Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/83c6c00f5d79cee35f45e578a98b3a/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/57/0e875cb50de5e926b2780a973f1280/786-O_FFPE_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/cb/83c6c00f5d79cee35f45e578a98b3a/.command.run Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2e/0a564da64801430f766c7668398f5b/786-O_FFPE_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam ==> STAGING COMPLETE (4 inputs) [W::hts_idx_load3] The index file is older than the data file: 786-O_FFPE_RNA_0001_B23LG7FLT4_2.Aligned.sortedByCoord.out.bam.bai Load BAM file ... Done