1^ENSG00000197157.11 17125 chr7:127694924:+ INCL_NON_REF_SPLICE YES 10 6424 1.00 0.00 GC 1.9656 AG 1.9656 0.0339 1466 0
AC078846.1--SND1 5 16 5.00 1.14 AC078846.1^ENSG00000273329.1 6973 chr7:129605658:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 5 5153 3.67 0.00 GT 1.9086 AG 1.8892 0.0208 2357 0
AC078846.1--SND1 3 15 3.00 0.40 AC078846.1^ENSG00000273329.1 6631 chr7:129606000:- SND1^ENSG00000197157.11 17029 chr7:127694828:+ INCL_NON_REF_SPLICE YES 6 5153 2.71 0.00 GT 1.6895 AG 1.8892 0.0116 2332 0
TRMT61B--ALK 159 2 159.00 1.27 TRMT61B^ENSG00000171103.11 1731 chr2:28869579:- ALK^ENSG00000171094.18 22621 chr2:29297057:- ONLY_REF_SPLICE YES 181 22 0.89 7.04 GT 1.7465 AG 1.9329 0.5429 5174 0
TRMT61B--ALK 82 2 82.00 0.66 TRMT61B^ENSG00000171103.11 2834 chr2:28865017:- ALK^ENSG00000171094.18 22621 chr2:29297057:- ONLY_REF_SPLICE YES 185 22 0.46 3.70 GT 1.9086 AG 1.9329 0.28 5388 0
TRMT61B--ALK 6 2 6.00 0.05 TRMT61B^ENSG00000171103.11 1750 chr2:28869560:- ALK^ENSG00000171094.18 22621 chr2:29297057:- INCL_NON_REF_SPLICE YES 177 22 0.05 0.39 GT 1.7819 AG 1.9329 0.0205 5176 0
TRMT61B--ALK 3 2 3.00 0.02 TRMT61B^ENSG00000171103.11 1648 chr2:28869662:- ALK^ENSG00000171094.18 22621 chr2:29297057:- INCL_NON_REF_SPLICE YES 166 22 0.04 0.26 GT 1.9086 AG 1.9329 0.0103 5167 0
PCDHGA2--PCDHGA9 152 0 25.33 0.00 PCDHGA2^ENSG00000081853.15 3636 chr5:141341395:+ PCDHGA9^ENSG00000261934.2 12112 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 4 153.00 30.60 GT 1.9656 AG 1.3383 0.0858 1151 0
PCDHGA2--PCDHGB6 152 0 25.33 0.00 PCDHGA2^ENSG00000081853.15 3636 chr5:141341395:+ PCDHGB6^ENSG00000253305.2 14145 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 22 153.00 6.65 GT 1.9656 AG 1.3383 0.0858 1399 0
PCDHGA2--PCDHGB7 152 0 25.33 0.00 PCDHGA2^ENSG00000081853.15 3636 chr5:141341395:+ PCDHGB7^ENSG00000254122.3 12329 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 2 153.00 51.00 GT 1.9656 AG 1.3383 0.0858 1503 0
PCDHGA2--PCDHGC3 152 0 25.33 0.00 PCDHGA2^ENSG00000081853.15 3636 chr5:141341395:+ PCDHGC3^ENSG00000240184.7 12393 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 711 153.00 0.21 GT 1.9656 AG 1.3383 0.0858 2186 0
PCDHGA2--PCDHGC4 152 0 25.33 0.00 PCDHGA2^ENSG00000081853.15 3636 chr5:141341395:+ PCDHGC4^ENSG00000242419.5 12337 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 15 153.00 9.56 GT 1.9656 AG 1.3383 0.0858 1439 0
PCDHGA2--PCDHGC5 152 0 25.33 0.00 PCDHGA2^ENSG00000081853.15 3636 chr5:141341395:+ PCDHGC5^ENSG00000240764.4 12393 chr5:141494807:+ INCL_NON_REF_SPLICE YES 0 75 153.00 2.01 GT 1.9656 AG 1.3383 0.0858 1075 0
AC005993.1--RGS6 89 2 89.00 2.00 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 1 19 46.00 4.60 GT 1.6402 AG 1.9086 0.3083 3057 0
AC005993.1--RGS6 71 0 71.00 0.00 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 2 19 24.00 3.60 GT 1.9656 AG 1.9086 0.2405 4013 0
AC005993.1--RGS6 55 0 55.00 0.00 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 19 56.00 2.80 GT 1.8892 AG 1.9086 0.1863 1167 0
AC005993.1--RGS6 18 0 18.00 0.00 AC005993.1^ENSG00000266869.2 4837 chr14:71908430:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 19 19.00 0.95 GT 1.8892 AG 1.9086 0.061 1167 0
AC005993.1--RGS6 3 0 3.00 0.00 AC005993.1^ENSG00000266869.2 6755 chr14:71910652:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 0 19 4.00 0.20 GT 1.7465 AG 1.9086 0.0102 2118 0
AC005993.1--RGS6 2 0 2.00 0.00 AC005993.1^ENSG00000266869.2 6755 chr14:71910652:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 0 48 3.00 0.06 GT 1.7465 AG 1.8323 0.0068 1773 0
AC005993.1--RGS6 1 0 1.00 0.00 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 19157 chr14:72454528:+ ONLY_REF_SPLICE YES 0 97 2.00 0.02 GT 1.8892 AG 1.9656 0.0034 1721 0
AC005993.1--RGS6 1 0 1.00 0.00 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 0 48 2.00 0.04 GT 1.8892 AG 1.8323 0.0034 142 0
AC005993.1--RGS6 1 0 1.00 0.00 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 1 48 1.00 0.04 GT 1.6402 AG 1.8323 0.0034 2045 0
PTPN3--ALK 84 1 84.00 1.00 PTPN3^ENSG00000070159.14 2250 chr9:109463297:- ALK^ENSG00000171094.18 51926 chr2:29275496:- ONLY_REF_SPLICE YES 386 59 0.22 1.43 GT 1.7819 AG 1.9086 0.288 2554 0
TVP23C--CDRT4 69 1 69.00 0.57 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- INCL_NON_REF_SPLICE YES 92 17 0.76 3.94 GT 1.9329 AG 1.9899 0.2356 1215 0
TVP23C--CDRT4 47 1 47.00 0.39 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 114 17 0.43 2.72 GT 1.9086 AG 1.9899 0.1605 1774 0
TVP23C--CDRT4 9 0 9.00 0.00 TVP23C^ENSG00000175106.17 14926 chr17:15503098:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- INCL_NON_REF_SPLICE YES 92 42 0.11 0.23 GT 1.9329 AG 1.6402 0.0305 137 0
TVP23C--CDRT4 6 1 6.00 0.05 TVP23C^ENSG00000175106.17 12676 chr17:15516419:- CDRT4^ENSG00000239704.11 22624 chr17:15440285:- ONLY_REF_SPLICE YES 25 17 0.31 0.44 GT 1.8892 AG 1.9899 0.0205 1949 0
TVP23C--CDRT4 5 0 5.00 0.00 TVP23C^ENSG00000175106.17 6853 chr17:15545785:- CDRT4^ENSG00000239704.11 23702 chr17:15438200:- ONLY_REF_SPLICE YES 114 42 0.05 0.14 GT 1.9086 AG 1.6402 0.0169 697 0
TLK2--LINC01347 65 0 63.49 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ LINC01347^ENSG00000214837.8 41405 chr1:243097299:- ONLY_REF_SPLICE YES 571 49 0.12 1.32 GT 1.8892 AG 1.8892 0.2151 1623 0
PTCH1--LUC7L2 51 0 51.00 0.00 PTCH1^ENSG00000185920.16 5449 chr9:95506407:- LUC7L2^ENSG00000146963.18 47136 chr7:139376062:+ ONLY_REF_SPLICE YES 56 1407 0.91 0.04 GT 1.6729 AG 1.9656 0.1728 1124 0
PTCH1--LUC7L2 1 0 1.00 0.00 PTCH1^ENSG00000185920.16 5449 chr9:95506407:- LUC7L2^ENSG00000146963.18 45475 chr7:139374401:+ ONLY_REF_SPLICE YES 56 1314 0.04 0.00 GT 1.6729 AG 1.7968 0.0034 978 0
COX7A2L--MAP4K3 24 0 24.00 0.00 COX7A2L^ENSG00000115944.15 16383 chr2:42333667:- MAP4K3^ENSG00000011566.15 30938 chr2:39315388:- INCL_NON_REF_SPLICE YES 3 430 6.25 0.06 GT 1.5656 AG 1.7465 0.0813 2144 0
COX7A2L--MAP4K3 13 0 13.00 0.00 COX7A2L^ENSG00000115944.15 8717 chr2:42361090:- MAP4K3^ENSG00000011566.15 30938 chr2:39315388:- ONLY_REF_SPLICE YES 913 430 0.02 0.03 GT 1.8892 AG 1.7465 0.044 5650 0
COX7A2L--MAP4K3 3 0 3.00 0.00 COX7A2L^ENSG00000115944.15 11833 chr2:42353212:- MAP4K3^ENSG00000011566.15 30938 chr2:39315388:- ONLY_REF_SPLICE YES 1192 430 0.00 0.01 GT 1.9086 AG 1.7465 0.0102 3186 0
TLK2P1--AC110079.1 23 0 17.51 0.00 TLK2P1^ENSG00000226049.3 1830 chr17:34039043:- AC110079.1^ENSG00000260404.3 8316 chr4:118595912:+ INCL_NON_REF_SPLICE YES 32 36 0.73 0.65 GT 1.7465 AG 1.8892 0.0593 311 0
DELEC1--SENP7 21 0 21.00 0.00 DELEC1^ENSG00000173077.16 9192 chr9:115087454:+ SENP7^ENSG00000138468.16 35354 chr3:101459052:- ONLY_REF_SPLICE YES 0 175 22.00 0.12 GT 1.9329 AG 1.8323 0.0711 3579 0
DELEC1--SENP7 12 0 12.00 0.00 DELEC1^ENSG00000173077.16 8077 chr9:115084383:+ SENP7^ENSG00000138468.16 35354 chr3:101459052:- ONLY_REF_SPLICE YES 1038 175 0.01 0.07 GT 1.9329 AG 1.8323 0.0407 2464 0
SENP7--STX17-AS1 17 0 17.00 0.00 SENP7^ENSG00000138468.16 10429 chr3:101366430:- STX17-AS1^ENSG00000255145.3 33022 chr9:99895005:- ONLY_REF_SPLICE YES 74 0 0.24 18.00 GT 1.9086 AG 1.9329 0.0576 4194 0
GPT2--ZNF646 12 0 12.00 0.00 GPT2^ENSG00000166123.14 1597 chr16:46884958:+ ZNF646^ENSG00000167395.10 29133 chr16:31082971:+ ONLY_REF_SPLICE YES 625 294 0.02 0.04 GT 1.8323 AG 1.7819 0.0407 145 0
GPT2--ZNF646 2 0 2.00 0.00 GPT2^ENSG00000166123.14 1597 chr16:46884958:+ ZNF646^ENSG00000167395.10 22408 chr16:31076246:+ ONLY_REF_SPLICE YES 625 84 0.00 0.04 GT 1.8323 AG 1.6729 0.0068 486 0
PTCH1--FMC1 11 1 11.00 1.00 PTCH1^ENSG00000185920.16 5449 chr9:95506407:- FMC1^ENSG00000164898.13 45098 chr7:139345501:+ ONLY_REF_SPLICE YES 56 305 0.23 0.04 GT 1.6729 AG 1.8892 0.0407 757 0
APLP2--LRRC4C 9 0 9.00 0.00 APLP2^ENSG00000084234.18 2258 chr11:130070082:+ LRRC4C^ENSG00000148948.8 31342 chr11:41223008:- ONLY_REF_SPLICE YES 3266 0 0.00 10.00 GT 1.9086 AG 1.7232 0.0305 3631 0
PCDHA11--PCDHAC1 8 0 4.00 0.00 PCDHA11^ENSG00000249158.7 3520 chr5:140870702:+ PCDHAC1^ENSG00000248383.5 14714 chr5:141009627:+ INCL_NON_REF_SPLICE YES 409 961 0.02 0.01 GT 1.9656 AG 1.5219 0.0136 1036 0
98 rows