NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (BreastNB_FFPE_L01_RNA_01_B23LG7FLT4_1) - dev_rna_exp0008_exp0011-e7be3c7a_b - Workflow Tracker

Runs
dev_rna_exp0..-e7be3c7a_b
Tasks
GATK4_MARKDUPLICATES (BreastNB_FFPE_L01_RNA_01_B23LG7FLT4_1)

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Task Info

Status: succeeded
Hash: 139ad35d7b13
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: BreastNB_FFPE_L01_RNA_01_B23LG7FLT4_1
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: 6c/7011b0
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/6c/7011b0e6abc29d062de47eb63b19ce
Native ID: nf-6c7011b0e6abc29d062de47eb63b19ce-27e9e

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 51.6 GB / 74.0 GB
Process I/O (rchar / wchar): 5.9 GB / 3.5 GB
Disk I/O (read / write): - / 3.5 GB
Host: i-01baf003554cd2cfa ( spot)

Runtime

Submitted: May 28, 2026 1:19:46 PM
Completed: May 28, 2026 1:28:44 PM
Total Duration: 8m 57s

Phases

Queue: 3s
Execution: 8m 32s
Stage/Unstage: 22s