#!/bin/bash -euo pipefail
agat_convert_sp_gff2tsv.pl \
    --gff A673_FFPE_RNA_0001_B23LG7FLT4_2.gtf \
    --output A673_FFPE_RNA_0001_B23LG7FLT4_2.tsv \


cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV":
    agat: $(agat_convert_sp_gff2tsv.pl --help | sed '3!d; s/.*v//' | sed 's/ .*//')
END_VERSIONS