#!/bin/bash -euo pipefail
rseqc_to_multiqc.py \
    --bam-stat A549_FFPE_01_RNA_0001_B23LG7FLT4_2.bam_stat.txt \
    --infer-experiment A549_FFPE_01_RNA_0001_B23LG7FLT4_2.infer_experiment.txt \
    --sample-id A549_FFPE_01_RNA_0001_B23LG7FLT4_2 \
    -o A549_FFPE_01_RNA_0001_B23LG7FLT4_2_rseqc_extra_mqc.tsv

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:RSEQC_TO_MULTIQC":
    python: $(python3 --version | sed 's/Python //g')
    rseqc_to_multiqc: 1.0.0
END_VERSIONS