Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/89/58912d641415af4ca89696f8eff766/A673_FFPE_RNA_0001_B23LG7FLT4_2.infer_experiment.txt Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/1fd8a14d4053aff69e91124ac60f67/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/1fd8a14d4053aff69e91124ac60f67/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d3/596cd17d9de03b401584aff9df11b0/A673_FFPE_RNA_0001_B23LG7FLT4_2.bam_stat.txt ==> STAGING COMPLETE (4 inputs) Wrote A673_FFPE_RNA_0001_B23LG7FLT4_2_rseqc_extra_mqc.tsv unique_reads: 569,347,845 frac_antisense: 0.9105